Mycorrhizal inoculation of pecan seedlings  
with some marketable truffles

GIAN MARIA NICCOLÒ BENUCCI¹, GREGORY BONITO², LEONARDO BACIARELLI 
FALINI¹, MATTIA BENCIVENGA¹ and DOMIZIA DONNINI¹

1Department of Applied Biology, University of Perugia, Borgo XX Giugno 74 
I-06121 Perugia, gian.benucci@gmail.com 

²Biology Department, Duke University, Durham, NC 27708, USA

Benucci G.M.N., Bonito G., Baciarelli Falini L., Bencivenga M., Donnini D.: Mycorrhizal 
inoculation of pecan seedlings with some marketable truffles. Acta Mycol. 47 (2): 179–184, 2012.

Pecan is the common name of Carya illinoinensis (Wangenh.) K. Koch, an ectomycorrhizal 
tree native to North America, also frequently known as hickory. Mycorrhizal inoculations of 
pecan seedlings with: Tuber aestivum Vittad., T. borchii Vittad., T. indicum Cooke & Massee, 
and T. lyonii Butters are described and discussed.
Key words: Carya illinoinensis, truffle spore-slurry, multi-cropping, Tuber borchii, T. aestivum, 
T. indicum, T. lyonii

INTRODUCTION

Pecan is the common name of Carya illinoinensis (Wangenh.) K. Koch, also fre-
quently known as hickory. It is a deciduous tree in the Juglandaceae family with pin-
nately compound leaves, which produces large and economically valuable nuts. This 
tree also establishes ectomycorrhizal (ECM) associations with hypogeous and epi-
geous fungi. Pecan is native to North America and grows naturally on the moist bot-
tomland habitat along streams in the USA ranging from Indiana south to Kentucky 
and Alabama and from Iowa south to Texas, principally along the Mississippi river.

This species is cultivated largely in southeastern North America exclusively for 
the edible nuts, which are used for pecan pie, pecan pralines or food products in-
cluding cereals, energy bars and candy bars. Pecan production of the United States 
it is likely to be over 433 million dollar per year, and the industry is in a period of 
growth (USDA 2008). A large proportion of pecan harvests are being exported to 
China, a rapidly growing market. Large productive commercial pecan orchards have 
also been recently established in Brazil, Israel, and Australia (Wakeling et al. 2001).

 ACTA MYCOLOGICA
 Vol. 47 (2): 179–184
 2012



180 G.M.N. Benucci et al. 

In the late 1980’s Hanlin and colleagues (1989) discovered truffles fruiting natu-
rally in pecan orchards in Georgia, USA. Bonito and colleagues (2011) followed up 
on this study and showed that the ECM truffle genus Tuber (Pezizaceae) is naturally 
abundant in fungal communities of many pecan orchards in Georgia, including the 
species Tuber lyonii Butters, whose ascocarps are frequently found and collected. 
Although T. lyonii is sold and served in US restaurant with success, the market is still 
underdeveloped because of its low organoleptic qualities, low availability and low 
quality of truffles collected (Bonito et al. 2011; Benucci et al. 2012a). Truffles are 
harvested by raking, then mature and less aromatic immature truffles are marketed 
spreading a negative opinion on the product.

MATERIAL AND METHODS

To overcome these problems and evaluate whether pecan can associate with both 
native and non-native truffle species as first step of future potential multi-cropping 
of pecans and truffles, some investigation on ECM inoculations with Tuber spp. on 
pecan have been realized (Bonito et al. 2010; Bonito et al. 2011; Benucci et al. 2012a; 
Bonito et al. 2012). Spore inocula were prepared with appreciated and widely dis-
tributed truffle species: Tuber aestivum Vittad., Tuber borchii Vittad., Tuber indicum 
Cooke & Massee, Tuber macrosporum Vittad. and Tuber lyonii Butters. 

After inoculations with spore slurries, pecan seedlings were grown in greenhouse 
conditions for several months (Fig. 1a), after which plants were harvested and myc-
orrhization levels quantified visually (Bencivenga et al. 1995). ECM were described 
morpho-anatomically and molecularly by species-specific polymerase chain reac-
tions (PCRs) (Mello et al. 1999; Mello et al. 2002) and/or by sequencing and analyz-
ing the internal transcribed spacer (ITS) (White 1990) and 28S large subunit (LSU) 
(Vilgalys, Hester 1990) nuclear ribosomal DNA (nrDNA) region.

RESULTS

Tuber borchii and T. aestivum formed abundant ECM on pecan (Fig. 1c, 1e), with 
≈60% and ≈40% root-tip colonization, respectively (Benucci et al. 2012a). In 
contrast, no ECM of T. macrosporum were detected on pecan, which may indicate 
that this host is not compatible with this fungal species, although it is known that 
T. macrosporum ECM are difficult to obtain under laboratory and nursery conditions 
(Benucci et al. 2012b). Morphological and anatomical characteristics of T. borchii 
and T. aestivum on pecan have similar features to those that they display with other 
host species (e.g., oak, hazelnut), and their morphologies are consistent with pre-
vious reports (Giomaro et al. 2000; Granetti et al. 2005). In particular, T. borchii 
possessed straight needle-shaped cystidia and puzzle-like cell pattern (Fig. 1g, 
1h), while T. aestivum possessed curly cystidia and angular cell pattern (Fig. 1f, 1i). 



 Mycorrhizal inoculation 181

Fig. 1. Pecan seedlings and morphology of T. aestivum, T. borchii, T. indicum and T. lyonii 
ECM. (a) Pecan seedlings in the nursery; (b) T. lyonii ECM on pecan roots (scale bar=700 
μm); (c) T. borchii ECM on pecan roots (scale bar=700 μm); (d) T. indicum ECM on pecan 
roots (scale bar=700 μm); (e) T. aestivum ECM on pecan roots (scale bar=700 μm); (f) curly 
cystidia of T. aestivum ECM (scale bar=30 μm); (g) outer mantle layer of T. borchii ECM 
(scale bar=30 μm); (h) needle-shape cystidia of T. borchii (scale bar=30 μm); (i) outer mantle 
layer of T. aestivum ECM (scale bar=30 μm); (j) outer mantle layer of T. lyonii ECM (scale 
bar=30 μm).



182 G.M.N. Benucci et al. 

The molecular PCR assay confirmed that amplicons obtained from truffle ECM are 
consistent with our morphological and taxonomical assessment. Their ITS nrDNA 
sequences matched at 100% query coverage with 0.0 E-values and 99-100% identity 
to those present in GenBank for the same fungal species.

Bonito and colleagues (2010) were able to synthesize T. indicum ECM on Car-
ya illinoinensis seedlings using standard inoculation methods. The identification of 
ECM was confirmed by morphology (Fig. 1d) and ITS sequence data. ECM pro-
duced by T. indicum on pecan were unramified to irregularly pinnate, dark amber in 
colour and showed characteristic puzzle-like pseudoparenchyma cells in the outer 
mantle with emanating right-angle branching cystidia, as reported from other hosts 
(Geng et al. 2009).

Tuber lyonii ECM were also well formed on pecan seedlings 6 months after they 
had been inoculated with T. lyonii spores (Bonito et al. 2011). Ectomycorrhizas 
are characterized by a thin and smooth mantle with epidermoid puzzle-like cells 
(Fig. 1b, 1j). Molecular ITS sequences confirmed the identity of T. lyonii ECM.

DISCUSSION

Together these data demonstrate that European, Asian and American truffles are 
able to form healthy ECM on pecan, regardless of the fact that this plant is endemic 
to North America. These studies lead us to conclude that there is the potential to 
multi-crop various truffle species with pecan. To successfully cultivate pecan with 
the simultaneous production of truffles represents a unique opportunity to diversify 
agricultural outputs from a given tract of land, and to add extra income in an envi-
ronmental and sustainable way (Benucci et al. 2013; Donnini et al. 2013).

Furthermore, given the attributes of pecan wood for lumber and flooring, op-
portunities exist to obtain additional revenue streams from the timber production 
at the end of the cultivation cycle or following stand thinning (Benucci et al. 2012a). 
In US, although some orchards were originally brought for lumber and furniture, 
most pecan trees taken out are chipped and used for smoking meats in fires and tra-
ditional barbeques. However, the wood is quite dense, making it hard on saw blades 
of modern mill equipment, and transport costs are high. Nonetheless, once CO2 is 
regulated in the US, we expect more sustainable practices will develop and pecan 
wood and timber will be favored again for flooring and furniture.

CONCLUSIONS

In conclusion, given the ability of pecan to readily for ECM with economic truffle 
species from five different clades Tuber that includes North American, European, 
and Asian truffle species, pecan holds promise as a host plant that is compatible 
with the co-cropping of truffles and nuts. Whether or not Tuber ECM are maintained 



 Mycorrhizal inoculation 183

when mycorrhized seedlings are planted out in an orchard setting, and whether these 
truffle species will fruit with pecan still need to be addressed however. Moreover, in 
humid climates pecan cultivation often requires heavy inputs of biocides to combat 
plant diseases and inputs of fertilizers to boost the production of nuts. Further stud-
ies are needed to address the potential accumulation of these harmful substances 
inside of truffles.

Acknowledgements. Suggestions and critical comments on the manuscript made by anonymous reviewers 
are greatly acknowledged. The authors are grateful to Andrea Vece and Andrea Gógán Csorbainé, who 
provided part of the truffles needed for mycorrhization trials.

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