item: #1 of 143 id: aiol-10017 author: Riccioni, Giulia; Domaizon, Isabelle ; Gandolfi, Andrea; Pindo, Massimo; Boscaini, Adriano; Vautier, Marine; Rund, Hans; Hufnagl, Peter; Dobrovolny, Stefanie; Vasselon, Valentin; Bylemans, Jonas; Tang, Cuong Q. ; Salmaso, Nico; Wanzenböck, Josef title: Alpine freshwater fish biodiversity assessment: an inter-calibration test for metabarcoding method set up date: 2022-07-18 words: 8550 flesch: 59 summary: We used one individual per fish species to set up these three mock samples. The two laboratories performed all PCRs in the pres- ence of both a negative and a positive control (i.e., a mock community with a known composition of fish species). keywords: 12s; abramis; abundance; alpine; analyses; approach; aquatic; assessment; assignment; barbatula; barbus; biodiversity; bioinformatic; biol; biomonitoring; bourget; brama; calibration; carpio; cephalus; cia; communities; community; composition; control; coregonus; cyprinus; database; detection; different; dna; ecol; ecosystems; edna; edna metabarcoding; environmental; environmental dna; errors; esox; et al; european; figure; fish; fish species; fluviatilis; fragment; freshwater; genus; gibbosus; gobio; good; high; hts; identification; individual; inter; lab_b; laboratories; lake; lake bourget; lepomis; leuciscus; level; low; lucius; m14; metabarcoding; methods; mock; mock samples; mol; mykiss; number; oncorhynchus; pcr; perca; presence; present; primers; proportions; protocols; quality; rdna; reads; reference; regression; results; riccioni; rivers; rutilus; salmo; salvelinus; samples; sampling; sci; sequences; sequencing; silurus; similarity; species; squalius; study; table; tanks; taxonomic; test; throughput; tinca; tissue; total; traditional; trutta; water cache: aiol-10017.pdf plain text: aiol-10017.txt item: #2 of 143 id: aiol-11033 author: Marrone, Federico; Naselli-Flores, Luigi title: A century of research on micro-organisms from the inland waters of the largest Mediterranean island date: 2022-12-27 words: 9409 flesch: 57 summary: More than one century has passed since the first stud- ies on micro-organisms inhabiting Sicilian inland waters, and our knowledge of their diversity and distribution has greatly increased. However, from a geographical point of view, Sicily is part of the southern European border, and an important bio- geographical crossroad between subtropical and temper- ate areas, and the Eastern and Western part of the Mediterranean Basin; accordingly, the biological study of Sicilian inland waters might allow to better understand the dispersal and distribution patterns of several Mediter- ranean species (e.g., Marrone et al., 2009). keywords: alfonso; analysis; aquatic; arculeo; atti; available; barone; barone et; barone r; beginning; berzins; biodiversity; biogeography; biological; biviere; bodies; bollettino; borzì; botanico; brackish; bruni; calanoida; calvo; castelli; century; checklist; chemical; cia; cia l; climate; community; copepoda; crustacea; cyanobacteria; dam; data; date; del; della; description; diaptomidae; different; distribution; diversity; dynamics; ecology; eds; end; et al; factors; faranda; faro; fauna; federico; fisiche; fitoplancton; flores; flores et; flores l; fontaneto; freshwater; genovese; genus; giuffrè; groups; hutchinson; hydrobiologia; information; inland; inland waters; international; inventory; investigations; islands; italian; italy; journal; knowledge; l u; lago; lake; largest; lentini; level; limnology; literature; luigi; marrone; marrone f; matematiche; mediterranean; meromictic; messina; micro; microcrustaceans; microscopic; molecular; moniez; mountain; naselli; naturalista; nco; nel; new; northern; number; occurrence; oceanography; organisms; osservazioni; palermo; paper; patterns; peloritana; pergusa; permanent; pesce; phytoplankton; ponds; population; record; related; research; reservoirs; review; river; rotifers; saline; sampling; scientists; scienze; series; shallow; sicilian; sicilian inland; sicily; small; società; southern; species; state; stoch; structure; studies; study; sulphur; surface; taxonomic; temperate; temporary; und; vecchioni; waters; work; years; zooplankton cache: aiol-11033.pdf plain text: aiol-11033.txt item: #3 of 143 id: aiol-11051 author: Zaupa, Silvia; Fontaneto, Diego; Sabatino, Raffaella; Boggero, Angela title: Building a local reference library for metabarcoding survey of lake macrobenthos: oligochaetes and chironomids from Lake Maggiore date: 2022-12-27 words: 484 flesch: -346 summary: 0.09 KY369673_1_Limnodrilus_hoffmeisteriIX_CNAS51 LN810312_1_Limnodrilus_hoffmeisteriT20_262 KY369721_1_Limnodrilus_hoffmeisteriVI_CNL75 KY369719_1_Limnodrilus_hoffmeisteriVI_CNL59 KY369605_1_Limnodrilus_hoffmeisteriX_CE10835 KY369581_1_Limnodrilus_hoffmeisteriVII_CE8600 KY369627_1_Limnodrilus_hoffmeisteriIX_CE22811 LN999364_1_Limnodrilus_hoffmeisteri668_T17 LN999368_1_Limnodrilus_hoffmeisteri673_T21 KY369687_1_Limnodrilus_hoffmeisteriVI_CNH19 KY369543_1_Limnodrilus_hoffmeisteriVIII_CE4295 KY369481_1_Limnodrilus_hoffmeisteriIX_CE1843 MT450682_1_Limnodrilus_hoffmeisteri_CW0017 LN810411_1_Limnodrilus_hoffmeisteriT18_264 9450_Limnodrilus_hoffmeisteri LN999324_1_Limnodrilus_hoffmeisteri617_T21 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ln810402_1_limnodrilus_hoffmeisterit17_326; ln999081_1_limnodrilus_hoffmeisteri379_t19; ln999081_1_limnodrilus_hoffmeisteri379_t19 lt899885_1_limnodrilus_hoffmeisteri792_t18; ln999316_1_limnodrilus_hoffmeisteri_608_t17; lr025081_1_limnodrilus_hoffmeisteri1145_t17; lt598635_1_limnodrilus_hoffmeisteri935; lt598635_1_limnodrilus_hoffmeisteri935 ln810402_1_limnodrilus_hoffmeisterit17_326; lt899867_1_limnodrilus_hoffmeisteri842_t20; lt903809_1_limnodrilus_hoffmeisteri1001_t17; lt905367_1_limnodrilus_hoffmeisteri754_t17 lt598635_1_limnodrilus_hoffmeisteri935; lt905376_1_limnodrilus_hoffmeisteri766_t18; mf125273_1_limnodrilus_hoffmeisteri; mk393321_1_limnodrilus_hoffmeisteri_tsjm461; mn294954_1_limnodrilus_hoffmeisteri_ban_d9; mn961663_1_limnodrilus_hoffmeisteri_wa12; mt324115_1_limnodrilus_hoffmeisteri_bioug43944; mt450682_1_limnodrilus_hoffmeisteri_cw0017; mt450682_1_limnodrilus_hoffmeisteri_cw0017 ln810411_1_limnodrilus_hoffmeisterit18_264; om323983_1_limnodrilus_hoffmeisteriiii_bsp1 cache: aiol-11051.pdf plain text: aiol-11051.txt item: #4 of 143 id: aiol-11054 author: Savoca, Serena; Di Fresco, Dario; Alesci, Alessio; Capillo, Gioele; Spanò, Nunziacarla title: Mucus secretions in Cnidarian, an ecological, adaptive and evolutive tool date: 2022-12-29 words: 21396 flesch: 56 summary: Outbreaks of jellyfish have caused con- cern about their potential harm to human welfare, tourism, and fisheries (Graham et al., 2014). Even though jellyfish can have a low nutritional value com- pared to other prey items (Doyle et al., 2007), consumption of sufficient quantities can sustain large predators. keywords: a.g; ability; abundance; acropora; activity; adaptive; algae; ames; anthozoans; antimicrobial; aquatic; arai; aspects; associated; aurelia; aurita; authors; available; bacteria; bakshani; barrier; benthic; biol; biology; bleaching; blooms; body; bourne; branch; brown; bythell; carbon; case; cassiopea; cells; change; characteristics; chemical; class; climate; cnidarians; column; communities; community; complex; composition; compounds; conditions; condon; control; coral; coral mucus; crossland; cubozoa; cycle; data; defense; development; different; disease; diversity; doyle; ducklow; dynamics; ecological; ecology; ecosystems; ectoderm; effects; energy; environmental; essential; et al; evidence; evolution; evolutionary; evolutive; example; exp; exposure; external; feeding; ferrier; food; formation; functions; fundamental; future; gastrodermis; gelatinous; global; graham; health; heterotrophic; high; host; hubot; human; hydrobiologia; hydrozoa; immune; immunity; implications; important; increase; influence; innate; inorganic; interactions; invertebrates; j.c; j.e; jellyfish; jellyfish mucus; kayal; kayal et; key; kramar; kramar et; large; layer; life; light; like; loss; ly mucus; mar; marine; matter; mechanisms; mediterranean; medusa; messina; metazoans; microbes; microbial; microbiome; microorganisms; mitchell; model; molecular; mucins; mucocytes; mucus; mucus layer; mucus production; mucus secretion; muscatine; natural; nature; naumann; naumann et; nco; netherlands; nitrogen; noctiluca; non; number; nutrient; nutritional; oceanogr; organic; organisms; pagès; palmer; particles; pathogens; pelagic; photosynthetic; phylogenetic; phylum; physiological; pitt; planktonic; polyp; populations; porites; potential; predators; presence; present; prey; primary; proc; processes; production; prog; properties; purcell; range; recent; recycling; reef; relationships; release; rep; responses; review; ritchie; role; rosenberg; savoca; savoca et; sci; scleractinian; scyphozoa; sea; secretion; sediment; sedimentation; ser; services; significant; single; size; smith; soft; source; species; specific; springer; stabili; stabili et; stafford; stage; strategy; stress; stressors; structure; studies; study; support; surface; symbiosis; symbiotic; taxa; tinta; tinta et; tissues; tool; traits; trap; trends; trophic; understanding; variability; variations; water; wild; wild et; world; zooplankton; zooxanthellae cache: aiol-11054.pdf plain text: aiol-11054.txt item: #5 of 143 id: aiol-11070 author: Bolinesi, Francesco; Serino, Emanuela; Carotenuto, Angelo; Fanina, Silvia; Mangoni, Olga title: Phytoplankton community as monitoring tool in the terminal stretch of a micro-tidal estuary facing the Tyrrhenian Sea date: 2023-08-03 words: 8485 flesch: 59 summary: The construction of an artificial drainage channel (Canale di Bonifacimento) (Alberico et al., 2012a, b), with a dense net of artificial drainage channels and the presence of the Dam of Persano strongly enhanced coastal erosion and altered the river environmental conditions (Alberico et al., 2012a, 2012b; Arienzo et al., 2020; Pappone et al., 2011;). In most recent years, the significant geo- morphological alterations of the Sele estuary and the presence of pollutants and conspicuous loads of organic matter deriving from anthropogenic activities have been documented, along with a pronounced accumulation of allogenic substances under low flow conditions caused by rainfall deficit (Arienzo et al., 2020; Benassai et al., 2015; De Rosa et al., 2022; keywords: analyses; area; arienzo; authors; axis; biomass; blooms; bolinesi; changes; channels; chl; chlorophyll; cia; climate; coastal; column; communities; community; composition; concentration; conditions; contribution; cryptophytes; cyanophytes; data; depth; determination; diatoms; differences; discharge; distribution; drainage; drought; dynamics; ecological; ecology; entire; environmental; estuaries; estuarine; estuary; et al; extent; figure; filters; flow; freshwater; groups; high; highest; human; hydrological; important; inner; italy; journal; july; l-1; large; layer; mangoni; marine; maximum; mean; mediterranean; micro; monitoring; mouth; muylaert; nco; net; newman; no3; nutrient; occluded; periods; phytoplankton; phytoplankton community; pigment; plain; presence; rate; ratios; research; reynolds; river; river mouth; role; salinity; sampling; science; sea; seawater; second; sediments; sele; sele river; shelf; significant; southern; species; station; stratification; stretch; strong; structure; study; surface; systems; temperature; terminal; tidal; time; tool; total; turbidity; tyrrhenian; usa; values; variability; variations; water; μmol cache: aiol-11070.pdf plain text: aiol-11070.txt item: #6 of 143 id: aiol-11079 author: Boero, Ferdinando title: Linking ecosystems, habitats, and biodiversity: from the grand picture to the tiny details, and back date: 2022-12-27 words: 8557 flesch: 63 summary: European reg- ister of marine species: a check-list of the marine species in Europe and a bibliography of guides to their identification. The apparent disappearance of a previously dominant species might not be a tragedy if other species replace it. keywords: alberto; approach; areas; benthic; biodiversity; biology; boero; boero et; boero f; case; change; cia; coastal; column; concepts; cycles; deep; details; different; directive; domains; ecological; ecology; ecosystem; et al; european; evolution; figure; fluxes; food; fraschetti; functioning; future; gennari; good; grand; gravili; habitats; herbivores; historical; holistic; hydrozoa; important; indigenous; jellyfish; juveniles; larvae; life; living; marine; matter; mediterranean; microbes; microbial; music; natural; nco; networks; new; non; nutrients; ocean; organisms; papers; pathway; phytoplankton; picture; plankton; pool; potential; primary; processes; producers; resting; role; sampling; science; sea; single; space; species; stages; status; study; surface; systems; terms; terrestrial; time; tiny; trophic; turn; water; zooplankton cache: aiol-11079.pdf plain text: aiol-11079.txt item: #7 of 143 id: aiol-11094 author: Spagnoli, Federico; Ravaioli, Mariangela title: Dissolved fluxes of nutrients and carbon at the sediment-water interface in the Adriatic Sea: review of early data and methods from the Italian National Research Council (CNR) date: 2023-06-22 words: 11457 flesch: 55 summary: Benthic flux incubation experiments – by means of laboratory incubations (Bertuzzi et al., 1996; Bertuzzi et al., 1997) as well as in situ deployments (Covelli et al., 1999) – were also carried out in the 1990s by the University of Trieste in the Gulf of Trieste. Giordani et al., 1994; Giordani et al., 1996; Hammond et al., 1999; Spagnoli and Bergamini 1997; Tahey et al., 1996; Spagnoli et al., 2010) (Figure S3, Table S1). keywords: acceptors; adriatic; adriatic sea; amerigo; amounts; analysis; anoxic; areas; benthic; benthic chamber; benthic fluxes; bergamini; berner; bertuzzi; biogeochemical; board; box; calculation; carbon; central; chamber; chemical; cia; close; cnr; coastal; column; composition; concentration; conditions; continental; contribution; core; covelli; data; degradation; delta; deposition; depth; dfswis; diagenesis; dic; different; early; electron; environment; estuarine; et al; extraction; faganeli; figure; final; fine; fluxes; frascari; giordani; gradient; greater; gulf; hammond; high; important; incubation; inputs; interface; italian; italy; laboratory; large; local; low; lower; main; mainly; major; manganese; marine; matter; measurements; methods; micro; mineralization; modeling; mouths; nco; near; negative; nh4; nitrogen; northern; northern adriatic; nutrient; organic; oxygen; oxyhydroxides; particulate; phosphate; po river; pore; primary; processes; production; products; profiles; profiling; rate; reactive; research; results; reworking; river; role; rom; s14; samples; science; sea; seafloor; sediment; sedimentation; shallow; shelf; situ; slice; sources; south; spagnoli; spagnoli et; station; strong; stronger; summer; temperature; time; trieste; type; values; water; water column; water interface; western cache: aiol-11094.pdf plain text: aiol-11094.txt item: #8 of 143 id: aiol-11112 author: Pulina, Silvia; Satta, Cecilia Teodora; Padedda, Bachisio Mario; Culurgioni, Jacopo; Diciotti, Riccardo; Fois, Nicola; Lugliè, Antonella title: Dominance of small-sized phytoplankton in a Mediterranean eutrophic coastal lagoon date: 2023-06-20 words: 11437 flesch: 56 summary: Such a relevant presence of Pico in Cabras Lagoon agrees with other studies that have indicated increased Pico presence in other Mediterranean eutrophic coastal lagoons (Bec et al., 2011; Collos et al., 2009; Pulina et al., 2018; Sorokin et al., 2004). A size- based predation has been reported for plankton food chains and it is generally assumed that larger prey is eaten by larger predators: heterotrophic nanoflagellates (cell size <20 μm) feed on picoplankton (cell size <2 μm), microzooplankton (20–200 μm) feed on heterotrophic nanoflagellates and nanoplanktonic phytoplankton, and mesozooplankton (200–2000 μm) feed on microplankton (Peter and Sommer, 2012; Sommer et al., 2017a). keywords: abundance; analyses; annual; anova; autotrophic; autumn; available; biomass; cabras; cabras lagoon; carbon; cell; cell density; cell size; cell volume; changes; cia; ciliates; class; coastal; coastal lagoon; communities; community; composition; contribution; copepods; data; density; differences; different; dominance; dynamics; ecological; ecosystems; effects; energy; environmental; et al; eutrophic; figure; fixed; flow; food; fraction; grazing; group; higher; italy; l-1; lagoon; larger; linear; linear cell; lower; marine; maximum; mean; mediophyceae; mediterranean; mesozooplankton; micro; model; nanoflagellates; nco; nh4; no2; no3; nutrient; ocean; october; p<0.001; padedda; pelagic; period; phytoplankton; phytoplankton biomass; phytoplankton cell; pico; pico biomass; picocyanobacteria; picophytoplankton; po4; present; primary; pulina; pulina et; random; results; rotifers; sal; salinity; samples; sampling; sci; seasonal; seasons; significant; sio4; size; small; smaller; species; spring; stations; structure; studies; study; study period; summer; table; taxa; taxon; temperature; temporal; test; total; total phytoplankton; tra; tukey; ufp; ufp biomass; utermöhl; values; variables; volume; warming; water; web; webs; winter; work; years; zooplankton cache: aiol-11112.pdf plain text: aiol-11112.txt item: #9 of 143 id: aiol-11124 author: Magni, Paolo; Gravina, Maria Flavia title: Macrobenthos of lagoon ecosystems: a comparison in vegetated and bare sediments date: 2023-05-19 words: 6526 flesch: 58 summary: As indicated by the SIMPER analysis, most of the species that contributed up to the cumulative 95% were amphipods (M. gryllotalpa, G. aequicauda), isopods (S. serratum, C. carinata), tanaids (T. dulongii) and two bivalves, L. lacteus and A. tenuis (see Currás and Mora, 1996; Holmes et al., 2004), all being characterized by direct development lacking free living Ta bl e 2. R es ul ts o f t w o- w ay P E R M A N O V A a m on g ar ea s an d da te s (p er m ut at io n N : 9 99 9, d f = D eg re es o f F re ed om ). Differently, A. tenuis was dominant in very high numbers in the unvegetated area indicating its ability to maintain a considerable population in confined areas due to its direct development which does not require the marine environment as an external donor (Holmes et al., 2004). keywords: abra; abundance; acuta; aequicauda; analysis; april; areas; assemblages; authors; autumn; average; bare; barnes; beds; biodiversity; biol; capitata; cerithium; changes; chironomidae; cia; coastal; community; como; composition; contribution; cym; cymodocea; data; detritus; differences; different; distribution; e.g.; ecol; ecosystems; environmental; estuar; et al; figure; glaucum; gryllotalpa; higher; importance; intertidal; italy; lagoon; lividulum; local; macrobenthic; macrophyte; magni; magni et; mar; marine; marked; meadows; mean; mediterranean; mistras; mistras lagoon; mix; mixed; nco; nodosa; november; number; october; opportunistic; orbiculatus; oristano; present; replicates; res; richness; rsk; sampling; sardinia; sci; seagrass; seasonal; sediments; shelf; significant; simper; spatial; species; spring; structure; studies; study; system; temporal; tenuis; unv; unvegetated; western cache: aiol-11124.pdf plain text: aiol-11124.txt item: #10 of 143 id: aiol-11613 author: Magni, Paolo; Gravina, Maria Flavia title: Erratum - Macrobenthos of lagoon ecosystems: a comparison in vegetated and bare sediments date: 2023-07-31 words: 495 flesch: 59 summary: Cym vs Unv Average Contribution Cumulative Average Average dissimilarity % % abundance abundance Cym Unv Abra tenuis M 26.91 27.93 27.93 Species category: O, opportunistic; C, common in coastal sheltered waters; B, brackish; M, properly marine. keywords: abra; abundance; average; cym; dissimilarity; mix; unv cache: aiol-11613.pdf plain text: aiol-11613.txt item: #11 of 143 id: aiol-5292 author: None title: Advances in Oceanography and Limnology date: None words: 5 flesch: 32 summary: Advances in Oceanography and Limnology keywords: 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text: aiol-5321.txt item: #33 of 143 id: aiol-5322 author: None title: Advances in Oceanography and Limnology date: None words: 5 flesch: 32 summary: Advances in Oceanography and Limnology keywords: limnology cache: aiol-5322.htm plain text: aiol-5322.txt item: #34 of 143 id: aiol-5323 author: None title: Advances in Oceanography and Limnology date: None words: 5 flesch: 32 summary: Advances in Oceanography and Limnology keywords: limnology cache: aiol-5323.htm plain text: aiol-5323.txt item: #35 of 143 id: aiol-5324 author: None title: Advances in Oceanography and Limnology date: None words: 5 flesch: 32 summary: Advances in Oceanography and Limnology keywords: limnology cache: aiol-5324.htm plain text: aiol-5324.txt item: #36 of 143 id: aiol-5325 author: None title: Advances in Oceanography and Limnology date: None words: 5 flesch: 32 summary: Advances in Oceanography and Limnology keywords: limnology cache: aiol-5325.htm plain text: aiol-5325.txt item: #37 of 143 id: aiol-5326 author: None title: Advances in Oceanography and Limnology date: None words: 5 flesch: 32 summary: Advances in Oceanography and Limnology keywords: limnology cache: aiol-5326.htm plain text: aiol-5326.txt item: #38 of 143 id: aiol-5327 author: None title: Advances in Oceanography and Limnology date: None words: 5 flesch: 32 summary: Advances in Oceanography and Limnology keywords: limnology cache: aiol-5327.htm plain text: aiol-5327.txt item: #39 of 143 id: aiol-5328 author: None title: Advances in Oceanography and Limnology date: None words: 5 flesch: 32 summary: Advances in Oceanography and Limnology keywords: limnology cache: aiol-5328.htm plain text: aiol-5328.txt item: #40 of 143 id: aiol-5329 author: None title: Advances in Oceanography and Limnology date: None words: 5 flesch: 32 summary: Advances in Oceanography and Limnology keywords: limnology cache: aiol-5329.htm plain text: aiol-5329.txt item: #41 of 143 id: aiol-5330 author: None title: Advances in Oceanography and 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item: #54 of 143 id: aiol-5343 author: None title: Advances in Oceanography and Limnology date: None words: 5 flesch: 32 summary: Advances in Oceanography and Limnology keywords: limnology cache: aiol-5343.htm plain text: aiol-5343.txt item: #55 of 143 id: aiol-5344 author: None title: Advances in Oceanography and Limnology date: None words: 5 flesch: 32 summary: Advances in Oceanography and Limnology keywords: limnology cache: aiol-5344.htm plain text: aiol-5344.txt item: #56 of 143 id: aiol-5345 author: None title: Advances in Oceanography and Limnology date: None words: 5 flesch: 32 summary: Advances in Oceanography and Limnology keywords: limnology cache: aiol-5345.htm plain text: aiol-5345.txt item: #57 of 143 id: aiol-5346 author: None title: Advances in Oceanography and Limnology date: None words: 5 flesch: 32 summary: Advances in Oceanography and Limnology keywords: limnology cache: aiol-5346.htm plain text: aiol-5346.txt item: #58 of 143 id: aiol-5347 author: None title: Advances in Oceanography and Limnology date: None words: 5 flesch: 32 summary: Advances in Oceanography and Limnology keywords: limnology cache: aiol-5347.htm plain text: aiol-5347.txt item: #59 of 143 id: aiol-5348 author: None title: Advances in Oceanography and Limnology date: None words: 5 flesch: 32 summary: Advances in Oceanography and Limnology keywords: limnology cache: aiol-5348.htm plain text: aiol-5348.txt item: #60 of 143 id: aiol-5349 author: None title: Advances in Oceanography and Limnology date: None words: 5 flesch: 32 summary: Advances in Oceanography and Limnology keywords: limnology cache: aiol-5349.htm plain text: aiol-5349.txt item: #61 of 143 id: aiol-5350 author: None title: Advances in Oceanography and Limnology date: None words: 5 flesch: 32 summary: Advances in Oceanography and Limnology keywords: limnology cache: aiol-5350.htm plain text: aiol-5350.txt item: #62 of 143 id: aiol-5351 author: None title: Advances in Oceanography and Limnology date: None words: 5 flesch: 32 summary: Advances in Oceanography and Limnology keywords: limnology cache: aiol-5351.htm plain text: aiol-5351.txt item: #63 of 143 id: aiol-5352 author: None title: Advances in Oceanography and Limnology date: None words: 5 flesch: 32 summary: Advances in Oceanography and Limnology keywords: limnology cache: aiol-5352.htm plain text: aiol-5352.txt item: #64 of 143 id: aiol-5353 author: None title: Advances in Oceanography and Limnology date: None words: 5 flesch: 32 summary: Advances in Oceanography and Limnology keywords: limnology cache: aiol-5353.htm plain text: aiol-5353.txt item: #65 of 143 id: aiol-5354 author: None title: Advances in Oceanography and Limnology date: None words: 5 flesch: 32 summary: Advances in Oceanography and Limnology keywords: limnology cache: aiol-5354.htm plain text: aiol-5354.txt item: #66 of 143 id: aiol-5355 author: None title: Advances in Oceanography and Limnology date: None words: 5 flesch: 32 summary: Advances in Oceanography and Limnology keywords: limnology cache: aiol-5355.htm plain text: aiol-5355.txt item: #67 of 143 id: aiol-5356 author: None title: Advances in Oceanography and Limnology date: None words: 5 flesch: 32 summary: Advances in Oceanography and Limnology keywords: limnology cache: aiol-5356.htm plain text: aiol-5356.txt item: #68 of 143 id: aiol-5439 author: Trájer, Attila; Farkas-Iványi, Kinga; Padisák, Judit title: Area-based historical modeling of the effects of the river bank regulation on the potential abundance of eleven mosquito species in the River Danube between Hungary and Slovakia date: 2015-11-26 words: 7280 flesch: 55 summary: It is plausible that the relatively slow and moderate modifications in the fluvial network was less drastical than the construction of the hydropower plan, resulting a gradual change that increased the area and the diversity of water habitats. The effect of river regulation and other hydromorphological modifica- tions such as the disturbance of wetland habitats on the temporal change of mosquito habitats has been a rela- tively neglected topic. keywords: 1830; abundance; aedes; algeriensis; amoros; anopheles; aquatic; area; artificial; atroparvus; bank; basin; bodies; branches; breeding; century; changes; channel; cinereus; claviger; climate; collected; collection; construction; countrywide; culex; danube; data; different; diversity; e.g.; effect; et al; eupotamon; europe; evenness; farkas; fauna; fig; floodplain; habitats; historical; hswa; human; hungary; hyrcanus; increase; lakes; landscape; larvae; level; long; maculipennis; main; malaria; maps; messeae; modestus; mosquito; mosquito species; mosquito vectors; natural; nco; number; nutrient; paleopotamon; parapotamon; pipiens; plesiopotamon; potential; preference; regulation; relative; results; river; river regulation; riverbed; rossicus; shallow; sites; small; species; standing; studied; suitability; suitable; system; szigetköz; term; trájer; types; tóth; values; vectors; vexans; water; years cache: aiol-5439.pdf plain text: aiol-5439.txt item: #69 of 143 id: aiol-5448 author: Pusceddu, Antonio; Bianchelli, Silvia; Danovaro, Roberto title: Quantity and biochemical composition of particulate organic matter in a highly trawled area (Thermaikos Gulf, Eastern Mediterranean Sea) date: 2015-11-16 words: 10413 flesch: 63 summary: Indeed, variations in the concen- tration of POM along the water column, as well as in its biochemical composition, can be the result of biological processes, including among the others primary productiv- ity and particle consumption (Fabiano and Pusceddu, 1998; Fabiano et al., 2001). Particulate bioavailable organic carbon (BAOC), as a proxy of the organic carbon potentially available for con- sumers (Pusceddu et al., 2003, 2009), was defined as the sum of carbon equivalents of hydrolysable carbohydrates and proteins (Danovaro et al., 2001). keywords: activities; al m; analysis; anthropogenic; b b; benthic; bioavailability; bioavailable; biochemical; biopolymeric; c al; c b; c c; c s; c total; calm; carbohydrate; carbon; cia; coastal; column; composition; concentrations; conditions; cont; continental; danovaro; deep; depth; differences; disturbance; ecol; effects; et al; fabiano; february; fig; filters; fraction; gulf; hydrolysable; impacts; intermediate; ip38; layer; lipid; mar; matter; mediterranean; natural; nco; october; organic; organic c; particles; particulate; period; pom; pools; progr; protein; pusceddu; quantity; residual; results; resuspension; s b; s s; samples; sampling; sea; sediment; september; ser; severe; shelf; station; storm; surface; t c; t s; tab; tests; thermaikos; total; trawling; variations; water; water column cache: aiol-5448.pdf plain text: aiol-5448.txt item: #70 of 143 id: aiol-5451 author: Marrone, Federico; Naselli-Flores, Luigi title: A review on the animal xenodiversity in Sicilian inland waters (Italy) date: 2015-11-16 words: 7632 flesch: 59 summary: A North America I S 19, 22 Mammalia Rodentia Myocastoridae Myocastor coypus Molina, 1872 A South America I E 17, 19, 21 Muridae Rattus norvegicus Berkenhout, 1769 P Asia U E 10, 13, 17, 19, 21 A, Allochthonous; P, parautochthonous; I, intentional; U, unintentional; E, established; S, sporadic; n.a., not available or not applicable; *its pa- rautochthony considered dubious by Gherardi et al. (2008, and references therein); §no sound information on the identity of the pikes introduced in Sicily is available (see text); 1, Consoli, 1928; 2, Faranda et al., 1977; 3, Tigano, 1983; 4, Tigano and Ferrito, 1986; 5, Lo Valvo et al., 1993; 6, Ferrito and Tigano, 1995; 7, Tigano and Ferrito, 1996; 8, Russo et al., 1997; 9, Veronesi et al., 1997; 10, Sarà, 1998; 11, Lenk et al., 1999; 12, Russo et al., 1999; 13, Scalera, 2001; 14, Lillo et al., 2005; 15, Duchi, 2006a; 16, Duchi, 2006b; 17, Ruffo and Stoch, 2006; 18, Nocita and Zerunian, 2007; 19, AA.VV., 2008; 20, Faraone et al., 2008; 21, Gherardi et al., 2008; 22, Termine et al., 2008; 23, Lillo et al., 2011; 24, Lillo et al., 2013; 25, Bianco, 2014; 26, Duchi, 2014a; 27, Duchi, 2014b; 28, Duchi, 2014c; 29, Duchi and Miceli, 2014; 30, Vamberger et al., 2015. No n- co mm er cia l u se on ly 9 F. Marrone and L. Naselli-Flores al., 2014a); however, some information on the potential negative role of the red swamp crayfish (P. clarkii) in Si- cilian ecosystems as a vector for toxins and heavy metals is available (Naselli-Flores et al., 2007; Bellante et al., 2015), as well as sound evidences on the threats exerted by the African clawed frogs on native amphibians (Faraone et al., 2008; Lillo et al., 2011) (Tab. 4). keywords: alien; allochthonous; america; and\or; animal; aquatic; asia; available; bianco; biological; biota; boggero; case; checklist; cia; cianfanelli; clarkii; data; date; della; different; difficult; distribution; dubious; duchi; ecol; ecosystems; effects; emys; established; et al; europe; european; evidences; evol; faraone; fauna; ferrito; fish; flores; freshwater; gambusia; gherardi; gherardi et; girard; holbrooki; human; ichthyol; impact; indigenous; indigenous species; information; inland; inland waters; intentional; introduction; invasions; invasive; invertebrate; italian; italy; laevis; liberto; likely; lillo; linnaeus; literature; locality; marrone; n.a; naselli; native; naturalista; nco; nis; nocita; non; north; number; occurrence; orbicularis; origin; palermo; paper; parautochthonous; populations; precise; presence; present; procambarus; recent; red; references; regions; relevant; reviews; ruffo; russo; scalera; sicilian; sicilian inland; sicily; single; sound; southern; species; specimens; sporadic; status; stoch; studies; study; tab; tabs; taxa; taxon; threats; tigano; tricarico; u e; valvo; waters; xenodiversity; xenopus; zerunian cache: aiol-5451.pdf plain text: aiol-5451.txt item: #71 of 143 id: aiol-5456 author: Salmaso, Nico; Boscaini, Adriano; Capelli, Camilla; Cerasino, Leonardo; Milan, Manuela; Putelli, Sara; Tolotti, Monica title: Historical colonization patterns of Dolichospermum lemmermannii (Cyanobacteria) in a deep lake south of the Alps date: 2015-11-23 words: 10217 flesch: 55 summary: The analysis of the records of sub-fossil akinetes pre- served in deep layers of lake sediments represents a pow- erful and efficient tool to reconstruct the long-term temporal development of potentially toxic Nostocales in water bodies at secular timescales. In this work, the establishment of the populations of D. lemmermannii in Lake Garda has been evaluated by the direct counting of sub-fossil akinetes extracted from sediment cores, and by es- timating the abundance of filaments germinated from sub-fossil viable akinetes. keywords: 1990s; 2000s; ability; abundance; air; akinetes; algae; alps; anabaena; analyses; annual; aphanizomenon; appearance; aquae; availability; beginning; biol; blooms; cells; change; cia; climate; colonisation; column; concentrations; conditions; core; corresponding; counting; cyanobacteria; data; decrease; deep; depth; development; diatoms; different; direct; distribution; dolichospermum; dolichospermum lemmermannii; ecology; effects; environmental; establishment; et al; european; eutrophication; fig; filaments; flos; formation; fossil; fossil akinetes; freshwater; garda; gas; germinated; germination; global; growth; half; hand; harmful; high; increase; iseo; isolated; italian; lake; lake garda; large; layers; lemmermannii; light; livingstone; loess; long; low; l–1; mean; methods; microbiol; middle; milan; mosello; nco; nitrogen; north; nostocales; number; nutrients; patterns; pelagic; period; phosphorus; photosynthetic; phylogenetic; phytoplankton; point; populations; presence; present; rapid; recent; regions; research; results; resurrection; reynolds; rpob; salmaso; salmaso et; samples; sci; sediments; sequences; single; south; species; springer; station; strains; study; sub; subalpine; successive; sukenik; summer; surface; temperatures; temporal; term; time; total; toxic; trend; university; values; vegetative; vertical; water; work; years cache: aiol-5456.pdf plain text: aiol-5456.txt item: #72 of 143 id: aiol-5466 author: Gallina, Alessandra A.; Chung, Chih-Ching; Casotti, Raffaella title: Expression of death-related genes and reactive oxygen species production in Skeletonema tropicum upon exposure to the polyunsaturated aldehyde octadienal date: 2015-11-16 words: 6136 flesch: 61 summary: In the marine diatom Skeletonema tropicum (formerly costatum) two genes have been identified, coding for two identical Ca-regulated proteins, named S. costatum Death- Specific Proteins (ScDSP-1 and ScDSP-2) (Chung et al., 2005), which are both composed of a transmembrane do- main and a pair of EF-hand motifs (Luan et al., 2002; Means and Dedman, 1980). Their expression is correlated to DNA fragmentation, suggesting for a possible role of the encoded protein in the signal transduction of stress to the cell death machinery (Chung et al., 2005, 2008). keywords: aldehydes; aldrich; apoptosis; berges; bidle; biol; bloom; casotti; cell; cell death; chung; chung et; cia; concentrations; control; costatum; cultures; data; death; dhr; diatom; different; et al; experiments; exposure; expression; factors; falkowski; fig; flow; fluorescence; gallina; gene; green; growth; h2o2; increase; induced; levels; light; like; limitation; marine; means; microbiol; min; mrna; nco; nitric; octa; octadienal; organisms; oxidative; oxide; oxygen; pcd; peak; phycol; phytoplankton; polyunsaturated; population; production; programmed; pua; reactive; related; response; results; rna; role; ros; samples; scdsp; scdsp-2; secondary; segovia; sigma; signal; skeletonema; species; specific; stages; stress; study; taiwan; thalassiosira; threshold; time; total; tropicum; unicellular; usa; values; vardi cache: aiol-5466.pdf plain text: aiol-5466.txt item: #73 of 143 id: aiol-5470 author: Franzo, Annalisa; Cibic, Tamara; Del Negro, Paola; De Vittor, Cinzia title: Spatial distribution of microphytobenthos, meiofauna and macrofauna in the north-western Adriatic Sea: a synoptic study date: 2015-12-18 words: 13207 flesch: 63 summary: Moreover, MPB play a key role Spatial distribution of microphytobenthos, meiofauna and macrofauna in the north-western Adriatic Sea: a synoptic study Annalisa Franzo,* Tamara Cibic, Paola Del Negro, Cinzia De Vittor Sezione Oceanografia, Istituto Nazionale di Oceanografia e Geofisica Sperimentale (OGS), via A. Piccard 54, I-34151 Trieste, Italy ABSTRACT In view of the general paucity of integrated information on offshore benthic communities in the Adriatic Sea and given the vulner- ability of this particular coastal system, microphytobenthos, meiofauna and macrofauna were synoptically investigated in front of the Emilia-Romagna coast (northern Adriatic Sea) in September 2010 and March 2011. Overall, all size classes of benthic communities can be suitable for investigating and characterising the habitat where they live. keywords: abiotic; abundance; abundant; adriatic; adriatic sea; ampelisca; analysis; anosim; area; assemblages; availability; average; b02; b03; b04; balsamo; benthic; benthic communities; c01; c02; c03; c04; carbon; cells; chemical; chl; cia; cibic; cluster; cm–3; coast; coastal; coastline; communities; community; composition; concentrations; conditions; considered; content; corbula; crossed; d02; d03; d04; danovaro; data; depth; diatoms; different; din; dissimilarity; distinct; diversity; domain; dominance; dominant; emilia; environmental; et al; fact; factors; fig; franzo; frontalini; gibba; grain; grid; groups; gyrosigma; g–1; higher; highest; ind; indet; influence; inorganic; inshore; investigated; italy; knowledge; light; likely; lowest; m depth; macrofauna; main; march; marine; matter; meioand; meiofauna; microphytobenthos; mpb; mud; m–2; nco; nematodes; nitrogen; nitzschia; nmi; northern; nutrient; offshore; offshore stations; ones; open; organic; organisms; paralia; percentage; periods; point; pore; presence; present; primary; production; references; relative; results; river; role; romagna; sampling; sand; sea; second; sediment; sedimentary; semprucci; september; shallower; shelf; significant; simonini; size; species; spinipes; spp; stations; stressors; study; sulcata; tab; taxa; toc; total; values; variables; varied; water; way cache: aiol-5470.pdf plain text: aiol-5470.txt item: #74 of 143 id: aiol-5479 author: Pusceddu, Antonio; Bianchelli, Silvia title: Everything you wanted to know about regime shifts in the marine environment and have not dared to ask, yet date: 2015-11-16 words: 1433 flesch: 68 summary: Overall, the special issue is cleverly organized according to a logical flow that highlights, first of all, the theoretical aspects and the emerging issues of the more recent re- search on marine regime shifts, identifies their main driv- ers, and provides a list of tools to adaptively manage ecosystems affected by regime shifts; furthermore, it also provides a critical revision of the ‘regime shift’ concept, as well as insights and ideas for future directions of in- vestigation. Prestigious worldwide-recognized marine ecologists, including the most known experts of marine regime shifts, signed critical reviews dedicated to indicators of resilience (Dakos et al., 2015), mechanisms underlying the forma- tion of alternative stable states (Gårdmark et al. 2015), the theoretical bases for the prediction of regime shifts led by climate (Beaugrand, 2015), the different types of regime shifts and their causes (Jouffray et al., 2015), the resilience of coral reefs to global warming (Bozec et al., 2015), the role of overgrazing by sea urchins (Ling et al., 2015) and trophic cascades (Pershing et al., 2015), the planetary value of regime shifts in the ocean (Beaugrand et al., 2015), the issues of scale of regime shifts drivers (Fisher et al., 2015) and their impacts on ecosystem serv- ices (Rocha et al., 2015). keywords: beaugrand; conversi; drivers; ecosystems; edwards; environment; et al; folke; global; impacts; issue; management; marine; möllmann; oceanography; phil; r. soc; regime; regime shifts; resilience; scheffer; shifts; soc; special; theory; trans; transactions; underwater cache: aiol-5479.pdf plain text: aiol-5479.txt item: #75 of 143 id: aiol-5591 author: Accoroni, Stefano; Totti, Cecilia title: The toxic benthic dinoflagellates of the genus Ostreopsis in temperate areas: a review date: 2016-04-27 words: 14414 flesch: 65 summary: However, O. cf. ovata cells in the Adriatic Sea (Mediterranean Sea) have a DV/AP ratio slightly higher than 2 (i.e., 2.3-2.4) (Monti et al., 2007; Guerrini et al., 2010; Accoroni et al., 2012b). Ostreopsis blooms are often accompanied by mortality of benthic marine organisms, such as sea urchins, limpets, mussels, crustaceans, holothurians, sponges and even macroalgae (Di Turi et al., 2003; Shears and Ross, 2009, 2010; Accoroni et al., 2011). keywords: abundances; accoroni et; action; adriatic; al ga; algae; aligizaki; allelopathic; analogues; anderson; areas; associated; atlantic; battocchi; bay; benthic; biol; blooms; bomber; bravo; bull; burkholder; casabianca; cell; chang; chem; ciguatera; ciminiello; clupeotoxism; coastal; coasts; compounds; conditions; contrary; coolia; cultures; cycle; cysts; data; decrease; dello; dell’aversano; depth; different; dinoflagellate ostreopsis; dinoflagellates; dinophyceae; distribution; dynamics; ecol; eds; effects; environ; environmental; epiphytic; et al; experimental; factors; fattorusso; faust; field; forino; genetic; genus; genus ostreopsis; germination; glibert; granéli; group; growth; guerrini; gulf; harmful; health; higher; human; hydrodynamics; iacovo; intensity; isolates; italian; italy; japan; key; lemée; lenticularis; light; like; low; lower; mabrouk et; macroalgae; mangialajo; mangialajo et; mar; marine; mascarenensis; mediterranean; mediterranean sea; molecular; monti; monti et; mussels; m–2; natural; nco; new; nikolaidis; northern; nutrient; o et; o. cf; o. ovata; ocean; onset; optimal; organisms; ostreopsis; ostreopsis blooms; ostreopsis cf; ostreopsis ovata; ostreopsis siamensis; ostreopsis species; ostreopsis spp; ovata; ovatoxin; pacific; palytoxin; penna; penna et; perini; period; pezzolesi; pezzolesi et; phase; photons; phycol; pichierri; pistocchi; pltx; pollut; possible; proc; production; proliferation; relation; rhodes; riobó; riviera; ro al; role; romagnoli; ross; salinity; samples; scalco; schmidt; sci; sea; seasonal; selina; shears; shellfish; si s; siamensis; sites; species; spp; strains; studies; study; substrata; summer; s–1; tartaglione; temperature; threshold; totti; totti c; totti et; toxic; toxicity; toxicon; toxins; tubaro; turki; tyrrhenian; values; vanucci; vila; vila et; waters; western; yasumoto; yasumoto et; zealand; µmol cache: aiol-5591.pdf plain text: aiol-5591.txt item: #76 of 143 id: aiol-5623 author: Hilgert, Stephan; Wagner, Adrian; Kiemle, Lisa; Fuchs, Stephan title: Investigation of echo sounding parameters for the characterisation of bottom sediments in a sub-tropical reservoir date: 2016-07-07 words: 7641 flesch: 62 summary: Independent from the selected echo sounder, the clas- sification of sediment parameters is still largely limited to physical parameters, such as grain size distribution. In addition to the standardised ‘first echo division method’ and ‘first/second bottom ratio method’ (Burczynski, 1999), further signal parameters ex- tracted by the sediment classification tool of the Sonar5- Pro software were tested with respect to their correlations with sediment parameters obtained by ground truthing and at changed pulse durations. keywords: acoustic; acoustic parameters; acoustic sediment; addition; anderson; area; attack; average; bathymetric; best; better; brazil; bulk; carbon; characterisation; cia; classification; comparison; configuration; content; core; core samples; correlation; data; decay; density; depth; detection; different; distribution; echo; entire; et al; features; fig; frequencies; frequency; grab; ground; higher; hydro; influence; khz; length; loi; lower; measurements; method; nco; organic; pacheco; parameters; particles; phase; phosphorus; properties; pulse; reservoir; results; samples; sampling; seabed; second; sediment; sediment characterisation; sediment parameters; signal; single; size; software; sounder; surface; survey; systems; tab; total; truthing; values; volume; vossoroca; water; wet cache: aiol-5623.pdf plain text: aiol-5623.txt item: #77 of 143 id: aiol-5684 author: Pusceddu, Antonio; Salmaso, Nico title: A new deal for Advances in Oceanography and Limnology (AIOL Journal) date: 2015-12-18 words: 854 flesch: 42 summary: Layout 1 Advances in Oceanography and Limnology, 2015; 6(1/2): 1 EDITORIAL DOI: 10.4081/aiol.2015.5684 With this first double issue of 2015, Advances In Oceanography and Limnology (AIOL Journal) is facing an important regime shift. A new deal for Advances in Oceanography and Limnology (AIOL Journal) Antonio Pusceddu,1 Nico Salmaso2 1Dipartimento di Scienze della Vita e dell’Ambiente, Università degli Studi di Cagliari, 09126 Cagliari, Italy; 2Dipartimento Agroecosistemi Sostenibili e Biorisorse, Fondazione E. Mach, San Michele all’Adige, Trento, Italy Corresponding author: apusceddu@unica.it ; nico.salmaso@fmach.it keywords: access; advances; aiol; editorial; editors; future; issue; journal; limnology; new; oceanography; open; papers; publication; quality; scientific; world cache: aiol-5684.pdf plain text: aiol-5684.txt item: #78 of 143 id: aiol-5791 author: Piccolroaz, Sebastiano title: Prediction of lake surface temperature using the air2water model: guidelines, challenges, and future perspectives date: 2016-04-27 words: 10334 flesch: 51 summary: In addition, model calibration can be performed using Simple Random Sampling or the Latin Hypercube Sampling technique (McKay et al., 1979) besides the PSO, which are computationally more expensive but ex- plore more uniformly the space of parameters, allowing for conducting sensitivity analyses of model parameters. In this work, the possible user of the air2water model is provided with all the fundamental information for a proper use of the model: from the initial definition of ap- propriate a priori range of variations of model parameters to an effective post-processing analysis of results, passing through a sensitivity analysis about the influence of miss- ing data on model performance. keywords: 4and; aim; air temperature; air2water; air2water model; analysis; annual; available; average; best; budget; calibration; case; challenges; cia; climate; complex; continuous; daily; data; deep; depth; different; dynamics; effect; equation; et al; fact; fig; final; flux; forcing; function; gaps; guidelines; heat; high; hnet; information; input; lake; lake erie; lake superior; lake surface; larger; limnol; limnology; livingstone; long; lst; main; maximum; mean; methods; missing; model; model calibration; model parameters; model performance; nco; number; numerical; observations; observed; oceanogr; optimization; order; parameter version; parameters; particular; performance; period; perspectives; physical; piccolroaz; plot; possible; previous; priori; processes; proper; range; reference; regression; relationships; response; results; rmse; scale; seasonal; section; series; set; shallow; significant; simple; sinusoidal; stratification; superior; surface; tab; temperature; term; thermal; time; toffolon; use; validation; values; version; volume; water temperature; work; year cache: aiol-5791.pdf plain text: aiol-5791.txt item: #79 of 143 id: aiol-5899 author: Milliman, John D.; Bonaldo, Davide; Carniel, Sandro title: Flux and fate of river-discharged sediments to the Adriatic Sea date: 2016-11-25 words: 5320 flesch: 60 summary: Geochemical data confirm that Albanian river sediment extends well into the southern and central Adriatic Sea. River sediment flux and fate in the Adriatic Sea 113 contrast, because of periodic hyperpycnal discharge and counter-clockwise circulation, Albanian river sediments are transported northward into the central parts of the Adriatic Sea. keywords: adriatic; adriatic sea; albanian; annual; area; average; basin; cambridge; carniel; clara; coastal; concentrations; construction; contrast; daily; dam; data; discharge; et al; events; farnsworth; fate; fig; flash; floods; flux; fluxes; geol; global; greater; high; higher; hyperpycnal; integrated; italian; j.d; km2; large; loads; mar; milliman; mississippi; mountainous; mulder; northern; ocean; open; peak; press; river sediment; rivers; santa; sea; sediment; sediment discharge; semi; shelf; small; southern; syvitski; tons; total; transport; trincardi; university; water; western; yr–1 cache: aiol-5899.pdf plain text: aiol-5899.txt item: #80 of 143 id: aiol-5948 author: Luna, Gian Marco; Quero, Grazia Marina; Perini, Laura title: Next generation sequencing reveals distinct fecal pollution signatures in aquatic sediments across gradients of anthropogenic influence date: 2016-11-25 words: 7607 flesch: 52 summary: We used NGS of 16S rRNA gene amplicons to identify and track fecal indicator bacteria within complex benthic microbial assemblages, by taking advantage of the method recently proposed by Newton et al. (2013), that allows to poten- tially discriminate between feces-associated and sewage- associated bacteria. Vandewalle et al. (2012) reported that only a small fraction of OTUs in sewage matched sequences from human fecal samples, and suggested that these sewage-associated taxa, that thrive within the sewer system, may serve as useful ad- juncts to fecal indicators for tracking sewage pollution in surface waters. keywords: 16s; abundance; acinetobacter; adriatic; alternative; alternative fecal; analyses; anthropogenic; aquatic; aquatic sediments; arcobacter; area; assemblages; average; bacteria; bacteroidaceae; cia; city; closer; clostridiaceae; coastal; coli; contamination; contribution; cumulative; different; discharge; dna; enterobacteriaceae; enterococcus; environ; environment; escherichia; et al; fecal; fecal bacteria; fecal contamination; fecal indicators; fecal pollution; feces; fecesand; fig; generation; genus; higher; highest; human; important; indicators; industrial; inner; italy; lachnospiraceae; lagoon; large; largest; luna; marine; mclellan; microbial; nco; newton; ngs; number; offshore; open; otus; pollutants; pollution; populations; porphyromonadaceae; potential; presence; prodelta; prp; quality; range; relative; results; river; rrna; ruminococcaceae; samples; sampling; sci; sea; sediments; sequences; sequencing; sewage; signature; significant; site; sources; stations; studies; study; taxa; traditional; trichococcus; venice; water cache: aiol-5948.pdf plain text: aiol-5948.txt item: #81 of 143 id: aiol-6168 author: Korponai, János; Gyulai, István; Braun, Mihály; Kövér, Csilla; Papp, István; Forró, László title: Reconstruction of flood events in an oxbow lake (Marótzugi-Holt-Tisza, NE Hungary) by using subfossil cladoceran remains and sediments date: 2016-11-25 words: 7322 flesch: 64 summary: Lotic sediment layers showed significantly lower LOI and SPDU values (LOI: K-W test, χ2=9.9031, df=1, P<0.01; SPDU: K-W test, χ2=6.7706, df=1, P<0.01). Remains of mud dwellers, i.e., Iliocryptus sp. and Monospilus dispar, were found exclu- sively in lotic sediment layers. keywords: abstract; abundance; alona; alonella; analysis; balaton; bosmina; braun; budapest; changes; chydorus; cladocera; cluster; coarse; common; communities; community; conditions; content; core; density; depth; development; df=231; different; discriminant; distribution; english; environmental; et al; events; fig; fine; flood; floodplain; forró; fractions; frey; grain; harpae; high; higher; holt; hungarian; hungary; hydrobiologia; hydrological; ind; korponai; lake; large; layers; lda; lentic; level; loi; longirostris; lotic; low; lower; marótzugi; müller; organic; oxbow; oxbow lakes; pigment; ratajac; reconstruction; rectangula; regime; remains; river; river tisza; sand; scores; sebestyén; section; sediment; sedimentation; shallow; size; spdu; species; sphaericus; stages; statistical; studies; study; subfossil; test; time; tiscia; tisza; total; values; water; zone; zooplankton; zsuga cache: aiol-6168.pdf plain text: aiol-6168.txt item: #82 of 143 id: aiol-6215 author: Bérubé Tellier, Alexandre; Drevnick, Paul E.; Bertolo, Andrea title: Brook trout (Salvelinus fontinalis) extinction in small boreal lakes revealed by ephippia pigmentation: a preliminary analysis date: 2016-12-29 words: 6572 flesch: 56 summary: (2009) based on the comparison of the Akaike Information Criterion (AIC) among different models: i) we first selected the appropriate random term by comparing a full model fitted with all the independent fixed variables considered as important given the sampling design (lake type, stratum and their interac- tion), to an equivalent model with a random intercept for each study lake, and to another model with both a random intercept and slope for each study lake. Restricted Esti- mates Maximum Likelihood (REML) was used to calcu- late AIC in this case; ii) we then selected the appropriate fixed terms by comparing the fit of the full model to a model without the interaction term and to a model without the stratum term (lake type only). keywords: 210pb; alphonse; analysis; approach; average; better; biol; brook; brook trout; canada; cladocerans; clear; cores; creation; daphnia; dark125; dark75; darker; data; dating; des; different; ephippia; ephippium; ephippium pigmentation; et al; extinction; fig; fish; fishless; genévrier; gerrish; giron; image; jeppesen; lakes; layers; length; levels; lmnpc; low; mellors; model; morphotype; national; noir; park; percentage; period; picture; pigmentation; pixels; planktivorous; plante; populations; predation; predators; preliminary; presence; present; pressure; protection; québec; related; results; sediment; selection; size; small; species; study; surface; tab; term; threshold; trait; trout; type; variables; variation; viable; visual; zaret; zooplankton cache: aiol-6215.pdf plain text: aiol-6215.txt item: #83 of 143 id: aiol-6217 author: Niska, Monika Magdalena title: The Eemian/Early Vistulian development of the Solniki paleolake (north-eastern Poland) as shown by subfossil Cladocera date: 2016-12-27 words: 10066 flesch: 60 summary: The first comprehensive analysis of subfossil Cladocera from Eemian lake sediments in Eu- rope was performed in Denmark (Frey, 1962). The presence of cold- water tolerant species, such as A. harpae, Ch. sphaericus, small Alona and B. longirostris, are present, and the di- versity index drops down to 0.54. keywords: abundance; affinis; alnus; alona; analysis; artemisia; assemblages; beginning; betula; bosminidae; brørup; caz; central; changes; chydoridae; cladocera; climate; climatic; cold; conditions; coregoni; crustacea; decrease; deposits; depth; development; dispar; diversity; dominant; e.g.; early; eemian; eemian interglacial; end; environmental; europe; evolution; favourable; fig; forests; frey; geol; glaciation; grabowska; gąsiorowski; g–1; harpae; herning; high; history; hofmann; holocene; iii; increase; ind; index; individuals; interglacial; interstadial; isotope; kubłowo; kupryjanowicz; lake; lamellatus; late; level; littoral; longirostris; low; max; middle; mirosław; mis; nana; nevalainen; niska; nly; northern; number; nutrient; paleolake; paz; pelagic; period; pinus; planktonic; podlasie; poland; polish; pollen; presence; present; profile; quadrangularis; quatern; quercus; reconstruction; rectirostris; remains; results; richness; roman; samples; sediments; small; solniki; species; sphaericus; stadial; stage; studied; study; subfossil; subzone; szeroczyńska; temperatures; time; tolerant; total; trophic; ulmus; uncinatus; vegetation; vistulian; water; zone cache: aiol-6217.pdf plain text: aiol-6217.txt item: #84 of 143 id: aiol-6218 author: Zawiska, Izabela; Zawisza, Edyta; Wojewódka, Marta; Sinev, Artem Y. title: Exploring the world of micro sculptures - subfossil Cladocera remains under the SEM date: 2016-12-29 words: 3520 flesch: 59 summary: Cladocerans are used as indicators of several abiotic and biotic environmental variables (Rumes et al., 2011; Chen et al., 2014), as they are very sensitive to changes in total phosphorus concentrations (Amsinck et al., 2005; Chen et al., 2010), water depth (Korhola et al., 2005; Nevalainen et al., 2011; Gałka et al., 2014), temperature (Lotter et al., 1997; Korhola, 1999; Mirosław-Grabowska and Zawisza, 2013; Nevalainen et al., 2013; Zawiska et al., 2015), pH (Locke and Sprules, 2000; Zawiska et al., 2013). Cladocera for SEM observations are usually collected from water by using a plankton net and dried using either a wide range of alcohol percentages (70%, 90%, 95%, 100%) (Duigan, 1992; Nandini et al., 2009), or the strong reagent hexam- ethyldisilazane (Laforsch and Tollrian, 2000; Sousa et al., 2015; Juračka et al., 2016). keywords: 11,000x; analysis; anomopoda; bosmina; branchiopoda; changes; chydorus; cladocera; comendador; crustacea; different; distilled; eds; electron; elmoor; environmental; et al; fig; guatemala; head; high; images; indicators; korhola; lake; level; light; living; loureiro; magnification; material; method; microscope; nevalainen; new; observation; observed; pictures; poland; polish; prepared; procedure; remains; saha; salvador; samples; sciences; sculpture; sediment; sem; shell; sinev; smol; species; specimens; spp; subfossil; subfossil cladocera; surface; time; van; water; world; zawiska cache: aiol-6218.pdf plain text: aiol-6218.txt item: #85 of 143 id: aiol-6234 author: Zawisza, Edyta; Filbrandt-Czaja, Anna; Correa-Metrio, Alexander title: Subfossil Cladocera and pollen as indicators of natural and anthropogenic trophic changes of Lake Jelonek (Tuchola Forest, N Poland) during the Holocene date: 2016-12-09 words: 8790 flesch: 61 summary: Pelagic species (Bosminidae) dominated and Tab. 1. 14C dates from Lake Jelonek sediments. The increase in the content of heather (Calluna vulgaris (L.) Hull) pollen along with the presence of common ju- Fig. 3. Age-depth model based on the 14C dating of Lake Jelonek sediments, showing sediment accumulation from Late Glacial to current times. keywords: 14c; abundance; activity; age; alona; ams; analysis; anthropogenic; area; beginning; behre; berglund; bls; borów; bosmina; cal; catchment; caz; century; changes; chydorus; cladocera; cladocera species; climate; colonization; conditions; content; coregoni; czaja; data; decline; depth; detritus; development; e.g.; early; ecosystems; eds; end; environmental; et al; fig; filbrandt; forest; glacial; gyttja; herbaceous; high; history; holocene; human; impact; important; increased; indicators; jelonek; lake; lake jelonek; lake trophic; late; level; littoral; longirostris; longispina; low; major; matter; mesotrophic; middle; millenial; modern; natural; nutrient; organic; paleolimnological; palynological; pelagic; period; phase; planktonic; plants; poland; polish; pollen; presence; present; radiocarbon; recovery; rectangula; related; relative; remains; results; samples; scale; second; sediment; settlement; significant; species; sphaericus; status; study; subfossil; surface; szeroczyńska; taxa; time; total; trees; trophic; tuchola; tucholskich; use; vegetation; water; years; zawisza; zone cache: aiol-6234.pdf plain text: aiol-6234.txt item: #86 of 143 id: aiol-6266 author: Wojewódka, Marta; Zawisza, Edyta; Cohuo, Sergio; Macario-González, Laura; Schwalb, Antje; Zawiska, Izabela; Pérez, Liseth title: Ecology of Cladocera species from Central America based on subfossil assemblages date: 2016-12-07 words: 7899 flesch: 61 summary: Ecology of Cladocera species from Central America based on subfossil assemblages Marta Wojewódka,1* Cluster analysis discriminated 6 groups of Cladocera species with a high correlation level within groups (≥0.8), which showed different types of correlation with lake characteristics and environmental variables. keywords: alona; alonella; altitude; america; analysis; anomopoda; area; asl; atitlán; bosmina; bosminidae; cca; central; changes; chanmico; chicabal; chiligatoro; chydoridae; chydorus; cladocera; cladocera species; climate; cluster; cm–1; comandador; composition; conductivity; correlation; daphnia; daphniidae; depth; dissolved; distribution; dominant; dumont; environmental; et al; fig; glabra; group; guatemala; gutiérrez; high; hydrobiologia; ipala; jucutuma; km2; lachuá; lakes; las; level; leydigia; littoral; longispina; los; louisi; low; madre; magdalena; maximum; mexico; mountain; muchacho; negritos; ossiani; oxygen; planktonic; pozas; pulchella; quadrangularis; quexil; region; remains; results; rosario; sacnab; salpetén; salvador; secchi; sediments; sinev; species; sphaericus; study; subfossil; subfossil cladocera; surface; szeroczyńska; tab; ticamaya; transparency; type; variables; verde; vieja; visibility; water; zawisza; zone cache: aiol-6266.pdf plain text: aiol-6266.txt item: #87 of 143 id: aiol-6280 author: Gkelis, Spyros; Vlamis, Aristidis title: Can cyanobacteria infect underground water sources? Evidence from a small scale monitoring of natural mineral water drinking source date: 2017-05-03 words: 3391 flesch: 58 summary: Water samples were collected Advances in Oceanography and Limnology, 2017; 8(1): 87-91 ARTICLE DOI: 10.4081/aiol.2017.6280 This work is licensed under a Creative Commons Attribution-NonCommercial 4.0 International License (CC BY-NC 4.0). Water samples were stored in polyethylene bottles and transferred to the laboratory (<5 h) under cool and dark conditions. keywords: 16s; abundance; algae; amplification; analysis; blooms; bottled; cells; cfia; cia; cyanobacteria; cyanotoxins; detection; dna; drinking; et al; gene; gkelis; greece; harmful; hisbergues; human; july; lake; l–1; management; mcya; mediterranean; microcystis; mineral; molecular; monitoring; natural; nco; occurrence; paerl; pcr; phytoplankton; presence; primer; product; production; report; results; risk; samples; small; source; studies; sup; tab; thessaloniki; toxic; underground; vasconcelos; water; zaoutsos cache: aiol-6280.pdf plain text: aiol-6280.txt item: #88 of 143 id: aiol-6293 author: Leppänen, Jaakko Johannes; Weckström, Jan title: Varying degradation of subfossil Daphnia longispina during the past 250 years and the discovery of fossil helmet-type head shields: preliminary results date: 2016-11-25 words: 6343 flesch: 58 summary: To investigate the changes in Daphnia preservation in lake sediments, we graded caudal spines from 20 fossil sediment samples into three taphonomic groups. Changes in Daphnia preservation in Lake Kivijärvi According to the statistically significant core zonation, the greatest shift in Daphnia preservation occurred at the depth of 9 cm (~1925) and was clearly reflected by changes in proportions of different grades. keywords: 20th; abundance; acidification; activities; addition; analysis; aquatic; area; beginning; carapace; catchment; caudal; century; changes; chaoborus; chitin; cladoceran; claws; community; concentrations; core; damage; daphnia; daphnia preservation; data; dating; degradation; depth; diatom; different; early; ecology; environmental; et al; eubosmina; example; excellent; fair; fig; finland; finnish; fish; fishing; forestry; form; frey; head; helmet; high; history; hydrobiologia; impact; indicator; information; institute; invertebrate; kauppi; kendall; kivijärvi; korjonen; lake; lake kivijärvi; large; length; leppänen; level; longispina; mandibles; mann; measurements; methods; microbial; model; müller; number; paleolimnol; past; pollution; poor; postabdominal; predation; preservation; preserved; proportion; remains; results; samples; sarmaja; sediment; shields; significant; size; small; smol; species; spines; spp; study; subfossil; taphonomic; type; use; values; water; weckström; work; zooplankton cache: aiol-6293.pdf plain text: aiol-6293.txt item: #89 of 143 id: aiol-6297 author: Szeroczyńska, Krystyna title: Long term subfossil Cladocera record from the partly varved sediment of Lake Tiefer See (NE Germany) date: 2016-12-27 words: 9056 flesch: 59 summary: On the significance of the planktonic/littoral ratio in the cladoceran stratigraphy of lake sediments. Annually laminated lake sediments and their palaeoclimatic relevance, p. 109-127. keywords: abundance; analysis; body; bosminidae; brauer; błędzki; cal; central; changes; cladocera; climate; composition; conditions; coregoni; data; deposition; depth; development; different; drӓger; early; environmental; et al; eubosmina; evolution; extreme; fauna; fig; fish; forms; frequency; germany; glacial; gliwicz; gościąż; group; high; higher; hofmann; holocene; human; impact; increase; individuals; jeppesen; kienel; korosi; lacustrine; lake; lake gościąż; lake sediments; lake tiefer; laminated; late; level; littoral; long; longirostris; longispina; mesotrophic; morphological; morphs; mucro; non; number; nutrient; observed; occurrence; paleolimnol; pelagic; period; phase; planktonic; poland; predation; predators; present; production; profile; record; related; remains; results; section; sediments; size; smol; species; status; studies; study; subfossil; subfossil cladocera; szeroczyńska; temperature; term; tiefer; time; total; trophic; varved; varved sediments; water; years; zooplankton cache: aiol-6297.pdf plain text: aiol-6297.txt item: #90 of 143 id: aiol-6319 author: Savela, Henna; Spoof, Lisa; Höysniemi, Niina; Vehniäinen, Markus; Mankiewicz-Boczek, Joanna; Jurczak, Tomasz; Kokociński, Mikolaj; Meriluoto, Jussi title: First report of cyanobacterial paralytic shellfish toxin biosynthesis genes and paralytic shellfish toxin production in Polish freshwater lakes date: 2017-05-03 words: 6936 flesch: 58 summary: The presence of PST biosynthesis genes sxtA, sxtG and sxtS was determined using conventional qualitative PCR. For this reason, molecular analysis of PST biosynthesis genes have been proposed as an easier alternative for screening environmental samples for po- tential PST production. keywords: active; algae; amplification; anabaena; analysis; aphanizomenon; appl; aquae; associated; august; ballot; biosynthesis; casero; cia; circinale; cluster; common; concentrations; copies; copy; correlation; cyanobacteria; cylindrospermopsis; detection; dna; dolichospermum; environ; environmental; et al; europe; european; finland; fld; flos; freshwater; genes; gracile; harmful; hplc; issatschenkoi; july; june; kokociński; lakes; l–1; mcyst§; method; microbiol; mihali; molecular; nco; neilan; niva; numbers; observed; october; paralytic; pcc; pcr; pereira; poland; polish; positive; possible; presence; present; prevalence; primers; probe; production; pst; pst biosynthesis; pst production; psts; qpcr; quantitative; raciborskii; samples; savela; savela et; saxitoxin; sequences; shellfish; species; spp; strains; studies; study; stx; sxt; sxt genes; sxta; sxtb; sxtg; sxts; tab; targeted; toxins; trace; turku; university; western cache: aiol-6319.pdf plain text: aiol-6319.txt item: #91 of 143 id: aiol-6320 author: Stoyneva-Gärtner, Maya P.; Descy, Jean-Pierre; Latli, Adrien; Uzunov, Blagoy A.; Pavlova, Vera T.; Bratanova, Zlatka; Babica, Pavel; Maršálek, Blahoslav; Meriluoto, Jussi; Spoof, Lisa title: Assessment of cyanoprokaryote blooms and of cyanotoxins in Bulgaria in a 15-years period (2000-2015) date: 2017-05-03 words: 16820 flesch: 69 summary: Data collection on planktonic cyanoprokaryotes This study compiles and evaluates the currently avail- able data on phytoplankton and relevant environmental data on Bulgarian WBs (mainly reservoirs and lakes) gathered during the period 2000-2015 (Stoyneva, 2003, 2010, 2014, 2015; Beshkova and Botev, 2004; Kalchev et al., 2004; Traykov, 2005; Pavlova et al., 2006, 2013a, 2014, 2015; Beshkova et al., 2008a, 2008b, 2012; Pavlova, 2007; Tsanev and Belkinova, 2008; Teneva et al., 2009, 2010a, 2010b, 2011, 2014; Cheshmedjiev et al., 2010a, 2013; Stoyanov et al., 2012, 2013, 2016; Stoyanov, 2014 Stoyneva et al., 2013, 2015; Belkinova et al., 2014; Dim- itrova et al., 2014a, 2014b; Dochin and Stoyneva, 2014, 2015; Dochin, 2015; Georgieva et al., 2015). Pavlova et al. 2013a Kayabsh 1 July2011 x x x Teneva et al. 2014 Sept2011 x x x Teneva et al. 2014 July2012 x x x Teneva et al. 2014 Sept2012 x x x Teneva et al. 2014 Kayabash 2 July2012 x x x Teneva et al. 2014 Sept2012 x x x Teneva et al. 2014 Ezero Momin brod 24.5.2013 x this study No n- co mm er cia l u se on ly Cyanoprokaryote blooms and cyanotoxins in Bulgaria (2000-2015) 141 Blato Srebarna and for the reservoirs Acheloy, Boyka, Borovitsa, Barzina, Daskal Atanasovo, Enitsa, Kamenets, Krushovitsa, Kardzhali, Mandra, Ovchi kladenets, Pche- lina, Seyachi, Suedinenie, Tri kladentsi, Vucha (Traykov, 2005; Cheshmedjiev et al., 2010a; Stoyanov et al., 2012; Belkinova et al., 2014; Stoyneva, 2014) (Fig. 1). keywords: 12.8.2013 x; 20.8.2004 x; 2013a; abstract; abundance; algae; altitude; anabaena; anagnostidis; analysis; aphanizomenon; area; asl; assessment; authors; average; b.a; belkinova; beshkova; biodiversity; biomass; biotechnol; blato; blooms; bodies; borovitsa; bulgarian; cell; cheshmedjiev; cia; cia l; coastal; coccal; codd; colonial; comparison; composition; conditions; conservation; country; cv.i; cyanobacteria; cyanoprokaryote; cyanotoxins; data; depth; different; dimitrova; distribution; diversity; dochin; dolichospermum; drinking; dyulgerova; e t; ecological; ecology; eds; environmental; et al; et s; european; ezero; fig; filamentous; framework; genera; genus; geographic; georgieva; georgieva et; group; gärtner; gärtner et; health; heterocytous; high; hplc; ibw; importance; inland; kladenets; komárek; krushovitsa; l u; lakes; level; location; low; lv.i; lv.iii; lv.vi; l–1; m.p; main; mandra; michev; microcystins; mladenov; monitoring; mountain; national; nco; nitrogen; non; number; paper; pavlova et; pchelina; period; phytoplankton; potential; presence; r lv.i; r s; rare; recorded; recreational; relation; reservoirs; results; reynolds; risk; s t; samples; shallow; sites; sofia; space; species; springer; srebarna; status; stoyanov; stoyneva; stoyneva et; studies; study; surface; tab; taxa; temperature; teneva et; time; total; toxic; trophic; types; uzunov; v et; variables; vaya; water; way; wbs; wetlands; whitton; x pavlova; x teneva; years cache: aiol-6320.pdf plain text: aiol-6320.txt item: #92 of 143 id: aiol-6323 author: Addico, Gloria Naa Dzama; Hardege, Jörg D.; Kohoutek, Jiri; deGraft-Johnson, Kweku Amoaku Atta; Babica, Pavel title: Cyanobacteria and microcystin contamination in untreated and treated drinking water in Ghana date: 2017-06-14 words: 11273 flesch: 63 summary: The study provides very rare but important information regarding the efficiency of drinking water treatment, concentrations and health risks of MCs in drinking water in the understudied geographi- cal region of Central and West Tropical Africa. A review of cyanobacteria and cyanotoxins removal/in- activation in drinking water treatment. keywords: abundant; accra; addico; addico et; addition; aeruginosa; africa; agardhii; algal; anabaena; analysis; aphanocapsa; april; area; average; barekese; blooms; cancer; cell; central; cia; cia l; concentrations; contaminated; contamination; countries; counts; cronbergae; cyanobacterial; cyanotoxins; cylindrospermopsis; czech; data; drinking; drinking water; environ; et al; february; ferruginea; fig; final; final intake; final water; flocculation; g.n.d; geitlerinema; genera; ghana; health; human; intake; intracellular; january; komárek; kpong; kumasi; l o; l u; lake; limit; liver; l–1; management; march; maximal; mcs; merismopedia; metropolitan; microcystins; ml–1; nco; nygaardii; occurrence; owabi; people; planktolyngbya; planktothrix; plant; population; present; primary; process; production; raciborskii; raw; raw water; recta; region; removal; research; reservoir; samples; sampling; sci; species; stage; step; study; supplementary; surface; svircev; tab; time; total; toxic; toxicol; toxins; treatment; water; water intake; water samples; water treatment; weija; west cache: aiol-6323.pdf plain text: aiol-6323.txt item: #93 of 143 id: aiol-6342 author: Sovadinova, Iva; Babica, Pavel; Adamovský, Ondřej; Alpatová, Alla; Tarabara, Volodymyr; Upham, Brad Luther; Bláha, Luděk title: Chlorination and ozonation differentially reduced the microcystin content and tumour promoting activity of a complex cyanobacterial extract date: 2017-05-03 words: 11087 flesch: 58 summary: Modulation of these cellular events by chemicals in vitro are consid- ered to be relevant biomarkers of tumour promoting po- tency in vivo, as was demonstrated e.g. for tumour promoting phorbol esters like TPA (Madhukar et al., 1996), organochlorine pesticides (Trosko et al., 1987), PCBs (Kang et al., 1996), low molecular weight PAHs (Bláha et al., 2002), clofibrate, phenobarbital, perfluo- rooctanoic acid, or organic peroxides (Upham et al., 2007; Upham et al., 2009; Vinken et al., 2009). Preventive measures as well as various water treatment technologies used to minimize human health risks caused by cyanobacteria and their toxins have been recently sum- marized and critically discussed (Westrick et al., 2010; Merel et al., 2013; Roegner et al., 2014; Hiskia et al., 2016; Ibelings et al., 2016). keywords: activation; activity; adverse; analyses; aromatic; assay; assessment; babica; bioassay; biological; biomass; blooms; bláha; c l; cancer; carbon; cells; chemical; chlorination; chlorine; cia; communication; complex; compounds; concentrations; control; corresponding; critical; cyanobacterial; cyanobacterial extract; cyanotoxins; cylindrospermopsin; cytotoxicity; decrease; degradation; dependent; determined; development; different; doses; drinking; dw l–1; dye; effective; effects; efficacy; efficiency; elimination; environ; environmental; epithelial; erk1/2; et al; experiments; exposure; extract; f344; fig; formation; g dw; gap; genotoxic; gjic; health; higher; human; ic50; increase; inhibition; intercellular; junctional; kinases; levels; line; liver; loec; lower; l–1; mapk; masten; mcs; merel; metabolites; microcystin; min; nco; negative; nicholson; non; novakova; observed; organic; original; oxidation; ozonation; ozone; p38; pathways; pesticides; polycyclic; potency; present; products; promoting; promotional; protein; rapid; reduction; removal; res; research; review; role; sample; sci; signalling; significant; sovadinová; specific; stress; studies; study; tab; technologies; tested; time; tissue; toc; toxicity; toxicol; toxins; treatment; trosko; tumour; upham; usa; values; vehicle; viability; vitro; wang; water; weight cache: aiol-6342.pdf plain text: aiol-6342.txt item: #94 of 143 id: aiol-6349 author: Akter, Sultana; Vehniäinen, Markus; Meriluoto, Jussi; Spoof, Lisa; Lamminmäki, Urpo title: Non-competitive ELISA with broad specificity for microcystins and nodularins date: 2017-05-03 words: 7055 flesch: 53 summary: Non-competitive assays rely on direct measurement of antibody binding sites occupied by analyte producing an easy-to-interpret signal which is proportional to analyte concentration. Non-competitive ELISA with broad specificity for microcystins and nodularins Sultana Akter,1* keywords: adda; akter; analogues; analyte; antibody; assay; binder; broad; codd; colour; commercial; competitive; competitive elisa; concentration; cyanobacterial; cyanotoxin; described; detectable; detection; development; different; dmlr; dmrr; drinking; easy; elisa; environmental; et al; fig; finland; generic; guideline; high; hplc; immunoassay; immunocomplex; incubation; initial; intracellular; lake; limit; liquid; l–1; measured; measurement; meriluoto; methods; microcystin; min; ml–1; nco; nodularin; non; peptide; performance; pnpp; ppia; protein; reagent; reference; results; rinehart; river; samples; scfv; signal; simple; sivonen; solution; specificity; spiked; spoof; standard; step; substrate; surface; temperature; time; toxicity; toxin; trf; turku; university; usa; value; variants; water; water samples; wells; wild; µg l–1 cache: aiol-6349.pdf plain text: aiol-6349.txt item: #95 of 143 id: aiol-6350 author: Gkelis, Spyros; Panou, Manthos; Chronis, Ioannis; Zervou, Sevasti-Kiriaki; Christophoridis, Christophoros; Manolidi, Korina; Ntislidou, Chrysoula; Triantis, Theodoros M.; Kaloudis, Triantafyllos; Hiskia, Anastasia; Kagalou, Ifigenia; Lazaridou, Maria title: Monitoring a newly re-born patient: water quality and cyanotoxin occurrence in a reconstructed shallow Mediterranean lake date: 2017-05-03 words: 10607 flesch: 57 summary: Recent research suggests that eutrophication and cli- mate change are two processes that increase rates of pri- mary production, shifting algal community towards bloom-forming and cyanobacterial species (O’Neil et al., 2012; Papadimitriou et al., 2013; Gkelis et al., 2014). It has, however, experienced adverse ef- fects already from the first year of its refilling, as toxin- producing cyanobacterial blooms (Oikonomou et al., 2012; Gkelis and Zaoutsos, 2014) and fish mortalities or considerable amounts of MCs in fish species have been detected (Papadimitriou et al., 2013). keywords: 2016; agricultural; analysis; aphanizomenoides; aphanizomenon; area; atx; ballot; basin; benthic; biomass; blooms; central; chamoglou; chemical; cold; concentrations; conditions; control; cyanobacteria; cyanotoxins; cylindrospermopsin; cyn; detection; different; din; dna; dokulil; dominance; dominant; ecological; ecosystem; eds; effects; elenkinii; elisa; environ; environmental; et al; european; eutrophic; eutrophication; fig; fish; freshwater; functional; gene; german; gkelis; gkelis et; greece; greek; group; guidance; harmful; health; high; higher; hydrobiologia; intracellular; july; kagalou; kalamaki; kalamaki reservoir; karla; kl1; kl2; kl3; komárek; lake; lake karla; level; light; long; loq; loq n.d; l–1; macroinvertebrates; main; management; maximum; mcs; mcya; mcye; mediterranean; method; microcystis; molecular; monitoring; multiple; n.d; network; new; nitrogen; nostocales; november; nutrient; occurrence; paerl; papadimitriou; parameters; pcr; period; phosphorus; phytoplankton; point; positive; presence; present; primer; production; quality; raciborskii; region; reservoir; results; reynolds; samples; sampling; saxitoxin; september; shallow; species; srp; stations; status; studies; study; stx; tab; taxa; temperature; time; total; toxic; toxicol; values; warm; water; water quality; wiedner; year; zaoutsos cache: aiol-6350.pdf plain text: aiol-6350.txt item: #96 of 143 id: aiol-6352 author: Stefanelli, Mara; Scardala, Simona; Cabras, Piera Angela; Orrù, Andrea; Vichi, Susanna; Testai, Emanuela; Funari, Enzo; Manganelli, Maura title: Cyanobacterial dynamics and toxins concentrations in Lake Alto Flumendosa, Sardinia, Italy date: 2017-05-03 words: 11625 flesch: 62 summary: Water samples were collected in three sites: (1) Zattere (maximum depth 50 m) at about 10 m from a trout’s float- ing cages farming plant; (2) Middle site in the centre of the lake (maximum depth 25 m), in front of the water off- take site (collecting water also for drinking purposes); and (3) Rio Osiana (maximum depth 7 m) close to the inflow of a small temporary tributary stream (Fig. 1). The extraction procedure was different for water samples and complex matrix as tissues. keywords: abundance; algae; alto; analysis; animal; apr; associated; average; blooms; blue; botrys; briand; buratti; cell; cell quota; cell–1; cia; community; complex; concentration; conditions; congeners; consistent; correlation; ctx; cyanobacteria; cyanotoxins; data; december; della; dem; densities; density; depth; detection; different; discrete; dolichospermum; dominant; drinking; dynamics; elisa; environmental; et al; exposure; extraction; field; fig; filters; fish; flumendosa; food; fraction; funari; genes; health; high; higher; human; integrated; isolated; italian; italy; jan; komárek; kurmayer; lake; linear; low; lower; lugliè; l–1; manganelli; mar; maximum; mc variants; mcs; mcyb+; messineo; method; microbiol; microcystis; monitoring; months; naegeliana; nco; nd nd; number; oct; order; p<0.001; pcr; period; phytoplankton; planctonicum; planktothrix; population; possible; potential; presence; present; production; quota; range; recovery; regression; reservoir; results; risk; rubescens; salmaso; samples; sampling; sardinia; sechi; significant; sites; species; specific; stefanelli; strains; study; sulis; summer; surface; system; tab; temperature; testai; tested; time; total; toxic; toxicity; toxicol; traces; trout; values; variability; variants; variation; vichi; water; water samples cache: aiol-6352.pdf plain text: aiol-6352.txt item: #97 of 143 id: aiol-6360 author: Svirčev, Zorica; Tokodi, Nada; Drobac, Damjana title: Review of 130 years of research on cyanobacteria in aquatic ecosystems in Serbia presented in a Serbian Cyanobacterial Database date: 2017-05-03 words: 5575 flesch: 58 summary: This database encompasses information on 65 aquatic ecosystems, including rivers, lakes, ponds, canals, irrigation reservoirs, reservoirs used for drinking water supply and reservoirs used for other purposes. Also, recent important and major cases of cyanobacterial blooming in reservoirs used for drinking water supply at Vrutci and Ćelije, the Aleksandrovac irrigation reservoir, the Ponjavica River and Lake Palić, including systematic research on the Lake Ludoš and few fishponds are further described. keywords: aeruginosa; agardhii; aleksandrovac; algae; anabaena; aph; aquae; aquatic; available; blaženčić; blooming; blooms; changes; cia; cyanobacteria; cyanotoxins; cylindrospermopsis; data; database; different; drinking; drobac; ecosystems; effects; environ; equivalents; et al; fish; fishponds; flos; fužinato; health; information; investigated; irrigation; karadžić; komárek; lake; ludoš; l–1; mass; mcs; microcystis; milovanović; mortality; nco; observed; obušković; occurrence; period; phytoplankton; planktothrix; presence; proceedings; production; raciborskii; republic; research; reservoirs; river; rubescens; sad; sci; sedmak; serbia; simeunović; simić; species; studies; subakov; supply; svirčev; tisa; tissues; tokodi; toxic; voda; water; world; years cache: aiol-6360.pdf plain text: aiol-6360.txt item: #98 of 143 id: aiol-6381 author: Cerasino, Leonardo; Capelli, Camilla; Salmaso, Nico title: A comparative study of the metabolic profiles of common nuisance cyanobacteria in southern perialpine lakes date: 2017-05-31 words: 6941 flesch: 60 summary: We used online re- sources (e.g., Norine: http://bioinfo.lifl.fr/NRP/) (Flissi et al., 2016), and literature (Czarnecki et al., 2006; Welker et al., 2006; Rounge et al., 2007; Ersmark et al., 2008; Rohrlack et al., 2008; Briand et al., 2016; Spoof et al., 2016) for finding possible matches. In particular, based on the analysis of isolated strains (Bernard et al., 2016), Aph. flos-aquae and T. bourrellyi were reported as ATX producers (Sivonen et al., 1989; Osswald et al., 2009; Salmaso et al., 2015; 2016; Shams et al., 2015), whereas M. aeruginosa and P. rubescens were mainly re- ported as MC producers (Metcalf and Codd, 2012), and D. lemmermannii as MCs and anatoxin-a(S) producer (Sivonen et al., 1992; Onodera et al., 1997). keywords: aeruginosa; alkaloids; anabaenopeptins; analysis; analytical; aph; aphanizomenon; aquae; attribution; atx; bioactive; bourrellyi; c3/4; case; cerasino; changes; cia; codd; common; compounds; congeners; considered; cultures; cyanobacteria; cyanopeptolin; data; different; distribution; diversity; dolichospermum; environ; et al; extraction; fig; flos; fragmentation; garda; groups; immonium; ion; italy; lakes; lemmermannii; lrdm; mass; mcs; metabolic; metabolites; method; microbiol; microc2; microcystis; min; mode; molecular; nco; peaks; peptides; peptidic; perialpine; planktothrix; potential; presence; production; profiles; prube17; prube23; psp; range; results; ribosomal; rrdm; rubescens; salmaso; secondary; shams; single; sivonen; species; spray; strains; tbour05; time; total; toxic; toxins; transitions; tychonema; typical; untargeted; values; water; welker cache: aiol-6381.pdf plain text: aiol-6381.txt item: #99 of 143 id: aiol-6394 author: Köker, Latife; Akçaalan, Reyhan; Albay, Meriç; Neilan, Brett A. title: Molecular detection of hepatotoxic cyanobacteria in inland water bodies of the Marmara Region, Turkey date: 2017-05-18 words: 5956 flesch: 59 summary: The occurence of cyanotoxins have been reported in several cyanobacterial genera such as Mi- crocystis, Nodularia, Aphanizomenon, Planktothrix, An- abaena and Cylindrospermopsis (Sivonen et al., 1990; Merel et. al., 2013; Bernard et al., 2017). keywords: 16s; aeruginosa; agardhii; akçaalan; albay; algae; amplification; anabaenopsis; anagnostidis; analysis; aphanizomenoides; aquae; aykulu; bloom; cia; codd; colonies; cyanobacteria; cyanotoxin; cylindrospermopsis; d.w; detection; different; distribution; dna; drinking; elenkinii; environmental; et al; flos; freshwater; genes; harmful; health; hep; hepatotoxin; hplc; identification; ifcc; isolated; istanbul; i̇znik; jungblut; km2; komárek; kurmayer; köker; küçükçekmece; lagoon; lake; manyas; marmara; maršálek; mcya; mcye; methods; mg–1; microbiol; microcystin; min; molecular; nco; neilan; new; nodularia; occurrence; pcr; phytoplankton; planktothrix; production; products; raciborskii; recreation; region; results; rrna; rubescens; samples; sapanca; shallow; species; sphaerospermopsis; spp; spumigena; strains; study; tab; taşkısı; tillett; total; toxic; toxicity; toxins; turkey; turkish; university; water; waterbodies; wesenbergii cache: aiol-6394.pdf plain text: aiol-6394.txt item: #100 of 143 id: aiol-6399 author: Milan, Manuela; Bindler, Richard; Tolotti, Monica title: Combining sediment Cladocera remains and geochemistry to reveal the role of a large catchment in driving changes in a small subalpine lake (Lake Ledro, N-Italy) date: 2016-12-27 words: 10129 flesch: 57 summary: Palaeoenvironmental changes inferred from biological re- mains in short lake sediment cores from the Central Alps and Dolomites. Usually, the presence of Bosminidae, and in particular of B. longirostris, indicate high levels of lake nutrient concentrations (Hofmann, 1998; Korosi et al., 2013), which contrasts with the infor- mation provided by the TP reconstruction based on sub- fossil pigments and diatoms. keywords: 1980s; 2000s; abundance; air; alpine; analysis; area; assemblages; average; b.(e; beginning; biological; body; bosmina; bosminidae; car; carotenoids; catchment; changes; cladocera; climate; composition; concentrations; conditions; content; core; correlation; data; decrease; density; depth; diatoms; different; effects; elements; enrichment; environmental; et al; events; fig; fish; fitting; flood; garda; geochemical; geochemistry; half; high; higher; holocene; hydrological; impacts; increase; individuals; information; invertebrate; italy; korosi; lake; lake ledro; large; late; ledro; legendre; level; littoral; longirostris; longispina; low; major; maximum; milan; milan et; mucro; nmds; nutrient; order; organic; p<0.05; paleolimnol; particular; past; peak; period; phosphorus; pigments; planktonic; predators; presence; profile; proxies; proxy; ratios; reconstruction; relation; remains; response; sample; sci; second; section; sediment; sediment cladocera; shannon; significant; simonneau; size; small; smol; species; spp; studies; study; subalpine; subfossil; surface; szeroczyńska; taxa; tcar; temperature; term; total; trophic; university; upper; values; vannière; variability; variables; vector; water; wet; xrf; zone cache: aiol-6399.pdf plain text: aiol-6399.txt item: #101 of 143 id: aiol-6429 author: Meriluoto, Jussi; Blaha, Ludek; Bojadzija, Gorenka; Bormans, Myriam; Brient, Luc; Codd, Geoffrey A.; Drobac, Damjana; Faassen, Elisabeth J.; Fastner, Jutta; Hiskia, Anastasia; Ibelings, Bastiaan W.; Kaloudis, Triantafyllos; Kokocinski, Mikolaj; Kurmayer, Rainer; Pantelić, Dijana; Quesada, Antonio; Salmaso, Nico; Tokodi, Nada; Triantis, Theodoros M.; Visser, Petra M.; Svirčev, Zorica title: Toxic cyanobacteria and cyanotoxins in European waters – recent progress achieved through the CYANOCOST Action and challenges for further research date: 2017-05-03 words: 15995 flesch: 50 summary: Furey et al., 2003; Gugger et al., 2005; Messineo et al., 2009; Osswald et al., 2009; Ballot et al., 2010; Faassen et al., 2012b; Kobos et al., 2013). Differences in analytical approaches were assumed to be one of the main causes of these diverging results, and in 2012, two independent studies recommended suitable ana- lytical methods for BMAA determination (Cohen 2012; Faassen et al., 2012a). keywords: acid; action; addition; advanced; algae; alien; anabaena; analysis; analytical; anatoxin; animal; antoniou; antx; aphanizomenon; appl; application; approaches; aquatic; assessment; associated; australia; authorities; available; ballot; benthic; biology; biosynthesis; blooms; bmaa; bormans; carbon; case; cells; cia; codd; compounds; concentrations; control; conventional; countries; cruz; current; cyanobacteria; cyanobacterial blooms; cyanobacterial monitoring; cyanocost; cyanotoxins; cylindrospermopsin; cyn; database; degradation; detection; development; different; dionysiou; dissemination; distribution; dolichospermum; drinking; drobac; e.g.; ecol; ecology; ecosystems; eds; effective; effects; end; environ; environmental; epidemiological; et al; europe; european; evolution; example; exposure; faassen; faassen et; fastner; field; fish; france; freshwater; future; g.a; gaps; gene; general; global; greece; groups; guidelines; handbook; harmful; hazards; health; high; hiskia; human; ibelings; identification; impacts; important; improvements; indicative; individual; information; institute; international; isolated; issues; jiang; kaloudis; key; knowledge; known; kokociński; komárek; kurmayer; laboratories; lakes; levels; loading; loci; major; management; managers; marzec; mass; mazur; mcs; measures; merel; meriluoto; meriluoto et; metcalf; methods; microbiol; microcystin; mitigation; molecular; monitoring; national; nco; needs; neilan; netherlands; network; neurotoxin; new; nod; non; nutrient; occurrence; order; ovalisporum; oxidation; ozone; particular; pathways; permanganate; phycol; phylogenetic; planktothrix; poisonings; poniedziałek; possible; potential; presence; present; prevention; problem; processes; producers; production; progress; promising; protocols; public; quality; raciborskii; range; rantala; recent; recreational; regions; regulatory; removal; report; research; reservoir; resources; results; review; risk; role; rzymski; réveillon; samples; scale; science; scientific; scientists; selection; serbia; special; species; spoof; stakeholders; strains; studies; stx; successful; surveys; svirčev; target; techniques; time; tools; toxic; toxic cyanobacteria; toxicity; toxicon; toxigenic; treatment; triantis; understanding; university; use; users; užice; visser; water; wide; wiley cache: aiol-6429.pdf plain text: aiol-6429.txt item: #102 of 143 id: aiol-6467 author: Tolotti, Monica; Milan, Manuela; Szeroczyńska, Krystyna title: Subfossil Cladocera as a powerful tool for paleoecological reconstruction date: 2016-12-29 words: 3740 flesch: 56 summary: Layout 1 INTRODUCTION Subfossil Cladocera (Crustacea, Branchiopoda) rep- resent one of the most valuable biological proxies pre- served in lake sediments that can be studied for reconstruction purposes (Kohrola and Rautio, 2011). The chitinous parts of their body are well preserved in lake sediments, and the taphonomic taxonomy is well established, thanks to the numerous studies that followed the first pioneer works by Frey (1960). keywords: adv; alps; altitude; america; amsinck; assemblages; birks; body; central; changes; cladocera; climate; composition; daphnia; davidson; drivers; ecological; ecology; ecosystems; effects; environmental; et al; fish; food; freshwater; glacial; high; holocene; hydrobiologia; indicators; jeppesen; korosi; lake; long; lotter; luoto; manca; milan; nevalainen; new; oceanol; paleoecological; paleolimnol; past; perga; pigmentation; poland; potential; predation; rautio; reconstruction; records; relation; remains; sediments; shallow; size; smol; species; studies; study; subfossil; subfossil cladocera; szeroczyńska; taphonomic; taxonomy; term; thematic; trophic; water; web; workshop; zawisza cache: aiol-6467.pdf plain text: aiol-6467.txt item: #103 of 143 id: aiol-6674 author: Kaloudis, Triantafyllos; Meriluoto, Jussi; Blaha, Ludek title: Foreword to the Themed Issue “Cyanobacteria” date: 2017-06-14 words: 1661 flesch: 29 summary: Monitoring a newly re-born patient: Water quality and cyanotoxin occurrence in a reconstructed shallow Mediterranean lake by Gkelis, Panou, Chronis, Zervou, Christophoridis, Manolidi, Triantis, Kaloudis, Hiskia, Ka- galou and Lazaridou discusses cyanobacterial abundance and diversity, toxin levels, physico-chemical and ecolog- ical characteristics in the recently reconstructed Lake Karla in Greece, showing immediately occurring prob- lems with cyanobacterial water blooms, toxin production and degradation of ecological status. Review/synoptic paper of CYANOCOST research and activities Toxic cyanobacteria and cyanotoxins in European wa- ters – recent progress achieved through the CYANOCOST Action and challenges for further research presented by 21 authors is a review summarising the outcomes of re- cent European research concerning toxic cyanobacteria and cyanotoxins, with an emphasis on developments within the framework of CYANOCOST. keywords: action; babica; blooms; bodies; cia; community; cyanobacteria; cyanocost; cyanotoxins; detection; drinking; ecological; european; health; issue; lake; management; mcs; meriluoto; microcystis; monitoring; nco; nod; non; occurrence; papers; production; research; results; review; science; species; strains; study; themed; toxic; water; work cache: aiol-6674.pdf plain text: aiol-6674.txt item: #104 of 143 id: aiol-6973 author: D'Alelio, Domenico; Luongo, Gabriella; Di Capua, Iole title: Plankton food for benthic fish: de visu evidence of trophic interaction between rainbow wrasse (Coris julis) and pelagic tunicates (Pegea confoederata) date: 2017-12-14 words: 3641 flesch: 63 summary: We present and describe pho- tographic frames documenting the above-mentioned trophic relation, we discuss plankton-benthos coupling in light of the existence of trophic routes connecting pelagic tunicates and benthic fish and we eventually analyse con- ceptually some possible perturbations to this route in- duced by global change. Plankton food for benthic fish: de visu evidence of trophic interaction between rainbow wrasse (Coris julis) and pelagic tunicates (Pegea confoederata) Domenico D’Alelio,1* keywords: animals; banco; benthic; benthos; body; boero; bsc; change; cia; citizen; coastal; colony; confaederata; coris; croce; different; d’alelio; ecol; et al; evidence; feeding; fig; fish; fishes; fluxes; food; gelatinous; global; interaction; julis; labrid; living; long; lter; mar; marine; matter; mazzocchi; mediterranean; milazzo; naples; organisms; pegea; pelagic; plankton; potential; rainbow; research; rocky; salp; samples; santa; sci; scuba; sea; second; species; stages; stomach; trophic; tunicates; underwater; warming; water; webs; wrasse cache: aiol-6973.pdf plain text: aiol-6973.txt item: #105 of 143 id: aiol-7194 author: D'Alelio, Domenico title: Biological complexity behind plankton system functioning: Synthesis and perspectives from a marine Long Term Ecological Research date: 2017-12-15 words: 8158 flesch: 52 summary: In the above-mentioned species, the highest genetic differentiation occurs in the course of apparently infrequent ‘clonal expansions’ establishing when blooms are flanked by a temporary but strong restriction of sex , which determines a positive unbalance of the mutation- to-recombination ratio (Ruggiero et al., in press) (Fig. 3). The clonal expan- sion detected in P. multistriata was apparently generated by the presence, in the blooming population, of a single mating type, which was therefore unable to undergo sex: the dominance of a ‘super-genotype’ was plausibly deter- mined by life-cycle characteristics as well as by environ- mental selection (Ruggiero et al., in press). keywords: adaptation; adaptive; amato; approaches; biodiversity; biol; biomass; blooming; blooms; boyce; changes; cia; clonal; coastal; communities; community; complexity; conceptual; conditions; context; cycle; data; diatom; different; divergence; diversity; dominance; dynamics; d’alcalà; d’alelio; d’alelio et; ecological; ecology; ecosystems; effects; environmental; et al; evolutionary; expansion; experimental; factors; fig; flattest; food; functional; functioning; genetic; genotypes; global; gon; gulf; high; higher; history; important; instance; interactions; italy; koonin; lakes; level; life; links; long; lower; lter; main; marine; mazzocchi; mediterranean; models; montresor; multistriata; mutation; naples; nature; nco; networks; nitzschia; occurring; ocean; oceanogr; organisms; patterns; pelagic; phytoplankton; plankton; planktothrix; population; present; press; processes; production; protists; pseudo; rare; rates; recombination; research; ribera; role; ruggiero; ruggiero et; sarno; sci; science; seasonal; selection; sex; sexual; size; species; specific; structure; studies; survival; system; term; time; trophic; variability; vegetative; web; webs; zingone; zooplankton cache: aiol-7194.pdf plain text: aiol-7194.txt item: #106 of 143 id: aiol-7207 author: Venail, Patrick title: Biodiversity ecosystem functioning research in freshwater phytoplankton: A comprehensive review of trait-based studies date: 2017-12-14 words: 6039 flesch: 49 summary: Half of them showed no influence of trait-based diversity on ecosystem functioning, meaning that variations in func- tioning are independent from variations in trait diversity among freshwater phytoplankton. Negative relationships were present in 11.5% of cases, which means a decreasing ecosystem functioning as trait diversity increased. keywords: average; bef; binomial; biodiversity; biomass; cardinale; categorical; cell; cia; continous; different; diversity; diversity metrics; duffy; ecol; ecological; ecosystem; ecosystem functioning; effects; et al; evenness; field; fontana; fontana et; freshwater; freshwater phytoplankton; functional; functioning; groups; growth; individual; influence; information; laboratory; lake; lentic; level; mechanistic; metrics; morphological; multiple; nco; negative; nitrogen; optimal; phosphorous; phytoplankton; positive; presence; production; pälffy; pälffy et; relationships; reported; research; resource; review; richness; santos; santos et; shurin; shurin et; single; size; species; stability; steudel; studies; study; systems; tab; total; trait; trait diversity; variable; variation; vogt cache: aiol-7207.pdf plain text: aiol-7207.txt item: #107 of 143 id: aiol-7209 author: Manca, Marina M. title: In memoriam of Peppe Morabito date: 2017-12-14 words: 3865 flesch: 60 summary: No n- co mm er cia l u se on ly In memory of Peppe Morabito 247 Thackeray SJ, Nõges P, Dunbar MJ, Birger Skjelbred BJD, Morabito G, Carvalho L, Phillips G, Mischke U, Catalan J, de Hoyos C, Laplace C, Austoni M, Padedda BM, Maileht K, Pasztaleniec A, Järvinen M, Lyche Solheim A, Clarke RT, 2013. Societal commitment, profound expertise in phyto- plankton spatial and temporal dynamics, and appeal for modern oceanographic technologies led Peppe to a novel No n- co mm er cia l u se on ly In memory of Peppe Morabito 245 research, He dreamed of realizing in lakes, starting from Maggiore and Orta, the experience of ships of opportu- nity, collecting in real time relevant environmental data by means of sensors deployed on moving vessels. keywords: alessandra; analysis; antonella; austoni; bresciani; buzzi; callieri; candia; cattaneo; chlorophyll; cnr; colleagues; comparative; congress; data; deep; development; dynamics; d’orta; earth; ecological; ecology; ecosystems; environmental; european; evolution; freshwater; garibaldi; giardino; high; hydrobiologia; international; istituto; italian; italy; laboratory; lago; lakes; large; limnol; limnology; long; maggiore; manca; methods; morabito; nco; oggioni; orta; pallanza; panzani; peppe; phytoplankton; primary; project; pugnetti; quality; recovery; research; ruggiu; salmaso; scientific; south; structure; studies; study; subalpine; technologies; term; thesis; trends; trophic; variables; water cache: aiol-7209.pdf plain text: aiol-7209.txt item: #108 of 143 id: aiol-7211 author: Quero, Grazia Marina; Luna, Gian Marco title: Surfing and dining on the “plastisphere”: Microbial life on plastic marine debris date: 2017-12-19 words: 6983 flesch: 58 summary: Here we review the knowledge on the microbial biodiversity and degradation mechanisms of marine plastic debris, and present data, based on metagenomic analyses, on the distribution patterns of genes potentially involved in microbially-mediated plastic degradation in coastal locations across the global ocean. Micro- bial hitchhikers on marine plastic debris: human exposure risks at bathing waters and beach environments. keywords: andrady; aquatic; assemblages; bacterial; bacteroidetes; biodegradation; biofilm; breakdown; bryant; bull; cia; coastal; colonizers; communities; community; composition; conventional; core; dang; data; debris; degradation; degrade; degrading; different; dioxygenase; distribution; early; environment; enzymes; et al; fate; fig; fragmentation; fragments; g.m; galgani; genes; global; gyre; harrison; hawaii; items; kegg; lee; life; litter; marine; marine environment; marine plastic; mechanisms; metagenomic; microbes; microbial; microorganisms; microplastics; moore; naples; nco; north; number; oberbeckmann; ocean; pacific; particles; pet; plastic; plastic debris; plastic degradation; plastisphere; poll; pollution; polyethylene; polymers; potential; presence; primary; processes; range; recent; research; results; review; samples; sci; sea; seafloor; seawater; secondary; sediments; sites; size; sources; studies; study; surface; taxa; technol; tender; terms; use; waste; waters; zettler cache: aiol-7211.pdf plain text: aiol-7211.txt item: #109 of 143 id: aiol-7221 author: Martens, Stefan title: Handbook of Cyanobacterial Monitoring and Cyanotoxin Analysis date: 2017-12-14 words: 323 flesch: 35 summary: Section VII gives several standard operating procedures around var- ious aspects of Cyanobacteria analysis. Therefore, the book should be part of any library of Cyanobacteria microbiologist and cyanotoxin chemist. keywords: analysis; book; cyanobacteria; cyanotoxin; handbook; monitoring; operating; procedures; section; standard cache: aiol-7221.pdf plain text: aiol-7221.txt item: #110 of 143 id: aiol-7232 author: Ruiz-González, Clara; Niño-García, Juan Pablo; Berggren, Martin; del Giorgio, Paul A. title: Contrasting dynamics and environmental controls of dispersed bacteria along a hydrologic gradient date: 2017-12-22 words: 8983 flesch: 54 summary: Key words: Dispersal; river continuum; environmental sorting; aquatic bacterial communities; Illumina sequencing. No n- co mm er cia l u se on ly 223C. Ruiz-González et al. rectional structuring of aquatic communities and a gradual decrease in taxonomic richness that has been observed both along individual rivers (Savio et al 2015) or across multiple unconnected aquatic sites (Ruiz-González et al., 2015a; Niño-García et al 2016a). keywords: abundance; acid; analysis; aquatic; assemblages; bacterial; bacterioplankton; berggren; biogeography; biolog; boreal; carbon; catchment; changes; cia; clear; communities; community; components; composition; conditions; continuum; contribution; crump; del; differences; different; dispersed; distance; diversity; doc; downstream; dynamics; environmental; et al; fig; freshwater; functional; garcía; garcía et; giorgio; gonzález; gonzález et; gradient; groups; headwater; hydrologic; illumina; isme; lakes; landscape; large; largest; likely; local; material; measured; metabolic; microbial; nco; niño; number; observed; order; organic; otus; patterns; pools; potential; present; profiles; quality; related; relative; residence; rivers; ruiz; sampled; sampling; seed; sequences; sites; smallest; soil; spring; strahler; streams; structure; summer; systems; taxa; taxonomic; terrestrial; time; total; tourist; type; variables cache: aiol-7232.pdf plain text: aiol-7232.txt item: #111 of 143 id: aiol-7266 author: Mukherjee, Jayati; Naidu, Sura A.; Sarma, V.V.S.S.; Ghosh, Tuhin title: Influence of river discharge on zooplankton diet in the Godavari estuary (Bay of Bengal, Indian Ocean) date: 2018-07-10 words: 8450 flesch: 58 summary: Mean isotopic ratios of δ13C and δ15N of several end members (C3 and C4 terrestrial plants, soil organic matter, fresh water algae, marine phytoplankton, estuarine phytoplankton, zooplankton) from drainage basin of the Godavari river were measured (Tab. 1) to separate and determine the percentage contribution of the live (autochthonous/in situ phytoplankton) and the detritral fractions (allochthonous/ex situ, dead organic matter) to the POM (Krishna et al., 2015). Hellings et al., 1999; Kao and Liu, 2000; Boschker et al., 2005; Bontes et al., 2006). keywords: 0.001; abundance; acta; algae; allochthonous; analysis; base; bay; biological; biomass; calanoida; carbon; changes; chl; chlorophyll; cia; coastal; composition; concentrations; consumers; contribution; cosmochim; cyclopoida; dam; dead; detrital; detritus; diet; discharge; dry; dry period; dynamics; ecol; ecosystem; estuaries; estuarine; estuary; et al; fig; food; fraction; freshwater; geochim; godavari; godavari estuary; herman; higher; importance; india; influence; inorganic; isotope; isotopic; krishna; kumar; landry; level; limnol; live; lower; l–1; marine; matter; mean; mesozooplankton; middelburg; model; monsoonal; mukherjee; nco; nitrogen; npc; nutrients; oceanogr; organic; organic matter; p<0.001; particulate; period; phytoplankton; plants; pom; pool; post; primary; production; ratio; reddy; relative; results; river; samples; sarma; sci; sea; shelf; siar; size; sources; sridevi; stable; structure; study; terrestrial; test; total; trophic; tropical; values; variability; variations; vvss; waters; web; wet; wet period; zooplankton; δ13c; δ15n; δ15nphytoplankton cache: aiol-7266.pdf plain text: aiol-7266.txt item: #112 of 143 id: aiol-7275 author: Cau, Alessandro; Bramanti, Lorenzo; Cannas, Rita; Moccia, Davide; Padedda, Bachisio Mario; Porcu, Cristina; Sacco, Flavio; Follesa, Maria Cristina title: Differential response to thermal stress of shallow and deep dwelling colonies of Mediterranean red coral Corallium rubrum (L., 1758) date: 2018-07-10 words: 4240 flesch: 54 summary: As concerns the survival rate, 75% of shallow colonies survived thermal stress, while only 12.5% (1 colony over 8) of deep colonies survived. Significant differences in necrosis were observed after 5 days, emphasizing a good tolerance to temperature increase for deep colonies. keywords: abbiati; bathymetric; beginning; biol; cau; cerrano; chambers; change; cia; coenosarc; colonies; colony; conditions; consumption; control; coral; corallium; costantini; days; deep; depth; differences; different; dwelling; ecol; effects; end; et al; experiment; fig; garrabou; genetic; higher; increase; mar; mass; mediterranean; mortality; nco; necrosis; oxygen; oxygen consumption; populations; previati; range; red; response; rossi; rubrum; samples; sea; shallow; significant; species; stress; temperature; test; thermal; tolerance; total; treatment; university; water cache: aiol-7275.pdf plain text: aiol-7275.txt item: #113 of 143 id: aiol-7389 author: Marchetto, Aldo; Sforzi, Tommaso title: Using benthic diatoms for estimating lake ecological quality: Comparing different taxonomic resolution date: 2018-07-10 words: 4771 flesch: 54 summary: The development of specific indices for the evaluation of lake ecological quality (Rott, 1999; Schaumburg et al., 2004; Flemish Environment Agency, 2009; Bennion et al., 2014) is more recent. Using benthic diatoms for estimating lake ecological quality: Comparing different taxonomic resolution Aldo Marchetto,* keywords: abundance; agency; assessment; average; basis; benthic; calibration; cia; classification; concentration; correlation; data; diatom; diatom index; diatom species; differences; different; ecological; ecological quality; environmental; epi; et al; european; evaluation; fig; framework; genera; good; gradient; high; higher; index; indicator; indices; intercalibration; italian; italy; kelly; lakes; large; list; l’genera; marchetto; mean; nco; new; phosphorus; phytobenthos; quality; resolution; results; rott; samples; set; species; specific; status; study; taxa; taxonomic; total; trophic; use; value; water; weighted; wfd cache: aiol-7389.pdf plain text: aiol-7389.txt item: #114 of 143 id: aiol-7576 author: Aduwo, Adedeji Idowu; Adeniyi, Israel Funso title: The heavy metals/trace elements contents of sediments from Owalla Reservoir, Osun State, Southwest Nigeria date: 2018-12-20 words: 7823 flesch: 61 summary: Heavy metal concentrations grouped the stations into five clusters. Therefore, clay and or- ganic matter content are often used to calculate ‘corrected’ background values for trace metal concentrations in soils and sediments (De-Saedeleer et al., 2010). keywords: activities; aduwo; agency; agricultural; analysis; anthropogenic; aquatic; area; arsenic; assessment; average; background; basin; cadmium; catchment; cia; concentrations; contamination; contents; crust; decena; degree; different; distribution; downstream; earth; effects; elements; elements contents; environmental; erosion; et al; factor; fig; geochemical; groups; guidelines; gupta; g–1; health; heavy; heavy metals; higher; human; laboratory; lake; lead; level; littoral; low; major; materials; matter; mean; metals; natural; nco; nigeria; open; organic; organisms; osun; owalla; owalla reservoir; pollutants; pollution; present; quality; range; region; reservoir; river; samples; sampling; sci; season; seasonal; sediments; significant; soil; sources; southwest; spatial; state; stations; study; surface; tab; trace; trace elements; trace metals; university; upstream; use; values; variations; water; world; µg g–1 cache: aiol-7576.pdf plain text: aiol-7576.txt item: #115 of 143 id: aiol-7580 author: Alvisi, Francesca; D'Alelio, Domenico title: Present and future of aquatic sciences: The perspective of AIOL scientific community for a priority roadmap over the next five years date: 2018-07-10 words: 9287 flesch: 47 summary: To help meet this need, within the 23rd Congress of the Italian Association of Oceanology and Limnology (AIOL; http://www.aiol.info/), entitled “Functioning, alteration and recovery of aquatic ecosystems: the aquatic sciences to understand global change and to make the citizens aware of it” (Cagliari, Italy, 26-29 September 2017), all participants, among which some renown experts in the field of aquatic sciences, were invited to give their contribution, via a shared and bottom-up built questionnaire, in assessing a set of actions needed to achieve an adaptive and proactive management of changes that the aquatic sciences are going to face in the next five years. To help meeting this need, within the 23rd Congress of the Italian Association of Oceanology and Limnology (AIOL; http://www. aiol.info/), entitled “Functioning, alteration and recovery of aquatic ecosystems: the aquatic sciences to understand global change and to make the citizens aware of it” (Cagliari, Italy, 26-29 September 2017), all participants, among which some of the leading national experts in the field of aquatic sciences, were invited to give their contribution in assessing a set of actions needed to achieve an adaptive and proactive management of changes that the aquatic sciences are going to face in the next five years, in order to match societal needs. keywords: actions; agriculture; aiol; alvisi; answers; applied; approach; aquaculture; aquatic; aquatic ecosystems; aquatic environments; aquatic sciences; areas; aspects; assessment; attention; basic; better; biodiversity; blue; carbon; challenges; changes; chemical; cia; citizens; climate; cluster; coastal; community; concern; congress; conservation; contamination; deep; degradation; development; directive; disciplines; earth; ecological; ecology; economic; economy; ecosystems; effects; energy; environmental; et al; european; extreme; fields; fig; food; framework; freshwater; functioning; fundamental; funding; future; general; global; group; health; human; iii; impact; importance; integrated; interest; issues; knowledge; land; limnology; main; management; marine; monitoring; national; natural; nco; need; new; ocean; perception; planning; pollution; possible; preferences; present; processes; production; quality; question; received; recovery; related; relative; research; resources; restoration; results; role; sciences; scientific; scientists; services; set; shared; skills; social; societal; society; spatial; species; specific; strong; structure; studies; study; survey; sustainable; tab; terms; terrestrial; topics; transitional; use; values; van; vulnerability; water; widespread; years cache: aiol-7580.pdf plain text: aiol-7580.txt item: #116 of 143 id: aiol-7601 author: Giani, Michele; Miquel, Juan Carlos; De Lazzari, Amelia; Boldrin, Alfredo title: Fluxes of particulate matter, carbonates, organic carbon and nitrogen in the northern Adriatic continental shelf: A synthesis overview date: 2018-12-07 words: 9734 flesch: 60 summary: Therefore, as observed in previous studies (Matteucci et al., 1997; Giani et al., 2001), the dominant part of the fluxes in the NAd can be attributed to resuspension processes or riverine inputs of allochthonus particulate organic matter. The “swimmers”, metazoan zooplankton that actively enter sediment traps and that do not contribute to the passive flux (Buesseler, 2007; Rizzo et al., 2009; Miquel et al., 2011), were removed manually under a dissecting microscope. keywords: accumulation; adige; adriatic; adriatic sea; annual; areas; available; average; bacino; basin; benthic; boldrin; campo; carbon; carbonates; cia; circulation; coastal; collected; composition; content; continental; contribution; cozzi; data; days; dei; del; different; discharges; downward; dynamics; d–1; eastern; end; estimate; estuar; et al; export; faganeli; fig; fluxes; fraction; geol; giani; giani et; gulf; higher; highest; inputs; italian; june; langone; lazzari; lower; mare; marine; mass; matter; mean; mediterranean; miquel; m–2; nad; nco; nitrogen; northern; northern adriatic; offshore; organic; organic carbon; organic matter; particles; particulate; particulate matter; period; phytoplankton; piave; primary; processes; prodelta; production; range; rates; ratio; related; respect; resuspension; river; riverine; sampling; sci; sea; seasonal; sediment; sediment traps; sedimentation; settling; shallow; shelf; sites; sperimentale; study; tab; temporal; time; tmf; total; transport; traps; trieste; turchetto; upper; values; variability; veneto; water; western; wind; winter; work cache: aiol-7601.pdf plain text: aiol-7601.txt item: #117 of 143 id: aiol-7857 author: Lopez-Soriano, Joaquin; Quiñonero-Salgado, Sergio; Cappelletti, Cristina; Faccenda, Filippo; Ciutti, Francesca title: Unraveling the complexity of Corbicula clams invasion in Lake Garda (Italy) date: 2018-12-20 words: 4718 flesch: 63 summary: Indeed, our results confirm the predictions made by Reyna et al. (2018), based on bioclimatic models and known distribution ranges of Corbicula species, who postulated that C. largillierti could potentially expand its invasive range to different countries in Europe, with likely sympatric occurrence in some places with C. fluminea and C. fluminalis. DISCUSSION With the new observation of C. leana and C. largillierti reported in this paper, Lake Garda Corbicula populations include at least four species, instead of the two previously cited (C. fluminea and C. fluminalis). keywords: america; analysis; bivalvia; brown; c. leana; cappelletti; cia; ciutti; clams; comparison; corbicula; corbiculidae; del; differences; different; distribution; ebro; et al; europe; fig; fluminalis; fluminea; france; freshwater; garda; height; invasion; invasive; italian; italy; lago; lake; lake garda; largillierti; leana; length; lópez; molecular; mollusca; morphological; morphometric; müller; nco; new; parameters; pigneur; populations; presence; quiñonero; range; ratio; reyna; river; salgado; scale; shell; significant; soriano; south; spain; spanish; species; specimens; tab; taxa; umbo; violet cache: aiol-7857.pdf plain text: aiol-7857.txt item: #118 of 143 id: aiol-7918 author: Consoli, Pierpaolo; Mangano, Maria Cristina; Sarà, Gianluca; Romeo, Teresa; Andaloro, Franco title: The influence of habitat complexity on fish assemblages associated with extractive platforms in the central Mediterranean Sea date: 2018-12-07 words: 6331 flesch: 65 summary: Does increased habitat complexity reduce predation and competition in coral reef fish assemblages? Vertical artificial structures as an alternative habitat for coral reef fishes in disturbed environments. keywords: abundance; analysis; andaloro; anderson; anthias; artificial; assemblages; associated; available; beets; benthic; biol; boops; bull; california; central; chromis; communities; community; complexities; complexity; consoli; coral; decommissioning; degrees; differences; different; ecol; effects; et al; extractive; fabi; factors; fig; fish; fish assemblages; fish species; fishes; gas; habitat; habitat complexity; hixon; ices; influence; internal; junction; large; legs; legs platforms; level; love; lsc; luckhurst; mangano; mar; marine; mean; mediterranean; medium; msc; natural; nco; offshore; oil; ormond; pavo; permanova; pillars; platforms; reef; reef fish; results; richness; rilov; roberts; sarà; scale; sci; sea; significant; spatial; species; structures; study; tab; taxa; thalassoma; values; visual; volume; water cache: aiol-7918.pdf plain text: aiol-7918.txt item: #119 of 143 id: aiol-7929 author: Rotta, Federica; Cerasino, Leonardo; Occhipinti-Ambrogi, Anna; Rogora, Michela; Seppi, Roberto; Tolotti, Monica title: Diatom diversity in headwaters influenced by permafrost thawing: First evidence from the Central Italian Alps date: 2018-12-20 words: 12643 flesch: 55 summary: Despite the limit posed by the small number of headwater surveyed, the present study confirms the results obtained by previous investigations on chemical features and biodiversity of permafrost-fed headwaters waters in the Central Alps (Thies et al., 2007, 2013, 2018; Ilyashuk et al., 2014; Lösch et al., 2015; Thaler et al., 2015), and provides new insight on aspects scarcely considered so far. The highest EC values detected in the present study (~500 μS cm–1) are comparable with those found in other catchments on crystalline bedrock of the Central Alps (Krainer et al., 2011; Thies et al., 2007, 2013; Lösch et al., 2015) and agree with the increasing observations that waters emerging from rock glaciers are characterized by higher solute concentrations (Colombo et al., 2018). keywords: abundance; active; addition; alpine; alps; altitude; analysis; areas; asl; assemblages; average; benthic; bertalot; biodiversity; bukhtiyarova; cantonati; catchments; central; century; change; chemical; chemistry; classification; climate; comparison; concentrations; conductivity; contact; content; contrary; correlation; cryosphere; data; diatom; diatom assemblages; diatom diversity; diatom samples; diatom taxa; differences; different; dimensions; direct; discharge; diversity; e.g.; ecological; effects; environmental; epilithic; epiphytic; epiphytic diatom; et al; eunotia; european; evidence; features; fed; fig; future; general; glacial; glacier; groundwater; grunow; habitat; headwaters; helveticum; high; higher; highest; hustedt; ice; importance; index; italian; krainer; kryal; kützing; lange; legendre; level; location; low; lower; lösch; l–1; m al; major; majority; mann; median; mesodon; metals; minutissimum; mountain; n.a; nmds; number; order; organic; origin; permafrost; perpusilla; physical; pom; precipitation; present; previous; process; psammothidium; quality; ref; ref1; ref2; relation; relative; rg1; rg2; rg3; rg4; rhithral; rhithral waters; richness; river; rock; rott; samples; sampling; scarce; sci; scores; set; shannon; significant; site; solda; species; springs; streams; studied; study; sub; supplementary; tab; taxa; taxon; temperature; test; thawing; thies; tolotti; total; trace; turbidity; valley; values; variability; variables; water; watershed cache: aiol-7929.pdf plain text: aiol-7929.txt item: #120 of 143 id: aiol-7949 author: Spicciarelli, Renato; Marchetto, Aldo title: The contrasting evolution of twin volcanic lakes (Monticchio, Mt. Vulture, Italy) inferred from literature records: Literature record of Monticchio lakes date: 2019-07-01 words: 7853 flesch: 66 summary: Anthropogenic pressure strongly increased in the 19th cen- tury, when forest surface was reduced because of tree cut- ting for using wood for railroad construction, and agriculture development, using lake water for irrigation. Beside precipitation in the catch- ment, Monticchio lakes, and in particular LP, are also fed by a heterogenous volcanic aquifer, with alternatively high and low permeability structures and several under- ground water divides (Celico and Summa, 2004). keywords: abundance; activities; algal; analysis; anoxic; area; assemblages; available; azzella; basilicata; biomass; boll; brauer; caldera; caracausi; carvalho; ceccanti; ceccanti et; central; century; changes; chemistry; cnr; co2; concentration; conditions; contrary; data; december; deep; dei; del; della; depth; different; d’aprile; ecological; environmental; et al; european; eutrophication; example; fig; forti; grande; grotticelle; high; historical; history; human; increase; indicator; iron; ise; italian; italy; june; laghi; lago; lago grande; lakes; large; limnological; literature; long; low; lower; l–1; macrophyte; marano; marchetto; maximum; measured; methods; mirauda; mmgd; monte; monthly; monticchio; monticchio lakes; morabito; naples; nco; nicolosi; number; nutrient; pattern; permission; phosphorus; phytoplankton; piccolo; potenza; presence; pressure; principe; profiles; reale; recent; record; redrawn; reference; regione; relevant; res; right; samples; sampling; seasonal; secchi; september; southern; species; spicciarelli; status; stegagno; strong; studies; study; summer; surface; tab; temperature; term; total; transparency; trophic; trotter; values; vegetation; volcanic; volcano; vulture; water; winter; wulf; zooplankton cache: aiol-7949.pdf plain text: aiol-7949.txt item: #121 of 143 id: aiol-8169 author: Moccia, Davide; Cau, Alessandro; Meloni, Maria Carmela; Pusceddu, Antonio title: Small-scale distribution of metazoan meiofauna and sedimentary organic matter in subtidal sandy sediments (Mediterranean Sea): Small-scale distribution of coastal meiofaunal assemblages and sedimentary organic matter date: 2019-07-01 words: 6960 flesch: 59 summary: However, while the scales of spatial variability for macrobenthos are well known, those of meiofauna and prokaryotes are still mat- ter of debate (Danovaro et al., 2001; Fontaneto and Hor- tal, 2012; Moens et al., 2013; Pusceddu et al., 2014; Prat et al., 2015). This latter hypothesis is consistent with previous findings from micro-scale distribution analyses (Danovaro et al., 2001), that identified sandy ripples and marks as the sedimentary structures - shaped by waves motion in shallow waters - that are most responsible for the micro-distribution pat- terns of benthic phytopigments. keywords: absence; abundance; analysis; assemblages; autocorrelation; benthic; biochemical; biodiversity; biopolymeric; bpc; carbohydrate; chlorophyll; cia; coastal; composition; contents; copepods; danovaro; data; different; distribution; ecol; et al; fig; fisher; frame; gasteropods; gastrotrichs; hydrodynamic; index; lipid; marine; matter; mediterranean; meiofaunal; micro; nco; nematodes; nutritional; oligochaetes; organic; patchy; pattern; phytopigments; polychaetes; presence; protein; pusceddu; quality; quantity; random; results; sampling; sandy; scale; sea; sedimentary; sediments; significant; size; small; source; spatial; species; station; study; tab; total; transect; trophic; variability; variance; variation cache: aiol-8169.pdf plain text: aiol-8169.txt item: #122 of 143 id: aiol-8177 author: Vecchioni, Luca; Marrone, Federico; Naselli-Flores, Luigi title: On the occurrence and distribution of Calanipeda aquaedulcis Kritschagin, 1873 (Copepoda, Calanoida, Pseudodiaptomidae) in Sicily, Italy, with some notes on coexistence and species replacement in calanoid copepods: Calanipeda aquaedulcis in Sicily date: 2019-05-27 words: 4473 flesch: 70 summary: As a consequence of volume loss, water bodies can experience deep changes in their chemical and physical characteristics; local extinction of taxa and changes in the biological structure of aquatic communities due to species replacements may therefore occur. This widespread copepod is known to occur from the circum-Mediterranean area to the Black and Caspian seas regions, where it occurs mostly in brackish, coastal, large water bodies (Błędzki and Rybak 2016), although it is also known to occur in freshwater lakes (Marrone et al., 2019). keywords: april; aquaedulcis; aquatic; authors; available; barone; biological; biviere; bodies; brackish; c l; calanipeda; calanoid; calvo; century; changes; cia; cimia; cm–1; coastal; communities; conductivity; copepoda; copidodiaptomus; crustacean; della; distribution; disueri; et al; extinction; fauna; flores; freshwater; gela; hydrobiologia; inland; italian; italy; jeppesen; lake; marrone; mediterranean; naselli; nco; numidicus; occurrence; palermo; parvum; ponds; population; present; reservoirs; ruffo; samples; shallow; sicilian; sicily; sites; species; stella; stoch; structure; values; water; zooplankton cache: aiol-8177.pdf plain text: aiol-8177.txt item: #123 of 143 id: aiol-8198 author: Baklagin, Vyacheslav N. title: Variations of indicative dates of ice regime on Lake Onego based on ground air temperature: Ice regime on Lake Onego date: 2019-06-25 words: 5116 flesch: 55 summary: Furthermore, a ±1°C fluctu- ation of average air temperature leads to a ±4-6 days shift of the freeze-up dates and a ±3-4 days shift of the break-up dates (Efremova et al., 2013). °C and complete ice clearance, ±3 days/°C) of the ice regime in Lake Onego depending on changes in average air temperature within the preceding two-month periods (autumn and spring). keywords: air; air temperature; april; average; average air; beginning; break; clearance; complete; complete ice; correlation; cover; data; dates; days; duration; efremova; formation; freeze; ice; ice cover; ice phenomena; ice regime; indicative; indicative dates; lake; lake onego; max; meteorological; nazarova; negative; onego; p<0.05; period; petrozavodsk; phase; phenomena; positive; regression; salo; satellite; study; tab; temperature; values; water; years; ∑tfree; ∑tice cache: aiol-8198.pdf plain text: aiol-8198.txt item: #124 of 143 id: aiol-8240 author: Manna, Vincenzo; Del Negro, Paola; Celussi, Mauro title: Modulation of hydrolytic profiles of cell-bound and cell-free exoenzymes in Antarctic marine bacterial isolates: Cell-bound and cell-free enzymatic profiles of pelagic marine bacteria date: 2019-06-25 words: 7795 flesch: 57 summary: At t3 and t6 samples for the enumeration of bacterial cells were col- lected and fixed with 0.2-µm filtered dolomite-buffered for- malin (2% f.c.). In fact, measurable organic matter degra- dation rates have been found in all marine environments where life is possible, from deep subsurface sediments (Hoarfrost et al., 2017) through the water column (Hoppe and Ullrich, 1999; Celussi et al., 2018), to sea spray aerosol particles ejected to the atmosphere (Malfatti et al., 2019), form the equator to the poles (Misic et al., 2006; Celussi et al., 2009). keywords: 16_1_1; 2012; abundance; activities; activity; alkaline; ama; amol; arnosti; associated; azam; bacteria; bacterial isolates; basin; bglu; carbon; cell; cellfree; cell–1; celussi; chit; chlorophyll; cia; concentration; conditions; constant; contribution; deep; degradation; dexp; dfin; different; drygalki; ecol; environ; environment; enzymes; et al; exoenzymatic; exoenzymes; experimental; extracellular; fasw; fig; fraction; free; glucosidase; glycolytic; growth; high; higher; hoppe; hydrolysis; h–1; isolates; joides; layer; leucine; lip; living; lower; marine; matter; maximum; medium; microbes; microbial; model; nco; nmds; ocean; order; organic; particles; pattern; pelagic; phosphatase; phylogenetic; phytodetrital; poor; potential; production; profiles; proteolytic; rates; res; results; rich; ross; samples; sea; seawater; specific; standard; strains; substrates; sur; tab; temperature; tested; time; total; tubes; water cache: aiol-8240.pdf plain text: aiol-8240.txt item: #125 of 143 id: aiol-8286 author: Flaim, Giovanna; Ciutti, Francesca title: Remembering Alvise Vittori (Riva del Garda 1932 – Trento 2018) date: 2019-05-27 words: 1641 flesch: 66 summary: No n- co mm er cia l u se on ly Remembering Alvise Vittori 17 Vittori A, Siligardi M, Pinamonti V, Flaim G, Leonardi G, 1985. Layout 1 Dr. Alvise Vittori was a well-known Italian ichthyologist, limnologist and all-round ecologist. keywords: aiiad; alp; alvise; biological; edmund; esp; fish; fisheries; flaim; fondazione; garda; italian; italy; lake; leonardi; limnological; limnology; mach; management; monitoring; nat; national; observations; pinamonti; pontalti; province; public; ric; san; siligardi; trentino; trento; vittori cache: aiol-8286.pdf plain text: aiol-8286.txt item: #126 of 143 id: aiol-8522 author: Andong, Felix Atawal; Ezenwaji, Ngozi Evelyn; Melefa, Temitope Dadewura; Hinmikaiye, Funmilayo Faith; Nnadi, Obiechina Vitus; Oluwafemi, Olasoji title: Assessment of the physico-chemical properties of Oguta Lake compared to the established values of the Federal Ministry of Environment, Nigeria: Water quality of Lake Oguta, Nigeria date: 2019-12-11 words: 4654 flesch: 63 summary: Bacteriological and physiochemical analysis of Oguta Lake water, Imo State Nigeria. Assessment of water quality parameters of lower Lake, Bhopal. keywords: adeniyi; aduwo; ahiarakwem; akaegbobi; annual; aquatic; assessment; awoyemi; biological; bod; calcium; chemical; chloride; cia; concentrations; current; demand; differences; doi; drinking; environ; et al; federal; july; june; lake; level; limit; l–1; magnesium; mg l–1; ministry; months; nco; nfor; nigeria; nitrate; oguta; oxygen; parameters; phosphate; physical; physico; properties; quality; range; resources; sci; significant; sodium; standard; state; station; studies; study; sulphate; surface; temperature; test; university; values; water; water quality cache: aiol-8522.pdf plain text: aiol-8522.txt item: #127 of 143 id: aiol-8617 author: Peddio, Stefania; Sollai, Giorgia; Podda, Cinzia; Frau, Giacomo; Palmas, Francesco; Sabatini, Andrea; Crnjar, Roberto; Solari, Paolo title: The success in the short-distance communication for mating does not depend on chemical signals in the crustacean decapod Procambarus clarkii (Girard, 1852): Mating behaviour in the red swamp crayfish date: 2019-12-11 words: 4459 flesch: 53 summary: However, a number of studies on the use of pheromones in crayfish mating behaviour produced contradictory results, suggesting that crayfish do not necessarily communicate their sex chemically (Itagaki and Thorp, 1981; Thorp, 1984). In terms of the duration of each of the five phases of crayfish mating behaviour (Fig. 2), we found that blocking urine release did not affect animal orientation (Ph1) (F[1.15] = 0.0916; P=0.77), which is the initial, critical phase of the mating process, in which the crayfish begin to approach each other. keywords: animals; antennules; aquiloni; behaviour; biol; breithaupt; chemical; cia; clarkii; communication; contact; control; crayfish; crustaceans; deposition; detection; different; discrimination; distance; duration; experimental; female; gherardi; intact; interactions; invasive; lack; leniusculus; males; mating; mating behaviour; moore; mounting; nco; orientation; p. clarkii; pairs; phases; pheromones; procambarus; recognition; red; release; reproductive; sex; sexes; sexual; short; signals; species; spermatophore; stebbing; study; success; swamp; thorp; urine; use; way cache: aiol-8617.pdf plain text: aiol-8617.txt item: #128 of 143 id: aiol-8621 author: Móréh, Ágnes; Jordán, Ferenc title: Comparing community response indices in aquatic food web models: Aquatic food web models date: 2019-12-31 words: 5152 flesch: 58 summary: It means that using sign always underestimates the strength of perturbation effects because of the changes with opposite sign cancelling each other out. There are local indices not taking indirect effects into account (e.g., D), while there are meso-scale or non-local indices (e.g., centralities). keywords: 2019; account; analysis; aquatic; better; biomass; case; changes; cia; cii; community; correlation; different; dynamical; ecol; effects; fii; food; functions; higher; importance; index; indices; indirect; interaction; isii; jordán; keystone; kni; large; models; móréh; nco; network; okey; original; perturbation; perturbed; pii; rate; response; results; self; sign; species; strength; stronger; structural; system; tab; topological; trophic; types; values; variants; web; webs cache: aiol-8621.pdf plain text: aiol-8621.txt item: #129 of 143 id: aiol-8622 author: Leoni, Barbara; Spreafico, Morena; Patelli, Martina; Soler, Valentina; Garibaldi, Letizia; Nava, Veronica title: Long-term studies for evaluating the impacts of natural and anthropic stressors on limnological features and the ecosystem quality of Lake Iseo: Responses to local and global stressors in Lake Iseo date: 2019-12-19 words: 9122 flesch: 56 summary: Layout 1 INTRODUCTION Lake Iseo is one of the deepest lakes south of the Alps, one of the largest Italian lacustrine basins, and an impor- tant resource for agriculture, industry (manufacturing and building centers are its peculiarities), fisheries, and drink- ing water, as well as for recreation and tourism. The lake is characterized by a high ratio between watershed area and lake surface (28.46); this feature, along with the mean annual precipitation value, which is about 900 mm y–1, strongly influences the characteristics of Lake Iseo, par- ticularly the theoretical renewal time that is about four years (Ambrosetti and Barbanti, 1999) (Fig. 1). keywords: air; analysis; anthropogenic; aquatic; bettinetti; buzzi; changes; chemical; cia; climate; climatic; column; community; complete; concentrations; conditions; continuous; cyanobacteria; daphnia; data; decades; decrease; deep; depth; different; discrete; dissolved; distribution; doi; doi:10.1016; dsi; dsls; dynamics; ecological; ecosystem; effects; environ; environmental; epilimnetic; et al; eutrophication; evolution; food; future; garibaldi; global; growth; high; hydrobiologia; hypolimnetic; impact; important; increase; investigations; iseo; italian; italy; knowledge; lake; lake iseo; large; layers; leoni; leoni et; limnol; load; local; long; lugano; l–1; maggiore; manca; microplastics; mixing; monitoring; morabito; mosello; nava; nco; northern; nutrient; observed; ongoing; oxygen; parameters; particular; patelli; patterns; pelagic; period; phosphorus; physical; phytoplankton; pollutants; population; presence; quality; replenishment; research; responses; river; rogora; salmaso; salmaso et; sampling; sci; south; species; spring; stressors; studies; study; subalpine; summer; surface; temperature; term; thermal; time; total; trophic; value; variability; vertical; water; web; winter; years; zooplankton cache: aiol-8622.pdf plain text: aiol-8622.txt item: #130 of 143 id: aiol-8677 author: Cerasino, Leonardo; Salmaso, Nico title: Co-occurrence of anatoxin-a and microcystins in Lake Garda and other deep subalpine lakes: Co-occurrence of anatoxin-a and microcystins in Lake Garda date: 2020-05-12 words: 6818 flesch: 63 summary: (Cerasino et al., 2017; Salmaso, 2019; Salmaso et al., 2018a). No n- co mm er cia l u se on ly L. Cerasino and N. Salmaso18 outcompeting the MCs producer P. rubescens in Lake Garda and in other DSL (Salmaso et al., 2018b; Salmaso et al., 2016). keywords: abundances; alkaloids; analysis; anatoxin; asp3]-rr; atx; atxs; boscaini; bourrellyi; capelli; cerasino; changes; cia; climate; codd; como; concentrations; considered; cyanobacteria; cyanotoxins; data; decrease; deep; depth; different; distribution; diversity; doi; dsl; effects; et al; eutrophication; factors; fig; garda; higher; highest; ibelings; importance; iseo; italian; june; lake garda; lake iseo; lake lugano; lakes; large; layer; levels; long; lower; lugano; l–1; management; mcs; meriluoto; microcystins; monthly; months; nco; ng l–1; peaks; perialpine; period; planktothrix; presence; present; reads; research; risk; rubescens; salmaso; salmaso et; species; strains; study; term; total; toxic; toxins; trend; tychonema; values; variants; water; years cache: aiol-8677.pdf plain text: aiol-8677.txt item: #131 of 143 id: aiol-8743 author: Javid, Pegah; Zadabbas Shahabadi, Hassan; Amirkhani, Homeyra; Amrollahi, Narges; Ranjbar, Mohammad Sharif title: Isolation and identification of halophilic and halotolerant bacteria from the sediments of the Qeshm Island mangrove forest: Phylogeny of bacterial community of mangrove forest sediments date: 2020-05-12 words: 7243 flesch: 57 summary: Layout 1 INTRODUCTION Mangrove forests are located in intertidal and transitional zones between aquatic and terrestrial environments (Lee et al., 2006) with special ecological conditions (Thu and Populus, 2007) and occur in up to 70% of tropical and subtropical coastlines worldwide. According to the microorganism’s ranges of salinity tolerance, they are categorized into three groups: slightly, moderately and extremely halophiles (Ventosa et al., 2006; Zhang et al., 2014). keywords: 16s; ability; accession; acid; activity; aerobic; agar; alk; analysis; bacillus; bacillus licheniformis; bacillus sp; bacillus velezensis; bacteria; biochemical; biotechnol; blast; bootstrap; broth; catalase; characteristics; characterization; cia; clade; colonies; community; concentrations; conditions; culture; different; diversity; dna; dunlap; ecological; environments; et al; evol; extreme; features; fig; forests; genus; genus bacillus; gram; groups; growth; halophilic; halotolerant; high; hypersaline; identification; identity; int; iran; island; isolated; kaur; kim; licheniformis; mangrove; marine; maritimus; medium; methods; microbiol; microbiology; microorganisms; min; molecular; nacl; nco; negative; nov; number; nutrient; oxidase; paralicheniformis; pcr; pg-1; pg-2; pg-3; pg-4; pg-5; phylogenetic; plakortidis; planococcus; positive; production; products; qeshm; rdna; results; salinity; salt; sci; sediments; soil; species; staining; strains; studies; study; subtilis; syst; tab; test; time; tolerance; tree; urease; value; variable; velezensis; water; yoon; zhang; zone cache: aiol-8743.pdf plain text: aiol-8743.txt item: #132 of 143 id: aiol-8781 author: Moccia, Davide; Salvadori, Luca; Ferrari, Simone; Carucci, Alessandra; Pusceddu, Antonio title: Implementation of the EU ecological flow policy in Italy with a focus on Sardinia date: 2020-06-09 words: 10225 flesch: 47 summary: However, pure hydrology-based methodologies for e-flows assessment incompletely capture habitat dynamics and ecological responses of aquatic and riparian fauna. A spatial downscaling process of e-flow assessment will require new quantitative and qualitative approaches involving a multidisciplinary panel of experts (e.g., engineers, hydrologists, hydraulic modellers, ecologists and socio-economists) but also a large effort to test, by an accurate monitoring plan, the reliability and efficacy of the estimated e-flow values in the field. keywords: accurate; acreman; alteration; analysis; annual; application; applied; approach; aquatic; area; arthington; assessment; authorities; availability; average; basin; bodies; brown; catchment; challenges; change; cia; climate; coefficient; commission; complex; concept; conditions; conservation; context; criteria; critical; current; dams; data; definition; determination; development; different; directive; document; ecological; ecological flow; economic; ecosystems; eds; environmental; environmental flow; et al; european; events; experimental; fish; flow; flow assessment; focus; formula; framework; freshwater; future; giorgi; global; good; guidance; habitat; high; holistic; horne; human; hydraulic; hydrological; hydrology; implementation; information; instream; integrity; italian; italy; king; knowledge; large; life; limitations; maintenance; management; mean; mediterranean; mesohabsim; methodologies; methodology; methods; micro; moccia; modelling; models; monitoring; monthly; morphological; mvf; national; natural; natural flow; nature; nco; need; new; number; order; outflow; parameter; parasiewicz; particular; phabsim; plans; poff; policy; pressures; process; quality; regime; regional; regions; release; reliable; report; requirements; resources; response; review; richter; river; riverine; sardinia; scale; sci; science; significant; simulation; site; spatial; species; specific; stages; status; streams; studies; study; suitability; surface; territory; tharme; time; timing; trout; use; values; vezza; vital; water; water flow; wfd; years cache: aiol-8781.pdf plain text: aiol-8781.txt item: #133 of 143 id: aiol-8961 author: Armeli Minicante, Simona; Piredda, Roberta; Finotto, Stefania; Bernardi Aubry, Fabrizio; Acri, Francesco; Pugnetti, Alessandra; Zingone, Adriana title: Spatial diversity of planktonic protists in the Lagoon of Venice (LTER-Italy) based on 18S rDNA date: 2020-06-29 words: 6671 flesch: 60 summary: Water residence time, resulting from the interactions of tide, wind and topography, ranges from a few days close to the inlets to one month in land- ward areas (Umgiesser et al., 2014; Ghezzo et al., 2015). This TWE belongs to the Long Term Ecosystem Re- search (LTER) national (LTER-Italy), European (LTER- Europe) and global (ILTER) networks, which are essential components of the worldwide efforts to improve our knowledge of the structure and functions of ecosystems and of their long-term response to environmental, societal, and economic drivers (Mirtl et al., 2018). keywords: 18s; abundance; abundant; acri; analysis; april; area; armeli; aubry; aubry et; bacillariophyta; benthic; bernardi; bianchi; characterized; chl; cia; ciliophora; coastal; communities; community; composition; contribution; cryptophyceae; dataset; dates; della; depth; diatoms; differences; different; dinophyta; diversity; doi; dominance; ecosystems; environmental; et al; european; february; fig; groups; habitat; heterogeneity; high; higher; highest; hts; italian; italy; july; lagoon; lov; low; lter; main; marine; mediterranean; metabarcoding; microbiol; minicante; nco; november; number; otus; overall; phytoplankton; piredda; planktonic; protist; protistan; pugnetti; reads; research; samples; sampling; sci; seasonal; sequencing; sfriso; sites; socal; spatial; species; st1; st2; st3; st5; stations; structure; sts1; sts2; studies; study; syndiniales; taxa; taxonomic; temporal; time; total; transitional; values; variability; variables; venice; waters; years; zingone cache: aiol-8961.pdf plain text: aiol-8961.txt item: #134 of 143 id: aiol-9099 author: Ezzeline, Jade A.; Desdevises, Yves; Jacquet, Stéphan title: Exploring archaeal and bacterial diversity and co-occurrence in Lake Geneva: Lake microbial statistical interactions date: 2020-12-21 words: 9093 flesch: 59 summary: The primers, namely for- ward primer 515F (GTGYCAGCMGCCGCGGTA) (Wang and Qian, 2009) and reverse primer 909R (CCC- CGYCAATTCMTTTRAGT) (Wang et al., 2018) had tags attached to them. Woe- searchaeota are widely spread in diverse environments and (Liu et al., 2018) reported a syntrophic relationship between Woesearchaeota and other methanogenic ar- chaea. keywords: 16s; abundance; actinobacteria; addition; alpha; alphaproteobacteria; ammonia; analysis; appl; archaeal; archaeal otu; august; bacteria; bacterial otus; bacteroidetes; berdjeb; beta; casamayor; cca; chloroflexi; class; communities; community; concentrations; data; deep; depth; differences; different; diversity; dna; dominant; ecological; ecosystems; environ; environmental; et al; ezzedine; february; fig; filters; final; freshwater; fuhrman; functional; gammaproteobacteria; geneva; genome; genus; hand; high; higher; highest; identity; important; indices; interactions; j.a; jacquet; june; kos; lake; links; liu; low; marine; mean; methane; microbiol; microorganisms; min; nanoarchaeaeota; network; nitrogen; nitrososphaeria; noteworthy; number; observed; occurrence; oksanen; order; organic; otus; oxidizing; oxygen; package; parada; pcr; phosphorus; phyla; phylum; physicochemical; pipeline; possible; present; primers; profiles; prokaryotes; proteobacteria; pt4; reads; relationships; relative; results; rrna; samples; score; seasons; sequences; sequencing; set; shared; significant; simpson; sites; statistical; step; structure; studies; study; supplementary; surface; table; taxonomic; test; thaumarchaeota; total; tubes; value; variables; variety; vsearch; wang; woesearchaeota; µl–1 cache: aiol-9099.pdf plain text: aiol-9099.txt item: #135 of 143 id: aiol-9119 author: Roubeix, Vincent; Attia, Lucie; Chavaux, Rémy; Very, Frank; Olivier, Anthony; Ector, Luc; Vassal, Véronique title: Specificity of diatom communities attached on the carapace of the European pond turtle (Emys orbicularis) date: 2021-03-29 words: 6466 flesch: 57 summary: However, turtle carapace communities differed in epilithic and epiphytic communities in only the two most inland sites (Sav and Ver) (Fig. 3). DISCUSSION Epizoic diatoms were present on the carapace of Emys orbicularis, as previously observed on other freshwater (Donato et al., 2018) and marine (Robinson et al., 2016) turtle species. keywords: abundance; algae; analysis; animal; benthic; bergey; bertalot; biofilm; carapace; case; cha; classification; common; communities; community; composition; data; diatom; diatom communities; differences; different; distance; doi; ecological; ecology; emys; environment; epibionts; epibiosis; epilithic; epiphytic; epizoic; epizoic communities; epizoic samples; esq; et al; european; fig; forms; france; freshwater; functional; groups; habitat; host; indicator; individuals; lange; level; life; living; luticola; macrophytes; marine; mixed; navicula; new; non; orbicularis; planktonic; pond; pond turtle; populations; present; robinson; roubeix; samples; sampling; sav; significant; sites; species; specific; specificity; stones; study; substrates; tab; tar; taxa; trivialis; turtle; turtle carapace; turtle species; types; van; vassal; ver; wahl; water; wetzel cache: aiol-9119.pdf plain text: aiol-9119.txt item: #136 of 143 id: aiol-9471 author: Podda, Cinzia; Palmas, Francesco; Cabiddu, Serenella; Pesci, Paola; Sabatini, Andrea title: Exploring relationships between the distribution of giant red shrimp Aristaeomorpha foliacea (Risso, 1827) and environmental factors in the Central-Western Mediterranean Sea: Relationships between distribution of giant red shrimp and environmental factors date: 2020-12-30 words: 5936 flesch: 62 summary: Other authors have analysed the effects of different hydrological con- ditions (i.e., depth, temperature and salinity) on the species’ distribution (Yahiaoui, 1994; Cau et al., 2002; Politou et al., 2004; Sardà et al., 2004; Company et al., 2008; Eumofa, 2019). The giant red shrimp Aristaeomorpha foliacea (Risso, 1827) is one of the key species in Mediterranean deep-sea benthic communities and it is also one of the most impor- tant target species for Mediterranean bottom trawling (Cau et al., 2002; Guillen et al., 2012; Rinelli et al., 2013, Palmas et al., 2017a). keywords: abundance; additive; antennatus; area; aristaeomorpha; aristeus; average; basin; bianchini; biol; bot_sal; cartes; cau; central; changes; cia; data; deep; demersal; density; depth; distribution; d’onghia; eastern; effects; environmental; et al; factors; fig; fish; fisheries; fishery; fishing; foliacea; follesa; gams; generalized; giant; giant red; guijarro; hydrological; influence; intermediate; ionian; kapiris; levantine; liw; lon; longitudinal; maiorano; mar; mediterranean; mediterranean sea; model; nco; northern; oceanogr; palmas; politou; psu; ragonese; red; red shrimp; regression; relationships; relini; response; results; rinelli; risso; sabatini; salinity; sardinia; sardà; sci; sea; seas; shrimp; southern; spatial; spatio; species; tab; temperature; temporal; trawl; values; variables; water; western; wood cache: aiol-9471.pdf plain text: aiol-9471.txt item: #137 of 143 id: aiol-9500 author: Satta, Cecilia Teodora; Reñé, Albert ; Padedda, Bachisio Mario; Pulina, Silvia; Lai, Giuseppina Grazia; Soru, Oriana; Buscarinu, Paola; Virdis, Tomasa; Marceddu, Salvatore; Lugliè, Antonella title: First detection of the bloom forming Unruhdinium penardii (Dinophyceae) in a Mediterranean reservoir: insights on its ecology, morphology and genetics: Unruhdinium penardii in a Mediterranean reservoir date: 2021-01-07 words: 8509 flesch: 62 summary: All Unruhdinium species except U. jiulongensis (Gu) Gottschling and U. armebeense (Ten-Hage, K.P. Da, Couté) Moestrup et Calado, were reported as high biomass bloom formers in various lakes and reservoirs worldwide (Rodriguez et al., 1999; Liu et al., 2008; Takano et al., 2008; Zhang et al., 2011; Zhang et al., 2014), including some Italian alpine lakes (Hansen and Flaim, 2007). No n- co mm er cia l u se on ly C.T. Satta et al.72 Padedda et al., 2017). keywords: absence; analysis; antapical; apical; area; available; axiovert; blooms; c.t; calado; carl; cedrino; cedrino lake; cells; characterization; china; chla; chlorophyll; cia; collected; cond; cultures; cysts; data; densities; density; depth; determined; diatom; differences; different; dinoflagellates; dinophyceae; durandii; ecological; ecology; endosymbiont; environmental; et al; events; field; fig; fixed; flaim; freshwater; genus; gottschling; hansen; harmful; highest; italy; jiulongensis; jul; kryptoperidiniaceae; lake; layers; light; liu; lsu; lugliè; l–1; mariani; maximum; mediterranean; model; moestrup; molecular; morphological; morphology; nco; new; niei; nutrient; observations; observed; ornamentation; padedda; penardii; peridiniopsis; period; phosphorus; phycol; phylogenetic; phylogeny; phytoplankton; plate; po4; positions; presence; primers; prominent; rdna; regions; relationship; reservoir; rodriguez; role; samples; sampling; sardinia; satta; sechi; sediment; sequences; shape; significant; species; spines; ssu; strains; study; sulcal; supplementary; support; surface; tab; temperature; theca; unruhdinium; unruhdinium penardii; values; view; water; zeiss; zhang cache: aiol-9500.pdf plain text: aiol-9500.txt item: #138 of 143 id: aiol-9508 author: Pugnetti, Alessandra title: Voices from the water: experience, knowledge, and emotions in long-term ecological research (LTER Italy) date: 2020-12-21 words: 8495 flesch: 59 summary: Aiming at making the public more familiar with the different LTER ecosystems and with the LTER vision and aims, LTER-Italy researchers planned and realized, from 2015 to 2019, the informal science-communication initia- tive called Cammini LTER (D’Alelio et al., 2016; Bergami et al., 2018; L’Astorina et al., 2018a; Pugnetti et al., 2019). The initiatives realized in the trails covered most of the communication typologies mentioned in the literature (Bergami et al., 2018; L’Astorina et al., 2018b; Pugnetti et al., 2019). keywords: activities; adriatic; affective; alpine; analysis; approach; aquatic; beings; bergami; biodiversity; books; broad; cammini; change; cia; climate; cnr; coastal; cognitive; communication; community; data; deep; della; different; dynamics; d’alelio; earth; ecological; ecological research; ecology; ecosystems; eds; emotions; environ; environmental; essential; et al; european; experience; field; fig; freshwater; future; global; gulf; human; information; inner; italian; italy; knowledge; lagoon; lake; lake x; level; local; long; lter; lter sites; l’astorina; management; marine; mediterranean; mind; mirtl; monitoring; morabito; mountain; multiple; naples; natural; nature; nco; necessary; networks; new; northern; open; organisms; paper; past; patterns; plankton; process; public; pugnetti; research; researchers; rete; rogora; role; scale; science; scientific; scientists; series; share; sharing; shelf; sites; social; society; socio; studies; study; subalpine; sustainability; term; terrestrial; time; total; vanderbilt; variables; vision; voices; wamsler; water; wide; words; world; years cache: aiol-9508.pdf plain text: aiol-9508.txt item: #139 of 143 id: aiol-9811 author: Manea, Elisabetta ; Bergami, Caterina; Bongiorni, Lucia; Capotondi , Lucilla; De Maio, Elisabeth; Oggioni, Alessandro; Pugnetti, Alessandra title: A transnational marine ecological observatory in the Adriatic Sea to harmonize a fragmented approach to monitoring and conservation date: 2021-07-02 words: 10465 flesch: 67 summary: In this context, ECOAdS gives the opportunity to de- fine and adopt an agreed conceptual framework, to har- monize existing environmental observations, monitoring schemes, and descriptive indicators (Manea et al., 2020; Fig. 2), thus contributing at providing a complete picture of the state of the marine environment, and at supporting transnational cooperation between Italy and Croatia in the Adriatic Sea. Indeed, in this area an integrated sys- tem that coordinates the diverse monitoring efforts is ab- sent (Manea et al., 2020). keywords: 7!$; achievement; activities; adriatic; analysis; approach; aquatic; areas; assessment; available; biodiversity; cia; coastal; commission; connectivity; conservation; context; cooperation; council; criteria; croatia; data; design; development; different; directives; ecoads; ecological; ecosystem; effective; elements; environment; essential; et al; european; framework; future; goals; good; habitats; human; implementation; indicators; information; initiatives; instruments; italy; knowledge; legal; level; long; main; management; manea; marine; meos; monitoring; msfd; n2k; natural; nature; nco; need; network; objectives; observations; observatory; oceanographic; policy; pressures; programs; protection; quality; related; requirements; research; scale; sci; science; sea; services; set; setting; sites; spatial; species; specific; state; status; strategies; strategy; support; sustainable; synergies; systems; targets; term; transboundary; transnational; variables; water; weaknesses; web; wfd cache: aiol-9811.pdf plain text: aiol-9811.txt item: #140 of 143 id: aiol-9947 author: Vecchioni, Luca; Arculeo, Marco; Marrone, Federico title: Molecular data attest to the occurrence of autochthonous Daphnia pulex (Crustacea, Branchiopoda) populations in Sicily, Italy date: 2021-12-07 words: 4287 flesch: 63 summary: In light of these results, the hypothesis by Marrone et al. (2009) that Si- cilian D. pulex populations are relictual elements that colonised Sicily during the late Pleistocene glacial events, coming from the Balkan peninsula or northern Italy, and which later found a “cool” refuge at higher altitude with the onset of warmer and low-moisture climatic conditions in the early Holocene (Curry et al., 2016), seems to be supported. Italy is characterized by a rich fauna of Cladocera, which includes 17 Daphnia O.F. Müller, 1785 species be- longing to the subgenera Daphnia s.s. and Ctenodaphnia, plus several subspecies or hybrid taxa of dubious taxo- nomical value (Ruffo and Stoch, 2005; Marrone et al., 2007). keywords: allochthonous; american; analyses; areas; available; biol; biological; bodies; branchiopoda; canada; characterization; cia; cladocera; collected; complex; crease; crustacea; d. pulex; daphnia; daphnia pulex; data; distribution; epc; epx; et al; european; evolutionary; fadda; fauna; flores; fragment; genus; high; invasions; italian; italy; lake; lineage; margaritora; marková; marková et; marrone; mergeay; molecular; napc; napx; naselli; native; natural; nco; nd5; non; north; novel; occurrence; pcr; ponds; populations; present; pulex; pulicaria; sampled; sardinia; sequences; sicilian; single; sites; software; species; status; stoch; tab; taxa; temporary; trees; vecchioni; vergilino; water; work cache: aiol-9947.pdf plain text: aiol-9947.txt item: #141 of 143 id: aiol-9987 author: John Lyasenga, Theresia; Mwijage, Alistidia Paul; Shilla, Dativa Joseph; Marco Mahugija, John Andrew; Gaspare, Lydia; Shilla, Daniel Abel; Laurent Mfilinge, Prosper title: Diet and isotopic metrics of predatory and prey fish in two estuaries with different degrees of anthropogenic disturbances: the case study of Wami and Pangani rivers in Tanzania date: 2021-12-21 words: 11950 flesch: 57 summary: This paper aims at getting more insight into the above- mentioned perspectives, by comparing the diet and other trophic dynamics of fish species at the different degrees of anthropogenic disturbances present in Wami and Pan- gani estuaries. Fish species were caught by using monofil- ament gill nets of multiple mesh sizes and seine net with the dimensions of 15 m length, 1.5 m width and mesh size 0.5 mm. keywords: 2011; activities; africanus; analysis; anthropogenic; aquatic; area; argenteus; arius; basin; bayesian; biol; breadth; buchanani; cia; coastal; coioides; communities; community; comparable; complexity; composition; consumers; content; data; diet; dietary; differences; different; distance; disturbances; diversity; dynamics; ecol; ecological; ecology; ecosystems; environmental; epinephelus; estuaries; estuarine; estuarine fish; estuary; et al; extent; feeding; figure; findings; fish; fish species; fish trophic; fisheries; fishes; flow; following; food; high; higher; index; isotope; isotopic; items; juvenile; large; layman; length; level; low; lower; lyasenga; main; marine; mean; methods; metrics; mwijage; nco; niche; nitrogen; nnd; number; nutrients; overlap; pair; pangani; pangani estuary; percentage; permanova; pomadasys; predatory; predatory fish; prey; primary; range; ratios; redundancy; resources; results; river; salaam; sample; seab; seac; sihama; sillago; similar; similarity; size; smaller; species; stable; standard; stomach; structure; study; t.j; tanzania; total; trophic; trophic niche; trophic redundancy; upstream; values; variations; versus; wami; wami estuary; water; web; webs; width; δ13c; δ15n cache: aiol-9987.pdf plain text: aiol-9987.txt item: #142 of 143 id: aiol-9995 author: Pasquini, Viviana; Giglioli, Ambra Angelica ; Pusceddu, Antonio; Addis, Pierantonio title: Biology, ecology and management perspectives of overexploited deposit-feeders sea cucumbers, with focus on Holothuria tubulosa (Gmelin, 1788) date: 2021-12-07 words: 9606 flesch: 63 summary: Contribution of sea cucumber Holothuria tubulosa on organic load reduction from fish farming operation. Sea cucumbers, marine invertebrates belonging to the Echinodermata Phylum, include more than 1500 species (Horton et al., 2018) and, mainly being deposit feeders, represent a good example of low trophic level organisms. keywords: ability; anderson; anderson et; apostichopus; aquaculture; aspidochirotida; atra; australostichopus; available; barrier; battaglene; benthic; biol; biology; body; bordbar; breeding; bull; carton; chemical; cia; coastal; conand; conservation; contents; cucumber holothuria; cucumbers; cycle; deposit; development; different; digestive; dolmatov; domínguez; dry; dynamics; echinodermata; echinoderms; ecol; ecological; ecology; ecosystem; eds; effects; et al; experimental; exploitation; exploited; fao; farming; feeders; feeding; field; fisheries; fishery; food; functioning; fuscus; global; gmelin; godino; gonzález; granda; great; growth; hamel; high; holothuria; holothuria tubulosa; holothuroidea; imta; information; integrated; islands; italy; japonicus; jeffs; juveniles; larval; level; lovatelli; low; management; mar; marine; matter; mediterranean; mediterranean sea; mercier; mollis; mortality; natural; nco; new; nutrient; ocean; organic; organisms; overexploitation; overexploited; pacific; paper; particles; pasquini; pentactula; period; population; potential; protocols; purcell; purcell et; rakaj; rearing; recruitment; reef; regeneration; reproduction; res; research; response; restocking; review; roberts; role; rome; scabra; scale; sci; sea; sea cucumbers; seagrass; sediment; sedimentary; settlement; size; slater; species; status; stocks; structure; studies; systems; target; technical; toral; trade; trophic; tubulosa; turkey; use; uthicke; value; wangüemert; weight; wild; world; yang; yuan; zamora; zhang cache: aiol-9995.pdf plain text: aiol-9995.txt item: #143 of 143 id: aiol-9997 author: Podda, Cinzia; Sabatini, Andrea; Palmas, Francesco; Pusceddu, Antonio title: Hard times for catadromous fish: the case of the European eel Anguilla anguilla (L. 1758) date: 2021-12-07 words: 16694 flesch: 69 summary: Some studies provided evidence that thyroid hor- mones are involved in glass eel migration (Edeline et al., 2004; 2005). Fluctuation of glass eel migration in the Mondego estuary (Portugal) in 1988 and 1989. keywords: aarestrup; abundance; acou; adult; american; amilhat; analysis; anguilla anguilla; anguillid; anthropogenic; approach; aquat; aquatic; arai; assessment; atlantic; baltazar; barriers; beaulaton; behavior; belpaire; bevacqua; biol; body; bonhommeau; briand; bull; béguer; carlsson; casselman; castonguay; catadromous; catadromous fish; century; challenges; changes; chemical; cia; ciccotti; climate; coastal; complex; conditions; connectivity; conservation; continental; cresci; cues; cycle; dams; data; decline; dekker; development; diadromous; different; direct; dispersal; distribution; downstream; drouineau; durif; dynamics; ecol; ecological; ecology; ecosystems; edeline; edeline et; eds; eel anguilla; eel migration; eel recruitment; eels; effects; elie; entire; environmental; escapement; estuaries; estuarine; estuary; et al; european; european eel; example; exploitation; factors; fao; feunteun; fish; fish biol; fish fish; fish migration; fish species; fisheries; fishery; fishes; fishing; flow; fragmentation; french; freshwater; future; glass; glass eels; global; growth; habitat; hanel; hard; history; hydropower; ices; important; inland; interest; iucn; j. fish; jellyman; juvenile; kettle; knowledge; known; laffaille; laffaille et; lagoon; lambert; large; larinier; larval; leo; life; likely; local; long; lucas; l’anguille; magnetic; main; management; mar; matondo; mccarthy; measures; mediterranean; methods; migrating; migration; migratory; miller; miller et; model; moriarty; mortality; movement; natural; nco; new; north; occupancy; oceanic; odors; oliveira; otolith; ovidio; ovidio et; pacific; passage; patterns; pedersen; phase; piper; piscic; podda et; pon; pon et; population; possible; presence; prigge; production; prog; prouzet; pêche; quality; range; rates; recent; recruitment; report; research; restocked; restocking; restoration; review; rigaud; righton; river; robinet; rochard; salinity; salmon; sampling; sargasso; sci; science; sea; seasonal; shelf; silver; silver eels; simon; size; soares; soc; sola; spatial; spawning; species; specific; stage; status; stocked; stocks; studies; study; success; support; survival; telemetry; temporal; term; tesch; threats; thyroid; tidal; times; tosi; tracking; trancart; transport; tropical; tsukamoto; tzeng; upstream; use; van; walker; waters; westerberg; westerberg et; wickström; wild; worldwide; years; yellow; yield cache: aiol-9997.pdf plain text: aiol-9997.txt