id	sid	tid	token	lemma	pos
ajlm-1122	1	1	abstract	abstract	ADJ
ajlm-1122	1	2	introduction	introduction	NOUN
ajlm-1122	1	3	methods	method	NOUN
ajlm-1122	1	4	results	result	VERB
ajlm-1122	1	5	discussion	discussion	NOUN
ajlm-1122	1	6	acknowledgements	acknowledgement	NOUN
ajlm-1122	1	7	references	reference	NOUN
ajlm-1122	1	8	about	about	ADP
ajlm-1122	1	9	the	the	DET
ajlm-1122	1	10	author(s	author(s	PROPN
ajlm-1122	1	11	)	)	PUNCT
ajlm-1122	1	12	sophia	sophia	PROPN
ajlm-1122	1	13	rossouw	rossouw	VERB
ajlm-1122	1	14	south	south	ADJ
ajlm-1122	1	15	african	african	PROPN
ajlm-1122	1	16	medical	medical	PROPN
ajlm-1122	1	17	research	research	PROPN
ajlm-1122	1	18	council	council	PROPN
ajlm-1122	1	19	bioinformatics	bioinformatics	NOUN
ajlm-1122	1	20	unit	unit	NOUN
ajlm-1122	1	21	,	,	PUNCT
ajlm-1122	1	22	south	south	ADJ
ajlm-1122	1	23	african	african	ADJ
ajlm-1122	1	24	national	national	PROPN
ajlm-1122	1	25	bioinformatics	bioinformatics	PROPN
ajlm-1122	1	26	institute	institute	PROPN
ajlm-1122	1	27	,	,	PUNCT
ajlm-1122	1	28	university	university	NOUN
ajlm-1122	1	29	of	of	ADP
ajlm-1122	1	30	the	the	DET
ajlm-1122	1	31	western	western	ADJ
ajlm-1122	1	32	cape	cape	NOUN
ajlm-1122	1	33	,	,	PUNCT
ajlm-1122	1	34	cape	cape	NOUN
ajlm-1122	1	35	town	town	NOUN
ajlm-1122	1	36	,	,	PUNCT
ajlm-1122	1	37	south	south	PROPN
ajlm-1122	1	38	africa	africa	PROPN
ajlm-1122	1	39	hocine	hocine	PROPN
ajlm-1122	1	40	bendou	bendou	VERB
ajlm-1122	1	41	south	south	ADJ
ajlm-1122	1	42	african	african	PROPN
ajlm-1122	1	43	medical	medical	PROPN
ajlm-1122	1	44	research	research	PROPN
ajlm-1122	1	45	council	council	PROPN
ajlm-1122	1	46	bioinformatics	bioinformatics	NOUN
ajlm-1122	1	47	unit	unit	NOUN
ajlm-1122	1	48	,	,	PUNCT
ajlm-1122	1	49	south	south	ADJ
ajlm-1122	1	50	african	african	ADJ
ajlm-1122	1	51	national	national	PROPN
ajlm-1122	1	52	bioinformatics	bioinformatics	PROPN
ajlm-1122	1	53	institute	institute	PROPN
ajlm-1122	1	54	,	,	PUNCT
ajlm-1122	1	55	university	university	NOUN
ajlm-1122	1	56	of	of	ADP
ajlm-1122	1	57	the	the	DET
ajlm-1122	1	58	western	western	ADJ
ajlm-1122	1	59	cape	cape	NOUN
ajlm-1122	1	60	,	,	PUNCT
ajlm-1122	1	61	cape	cape	NOUN
ajlm-1122	1	62	town	town	NOUN
ajlm-1122	1	63	,	,	PUNCT
ajlm-1122	1	64	south	south	PROPN
ajlm-1122	1	65	africa	africa	PROPN
ajlm-1122	1	66	liam	liam	PROPN
ajlm-1122	1	67	bell	bell	PROPN
ajlm-1122	1	68	centre	centre	PROPN
ajlm-1122	1	69	for	for	ADP
ajlm-1122	1	70	proteomic	proteomic	ADJ
ajlm-1122	1	71	and	and	CCONJ
ajlm-1122	1	72	genomic	genomic	ADJ
ajlm-1122	1	73	research	research	NOUN
ajlm-1122	1	74	,	,	PUNCT
ajlm-1122	1	75	observatory	observatory	ADJ
ajlm-1122	1	76	,	,	PUNCT
ajlm-1122	1	77	cape	cape	NOUN
ajlm-1122	1	78	town	town	NOUN
ajlm-1122	1	79	,	,	PUNCT
ajlm-1122	1	80	south	south	PROPN
ajlm-1122	1	81	africa	africa	PROPN
ajlm-1122	1	82	jonathan	jonathan	PROPN
ajlm-1122	1	83	rigby	rigby	PROPN
ajlm-1122	1	84	department	department	PROPN
ajlm-1122	1	85	of	of	ADP
ajlm-1122	1	86	anatomical	anatomical	ADJ
ajlm-1122	1	87	pathology	pathology	NOUN
ajlm-1122	1	88	,	,	PUNCT
ajlm-1122	1	89	national	national	PROPN
ajlm-1122	1	90	health	health	PROPN
ajlm-1122	1	91	laboratory	laboratory	PROPN
ajlm-1122	1	92	service	service	PROPN
ajlm-1122	1	93	,	,	PUNCT
ajlm-1122	1	94	tygerberg	tygerberg	PROPN
ajlm-1122	1	95	hospital	hospital	PROPN
ajlm-1122	1	96	,	,	PUNCT
ajlm-1122	1	97	stellenbosch	stellenbosch	PROPN
ajlm-1122	1	98	university	university	PROPN
ajlm-1122	1	99	,	,	PUNCT
ajlm-1122	1	100	cape	cape	NOUN
ajlm-1122	1	101	town	town	NOUN
ajlm-1122	1	102	,	,	PUNCT
ajlm-1122	1	103	south	south	PROPN
ajlm-1122	1	104	africa	africa	PROPN
ajlm-1122	1	105	alan	alan	PROPN
ajlm-1122	1	106	christoffels	christoffels	PROPN
ajlm-1122	1	107	south	south	PROPN
ajlm-1122	1	108	african	african	PROPN
ajlm-1122	1	109	medical	medical	PROPN
ajlm-1122	1	110	research	research	PROPN
ajlm-1122	1	111	council	council	PROPN
ajlm-1122	1	112	bioinformatics	bioinformatics	NOUN
ajlm-1122	1	113	unit	unit	NOUN
ajlm-1122	1	114	,	,	PUNCT
ajlm-1122	1	115	south	south	ADJ
ajlm-1122	1	116	african	african	ADJ
ajlm-1122	1	117	national	national	PROPN
ajlm-1122	1	118	bioinformatics	bioinformatics	PROPN
ajlm-1122	1	119	institute	institute	PROPN
ajlm-1122	1	120	,	,	PUNCT
ajlm-1122	1	121	university	university	NOUN
ajlm-1122	1	122	of	of	ADP
ajlm-1122	1	123	the	the	DET
ajlm-1122	1	124	western	western	ADJ
ajlm-1122	1	125	cape	cape	NOUN
ajlm-1122	1	126	,	,	PUNCT
ajlm-1122	1	127	cape	cape	NOUN
ajlm-1122	1	128	town	town	NOUN
ajlm-1122	1	129	,	,	PUNCT
ajlm-1122	1	130	south	south	PROPN
ajlm-1122	1	131	africa	africa	PROPN
ajlm-1122	1	132	citation	citation	PROPN
ajlm-1122	1	133	rossouw	rossouw	NOUN
ajlm-1122	1	134	s	s	PART
ajlm-1122	1	135	,	,	PUNCT
ajlm-1122	1	136	bendou	bendou	NOUN
ajlm-1122	1	137	h	h	NOUN
ajlm-1122	1	138	,	,	PUNCT
ajlm-1122	1	139	bell	bell	PROPN
ajlm-1122	1	140	l	l	PROPN
ajlm-1122	1	141	,	,	PUNCT
ajlm-1122	1	142	rigby	rigby	PROPN
ajlm-1122	1	143	j	j	PROPN
ajlm-1122	1	144	,	,	PUNCT
ajlm-1122	1	145	christoffels	christoffels	PROPN
ajlm-1122	1	146	a.	a.	NOUN
ajlm-1122	1	147	effect	effect	NOUN
ajlm-1122	1	148	of	of	ADP
ajlm-1122	1	149	polyethylene	polyethylene	NOUN
ajlm-1122	1	150	glycol	glycol	NOUN
ajlm-1122	1	151	20	20	NUM
ajlm-1122	1	152	000	000	NUM
ajlm-1122	1	153	on	on	ADP
ajlm-1122	1	154	protein	protein	NOUN
ajlm-1122	1	155	extraction	extraction	NOUN
ajlm-1122	1	156	efficiency	efficiency	NOUN
ajlm-1122	1	157	of	of	ADP
ajlm-1122	1	158	formalin	formalin	NOUN
ajlm-1122	1	159	-	-	PUNCT
ajlm-1122	1	160	fixed	fix	VERB
ajlm-1122	1	161	paraffin	paraffin	NOUN
ajlm-1122	1	162	-	-	PUNCT
ajlm-1122	1	163	embedded	embed	VERB
ajlm-1122	1	164	tissues	tissue	NOUN
ajlm-1122	1	165	in	in	ADP
ajlm-1122	1	166	south	south	PROPN
ajlm-1122	1	167	africa	africa	PROPN
ajlm-1122	1	168	.	.	PUNCT
ajlm-1122	2	1	afr	afr	PROPN
ajlm-1122	2	2	j	j	PROPN
ajlm-1122	2	3	lab	lab	PROPN
ajlm-1122	2	4	med	med	PROPN
ajlm-1122	2	5	.	.	PUNCT
ajlm-1122	3	1	2021;10(1	2021;10(1	NUM
ajlm-1122	3	2	)	)	PUNCT
ajlm-1122	3	3	,	,	PUNCT
ajlm-1122	3	4	a1122	a1122	PROPN
ajlm-1122	3	5	.	.	PUNCT
ajlm-1122	4	1	https://doi.org/10.4102/ajlm.v10i1.1122	https://doi.org/10.4102/ajlm.v10i1.1122	X
ajlm-1122	4	2	note	note	VERB
ajlm-1122	4	3	:	:	PUNCT
ajlm-1122	4	4	additional	additional	ADJ
ajlm-1122	4	5	supporting	support	VERB
ajlm-1122	4	6	information	information	NOUN
ajlm-1122	4	7	may	may	AUX
ajlm-1122	4	8	be	be	AUX
ajlm-1122	4	9	found	find	VERB
ajlm-1122	4	10	in	in	ADP
ajlm-1122	4	11	the	the	DET
ajlm-1122	4	12	online	online	ADJ
ajlm-1122	4	13	version	version	NOUN
ajlm-1122	4	14	of	of	ADP
ajlm-1122	4	15	this	this	DET
ajlm-1122	4	16	article	article	NOUN
ajlm-1122	4	17	as	as	ADP
ajlm-1122	4	18	supplementary	supplementary	ADJ
ajlm-1122	4	19	documents	document	NOUN
ajlm-1122	4	20	s1	s1	NOUN
ajlm-1122	4	21	,	,	PUNCT
ajlm-1122	4	22	s2	s2	NOUN
ajlm-1122	4	23	,	,	PUNCT
ajlm-1122	4	24	tables	table	NOUN
ajlm-1122	4	25	s1	s1	NOUN
ajlm-1122	4	26	and	and	CCONJ
ajlm-1122	4	27	s2	s2	NOUN
ajlm-1122	4	28	and	and	CCONJ
ajlm-1122	4	29	figures	figure	VERB
ajlm-1122	4	30	s1	s1	NOUN
ajlm-1122	4	31	and	and	CCONJ
ajlm-1122	4	32	s2	s2	PROPN
ajlm-1122	4	33	.	.	PUNCT
ajlm-1122	5	1	original	original	ADJ
ajlm-1122	5	2	research	research	NOUN
ajlm-1122	5	3	effect	effect	NOUN
ajlm-1122	5	4	of	of	ADP
ajlm-1122	5	5	polyethylene	polyethylene	NOUN
ajlm-1122	5	6	glycol	glycol	NOUN
ajlm-1122	5	7	20	20	NUM
ajlm-1122	5	8	000	000	NUM
ajlm-1122	5	9	on	on	ADP
ajlm-1122	5	10	protein	protein	NOUN
ajlm-1122	5	11	extraction	extraction	NOUN
ajlm-1122	5	12	efficiency	efficiency	NOUN
ajlm-1122	5	13	of	of	ADP
ajlm-1122	5	14	formalin	formalin	NOUN
ajlm-1122	5	15	-	-	PUNCT
ajlm-1122	5	16	fixed	fix	VERB
ajlm-1122	5	17	paraffin	paraffin	NOUN
ajlm-1122	5	18	-	-	PUNCT
ajlm-1122	5	19	embedded	embed	VERB
ajlm-1122	5	20	tissues	tissue	NOUN
ajlm-1122	5	21	in	in	ADP
ajlm-1122	5	22	south	south	PROPN
ajlm-1122	5	23	africa	africa	PROPN
ajlm-1122	5	24	sophia	sophia	PROPN
ajlm-1122	5	25	rossouw	rossouw	PROPN
ajlm-1122	5	26	,	,	PUNCT
ajlm-1122	5	27	hocine	hocine	NOUN
ajlm-1122	5	28	bendou	bendou	NOUN
ajlm-1122	5	29	,	,	PUNCT
ajlm-1122	5	30	liam	liam	PROPN
ajlm-1122	5	31	bell	bell	PROPN
ajlm-1122	5	32	,	,	PUNCT
ajlm-1122	5	33	jonathan	jonathan	PROPN
ajlm-1122	5	34	rigby	rigby	PROPN
ajlm-1122	5	35	,	,	PUNCT
ajlm-1122	5	36	alan	alan	PROPN
ajlm-1122	5	37	christoffels	christoffels	PROPN
ajlm-1122	5	38	received	receive	VERB
ajlm-1122	5	39	:	:	PUNCT
ajlm-1122	5	40	25	25	NUM
ajlm-1122	5	41	nov	nov	PROPN
ajlm-1122	5	42	.	.	PROPN
ajlm-1122	5	43	2019	2019	NUM
ajlm-1122	5	44	;	;	PUNCT
ajlm-1122	5	45	accepted	accept	VERB
ajlm-1122	5	46	:	:	PUNCT
ajlm-1122	5	47	08	08	NUM
ajlm-1122	5	48	sept	sept	PROPN
ajlm-1122	5	49	.	.	PROPN
ajlm-1122	5	50	2021	2021	NUM
ajlm-1122	5	51	;	;	PUNCT
ajlm-1122	5	52	published	publish	VERB
ajlm-1122	5	53	:	:	PUNCT
ajlm-1122	5	54	17	17	NUM
ajlm-1122	5	55	dec	dec	PROPN
ajlm-1122	5	56	.	.	PROPN
ajlm-1122	6	1	2021	2021	NUM
ajlm-1122	6	2	copyright	copyright	NOUN
ajlm-1122	6	3	:	:	PUNCT
ajlm-1122	6	4	©	©	PROPN
ajlm-1122	6	5	2021	2021	NUM
ajlm-1122	6	6	.	.	PUNCT
ajlm-1122	7	1	the	the	DET
ajlm-1122	7	2	author(s	author(s	PROPN
ajlm-1122	7	3	)	)	PUNCT
ajlm-1122	7	4	.	.	PUNCT
ajlm-1122	8	1	licensee	licensee	NOUN
ajlm-1122	8	2	:	:	PUNCT
ajlm-1122	8	3	aosis	aosis	NOUN
ajlm-1122	8	4	.	.	PUNCT
ajlm-1122	9	1	this	this	PRON
ajlm-1122	9	2	is	be	AUX
ajlm-1122	9	3	an	an	DET
ajlm-1122	9	4	open	open	ADJ
ajlm-1122	9	5	access	access	NOUN
ajlm-1122	9	6	article	article	NOUN
ajlm-1122	9	7	distributed	distribute	VERB
ajlm-1122	9	8	under	under	ADP
ajlm-1122	9	9	the	the	DET
ajlm-1122	9	10	terms	term	NOUN
ajlm-1122	9	11	of	of	ADP
ajlm-1122	9	12	the	the	DET
ajlm-1122	9	13	creative	creative	ADJ
ajlm-1122	9	14	commons	common	NOUN
ajlm-1122	9	15	attribution	attribution	NOUN
ajlm-1122	9	16	license	license	NOUN
ajlm-1122	9	17	,	,	PUNCT
ajlm-1122	9	18	which	which	PRON
ajlm-1122	9	19	permits	permit	VERB
ajlm-1122	9	20	unrestricted	unrestricted	ADJ
ajlm-1122	9	21	use	use	NOUN
ajlm-1122	9	22	,	,	PUNCT
ajlm-1122	9	23	distribution	distribution	NOUN
ajlm-1122	9	24	,	,	PUNCT
ajlm-1122	9	25	and	and	CCONJ
ajlm-1122	9	26	reproduction	reproduction	NOUN
ajlm-1122	9	27	in	in	ADP
ajlm-1122	9	28	any	any	DET
ajlm-1122	9	29	medium	medium	NOUN
ajlm-1122	9	30	,	,	PUNCT
ajlm-1122	9	31	provided	provide	VERB
ajlm-1122	9	32	the	the	DET
ajlm-1122	9	33	original	original	ADJ
ajlm-1122	9	34	work	work	NOUN
ajlm-1122	9	35	is	be	AUX
ajlm-1122	9	36	properly	properly	ADV
ajlm-1122	9	37	cited	cite	VERB
ajlm-1122	9	38	.	.	PUNCT
ajlm-1122	10	1	abstract	abstract	ADJ
ajlm-1122	10	2	background	background	NOUN
ajlm-1122	10	3	:	:	PUNCT
ajlm-1122	10	4	optimal	optimal	ADJ
ajlm-1122	10	5	protocols	protocol	NOUN
ajlm-1122	10	6	for	for	ADP
ajlm-1122	10	7	efficient	efficient	ADJ
ajlm-1122	10	8	and	and	CCONJ
ajlm-1122	10	9	reproducible	reproducible	VERB
ajlm-1122	10	10	protein	protein	NOUN
ajlm-1122	10	11	extraction	extraction	NOUN
ajlm-1122	10	12	from	from	ADP
ajlm-1122	10	13	formalin	formalin	NOUN
ajlm-1122	10	14	-	-	PUNCT
ajlm-1122	10	15	fixed	fix	VERB
ajlm-1122	10	16	paraffin	paraffin	NOUN
ajlm-1122	10	17	-	-	PUNCT
ajlm-1122	10	18	embedded	embed	VERB
ajlm-1122	10	19	(	(	PUNCT
ajlm-1122	10	20	ffpe	ffpe	NOUN
ajlm-1122	10	21	)	)	PUNCT
ajlm-1122	10	22	tissues	tissue	NOUN
ajlm-1122	10	23	are	be	AUX
ajlm-1122	10	24	not	not	PART
ajlm-1122	10	25	yet	yet	ADV
ajlm-1122	10	26	standardised	standardised	ADJ
ajlm-1122	10	27	and	and	CCONJ
ajlm-1122	10	28	new	new	ADJ
ajlm-1122	10	29	techniques	technique	NOUN
ajlm-1122	10	30	are	be	AUX
ajlm-1122	10	31	continually	continually	ADV
ajlm-1122	10	32	developed	develop	VERB
ajlm-1122	10	33	and	and	CCONJ
ajlm-1122	10	34	improved	improve	VERB
ajlm-1122	10	35	.	.	PUNCT
ajlm-1122	11	1	the	the	DET
ajlm-1122	11	2	effect	effect	NOUN
ajlm-1122	11	3	of	of	ADP
ajlm-1122	11	4	polyethylene	polyethylene	NOUN
ajlm-1122	11	5	glycol	glycol	NOUN
ajlm-1122	11	6	(	(	PUNCT
ajlm-1122	11	7	peg	peg	NOUN
ajlm-1122	11	8	)	)	PUNCT
ajlm-1122	11	9	20	20	NUM
ajlm-1122	11	10	000	000	NUM
ajlm-1122	11	11	on	on	ADP
ajlm-1122	11	12	protein	protein	NOUN
ajlm-1122	11	13	extraction	extraction	NOUN
ajlm-1122	11	14	efficiency	efficiency	NOUN
ajlm-1122	11	15	has	have	AUX
ajlm-1122	11	16	not	not	PART
ajlm-1122	11	17	been	be	AUX
ajlm-1122	11	18	evaluated	evaluate	VERB
ajlm-1122	11	19	using	use	VERB
ajlm-1122	11	20	human	human	ADJ
ajlm-1122	11	21	ffpe	ffpe	NOUN
ajlm-1122	11	22	colorectal	colorectal	ADJ
ajlm-1122	11	23	cancer	cancer	NOUN
ajlm-1122	11	24	tissues	tissue	NOUN
ajlm-1122	11	25	and	and	CCONJ
ajlm-1122	11	26	there	there	PRON
ajlm-1122	11	27	is	be	VERB
ajlm-1122	11	28	no	no	DET
ajlm-1122	11	29	consensus	consensus	NOUN
ajlm-1122	11	30	on	on	ADP
ajlm-1122	11	31	the	the	DET
ajlm-1122	11	32	protein	protein	NOUN
ajlm-1122	11	33	extraction	extraction	NOUN
ajlm-1122	11	34	solution	solution	NOUN
ajlm-1122	11	35	required	require	VERB
ajlm-1122	11	36	for	for	ADP
ajlm-1122	11	37	efficient	efficient	ADJ
ajlm-1122	11	38	,	,	PUNCT
ajlm-1122	11	39	reproducible	reproducible	VERB
ajlm-1122	11	40	extraction	extraction	NOUN
ajlm-1122	11	41	.	.	PUNCT
ajlm-1122	12	1	objective	objective	NOUN
ajlm-1122	12	2	:	:	PUNCT
ajlm-1122	12	3	the	the	DET
ajlm-1122	12	4	impact	impact	NOUN
ajlm-1122	12	5	of	of	ADP
ajlm-1122	12	6	peg	peg	NOUN
ajlm-1122	12	7	20	20	NUM
ajlm-1122	12	8	000	000	NUM
ajlm-1122	12	9	on	on	ADP
ajlm-1122	12	10	protein	protein	NOUN
ajlm-1122	12	11	extraction	extraction	NOUN
ajlm-1122	12	12	efficiency	efficiency	NOUN
ajlm-1122	12	13	,	,	PUNCT
ajlm-1122	12	14	reproducibility	reproducibility	NOUN
ajlm-1122	12	15	and	and	CCONJ
ajlm-1122	12	16	protein	protein	NOUN
ajlm-1122	12	17	selection	selection	NOUN
ajlm-1122	12	18	bias	bias	NOUN
ajlm-1122	12	19	was	be	AUX
ajlm-1122	12	20	evaluated	evaluate	VERB
ajlm-1122	12	21	using	use	VERB
ajlm-1122	12	22	ffpe	ffpe	NOUN
ajlm-1122	12	23	colonic	colonic	ADJ
ajlm-1122	12	24	tissue	tissue	NOUN
ajlm-1122	12	25	via	via	ADP
ajlm-1122	12	26	liquid	liquid	ADJ
ajlm-1122	12	27	chromatography	chromatography	NOUN
ajlm-1122	12	28	tandem	tandem	PROPN
ajlm-1122	12	29	mass	mass	ADJ
ajlm-1122	12	30	spectrometry	spectrometry	NOUN
ajlm-1122	12	31	analysis	analysis	NOUN
ajlm-1122	12	32	.	.	PUNCT
ajlm-1122	13	1	methods	method	NOUN
ajlm-1122	13	2	:	:	PUNCT
ajlm-1122	13	3	this	this	DET
ajlm-1122	13	4	study	study	NOUN
ajlm-1122	13	5	was	be	AUX
ajlm-1122	13	6	conducted	conduct	VERB
ajlm-1122	13	7	from	from	ADP
ajlm-1122	13	8	august	august	PROPN
ajlm-1122	13	9	2017	2017	NUM
ajlm-1122	13	10	to	to	ADP
ajlm-1122	13	11	july	july	PROPN
ajlm-1122	13	12	2019	2019	NUM
ajlm-1122	13	13	using	use	VERB
ajlm-1122	13	14	human	human	ADJ
ajlm-1122	13	15	ffpe	ffpe	NOUN
ajlm-1122	13	16	colorectal	colorectal	ADJ
ajlm-1122	13	17	carcinoma	carcinoma	NOUN
ajlm-1122	13	18	tissues	tissue	NOUN
ajlm-1122	13	19	from	from	ADP
ajlm-1122	13	20	the	the	DET
ajlm-1122	13	21	anatomical	anatomical	ADJ
ajlm-1122	13	22	pathology	pathology	NOUN
ajlm-1122	13	23	department	department	NOUN
ajlm-1122	13	24	at	at	ADP
ajlm-1122	13	25	tygerberg	tygerberg	PROPN
ajlm-1122	13	26	hospital	hospital	PROPN
ajlm-1122	13	27	in	in	ADP
ajlm-1122	13	28	south	south	PROPN
ajlm-1122	13	29	africa	africa	PROPN
ajlm-1122	13	30	.	.	PUNCT
ajlm-1122	14	1	samples	sample	NOUN
ajlm-1122	14	2	were	be	AUX
ajlm-1122	14	3	analysed	analyse	VERB
ajlm-1122	14	4	via	via	ADP
ajlm-1122	14	5	label	label	NOUN
ajlm-1122	14	6	-	-	PUNCT
ajlm-1122	14	7	free	free	ADJ
ajlm-1122	14	8	liquid	liquid	ADJ
ajlm-1122	14	9	chromatography	chromatography	NOUN
ajlm-1122	14	10	tandem	tandem	PROPN
ajlm-1122	14	11	mass	mass	PROPN
ajlm-1122	14	12	spectrometry	spectrometry	NOUN
ajlm-1122	14	13	to	to	PART
ajlm-1122	14	14	determine	determine	VERB
ajlm-1122	14	15	the	the	DET
ajlm-1122	14	16	impact	impact	NOUN
ajlm-1122	14	17	of	of	ADP
ajlm-1122	14	18	using	use	VERB
ajlm-1122	14	19	peg	peg	NOUN
ajlm-1122	14	20	20	20	NUM
ajlm-1122	14	21	000	000	NUM
ajlm-1122	14	22	in	in	ADP
ajlm-1122	14	23	the	the	DET
ajlm-1122	14	24	protein	protein	NOUN
ajlm-1122	14	25	extraction	extraction	NOUN
ajlm-1122	14	26	solution	solution	NOUN
ajlm-1122	14	27	.	.	PUNCT
ajlm-1122	15	1	data	datum	NOUN
ajlm-1122	15	2	were	be	AUX
ajlm-1122	15	3	assessed	assess	VERB
ajlm-1122	15	4	regarding	regard	VERB
ajlm-1122	15	5	peptide	peptide	NOUN
ajlm-1122	15	6	and	and	CCONJ
ajlm-1122	15	7	protein	protein	NOUN
ajlm-1122	15	8	identifications	identification	NOUN
ajlm-1122	15	9	,	,	PUNCT
ajlm-1122	15	10	method	method	NOUN
ajlm-1122	15	11	efficiency	efficiency	NOUN
ajlm-1122	15	12	,	,	PUNCT
ajlm-1122	15	13	reproducibility	reproducibility	NOUN
ajlm-1122	15	14	,	,	PUNCT
ajlm-1122	15	15	protein	protein	NOUN
ajlm-1122	15	16	characteristics	characteristic	NOUN
ajlm-1122	15	17	and	and	CCONJ
ajlm-1122	15	18	organisation	organisation	NOUN
ajlm-1122	15	19	relating	relate	VERB
ajlm-1122	15	20	to	to	ADP
ajlm-1122	15	21	gene	gene	NOUN
ajlm-1122	15	22	ontology	ontology	NOUN
ajlm-1122	15	23	categories	category	NOUN
ajlm-1122	15	24	.	.	PUNCT
ajlm-1122	16	1	results	result	NOUN
ajlm-1122	16	2	:	:	PUNCT
ajlm-1122	16	3	polyethylene	polyethylene	NOUN
ajlm-1122	16	4	glycol	glycol	NOUN
ajlm-1122	16	5	20	20	NUM
ajlm-1122	16	6	000	000	NUM
ajlm-1122	16	7	exclusion	exclusion	NOUN
ajlm-1122	16	8	increased	increase	VERB
ajlm-1122	16	9	peptides	peptide	NOUN
ajlm-1122	16	10	and	and	CCONJ
ajlm-1122	16	11	proteins	protein	NOUN
ajlm-1122	16	12	identifications	identification	NOUN
ajlm-1122	16	13	and	and	CCONJ
ajlm-1122	16	14	the	the	DET
ajlm-1122	16	15	method	method	NOUN
ajlm-1122	16	16	was	be	AUX
ajlm-1122	16	17	more	more	ADV
ajlm-1122	16	18	reproducible	reproducible	ADJ
ajlm-1122	16	19	compared	compare	VERB
ajlm-1122	16	20	to	to	ADP
ajlm-1122	16	21	the	the	DET
ajlm-1122	16	22	samples	sample	NOUN
ajlm-1122	16	23	processed	process	VERB
ajlm-1122	16	24	with	with	ADP
ajlm-1122	16	25	peg	peg	NOUN
ajlm-1122	16	26	20	20	NUM
ajlm-1122	16	27	000	000	NUM
ajlm-1122	16	28	.	.	PUNCT
ajlm-1122	17	1	however	however	ADV
ajlm-1122	17	2	,	,	PUNCT
ajlm-1122	17	3	no	no	DET
ajlm-1122	17	4	differences	difference	NOUN
ajlm-1122	17	5	were	be	AUX
ajlm-1122	17	6	observed	observe	VERB
ajlm-1122	17	7	with	with	ADP
ajlm-1122	17	8	regard	regard	NOUN
ajlm-1122	17	9	to	to	ADP
ajlm-1122	17	10	protein	protein	NOUN
ajlm-1122	17	11	selection	selection	NOUN
ajlm-1122	17	12	bias	bias	NOUN
ajlm-1122	17	13	.	.	PUNCT
ajlm-1122	18	1	we	we	PRON
ajlm-1122	18	2	found	find	VERB
ajlm-1122	18	3	that	that	SCONJ
ajlm-1122	18	4	higher	high	ADJ
ajlm-1122	18	5	protein	protein	NOUN
ajlm-1122	18	6	concentrations	concentration	NOUN
ajlm-1122	18	7	(	(	PUNCT
ajlm-1122	18	8	>	>	X
ajlm-1122	18	9	10	10	NUM
ajlm-1122	18	10	µg	µg	NOUN
ajlm-1122	18	11	)	)	PUNCT
ajlm-1122	18	12	compromised	compromise	VERB
ajlm-1122	18	13	the	the	DET
ajlm-1122	18	14	function	function	NOUN
ajlm-1122	18	15	of	of	ADP
ajlm-1122	18	16	peg	peg	NOUN
ajlm-1122	18	17	.	.	PUNCT
ajlm-1122	19	1	conclusion	conclusion	NOUN
ajlm-1122	19	2	:	:	PUNCT
ajlm-1122	19	3	this	this	DET
ajlm-1122	19	4	study	study	NOUN
ajlm-1122	19	5	indicates	indicate	VERB
ajlm-1122	19	6	that	that	SCONJ
ajlm-1122	19	7	protocols	protocol	NOUN
ajlm-1122	19	8	generating	generate	VERB
ajlm-1122	19	9	high	high	ADJ
ajlm-1122	19	10	protein	protein	NOUN
ajlm-1122	19	11	yields	yield	NOUN
ajlm-1122	19	12	from	from	ADP
ajlm-1122	19	13	human	human	ADJ
ajlm-1122	19	14	ffpe	ffpe	NOUN
ajlm-1122	19	15	tissues	tissue	NOUN
ajlm-1122	19	16	would	would	AUX
ajlm-1122	19	17	benefit	benefit	VERB
ajlm-1122	19	18	from	from	ADP
ajlm-1122	19	19	the	the	DET
ajlm-1122	19	20	exclusion	exclusion	NOUN
ajlm-1122	19	21	of	of	ADP
ajlm-1122	19	22	peg	peg	NOUN
ajlm-1122	19	23	20	20	NUM
ajlm-1122	19	24	000	000	NUM
ajlm-1122	19	25	in	in	ADP
ajlm-1122	19	26	the	the	DET
ajlm-1122	19	27	protein	protein	NOUN
ajlm-1122	19	28	extraction	extraction	NOUN
ajlm-1122	19	29	solution	solution	NOUN
ajlm-1122	19	30	.	.	PUNCT
ajlm-1122	20	1	keywords	keyword	NOUN
ajlm-1122	20	2	:	:	PUNCT
ajlm-1122	20	3	mass	mass	ADJ
ajlm-1122	20	4	spectrometry	spectrometry	NOUN
ajlm-1122	20	5	;	;	PUNCT
ajlm-1122	20	6	formalin	formalin	NOUN
ajlm-1122	20	7	-	-	PUNCT
ajlm-1122	20	8	fixed	fix	VERB
ajlm-1122	20	9	paraffin	paraffin	NOUN
ajlm-1122	20	10	-	-	PUNCT
ajlm-1122	20	11	embedded	embed	VERB
ajlm-1122	20	12	proteomics	proteomic	NOUN
ajlm-1122	20	13	;	;	PUNCT
ajlm-1122	20	14	archival	archival	NOUN
ajlm-1122	20	15	tissue	tissue	NOUN
ajlm-1122	20	16	;	;	PUNCT
ajlm-1122	20	17	protein	protein	NOUN
ajlm-1122	20	18	extraction	extraction	NOUN
ajlm-1122	20	19	;	;	PUNCT
ajlm-1122	20	20	polyethylene	polyethylene	NOUN
ajlm-1122	20	21	glycol	glycol	NOUN
ajlm-1122	20	22	20	20	NUM
ajlm-1122	20	23	000	000	NUM
ajlm-1122	20	24	;	;	PUNCT
ajlm-1122	20	25	sp3	sp3	NOUN
ajlm-1122	20	26	-	-	PUNCT
ajlm-1122	20	27	on	on	ADP
ajlm-1122	20	28	-	-	PUNCT
ajlm-1122	20	29	bead	bead	NOUN
ajlm-1122	20	30	-	-	PUNCT
ajlm-1122	20	31	digestion	digestion	NOUN
ajlm-1122	20	32	.	.	PUNCT
ajlm-1122	21	1	introduction	introduction	NOUN
ajlm-1122	21	2	archival	archival	NOUN
ajlm-1122	21	3	formalin	formalin	NOUN
ajlm-1122	21	4	-	-	PUNCT
ajlm-1122	21	5	fixed	fix	VERB
ajlm-1122	21	6	paraffin	paraffin	NOUN
ajlm-1122	21	7	-	-	PUNCT
ajlm-1122	21	8	embedded	embed	VERB
ajlm-1122	21	9	(	(	PUNCT
ajlm-1122	21	10	ffpe	ffpe	NOUN
ajlm-1122	21	11	)	)	PUNCT
ajlm-1122	21	12	tissue	tissue	NOUN
ajlm-1122	21	13	repositories	repository	NOUN
ajlm-1122	21	14	are	be	AUX
ajlm-1122	21	15	valuable	valuable	ADJ
ajlm-1122	21	16	resources	resource	NOUN
ajlm-1122	21	17	for	for	ADP
ajlm-1122	21	18	clinical	clinical	ADJ
ajlm-1122	21	19	proteomic	proteomic	ADJ
ajlm-1122	21	20	studies	study	NOUN
ajlm-1122	21	21	;	;	PUNCT
ajlm-1122	21	22	such	such	ADJ
ajlm-1122	21	23	repositories	repository	NOUN
ajlm-1122	21	24	may	may	AUX
ajlm-1122	21	25	include	include	VERB
ajlm-1122	21	26	retrospective	retrospective	ADJ
ajlm-1122	21	27	as	as	ADV
ajlm-1122	21	28	well	well	ADV
ajlm-1122	21	29	as	as	ADP
ajlm-1122	21	30	protein	protein	NOUN
ajlm-1122	21	31	biomarker	biomarker	NOUN
ajlm-1122	21	32	discovery	discovery	NOUN
ajlm-1122	21	33	and	and	CCONJ
ajlm-1122	21	34	validation	validation	NOUN
ajlm-1122	21	35	studies.1,2,3	studies.1,2,3	PUNCT
ajlm-1122	21	36	these	these	DET
ajlm-1122	21	37	repositories	repository	NOUN
ajlm-1122	21	38	are	be	AUX
ajlm-1122	21	39	often	often	ADV
ajlm-1122	21	40	composed	compose	VERB
ajlm-1122	21	41	of	of	ADP
ajlm-1122	21	42	a	a	DET
ajlm-1122	21	43	large	large	ADJ
ajlm-1122	21	44	variety	variety	NOUN
ajlm-1122	21	45	of	of	ADP
ajlm-1122	21	46	patient	patient	ADJ
ajlm-1122	21	47	biopsy	biopsy	NOUN
ajlm-1122	21	48	tissues	tissue	NOUN
ajlm-1122	21	49	,	,	PUNCT
ajlm-1122	21	50	which	which	PRON
ajlm-1122	21	51	are	be	AUX
ajlm-1122	21	52	accompanied	accompany	VERB
ajlm-1122	21	53	by	by	ADP
ajlm-1122	21	54	their	their	PRON
ajlm-1122	21	55	associated	associated	ADJ
ajlm-1122	21	56	clinical	clinical	ADJ
ajlm-1122	21	57	metadata	metadata	NOUN
ajlm-1122	21	58	,	,	PUNCT
ajlm-1122	21	59	in	in	ADP
ajlm-1122	21	60	the	the	DET
ajlm-1122	21	61	form	form	NOUN
ajlm-1122	21	62	of	of	ADP
ajlm-1122	21	63	patient	patient	ADJ
ajlm-1122	21	64	medical	medical	ADJ
ajlm-1122	21	65	records	record	NOUN
ajlm-1122	21	66	.	.	PUNCT
ajlm-1122	22	1	the	the	DET
ajlm-1122	22	2	wealth	wealth	NOUN
ajlm-1122	22	3	of	of	ADP
ajlm-1122	22	4	information	information	NOUN
ajlm-1122	22	5	stored	store	VERB
ajlm-1122	22	6	in	in	ADP
ajlm-1122	22	7	these	these	DET
ajlm-1122	22	8	archival	archival	NOUN
ajlm-1122	22	9	ffpe	ffpe	NOUN
ajlm-1122	22	10	tissue	tissue	NOUN
ajlm-1122	22	11	repositories	repository	NOUN
ajlm-1122	22	12	,	,	PUNCT
ajlm-1122	22	13	together	together	ADV
ajlm-1122	22	14	with	with	ADP
ajlm-1122	22	15	the	the	DET
ajlm-1122	22	16	easily	easily	ADV
ajlm-1122	22	17	accessible	accessible	ADJ
ajlm-1122	22	18	ffpe	ffpe	NOUN
ajlm-1122	22	19	samples	sample	NOUN
ajlm-1122	22	20	,	,	PUNCT
ajlm-1122	22	21	has	have	AUX
ajlm-1122	22	22	generated	generate	VERB
ajlm-1122	22	23	improved	improved	ADJ
ajlm-1122	22	24	methods	method	NOUN
ajlm-1122	22	25	for	for	ADP
ajlm-1122	22	26	ffpe	ffpe	ADJ
ajlm-1122	22	27	tissue	tissue	NOUN
ajlm-1122	22	28	analysis	analysis	NOUN
ajlm-1122	22	29	in	in	ADP
ajlm-1122	22	30	the	the	DET
ajlm-1122	22	31	context	context	NOUN
ajlm-1122	22	32	of	of	ADP
ajlm-1122	22	33	genomic	genomic	NOUN
ajlm-1122	22	34	,	,	PUNCT
ajlm-1122	22	35	proteomic	proteomic	ADJ
ajlm-1122	22	36	and	and	CCONJ
ajlm-1122	22	37	immunohistochemical	immunohistochemical	ADJ
ajlm-1122	22	38	studies.1,2,3	studies.1,2,3	X
ajlm-1122	22	39	the	the	DET
ajlm-1122	22	40	development	development	NOUN
ajlm-1122	22	41	and	and	CCONJ
ajlm-1122	22	42	standardisation	standardisation	NOUN
ajlm-1122	22	43	of	of	ADP
ajlm-1122	22	44	ffpe	ffpe	NOUN
ajlm-1122	22	45	sample	sample	NOUN
ajlm-1122	22	46	processing	processing	NOUN
ajlm-1122	22	47	for	for	ADP
ajlm-1122	22	48	mass	mass	ADJ
ajlm-1122	22	49	spectrometry	spectrometry	NOUN
ajlm-1122	22	50	(	(	PUNCT
ajlm-1122	22	51	ms)-based	ms)-base	VERB
ajlm-1122	22	52	analysis	analysis	NOUN
ajlm-1122	22	53	to	to	PART
ajlm-1122	22	54	determine	determine	VERB
ajlm-1122	22	55	changes	change	NOUN
ajlm-1122	22	56	(	(	PUNCT
ajlm-1122	22	57	or	or	CCONJ
ajlm-1122	22	58	similarities	similarity	NOUN
ajlm-1122	22	59	)	)	PUNCT
ajlm-1122	22	60	in	in	ADP
ajlm-1122	22	61	the	the	DET
ajlm-1122	22	62	proteome	proteome	ADJ
ajlm-1122	22	63	composition	composition	NOUN
ajlm-1122	22	64	of	of	ADP
ajlm-1122	22	65	tumour	tumour	NOUN
ajlm-1122	22	66	versus	versus	ADP
ajlm-1122	22	67	healthy	healthy	ADJ
ajlm-1122	22	68	tissues	tissue	NOUN
ajlm-1122	22	69	is	be	AUX
ajlm-1122	22	70	of	of	ADP
ajlm-1122	22	71	great	great	ADJ
ajlm-1122	22	72	interest	interest	NOUN
ajlm-1122	22	73	to	to	ADP
ajlm-1122	22	74	clinical	clinical	ADJ
ajlm-1122	22	75	and	and	CCONJ
ajlm-1122	22	76	translational	translational	ADJ
ajlm-1122	22	77	research.4,5	research.4,5	NOUN
ajlm-1122	22	78	part	part	NOUN
ajlm-1122	22	79	of	of	ADP
ajlm-1122	22	80	this	this	DET
ajlm-1122	22	81	process	process	NOUN
ajlm-1122	22	82	involves	involve	VERB
ajlm-1122	22	83	using	use	VERB
ajlm-1122	22	84	an	an	DET
ajlm-1122	22	85	optimal	optimal	ADJ
ajlm-1122	22	86	and	and	CCONJ
ajlm-1122	22	87	efficient	efficient	ADJ
ajlm-1122	22	88	protein	protein	NOUN
ajlm-1122	22	89	extraction	extraction	NOUN
ajlm-1122	22	90	buffer	buffer	NOUN
ajlm-1122	22	91	to	to	PART
ajlm-1122	22	92	generate	generate	VERB
ajlm-1122	22	93	reproducible	reproducible	ADJ
ajlm-1122	22	94	results	result	NOUN
ajlm-1122	22	95	.	.	PUNCT
ajlm-1122	23	1	studies	study	NOUN
ajlm-1122	23	2	have	have	AUX
ajlm-1122	23	3	found	find	VERB
ajlm-1122	23	4	that	that	SCONJ
ajlm-1122	23	5	experimental	experimental	ADJ
ajlm-1122	23	6	factors	factor	NOUN
ajlm-1122	23	7	,	,	PUNCT
ajlm-1122	23	8	such	such	ADJ
ajlm-1122	23	9	as	as	ADP
ajlm-1122	23	10	protein	protein	NOUN
ajlm-1122	23	11	extraction	extraction	NOUN
ajlm-1122	23	12	buffer	buffer	NOUN
ajlm-1122	23	13	,	,	PUNCT
ajlm-1122	23	14	ph	ph	ADJ
ajlm-1122	23	15	,	,	PUNCT
ajlm-1122	23	16	detergents	detergent	NOUN
ajlm-1122	23	17	,	,	PUNCT
ajlm-1122	23	18	denaturants	denaturant	NOUN
ajlm-1122	23	19	and	and	CCONJ
ajlm-1122	23	20	temperature	temperature	NOUN
ajlm-1122	23	21	,	,	PUNCT
ajlm-1122	23	22	play	play	VERB
ajlm-1122	23	23	important	important	ADJ
ajlm-1122	23	24	roles	role	NOUN
ajlm-1122	23	25	in	in	ADP
ajlm-1122	23	26	the	the	DET
ajlm-1122	23	27	final	final	ADJ
ajlm-1122	23	28	attainable	attainable	ADJ
ajlm-1122	23	29	protein	protein	NOUN
ajlm-1122	23	30	yield	yield	NOUN
ajlm-1122	23	31	from	from	ADP
ajlm-1122	23	32	ffpe	ffpe	NOUN
ajlm-1122	23	33	tissues.3,6	tissues.3,6	PROPN
ajlm-1122	23	34	other	other	ADJ
ajlm-1122	23	35	factors	factor	NOUN
ajlm-1122	23	36	to	to	PART
ajlm-1122	23	37	consider	consider	VERB
ajlm-1122	23	38	include	include	VERB
ajlm-1122	23	39	limited	limited	ADJ
ajlm-1122	23	40	availability	availability	NOUN
ajlm-1122	23	41	of	of	ADP
ajlm-1122	23	42	clinical	clinical	ADJ
ajlm-1122	23	43	specimens	specimen	NOUN
ajlm-1122	23	44	and	and	CCONJ
ajlm-1122	23	45	therefore	therefore	ADV
ajlm-1122	23	46	a	a	DET
ajlm-1122	23	47	limited	limited	ADJ
ajlm-1122	23	48	amount	amount	NOUN
ajlm-1122	23	49	of	of	ADP
ajlm-1122	23	50	starting	start	VERB
ajlm-1122	23	51	material	material	NOUN
ajlm-1122	23	52	(	(	PUNCT
ajlm-1122	23	53	tissue	tissue	NOUN
ajlm-1122	23	54	)	)	PUNCT
ajlm-1122	23	55	available	available	ADJ
ajlm-1122	23	56	for	for	ADP
ajlm-1122	23	57	optimising	optimise	VERB
ajlm-1122	23	58	a	a	DET
ajlm-1122	23	59	protein	protein	NOUN
ajlm-1122	23	60	extraction	extraction	NOUN
ajlm-1122	23	61	procedure	procedure	NOUN
ajlm-1122	23	62	.	.	PUNCT
ajlm-1122	24	1	this	this	DET
ajlm-1122	24	2	places	place	NOUN
ajlm-1122	24	3	limitations	limitation	NOUN
ajlm-1122	24	4	on	on	ADP
ajlm-1122	24	5	the	the	DET
ajlm-1122	24	6	choice	choice	NOUN
ajlm-1122	24	7	of	of	ADP
ajlm-1122	24	8	proteomics	proteomic	NOUN
ajlm-1122	24	9	workflows	workflow	NOUN
ajlm-1122	24	10	(	(	PUNCT
ajlm-1122	24	11	including	include	VERB
ajlm-1122	24	12	protein	protein	NOUN
ajlm-1122	24	13	extraction	extraction	NOUN
ajlm-1122	24	14	,	,	PUNCT
ajlm-1122	24	15	protein	protein	NOUN
ajlm-1122	24	16	sample	sample	NOUN
ajlm-1122	24	17	enrichment	enrichment	NOUN
ajlm-1122	24	18	,	,	PUNCT
ajlm-1122	24	19	fractionation	fractionation	NOUN
ajlm-1122	24	20	and	and	CCONJ
ajlm-1122	24	21	digestion	digestion	NOUN
ajlm-1122	24	22	)	)	PUNCT
ajlm-1122	24	23	that	that	PRON
ajlm-1122	24	24	can	can	AUX
ajlm-1122	24	25	be	be	AUX
ajlm-1122	24	26	used	use	VERB
ajlm-1122	24	27	to	to	PART
ajlm-1122	24	28	generate	generate	VERB
ajlm-1122	24	29	samples	sample	NOUN
ajlm-1122	24	30	of	of	ADP
ajlm-1122	24	31	suitable	suitable	ADJ
ajlm-1122	24	32	quality	quality	NOUN
ajlm-1122	24	33	for	for	ADP
ajlm-1122	24	34	high	high	ADJ
ajlm-1122	24	35	sensitivity	sensitivity	NOUN
ajlm-1122	24	36	liquid	liquid	ADJ
ajlm-1122	24	37	chromatography	chromatography	NOUN
ajlm-1122	24	38	(	(	PUNCT
ajlm-1122	24	39	lc	lc	PROPN
ajlm-1122	24	40	)	)	PUNCT
ajlm-1122	24	41	tandem	tandem	PROPN
ajlm-1122	24	42	ms	ms	PROPN
ajlm-1122	24	43	analysis.2,7	analysis.2,7	ADJ
ajlm-1122	24	44	additional	additional	ADJ
ajlm-1122	24	45	challenges	challenge	NOUN
ajlm-1122	24	46	faced	face	VERB
ajlm-1122	24	47	in	in	ADP
ajlm-1122	24	48	ffpe	ffpe	ADJ
ajlm-1122	24	49	proteomics	proteomic	NOUN
ajlm-1122	24	50	studies	study	NOUN
ajlm-1122	24	51	,	,	PUNCT
ajlm-1122	24	52	which	which	PRON
ajlm-1122	24	53	can	can	AUX
ajlm-1122	24	54	not	not	PART
ajlm-1122	24	55	be	be	AUX
ajlm-1122	24	56	remedied	remedied	ADJ
ajlm-1122	24	57	after	after	ADP
ajlm-1122	24	58	the	the	DET
ajlm-1122	24	59	fact	fact	NOUN
ajlm-1122	24	60	,	,	PUNCT
ajlm-1122	24	61	are	be	AUX
ajlm-1122	24	62	pre	pre	ADJ
ajlm-1122	24	63	-	-	ADJ
ajlm-1122	24	64	analytical	analytical	ADJ
ajlm-1122	24	65	factors	factor	NOUN
ajlm-1122	24	66	that	that	PRON
ajlm-1122	24	67	affect	affect	VERB
ajlm-1122	24	68	protein	protein	NOUN
ajlm-1122	24	69	extraction	extraction	NOUN
ajlm-1122	24	70	efficiency	efficiency	NOUN
ajlm-1122	24	71	and	and	CCONJ
ajlm-1122	24	72	often	often	ADV
ajlm-1122	24	73	produce	produce	VERB
ajlm-1122	24	74	variable	variable	ADJ
ajlm-1122	24	75	protein	protein	NOUN
ajlm-1122	24	76	yields	yield	NOUN
ajlm-1122	24	77	.	.	PUNCT
ajlm-1122	25	1	these	these	PRON
ajlm-1122	25	2	may	may	AUX
ajlm-1122	25	3	include	include	VERB
ajlm-1122	25	4	tissue	tissue	NOUN
ajlm-1122	25	5	ischemic	ischemic	ADJ
ajlm-1122	25	6	time	time	NOUN
ajlm-1122	25	7	,	,	PUNCT
ajlm-1122	25	8	the	the	DET
ajlm-1122	25	9	composition	composition	NOUN
ajlm-1122	25	10	of	of	ADP
ajlm-1122	25	11	the	the	DET
ajlm-1122	25	12	fixative	fixative	NOUN
ajlm-1122	25	13	,	,	PUNCT
ajlm-1122	25	14	fixation	fixation	NOUN
ajlm-1122	25	15	time	time	NOUN
ajlm-1122	25	16	(	(	PUNCT
ajlm-1122	25	17	duration	duration	NOUN
ajlm-1122	25	18	or	or	CCONJ
ajlm-1122	25	19	range	range	NOUN
ajlm-1122	25	20	of	of	ADP
ajlm-1122	25	21	formalin	formalin	NOUN
ajlm-1122	25	22	-	-	PUNCT
ajlm-1122	25	23	fixation	fixation	NOUN
ajlm-1122	25	24	times	time	NOUN
ajlm-1122	25	25	used	use	VERB
ajlm-1122	25	26	)	)	PUNCT
ajlm-1122	25	27	,	,	PUNCT
ajlm-1122	25	28	as	as	ADV
ajlm-1122	25	29	well	well	ADV
ajlm-1122	25	30	as	as	ADP
ajlm-1122	25	31	block	block	NOUN
ajlm-1122	25	32	age	age	NOUN
ajlm-1122	25	33	and	and	CCONJ
ajlm-1122	25	34	storage	storage	NOUN
ajlm-1122	25	35	conditions.2,4,8	conditions.2,4,8	NOUN
ajlm-1122	25	36	during	during	ADP
ajlm-1122	25	37	the	the	DET
ajlm-1122	25	38	protein	protein	NOUN
ajlm-1122	25	39	extraction	extraction	NOUN
ajlm-1122	25	40	process	process	NOUN
ajlm-1122	25	41	,	,	PUNCT
ajlm-1122	25	42	the	the	DET
ajlm-1122	25	43	effect	effect	NOUN
ajlm-1122	25	44	of	of	ADP
ajlm-1122	25	45	the	the	DET
ajlm-1122	25	46	formaldehyde	formaldehyde	NOUN
ajlm-1122	25	47	fixation	fixation	NOUN
ajlm-1122	25	48	chemistry	chemistry	NOUN
ajlm-1122	25	49	on	on	ADP
ajlm-1122	25	50	the	the	DET
ajlm-1122	25	51	tissues	tissue	NOUN
ajlm-1122	25	52	poses	pose	VERB
ajlm-1122	25	53	another	another	DET
ajlm-1122	25	54	challenge	challenge	NOUN
ajlm-1122	25	55	to	to	PART
ajlm-1122	25	56	overcome	overcome	VERB
ajlm-1122	25	57	.	.	PUNCT
ajlm-1122	26	1	due	due	ADP
ajlm-1122	26	2	to	to	ADP
ajlm-1122	26	3	extensive	extensive	ADJ
ajlm-1122	26	4	formaldehyde	formaldehyde	NOUN
ajlm-1122	26	5	cross	cross	NOUN
ajlm-1122	26	6	-	-	ADJ
ajlm-1122	26	7	linking	link	VERB
ajlm-1122	26	8	between	between	ADP
ajlm-1122	26	9	molecules	molecule	NOUN
ajlm-1122	26	10	,	,	PUNCT
ajlm-1122	26	11	accurate	accurate	ADJ
ajlm-1122	26	12	and	and	CCONJ
ajlm-1122	26	13	efficient	efficient	ADJ
ajlm-1122	26	14	protein	protein	NOUN
ajlm-1122	26	15	extraction	extraction	NOUN
ajlm-1122	26	16	from	from	ADP
ajlm-1122	26	17	ffpe	ffpe	ADJ
ajlm-1122	26	18	tissues	tissue	NOUN
ajlm-1122	26	19	is	be	AUX
ajlm-1122	26	20	difficult	difficult	ADJ
ajlm-1122	26	21	.	.	PUNCT
ajlm-1122	27	1	it	it	PRON
ajlm-1122	27	2	requires	require	VERB
ajlm-1122	27	3	specific	specific	ADJ
ajlm-1122	27	4	sample	sample	NOUN
ajlm-1122	27	5	processing	processing	NOUN
ajlm-1122	27	6	techniques	technique	NOUN
ajlm-1122	27	7	to	to	PART
ajlm-1122	27	8	allow	allow	VERB
ajlm-1122	27	9	for	for	ADP
ajlm-1122	27	10	complete	complete	ADJ
ajlm-1122	27	11	breakage	breakage	NOUN
ajlm-1122	27	12	of	of	ADP
ajlm-1122	27	13	cross	cross	ADJ
ajlm-1122	27	14	-	-	ADJ
ajlm-1122	27	15	linking	linking	ADJ
ajlm-1122	27	16	bonds	bond	NOUN
ajlm-1122	27	17	,	,	PUNCT
ajlm-1122	27	18	which	which	PRON
ajlm-1122	27	19	in	in	ADP
ajlm-1122	27	20	turn	turn	NOUN
ajlm-1122	27	21	allows	allow	VERB
ajlm-1122	27	22	for	for	ADP
ajlm-1122	27	23	proper	proper	ADJ
ajlm-1122	27	24	trypsin	trypsin	NOUN
ajlm-1122	27	25	digestion.2,9,10,11	digestion.2,9,10,11	NOUN
ajlm-1122	27	26	for	for	ADP
ajlm-1122	27	27	this	this	DET
ajlm-1122	27	28	reason	reason	NOUN
ajlm-1122	27	29	multiple	multiple	ADJ
ajlm-1122	27	30	strategies	strategy	NOUN
ajlm-1122	27	31	have	have	AUX
ajlm-1122	27	32	been	be	AUX
ajlm-1122	27	33	employed	employ	VERB
ajlm-1122	27	34	,	,	PUNCT
ajlm-1122	27	35	including	include	VERB
ajlm-1122	27	36	the	the	DET
ajlm-1122	27	37	use	use	NOUN
ajlm-1122	27	38	of	of	ADP
ajlm-1122	27	39	denaturants	denaturant	NOUN
ajlm-1122	27	40	,	,	PUNCT
ajlm-1122	27	41	detergents	detergent	NOUN
ajlm-1122	27	42	,	,	PUNCT
ajlm-1122	27	43	precipitants	precipitant	NOUN
ajlm-1122	27	44	and	and	CCONJ
ajlm-1122	27	45	antigen	antigen	ADJ
ajlm-1122	27	46	retrieval	retrieval	NOUN
ajlm-1122	27	47	.	.	PUNCT
ajlm-1122	28	1	however	however	ADV
ajlm-1122	28	2	,	,	PUNCT
ajlm-1122	28	3	several	several	ADJ
ajlm-1122	28	4	aspects	aspect	NOUN
ajlm-1122	28	5	of	of	ADP
ajlm-1122	28	6	the	the	DET
ajlm-1122	28	7	formaldehyde	formaldehyde	NOUN
ajlm-1122	28	8	-	-	PUNCT
ajlm-1122	28	9	protein	protein	NOUN
ajlm-1122	28	10	interactions	interaction	NOUN
ajlm-1122	28	11	remain	remain	VERB
ajlm-1122	28	12	unresolved	unresolved	ADJ
ajlm-1122	28	13	and	and	CCONJ
ajlm-1122	28	14	are	be	AUX
ajlm-1122	28	15	the	the	DET
ajlm-1122	28	16	focus	focus	NOUN
ajlm-1122	28	17	of	of	ADP
ajlm-1122	28	18	continued	continue	VERB
ajlm-1122	28	19	research	research	NOUN
ajlm-1122	28	20	in	in	ADP
ajlm-1122	28	21	the	the	DET
ajlm-1122	28	22	ffpe	ffpe	NOUN
ajlm-1122	28	23	proteomics	proteomic	NOUN
ajlm-1122	28	24	field	field	NOUN
ajlm-1122	28	25	.	.	PUNCT
ajlm-1122	29	1	we	we	PRON
ajlm-1122	29	2	have	have	AUX
ajlm-1122	29	3	previously	previously	ADV
ajlm-1122	29	4	studied	study	VERB
ajlm-1122	29	5	the	the	DET
ajlm-1122	29	6	effects	effect	NOUN
ajlm-1122	29	7	of	of	ADP
ajlm-1122	29	8	ffpe	ffpe	ADJ
ajlm-1122	29	9	block	block	NOUN
ajlm-1122	29	10	age	age	NOUN
ajlm-1122	29	11	on	on	ADP
ajlm-1122	29	12	the	the	DET
ajlm-1122	29	13	quality	quality	NOUN
ajlm-1122	29	14	and	and	CCONJ
ajlm-1122	29	15	quantity	quantity	NOUN
ajlm-1122	29	16	of	of	ADP
ajlm-1122	29	17	protein	protein	NOUN
ajlm-1122	29	18	extracted	extract	VERB
ajlm-1122	29	19	from	from	ADP
ajlm-1122	29	20	ffpe	ffpe	ADJ
ajlm-1122	29	21	tissues	tissue	NOUN
ajlm-1122	29	22	and	and	CCONJ
ajlm-1122	29	23	also	also	ADV
ajlm-1122	29	24	evaluated	evaluate	VERB
ajlm-1122	29	25	protein	protein	NOUN
ajlm-1122	29	26	purification	purification	NOUN
ajlm-1122	29	27	methods	method	NOUN
ajlm-1122	29	28	using	use	VERB
ajlm-1122	29	29	lc	lc	PROPN
ajlm-1122	29	30	-	-	PUNCT
ajlm-1122	29	31	ms	ms	PROPN
ajlm-1122	29	32	/	/	SYM
ajlm-1122	29	33	ms	ms	PROPN
ajlm-1122	29	34	analysis.12	analysis.12	PROPN
ajlm-1122	29	35	however	however	ADV
ajlm-1122	29	36	,	,	PUNCT
ajlm-1122	29	37	the	the	DET
ajlm-1122	29	38	optimal	optimal	ADJ
ajlm-1122	29	39	protein	protein	NOUN
ajlm-1122	29	40	extraction	extraction	NOUN
ajlm-1122	29	41	buffer	buffer	NOUN
ajlm-1122	29	42	components	component	NOUN
ajlm-1122	29	43	were	be	AUX
ajlm-1122	29	44	not	not	PART
ajlm-1122	29	45	investigated	investigate	VERB
ajlm-1122	29	46	.	.	PUNCT
ajlm-1122	30	1	therefore	therefore	ADV
ajlm-1122	30	2	,	,	PUNCT
ajlm-1122	30	3	of	of	ADP
ajlm-1122	30	4	interest	interest	NOUN
ajlm-1122	30	5	to	to	ADP
ajlm-1122	30	6	this	this	DET
ajlm-1122	30	7	study	study	NOUN
ajlm-1122	30	8	are	be	AUX
ajlm-1122	30	9	the	the	DET
ajlm-1122	30	10	effects	effect	NOUN
ajlm-1122	30	11	of	of	ADP
ajlm-1122	30	12	polyethylene	polyethylene	NOUN
ajlm-1122	30	13	glycol	glycol	NOUN
ajlm-1122	30	14	(	(	PUNCT
ajlm-1122	30	15	peg	peg	NOUN
ajlm-1122	30	16	)	)	PUNCT
ajlm-1122	30	17	,	,	PUNCT
ajlm-1122	30	18	specifically	specifically	ADV
ajlm-1122	30	19	peg	peg	VERB
ajlm-1122	30	20	20	20	NUM
ajlm-1122	30	21	000	000	NUM
ajlm-1122	30	22	,	,	PUNCT
ajlm-1122	30	23	on	on	ADP
ajlm-1122	30	24	protein	protein	NOUN
ajlm-1122	30	25	extraction	extraction	NOUN
ajlm-1122	30	26	efficiency	efficiency	NOUN
ajlm-1122	30	27	of	of	ADP
ajlm-1122	30	28	human	human	ADJ
ajlm-1122	30	29	ffpe	ffpe	NOUN
ajlm-1122	30	30	tissues	tissue	NOUN
ajlm-1122	30	31	using	use	VERB
ajlm-1122	30	32	lc	lc	PROPN
ajlm-1122	30	33	-	-	PUNCT
ajlm-1122	30	34	ms	ms	PROPN
ajlm-1122	30	35	/	/	SYM
ajlm-1122	30	36	ms	ms	NOUN
ajlm-1122	30	37	analysis	analysis	NOUN
ajlm-1122	30	38	,	,	PUNCT
ajlm-1122	30	39	as	as	SCONJ
ajlm-1122	30	40	there	there	PRON
ajlm-1122	30	41	is	be	VERB
ajlm-1122	30	42	no	no	DET
ajlm-1122	30	43	current	current	ADJ
ajlm-1122	30	44	consensus	consensus	NOUN
ajlm-1122	30	45	with	with	ADP
ajlm-1122	30	46	regard	regard	NOUN
ajlm-1122	30	47	to	to	ADP
ajlm-1122	30	48	peg	peg	NOUN
ajlm-1122	30	49	usage	usage	NOUN
ajlm-1122	30	50	and	and	CCONJ
ajlm-1122	30	51	advantages	advantage	NOUN
ajlm-1122	30	52	for	for	ADP
ajlm-1122	30	53	human	human	ADJ
ajlm-1122	30	54	ffpe	ffpe	NOUN
ajlm-1122	30	55	tissue	tissue	NOUN
ajlm-1122	30	56	proteomics	proteomic	NOUN
ajlm-1122	30	57	.	.	PUNCT
ajlm-1122	30	58	polyethylene	polyethylene	NOUN
ajlm-1122	30	59	glycol	glycol	NOUN
ajlm-1122	30	60	,	,	PUNCT
ajlm-1122	30	61	a	a	DET
ajlm-1122	30	62	high	high	ADJ
ajlm-1122	30	63	molecular	molecular	ADJ
ajlm-1122	30	64	weight	weight	NOUN
ajlm-1122	30	65	synthetic	synthetic	ADJ
ajlm-1122	30	66	polymer	polymer	NOUN
ajlm-1122	30	67	,	,	PUNCT
ajlm-1122	30	68	reduces	reduce	VERB
ajlm-1122	30	69	non	non	ADJ
ajlm-1122	30	70	-	-	ADJ
ajlm-1122	30	71	specific	specific	ADJ
ajlm-1122	30	72	protein	protein	NOUN
ajlm-1122	30	73	adsorption	adsorption	NOUN
ajlm-1122	30	74	to	to	ADP
ajlm-1122	30	75	surfaces	surface	NOUN
ajlm-1122	30	76	,	,	PUNCT
ajlm-1122	30	77	such	such	ADJ
ajlm-1122	30	78	as	as	ADP
ajlm-1122	30	79	experimental	experimental	ADJ
ajlm-1122	30	80	plastic	plastic	NOUN
ajlm-1122	30	81	-	-	PUNCT
ajlm-1122	30	82	ware	ware	NOUN
ajlm-1122	30	83	(	(	PUNCT
ajlm-1122	30	84	micropipette	micropipette	NOUN
ajlm-1122	30	85	tips	tip	NOUN
ajlm-1122	30	86	and	and	CCONJ
ajlm-1122	30	87	microcentrifuge	microcentrifuge	ADJ
ajlm-1122	30	88	tubes	tube	NOUN
ajlm-1122	30	89	)	)	PUNCT
ajlm-1122	30	90	,	,	PUNCT
ajlm-1122	30	91	thereby	thereby	ADV
ajlm-1122	30	92	preventing	prevent	VERB
ajlm-1122	30	93	subsequent	subsequent	ADJ
ajlm-1122	30	94	protein	protein	NOUN
ajlm-1122	30	95	loss.3,13	loss.3,13	NOUN
ajlm-1122	30	96	polyethylene	polyethylene	NOUN
ajlm-1122	30	97	glycols	glycol	NOUN
ajlm-1122	30	98	also	also	ADV
ajlm-1122	30	99	precipitate	precipitate	VERB
ajlm-1122	30	100	proteins	protein	NOUN
ajlm-1122	30	101	through	through	ADP
ajlm-1122	30	102	a	a	DET
ajlm-1122	30	103	steric	steric	ADJ
ajlm-1122	30	104	exclusion	exclusion	NOUN
ajlm-1122	30	105	mechanism	mechanism	NOUN
ajlm-1122	30	106	,	,	PUNCT
ajlm-1122	30	107	whereby	whereby	SCONJ
ajlm-1122	30	108	they	they	PRON
ajlm-1122	30	109	occupy	occupy	VERB
ajlm-1122	30	110	most	most	ADJ
ajlm-1122	30	111	of	of	ADP
ajlm-1122	30	112	the	the	DET
ajlm-1122	30	113	space	space	NOUN
ajlm-1122	30	114	in	in	ADP
ajlm-1122	30	115	solution	solution	NOUN
ajlm-1122	30	116	,	,	PUNCT
ajlm-1122	30	117	thus	thus	ADV
ajlm-1122	30	118	concentrating	concentrate	VERB
ajlm-1122	30	119	the	the	DET
ajlm-1122	30	120	proteins	protein	NOUN
ajlm-1122	30	121	until	until	SCONJ
ajlm-1122	30	122	they	they	PRON
ajlm-1122	30	123	exceed	exceed	VERB
ajlm-1122	30	124	solubility	solubility	NOUN
ajlm-1122	30	125	and	and	CCONJ
ajlm-1122	30	126	precipitate.14,15,16,17	precipitate.14,15,16,17	NOUN
ajlm-1122	30	127	therefore	therefore	ADV
ajlm-1122	30	128	,	,	PUNCT
ajlm-1122	30	129	subsequent	subsequent	ADJ
ajlm-1122	30	130	centrifugation	centrifugation	NOUN
ajlm-1122	30	131	may	may	AUX
ajlm-1122	30	132	pellet	pellet	VERB
ajlm-1122	30	133	the	the	DET
ajlm-1122	30	134	precipitated	precipitate	VERB
ajlm-1122	30	135	proteins17	proteins17	NOUN
ajlm-1122	30	136	and	and	CCONJ
ajlm-1122	30	137	these	these	PRON
ajlm-1122	30	138	may	may	AUX
ajlm-1122	30	139	be	be	AUX
ajlm-1122	30	140	lost	lose	VERB
ajlm-1122	30	141	in	in	ADP
ajlm-1122	30	142	the	the	DET
ajlm-1122	30	143	sample	sample	NOUN
ajlm-1122	30	144	pellets	pellet	NOUN
ajlm-1122	30	145	(	(	PUNCT
ajlm-1122	30	146	after	after	ADP
ajlm-1122	30	147	clarifying	clarify	VERB
ajlm-1122	30	148	the	the	DET
ajlm-1122	30	149	protein	protein	NOUN
ajlm-1122	30	150	lysates	lysate	NOUN
ajlm-1122	30	151	and	and	CCONJ
ajlm-1122	30	152	removal	removal	NOUN
ajlm-1122	30	153	of	of	ADP
ajlm-1122	30	154	the	the	DET
ajlm-1122	30	155	supernatants	supernatant	NOUN
ajlm-1122	30	156	for	for	ADP
ajlm-1122	30	157	analysis	analysis	NOUN
ajlm-1122	30	158	)	)	PUNCT
ajlm-1122	30	159	.	.	PUNCT
ajlm-1122	31	1	polyethylene	polyethylene	NOUN
ajlm-1122	31	2	glycol	glycol	NOUN
ajlm-1122	31	3	also	also	ADV
ajlm-1122	31	4	causes	cause	VERB
ajlm-1122	31	5	interference	interference	NOUN
ajlm-1122	31	6	and	and	CCONJ
ajlm-1122	31	7	ion	ion	NOUN
ajlm-1122	31	8	signal	signal	NOUN
ajlm-1122	31	9	suppression	suppression	NOUN
ajlm-1122	31	10	in	in	ADP
ajlm-1122	31	11	downstream	downstream	ADJ
ajlm-1122	31	12	lc	lc	PROPN
ajlm-1122	31	13	-	-	PUNCT
ajlm-1122	31	14	ms	ms	PROPN
ajlm-1122	31	15	/	/	SYM
ajlm-1122	31	16	ms	ms	NOUN
ajlm-1122	31	17	analysis	analysis	NOUN
ajlm-1122	31	18	,	,	PUNCT
ajlm-1122	31	19	if	if	SCONJ
ajlm-1122	31	20	it	it	PRON
ajlm-1122	31	21	is	be	AUX
ajlm-1122	31	22	not	not	PART
ajlm-1122	31	23	completely	completely	ADV
ajlm-1122	31	24	removed	remove	VERB
ajlm-1122	31	25	from	from	ADP
ajlm-1122	31	26	the	the	DET
ajlm-1122	31	27	sample	sample	NOUN
ajlm-1122	31	28	analysed.5,13	analysed.5,13	NOUN
ajlm-1122	31	29	removal	removal	NOUN
ajlm-1122	31	30	of	of	ADP
ajlm-1122	31	31	high	high	ADJ
ajlm-1122	31	32	concentrations	concentration	NOUN
ajlm-1122	31	33	of	of	ADP
ajlm-1122	31	34	pegs	peg	NOUN
ajlm-1122	31	35	is	be	AUX
ajlm-1122	31	36	challenging	challenge	VERB
ajlm-1122	31	37	and	and	CCONJ
ajlm-1122	31	38	peg	peg	NOUN
ajlm-1122	31	39	carry	carry	VERB
ajlm-1122	31	40	-	-	PUNCT
ajlm-1122	31	41	over	over	NOUN
ajlm-1122	31	42	into	into	ADP
ajlm-1122	31	43	sample	sample	NOUN
ajlm-1122	31	44	fractions	fraction	NOUN
ajlm-1122	31	45	and	and	CCONJ
ajlm-1122	31	46	lc	lc	NOUN
ajlm-1122	31	47	columns	column	NOUN
ajlm-1122	31	48	is	be	AUX
ajlm-1122	31	49	a	a	DET
ajlm-1122	31	50	huge	huge	ADJ
ajlm-1122	31	51	problem.14,18	problem.14,18	NOUN
ajlm-1122	31	52	however	however	ADV
ajlm-1122	31	53	,	,	PUNCT
ajlm-1122	31	54	due	due	ADP
ajlm-1122	31	55	to	to	ADP
ajlm-1122	31	56	its	its	PRON
ajlm-1122	31	57	advantages	advantage	NOUN
ajlm-1122	31	58	and	and	CCONJ
ajlm-1122	31	59	available	available	ADJ
ajlm-1122	31	60	techniques	technique	NOUN
ajlm-1122	31	61	to	to	PART
ajlm-1122	31	62	remove	remove	VERB
ajlm-1122	31	63	peg	peg	NOUN
ajlm-1122	31	64	before	before	ADP
ajlm-1122	31	65	lc	lc	PROPN
ajlm-1122	31	66	-	-	PUNCT
ajlm-1122	31	67	ms	ms	PROPN
ajlm-1122	31	68	/	/	SYM
ajlm-1122	31	69	ms	ms	NOUN
ajlm-1122	31	70	analysis	analysis	NOUN
ajlm-1122	31	71	,	,	PUNCT
ajlm-1122	31	72	it	it	PRON
ajlm-1122	31	73	is	be	AUX
ajlm-1122	31	74	often	often	ADV
ajlm-1122	31	75	used	use	VERB
ajlm-1122	31	76	for	for	ADP
ajlm-1122	31	77	protein	protein	NOUN
ajlm-1122	31	78	extraction	extraction	NOUN
ajlm-1122	31	79	of	of	ADP
ajlm-1122	31	80	ffpe	ffpe	NOUN
ajlm-1122	31	81	tissues.3,13	tissues.3,13	NUM
ajlm-1122	31	82	to	to	ADP
ajlm-1122	31	83	our	our	PRON
ajlm-1122	31	84	knowledge	knowledge	NOUN
ajlm-1122	31	85	,	,	PUNCT
ajlm-1122	31	86	however	however	ADV
ajlm-1122	31	87	,	,	PUNCT
ajlm-1122	31	88	peg	peg	NOUN
ajlm-1122	31	89	efficacy	efficacy	NOUN
ajlm-1122	31	90	with	with	ADP
ajlm-1122	31	91	regard	regard	NOUN
ajlm-1122	31	92	to	to	ADP
ajlm-1122	31	93	protein	protein	NOUN
ajlm-1122	31	94	extraction	extraction	NOUN
ajlm-1122	31	95	of	of	ADP
ajlm-1122	31	96	human	human	ADJ
ajlm-1122	31	97	ffpe	ffpe	NOUN
ajlm-1122	31	98	tissues	tissue	NOUN
ajlm-1122	31	99	has	have	AUX
ajlm-1122	31	100	not	not	PART
ajlm-1122	31	101	been	be	AUX
ajlm-1122	31	102	fully	fully	ADV
ajlm-1122	31	103	evaluated	evaluate	VERB
ajlm-1122	31	104	yet	yet	ADV
ajlm-1122	31	105	.	.	PUNCT
ajlm-1122	32	1	polyethylene	polyethylene	NOUN
ajlm-1122	32	2	glycol	glycol	NOUN
ajlm-1122	32	3	can	can	AUX
ajlm-1122	32	4	vary	vary	VERB
ajlm-1122	32	5	in	in	ADP
ajlm-1122	32	6	polymer	polymer	NOUN
ajlm-1122	32	7	size	size	NOUN
ajlm-1122	32	8	,	,	PUNCT
ajlm-1122	32	9	and	and	CCONJ
ajlm-1122	32	10	for	for	ADP
ajlm-1122	32	11	this	this	DET
ajlm-1122	32	12	study	study	NOUN
ajlm-1122	32	13	peg	peg	NOUN
ajlm-1122	32	14	20	20	NUM
ajlm-1122	32	15	000	000	NUM
ajlm-1122	32	16	was	be	AUX
ajlm-1122	32	17	chosen	choose	VERB
ajlm-1122	32	18	,	,	PUNCT
ajlm-1122	32	19	because	because	SCONJ
ajlm-1122	32	20	it	it	PRON
ajlm-1122	32	21	is	be	AUX
ajlm-1122	32	22	the	the	DET
ajlm-1122	32	23	most	most	ADV
ajlm-1122	32	24	extensively	extensively	ADV
ajlm-1122	32	25	used	use	VERB
ajlm-1122	32	26	form	form	NOUN
ajlm-1122	32	27	in	in	ADP
ajlm-1122	32	28	ffpe	ffpe	ADJ
ajlm-1122	32	29	tissue	tissue	NOUN
ajlm-1122	32	30	proteomics	proteomic	NOUN
ajlm-1122	32	31	;	;	PUNCT
ajlm-1122	32	32	subsequently	subsequently	ADV
ajlm-1122	32	33	all	all	DET
ajlm-1122	32	34	references	reference	NOUN
ajlm-1122	32	35	to	to	ADP
ajlm-1122	32	36	peg	peg	NOUN
ajlm-1122	32	37	in	in	ADP
ajlm-1122	32	38	this	this	DET
ajlm-1122	32	39	article	article	NOUN
ajlm-1122	32	40	are	be	AUX
ajlm-1122	32	41	to	to	ADP
ajlm-1122	32	42	the	the	DET
ajlm-1122	32	43	20	20	NUM
ajlm-1122	32	44	000	000	NUM
ajlm-1122	32	45	form	form	NOUN
ajlm-1122	32	46	.	.	PUNCT
ajlm-1122	33	1	the	the	DET
ajlm-1122	33	2	aim	aim	NOUN
ajlm-1122	33	3	of	of	ADP
ajlm-1122	33	4	this	this	DET
ajlm-1122	33	5	study	study	NOUN
ajlm-1122	33	6	was	be	AUX
ajlm-1122	33	7	to	to	PART
ajlm-1122	33	8	evaluate	evaluate	VERB
ajlm-1122	33	9	the	the	DET
ajlm-1122	33	10	effects	effect	NOUN
ajlm-1122	33	11	of	of	ADP
ajlm-1122	33	12	peg	peg	NOUN
ajlm-1122	33	13	within	within	ADP
ajlm-1122	33	14	the	the	DET
ajlm-1122	33	15	protein	protein	NOUN
ajlm-1122	33	16	extraction	extraction	NOUN
ajlm-1122	33	17	buffer	buffer	NOUN
ajlm-1122	33	18	using	use	VERB
ajlm-1122	33	19	label	label	NOUN
ajlm-1122	33	20	-	-	PUNCT
ajlm-1122	33	21	free	free	ADJ
ajlm-1122	33	22	lc	lc	PROPN
ajlm-1122	33	23	-	-	PUNCT
ajlm-1122	33	24	ms	ms	PROPN
ajlm-1122	33	25	/	/	SYM
ajlm-1122	33	26	ms	ms	NOUN
ajlm-1122	33	27	analysis	analysis	NOUN
ajlm-1122	33	28	of	of	ADP
ajlm-1122	33	29	manually	manually	ADV
ajlm-1122	33	30	micro	micro	VERB
ajlm-1122	33	31	-	-	ADJ
ajlm-1122	33	32	dissected	dissect	VERB
ajlm-1122	33	33	ffpe	ffpe	ADJ
ajlm-1122	33	34	human	human	ADJ
ajlm-1122	33	35	colorectal	colorectal	ADJ
ajlm-1122	33	36	carcinoma	carcinoma	NOUN
ajlm-1122	33	37	(	(	PUNCT
ajlm-1122	33	38	crc	crc	NOUN
ajlm-1122	33	39	)	)	PUNCT
ajlm-1122	33	40	resection	resection	NOUN
ajlm-1122	33	41	samples	sample	NOUN
ajlm-1122	33	42	.	.	PUNCT
ajlm-1122	34	1	the	the	DET
ajlm-1122	34	2	sample	sample	NOUN
ajlm-1122	34	3	pellets	pellet	NOUN
ajlm-1122	34	4	were	be	AUX
ajlm-1122	34	5	also	also	ADV
ajlm-1122	34	6	tested	test	VERB
ajlm-1122	34	7	for	for	ADP
ajlm-1122	34	8	residual	residual	ADJ
ajlm-1122	34	9	protein	protein	NOUN
ajlm-1122	34	10	,	,	PUNCT
ajlm-1122	34	11	which	which	PRON
ajlm-1122	34	12	was	be	AUX
ajlm-1122	34	13	not	not	PART
ajlm-1122	34	14	extracted	extract	VERB
ajlm-1122	34	15	in	in	ADP
ajlm-1122	34	16	the	the	DET
ajlm-1122	34	17	whole	whole	ADJ
ajlm-1122	34	18	cell	cell	NOUN
ajlm-1122	34	19	protein	protein	NOUN
ajlm-1122	34	20	lysates	lysate	NOUN
ajlm-1122	34	21	(	(	PUNCT
ajlm-1122	34	22	wcpls	wcpls	NOUN
ajlm-1122	34	23	)	)	PUNCT
ajlm-1122	34	24	.	.	PUNCT
ajlm-1122	35	1	methods	method	NOUN
ajlm-1122	35	2	ethical	ethical	ADJ
ajlm-1122	35	3	considerations	consideration	NOUN
ajlm-1122	35	4	ethics	ethic	NOUN
ajlm-1122	35	5	clearance	clearance	NOUN
ajlm-1122	35	6	was	be	AUX
ajlm-1122	35	7	obtained	obtain	VERB
ajlm-1122	35	8	from	from	ADP
ajlm-1122	35	9	the	the	DET
ajlm-1122	35	10	health	health	NOUN
ajlm-1122	35	11	research	research	PROPN
ajlm-1122	35	12	ethics	ethic	NOUN
ajlm-1122	35	13	committee	committee	PROPN
ajlm-1122	35	14	of	of	ADP
ajlm-1122	35	15	stellenbosch	stellenbosch	PROPN
ajlm-1122	35	16	university	university	PROPN
ajlm-1122	35	17	(	(	PUNCT
ajlm-1122	35	18	ethics	ethic	NOUN
ajlm-1122	35	19	reference	reference	NOUN
ajlm-1122	35	20	number	number	NOUN
ajlm-1122	35	21	:	:	PUNCT
ajlm-1122	35	22	s17/10/203	s17/10/203	NOUN
ajlm-1122	35	23	)	)	PUNCT
ajlm-1122	35	24	and	and	CCONJ
ajlm-1122	35	25	biomedical	biomedical	ADJ
ajlm-1122	35	26	science	science	NOUN
ajlm-1122	35	27	research	research	PROPN
ajlm-1122	35	28	ethics	ethic	NOUN
ajlm-1122	35	29	committee	committee	PROPN
ajlm-1122	35	30	of	of	ADP
ajlm-1122	35	31	the	the	DET
ajlm-1122	35	32	university	university	NOUN
ajlm-1122	35	33	of	of	ADP
ajlm-1122	35	34	the	the	DET
ajlm-1122	35	35	western	western	ADJ
ajlm-1122	35	36	cape	cape	NOUN
ajlm-1122	35	37	(	(	PUNCT
ajlm-1122	35	38	ethics	ethic	NOUN
ajlm-1122	35	39	reference	reference	NOUN
ajlm-1122	35	40	number	number	NOUN
ajlm-1122	35	41	:	:	PUNCT
ajlm-1122	35	42	bm17/7/15	bm17/7/15	PROPN
ajlm-1122	35	43	)	)	PUNCT
ajlm-1122	35	44	.	.	PUNCT
ajlm-1122	36	1	all	all	DET
ajlm-1122	36	2	patient	patient	ADJ
ajlm-1122	36	3	specimens	specimen	NOUN
ajlm-1122	36	4	were	be	AUX
ajlm-1122	36	5	anonymised	anonymise	VERB
ajlm-1122	36	6	before	before	ADP
ajlm-1122	36	7	being	be	AUX
ajlm-1122	36	8	archived	archive	VERB
ajlm-1122	36	9	for	for	ADP
ajlm-1122	36	10	long	long	ADJ
ajlm-1122	36	11	-	-	PUNCT
ajlm-1122	36	12	term	term	NOUN
ajlm-1122	36	13	storage	storage	NOUN
ajlm-1122	36	14	and	and	CCONJ
ajlm-1122	36	15	before	before	SCONJ
ajlm-1122	36	16	they	they	PRON
ajlm-1122	36	17	were	be	AUX
ajlm-1122	36	18	accessed	access	VERB
ajlm-1122	36	19	for	for	ADP
ajlm-1122	36	20	the	the	DET
ajlm-1122	36	21	study	study	NOUN
ajlm-1122	36	22	.	.	PUNCT
ajlm-1122	37	1	patient	patient	ADJ
ajlm-1122	37	2	consent	consent	NOUN
ajlm-1122	37	3	was	be	AUX
ajlm-1122	37	4	not	not	PART
ajlm-1122	37	5	required	require	VERB
ajlm-1122	37	6	since	since	SCONJ
ajlm-1122	37	7	it	it	PRON
ajlm-1122	37	8	was	be	AUX
ajlm-1122	37	9	a	a	DET
ajlm-1122	37	10	retrospective	retrospective	ADJ
ajlm-1122	37	11	study	study	NOUN
ajlm-1122	37	12	using	use	VERB
ajlm-1122	37	13	archival	archival	NOUN
ajlm-1122	37	14	tissues	tissue	NOUN
ajlm-1122	37	15	.	.	PUNCT
ajlm-1122	38	1	formalin	formalin	NOUN
ajlm-1122	38	2	-	-	PUNCT
ajlm-1122	38	3	fixed	fix	VERB
ajlm-1122	38	4	paraffin	paraffin	NOUN
ajlm-1122	38	5	-	-	PUNCT
ajlm-1122	38	6	embedded	embed	VERB
ajlm-1122	38	7	human	human	ADJ
ajlm-1122	38	8	colorectal	colorectal	ADJ
ajlm-1122	38	9	carcinoma	carcinoma	NOUN
ajlm-1122	38	10	samples	sample	NOUN
ajlm-1122	38	11	this	this	DET
ajlm-1122	38	12	study	study	NOUN
ajlm-1122	38	13	conducted	conduct	VERB
ajlm-1122	38	14	from	from	ADP
ajlm-1122	38	15	august	august	PROPN
ajlm-1122	38	16	2017	2017	NUM
ajlm-1122	38	17	to	to	ADP
ajlm-1122	38	18	july	july	PROPN
ajlm-1122	38	19	2019	2019	NUM
ajlm-1122	38	20	,	,	PUNCT
ajlm-1122	38	21	included	include	VERB
ajlm-1122	38	22	retrospectively	retrospectively	ADV
ajlm-1122	38	23	chosen	choose	VERB
ajlm-1122	38	24	human	human	ADJ
ajlm-1122	38	25	colorectal	colorectal	ADJ
ajlm-1122	38	26	resection	resection	NOUN
ajlm-1122	38	27	specimens	specimen	NOUN
ajlm-1122	38	28	acquired	acquire	VERB
ajlm-1122	38	29	from	from	ADP
ajlm-1122	38	30	the	the	DET
ajlm-1122	38	31	department	department	NOUN
ajlm-1122	38	32	of	of	ADP
ajlm-1122	38	33	anatomical	anatomical	ADJ
ajlm-1122	38	34	pathology	pathology	NOUN
ajlm-1122	38	35	at	at	ADP
ajlm-1122	38	36	tygerberg	tygerberg	PROPN
ajlm-1122	38	37	hospital	hospital	NOUN
ajlm-1122	38	38	in	in	ADP
ajlm-1122	38	39	western	western	ADJ
ajlm-1122	38	40	cape	cape	NOUN
ajlm-1122	38	41	,	,	PUNCT
ajlm-1122	38	42	south	south	PROPN
ajlm-1122	38	43	africa	africa	PROPN
ajlm-1122	38	44	.	.	PUNCT
ajlm-1122	39	1	the	the	DET
ajlm-1122	39	2	specimens	specimen	NOUN
ajlm-1122	39	3	were	be	AUX
ajlm-1122	39	4	preserved	preserve	VERB
ajlm-1122	39	5	as	as	ADP
ajlm-1122	39	6	ffpe	ffpe	NOUN
ajlm-1122	39	7	blocks	block	NOUN
ajlm-1122	39	8	when	when	SCONJ
ajlm-1122	39	9	the	the	DET
ajlm-1122	39	10	tissue	tissue	NOUN
ajlm-1122	39	11	was	be	AUX
ajlm-1122	39	12	resected	resect	VERB
ajlm-1122	39	13	and	and	CCONJ
ajlm-1122	39	14	archived	archive	VERB
ajlm-1122	39	15	between	between	ADP
ajlm-1122	39	16	january	january	PROPN
ajlm-1122	39	17	2016	2016	NUM
ajlm-1122	39	18	and	and	CCONJ
ajlm-1122	39	19	december	december	PROPN
ajlm-1122	39	20	2017	2017	NUM
ajlm-1122	39	21	.	.	PUNCT
ajlm-1122	40	1	due	due	ADP
ajlm-1122	40	2	to	to	ADP
ajlm-1122	40	3	retrospective	retrospective	ADJ
ajlm-1122	40	4	collection	collection	NOUN
ajlm-1122	40	5	of	of	ADP
ajlm-1122	40	6	the	the	DET
ajlm-1122	40	7	samples	sample	NOUN
ajlm-1122	40	8	,	,	PUNCT
ajlm-1122	40	9	the	the	DET
ajlm-1122	40	10	exact	exact	ADJ
ajlm-1122	40	11	pre	pre	ADJ
ajlm-1122	40	12	-	-	ADJ
ajlm-1122	40	13	analytical	analytical	ADJ
ajlm-1122	40	14	factors	factor	NOUN
ajlm-1122	40	15	,	,	PUNCT
ajlm-1122	40	16	such	such	ADJ
ajlm-1122	40	17	as	as	ADP
ajlm-1122	40	18	the	the	DET
ajlm-1122	40	19	handling	handling	NOUN
ajlm-1122	40	20	,	,	PUNCT
ajlm-1122	40	21	fixation	fixation	NOUN
ajlm-1122	40	22	times	time	NOUN
ajlm-1122	40	23	and	and	CCONJ
ajlm-1122	40	24	conditions	condition	NOUN
ajlm-1122	40	25	,	,	PUNCT
ajlm-1122	40	26	and	and	CCONJ
ajlm-1122	40	27	storage	storage	NOUN
ajlm-1122	40	28	conditions	condition	NOUN
ajlm-1122	40	29	,	,	PUNCT
ajlm-1122	40	30	were	be	AUX
ajlm-1122	40	31	unknown	unknown	ADJ
ajlm-1122	40	32	and	and	CCONJ
ajlm-1122	40	33	could	could	AUX
ajlm-1122	40	34	not	not	PART
ajlm-1122	40	35	be	be	AUX
ajlm-1122	40	36	accounted	account	VERB
ajlm-1122	40	37	for	for	ADP
ajlm-1122	40	38	.	.	PUNCT
ajlm-1122	41	1	table	table	NOUN
ajlm-1122	41	2	1	1	NUM
ajlm-1122	41	3	shows	show	VERB
ajlm-1122	41	4	the	the	DET
ajlm-1122	41	5	details	detail	NOUN
ajlm-1122	41	6	of	of	ADP
ajlm-1122	41	7	the	the	DET
ajlm-1122	41	8	three	three	NUM
ajlm-1122	41	9	patient	patient	ADJ
ajlm-1122	41	10	cases	case	NOUN
ajlm-1122	41	11	selected	select	VERB
ajlm-1122	41	12	.	.	PUNCT
ajlm-1122	42	1	table	table	NOUN
ajlm-1122	42	2	1	1	NUM
ajlm-1122	42	3	:	:	PUNCT
ajlm-1122	42	4	 	 	SPACE
ajlm-1122	42	5	details	detail	NOUN
ajlm-1122	42	6	of	of	ADP
ajlm-1122	42	7	the	the	DET
ajlm-1122	42	8	three	three	NUM
ajlm-1122	42	9	ffpe	ffpe	NOUN
ajlm-1122	42	10	patient	patient	ADJ
ajlm-1122	42	11	cases	case	NOUN
ajlm-1122	42	12	selected	select	VERB
ajlm-1122	42	13	for	for	ADP
ajlm-1122	42	14	analysis	analysis	NOUN
ajlm-1122	42	15	at	at	ADP
ajlm-1122	42	16	the	the	DET
ajlm-1122	42	17	south	south	ADJ
ajlm-1122	42	18	african	african	ADJ
ajlm-1122	42	19	national	national	PROPN
ajlm-1122	42	20	bioinformatics	bioinformatics	PROPN
ajlm-1122	42	21	institute	institute	PROPN
ajlm-1122	42	22	,	,	PUNCT
ajlm-1122	42	23	university	university	NOUN
ajlm-1122	42	24	of	of	ADP
ajlm-1122	42	25	the	the	DET
ajlm-1122	42	26	western	western	ADJ
ajlm-1122	42	27	cape	cape	NOUN
ajlm-1122	42	28	,	,	PUNCT
ajlm-1122	42	29	bellville	bellville	PROPN
ajlm-1122	42	30	,	,	PUNCT
ajlm-1122	42	31	south	south	PROPN
ajlm-1122	42	32	africa	africa	PROPN
ajlm-1122	42	33	,	,	PUNCT
ajlm-1122	42	34	from	from	ADP
ajlm-1122	42	35	august	august	PROPN
ajlm-1122	42	36	2017	2017	NUM
ajlm-1122	42	37	to	to	ADP
ajlm-1122	42	38	july	july	PROPN
ajlm-1122	42	39	2019	2019	NUM
ajlm-1122	42	40	.	.	PUNCT
ajlm-1122	43	1	to	to	PART
ajlm-1122	43	2	ensure	ensure	VERB
ajlm-1122	43	3	tissue	tissue	NOUN
ajlm-1122	43	4	quality	quality	NOUN
ajlm-1122	43	5	and	and	CCONJ
ajlm-1122	43	6	comparability	comparability	NOUN
ajlm-1122	43	7	,	,	PUNCT
ajlm-1122	43	8	a	a	DET
ajlm-1122	43	9	pathologist	pathologist	NOUN
ajlm-1122	43	10	reviewed	review	VERB
ajlm-1122	43	11	the	the	DET
ajlm-1122	43	12	patient	patient	ADJ
ajlm-1122	43	13	tissue	tissue	NOUN
ajlm-1122	43	14	sections	section	NOUN
ajlm-1122	43	15	after	after	ADP
ajlm-1122	43	16	haematoxylin	haematoxylin	NOUN
ajlm-1122	43	17	and	and	CCONJ
ajlm-1122	43	18	eosin	eosin	NOUN
ajlm-1122	43	19	staining	stain	VERB
ajlm-1122	43	20	to	to	PART
ajlm-1122	43	21	select	select	VERB
ajlm-1122	43	22	only	only	ADV
ajlm-1122	43	23	specimens	specimen	NOUN
ajlm-1122	43	24	that	that	PRON
ajlm-1122	43	25	had	have	VERB
ajlm-1122	43	26	carcinomas	carcinoma	NOUN
ajlm-1122	43	27	with	with	ADP
ajlm-1122	43	28	more	more	ADJ
ajlm-1122	43	29	than	than	ADP
ajlm-1122	43	30	90	90	NUM
ajlm-1122	43	31	%	%	NOUN
ajlm-1122	43	32	viable	viable	ADJ
ajlm-1122	43	33	tumour	tumour	NOUN
ajlm-1122	43	34	nuclei	nucleus	NOUN
ajlm-1122	43	35	(	(	PUNCT
ajlm-1122	43	36	figure	figure	NOUN
ajlm-1122	43	37	1	1	NUM
ajlm-1122	43	38	)	)	PUNCT
ajlm-1122	43	39	.	.	PUNCT
ajlm-1122	44	1	patient	patient	ADJ
ajlm-1122	44	2	samples	sample	NOUN
ajlm-1122	44	3	were	be	AUX
ajlm-1122	44	4	also	also	ADV
ajlm-1122	44	5	classified	classify	VERB
ajlm-1122	44	6	and	and	CCONJ
ajlm-1122	44	7	diagnosed	diagnose	VERB
ajlm-1122	44	8	with	with	ADP
ajlm-1122	44	9	low	low	ADJ
ajlm-1122	44	10	-	-	PUNCT
ajlm-1122	44	11	grade	grade	NOUN
ajlm-1122	44	12	or	or	CCONJ
ajlm-1122	44	13	high	high	ADJ
ajlm-1122	44	14	-	-	PUNCT
ajlm-1122	44	15	grade	grade	NOUN
ajlm-1122	44	16	colorectal	colorectal	ADJ
ajlm-1122	44	17	carcinoma	carcinoma	NOUN
ajlm-1122	44	18	after	after	SCONJ
ajlm-1122	44	19	haematoxylin	haematoxylin	NOUN
ajlm-1122	44	20	and	and	CCONJ
ajlm-1122	44	21	eosin	eosin	NOUN
ajlm-1122	44	22	staining	stain	VERB
ajlm-1122	44	23	.	.	PUNCT
ajlm-1122	45	1	figure	figure	VERB
ajlm-1122	45	2	1	1	NUM
ajlm-1122	45	3	:	:	PUNCT
ajlm-1122	45	4	colon	colon	NOUN
ajlm-1122	45	5	adenocarcinoma	adenocarcinoma	NOUN
ajlm-1122	45	6	tissue	tissue	NOUN
ajlm-1122	45	7	specimens	specimen	NOUN
ajlm-1122	45	8	analysed	analyse	VERB
ajlm-1122	45	9	at	at	ADP
ajlm-1122	45	10	the	the	DET
ajlm-1122	45	11	south	south	ADJ
ajlm-1122	45	12	african	african	ADJ
ajlm-1122	45	13	national	national	PROPN
ajlm-1122	45	14	bioinformatics	bioinformatics	PROPN
ajlm-1122	45	15	institute	institute	PROPN
ajlm-1122	45	16	,	,	PUNCT
ajlm-1122	45	17	university	university	NOUN
ajlm-1122	45	18	of	of	ADP
ajlm-1122	45	19	the	the	DET
ajlm-1122	45	20	western	western	ADJ
ajlm-1122	45	21	cape	cape	NOUN
ajlm-1122	45	22	,	,	PUNCT
ajlm-1122	45	23	bellville	bellville	PROPN
ajlm-1122	45	24	,	,	PUNCT
ajlm-1122	45	25	south	south	PROPN
ajlm-1122	45	26	africa	africa	PROPN
ajlm-1122	45	27	,	,	PUNCT
ajlm-1122	45	28	from	from	ADP
ajlm-1122	45	29	august	august	PROPN
ajlm-1122	45	30	2017	2017	NUM
ajlm-1122	45	31	to	to	ADP
ajlm-1122	45	32	july	july	PROPN
ajlm-1122	45	33	2019	2019	NUM
ajlm-1122	45	34	.	.	PUNCT
ajlm-1122	46	1	microscopic	microscopic	ADJ
ajlm-1122	46	2	images	image	NOUN
ajlm-1122	46	3	of	of	ADP
ajlm-1122	46	4	haematoxylin	haematoxylin	NOUN
ajlm-1122	46	5	and	and	CCONJ
ajlm-1122	46	6	eosin	eosin	NOUN
ajlm-1122	46	7	-	-	PUNCT
ajlm-1122	46	8	stained	stain	VERB
ajlm-1122	46	9	colon	colon	NOUN
ajlm-1122	46	10	tissue	tissue	NOUN
ajlm-1122	46	11	sections	section	NOUN
ajlm-1122	46	12	of	of	ADP
ajlm-1122	46	13	patient	patient	ADJ
ajlm-1122	46	14	resection	resection	NOUN
ajlm-1122	46	15	specimens	specimen	NOUN
ajlm-1122	46	16	analysed	analyse	VERB
ajlm-1122	46	17	in	in	ADP
ajlm-1122	46	18	this	this	DET
ajlm-1122	46	19	study	study	NOUN
ajlm-1122	46	20	:	:	PUNCT
ajlm-1122	46	21	patient	patient	NOUN
ajlm-1122	46	22	1	1	NUM
ajlm-1122	46	23	(	(	PUNCT
ajlm-1122	46	24	a	a	NOUN
ajlm-1122	46	25	)	)	PUNCT
ajlm-1122	46	26	,	,	PUNCT
ajlm-1122	46	27	patient	patient	NOUN
ajlm-1122	46	28	2	2	NUM
ajlm-1122	46	29	(	(	PUNCT
ajlm-1122	46	30	b	b	NOUN
ajlm-1122	46	31	)	)	PUNCT
ajlm-1122	46	32	and	and	CCONJ
ajlm-1122	46	33	patient	patient	ADJ
ajlm-1122	46	34	3	3	NUM
ajlm-1122	46	35	(	(	PUNCT
ajlm-1122	46	36	c	c	NOUN
ajlm-1122	46	37	)	)	PUNCT
ajlm-1122	46	38	at	at	ADP
ajlm-1122	46	39	100×	100×	PROPN
ajlm-1122	46	40	magnification	magnification	NOUN
ajlm-1122	46	41	.	.	PUNCT
ajlm-1122	47	1	protein	protein	NOUN
ajlm-1122	47	2	extraction	extraction	NOUN
ajlm-1122	47	3	and	and	CCONJ
ajlm-1122	47	4	purification	purification	NOUN
ajlm-1122	47	5	to	to	PART
ajlm-1122	47	6	overcome	overcome	VERB
ajlm-1122	47	7	the	the	DET
ajlm-1122	47	8	effects	effect	NOUN
ajlm-1122	47	9	of	of	ADP
ajlm-1122	47	10	formaldehyde	formaldehyde	NOUN
ajlm-1122	47	11	cross	cross	NOUN
ajlm-1122	47	12	-	-	ADJ
ajlm-1122	47	13	linking	linking	ADJ
ajlm-1122	47	14	,	,	PUNCT
ajlm-1122	47	15	we	we	PRON
ajlm-1122	47	16	opted	opt	VERB
ajlm-1122	47	17	to	to	PART
ajlm-1122	47	18	combine	combine	VERB
ajlm-1122	47	19	protein	protein	NOUN
ajlm-1122	47	20	extraction	extraction	NOUN
ajlm-1122	47	21	techniques	technique	NOUN
ajlm-1122	47	22	that	that	PRON
ajlm-1122	47	23	employed	employ	VERB
ajlm-1122	47	24	the	the	DET
ajlm-1122	47	25	use	use	NOUN
ajlm-1122	47	26	of	of	ADP
ajlm-1122	47	27	antigen	antigen	ADJ
ajlm-1122	47	28	retrieval	retrieval	NOUN
ajlm-1122	47	29	,	,	PUNCT
ajlm-1122	47	30	strong	strong	ADJ
ajlm-1122	47	31	detergent	detergent	NOUN
ajlm-1122	47	32	concentration	concentration	NOUN
ajlm-1122	47	33	,	,	PUNCT
ajlm-1122	47	34	as	as	ADV
ajlm-1122	47	35	well	well	ADV
ajlm-1122	47	36	as	as	ADP
ajlm-1122	47	37	a	a	DET
ajlm-1122	47	38	synthetic	synthetic	ADJ
ajlm-1122	47	39	polymer	polymer	NOUN
ajlm-1122	47	40	for	for	ADP
ajlm-1122	47	41	protein	protein	NOUN
ajlm-1122	47	42	precipitation	precipitation	NOUN
ajlm-1122	47	43	(	(	PUNCT
ajlm-1122	47	44	peg	peg	NOUN
ajlm-1122	47	45	20	20	NUM
ajlm-1122	47	46	000	000	NUM
ajlm-1122	47	47	)	)	PUNCT
ajlm-1122	47	48	.	.	PUNCT
ajlm-1122	48	1	for	for	ADP
ajlm-1122	48	2	protein	protein	NOUN
ajlm-1122	48	3	purification	purification	NOUN
ajlm-1122	48	4	before	before	ADP
ajlm-1122	48	5	lc	lc	PROPN
ajlm-1122	48	6	-	-	PUNCT
ajlm-1122	48	7	ms	ms	PROPN
ajlm-1122	48	8	/	/	SYM
ajlm-1122	48	9	ms	ms	NOUN
ajlm-1122	48	10	analysis	analysis	NOUN
ajlm-1122	48	11	,	,	PUNCT
ajlm-1122	48	12	we	we	PRON
ajlm-1122	48	13	used	use	VERB
ajlm-1122	48	14	the	the	DET
ajlm-1122	48	15	single	single	ADJ
ajlm-1122	48	16	-	-	PUNCT
ajlm-1122	48	17	pot	pot	NOUN
ajlm-1122	48	18	solid	solid	ADJ
ajlm-1122	48	19	-	-	PUNCT
ajlm-1122	48	20	phase	phase	NOUN
ajlm-1122	48	21	-	-	PUNCT
ajlm-1122	48	22	enhanced	enhance	VERB
ajlm-1122	48	23	sample	sample	NOUN
ajlm-1122	48	24	preparation	preparation	NOUN
ajlm-1122	48	25	(	(	PUNCT
ajlm-1122	48	26	sp3)19,20	sp3)19,20	NOUN
ajlm-1122	48	27	method	method	NOUN
ajlm-1122	48	28	,	,	PUNCT
ajlm-1122	48	29	which	which	PRON
ajlm-1122	48	30	ensures	ensure	VERB
ajlm-1122	48	31	minimal	minimal	ADJ
ajlm-1122	48	32	sample	sample	NOUN
ajlm-1122	48	33	loss	loss	NOUN
ajlm-1122	48	34	during	during	ADP
ajlm-1122	48	35	processing	processing	NOUN
ajlm-1122	48	36	and	and	CCONJ
ajlm-1122	48	37	was	be	AUX
ajlm-1122	48	38	also	also	ADV
ajlm-1122	48	39	found	find	VERB
ajlm-1122	48	40	to	to	PART
ajlm-1122	48	41	be	be	AUX
ajlm-1122	48	42	highly	highly	ADV
ajlm-1122	48	43	sensitive	sensitive	ADJ
ajlm-1122	48	44	,	,	PUNCT
ajlm-1122	48	45	therefore	therefore	ADV
ajlm-1122	48	46	requiring	require	VERB
ajlm-1122	48	47	less	less	ADJ
ajlm-1122	48	48	starting	starting	NOUN
ajlm-1122	48	49	material	material	NOUN
ajlm-1122	48	50	(	(	PUNCT
ajlm-1122	48	51	tissue).12,19,20	tissue).12,19,20	VERB
ajlm-1122	48	52	the	the	DET
ajlm-1122	48	53	equivalence	equivalence	NOUN
ajlm-1122	48	54	of	of	ADP
ajlm-1122	48	55	23	23	NUM
ajlm-1122	48	56	mm3	mm3	NOUN
ajlm-1122	48	57	of	of	ADP
ajlm-1122	48	58	manually	manually	ADV
ajlm-1122	48	59	micro	micro	VERB
ajlm-1122	48	60	-	-	ADJ
ajlm-1122	48	61	dissected	dissected	ADJ
ajlm-1122	48	62	ffpe	ffpe	NOUN
ajlm-1122	48	63	tumour	tumour	NOUN
ajlm-1122	48	64	tissue	tissue	NOUN
ajlm-1122	48	65	was	be	AUX
ajlm-1122	48	66	cut	cut	VERB
ajlm-1122	48	67	and	and	CCONJ
ajlm-1122	48	68	processed	process	VERB
ajlm-1122	48	69	for	for	ADP
ajlm-1122	48	70	each	each	DET
ajlm-1122	48	71	patient	patient	ADJ
ajlm-1122	48	72	case	case	NOUN
ajlm-1122	48	73	(	(	PUNCT
ajlm-1122	48	74	figure	figure	NOUN
ajlm-1122	48	75	2	2	NUM
ajlm-1122	48	76	)	)	PUNCT
ajlm-1122	48	77	.	.	PUNCT
ajlm-1122	49	1	protein	protein	NOUN
ajlm-1122	49	2	was	be	AUX
ajlm-1122	49	3	extracted	extract	VERB
ajlm-1122	49	4	using	use	VERB
ajlm-1122	49	5	a	a	DET
ajlm-1122	49	6	solution	solution	NOUN
ajlm-1122	49	7	that	that	PRON
ajlm-1122	49	8	consisted	consist	VERB
ajlm-1122	49	9	of	of	ADP
ajlm-1122	49	10	50	50	NUM
ajlm-1122	49	11	mm	mm	NOUN
ajlm-1122	49	12	of	of	ADP
ajlm-1122	49	13	ammonium	ammonium	NOUN
ajlm-1122	49	14	bicarbonate	bicarbonate	NOUN
ajlm-1122	49	15	(	(	PUNCT
ajlm-1122	49	16	ph	ph	NOUN
ajlm-1122	49	17	8.0	8.0	NUM
ajlm-1122	49	18	)	)	PUNCT
ajlm-1122	49	19	and	and	CCONJ
ajlm-1122	49	20	2	2	NUM
ajlm-1122	49	21	%	%	NOUN
ajlm-1122	49	22	sodium	sodium	NOUN
ajlm-1122	49	23	dodecyl	dodecyl	NOUN
ajlm-1122	49	24	sulphate	sulphate	NOUN
ajlm-1122	49	25	(	(	PUNCT
ajlm-1122	49	26	sds	sds	PROPN
ajlm-1122	49	27	)	)	PUNCT
ajlm-1122	49	28	and	and	CCONJ
ajlm-1122	49	29	either	either	ADV
ajlm-1122	49	30	with	with	ADP
ajlm-1122	49	31	or	or	CCONJ
ajlm-1122	49	32	without	without	ADP
ajlm-1122	49	33	the	the	DET
ajlm-1122	49	34	addition	addition	NOUN
ajlm-1122	49	35	of	of	ADP
ajlm-1122	49	36	0.5	0.5	NUM
ajlm-1122	49	37	%	%	NOUN
ajlm-1122	49	38	peg	peg	NOUN
ajlm-1122	49	39	.	.	PUNCT
ajlm-1122	50	1	to	to	PART
ajlm-1122	50	2	further	far	ADV
ajlm-1122	50	3	determine	determine	VERB
ajlm-1122	50	4	protein	protein	NOUN
ajlm-1122	50	5	extraction	extraction	NOUN
ajlm-1122	50	6	buffer	buffer	NOUN
ajlm-1122	50	7	efficiency	efficiency	NOUN
ajlm-1122	50	8	,	,	PUNCT
ajlm-1122	50	9	the	the	DET
ajlm-1122	50	10	sample	sample	NOUN
ajlm-1122	50	11	pellets	pellet	NOUN
ajlm-1122	50	12	were	be	AUX
ajlm-1122	50	13	also	also	ADV
ajlm-1122	50	14	assessed	assess	VERB
ajlm-1122	50	15	for	for	ADP
ajlm-1122	50	16	residual	residual	ADJ
ajlm-1122	50	17	proteins	protein	NOUN
ajlm-1122	50	18	that	that	PRON
ajlm-1122	50	19	were	be	AUX
ajlm-1122	50	20	not	not	PART
ajlm-1122	50	21	extracted	extract	VERB
ajlm-1122	50	22	in	in	ADP
ajlm-1122	50	23	the	the	DET
ajlm-1122	50	24	initial	initial	ADJ
ajlm-1122	50	25	extraction	extraction	NOUN
ajlm-1122	50	26	.	.	PUNCT
ajlm-1122	51	1	in	in	ADP
ajlm-1122	51	2	total	total	ADJ
ajlm-1122	51	3	,	,	PUNCT
ajlm-1122	51	4	12	12	NUM
ajlm-1122	51	5	samples	sample	NOUN
ajlm-1122	51	6	were	be	AUX
ajlm-1122	51	7	analysed	analyse	VERB
ajlm-1122	51	8	,	,	PUNCT
ajlm-1122	51	9	including	include	VERB
ajlm-1122	51	10	the	the	DET
ajlm-1122	51	11	wcpls	wcpls	NOUN
ajlm-1122	51	12	as	as	ADV
ajlm-1122	51	13	well	well	ADV
ajlm-1122	51	14	as	as	ADP
ajlm-1122	51	15	the	the	DET
ajlm-1122	51	16	sample	sample	NOUN
ajlm-1122	51	17	pellets	pellet	NOUN
ajlm-1122	51	18	(	(	PUNCT
ajlm-1122	51	19	figure	figure	NOUN
ajlm-1122	51	20	2	2	NUM
ajlm-1122	51	21	)	)	PUNCT
ajlm-1122	51	22	.	.	PUNCT
ajlm-1122	52	1	figure	figure	NOUN
ajlm-1122	52	2	2	2	NUM
ajlm-1122	52	3	:	:	PUNCT
ajlm-1122	52	4	summarised	summarise	VERB
ajlm-1122	52	5	workflow	workflow	NOUN
ajlm-1122	52	6	and	and	CCONJ
ajlm-1122	52	7	experimental	experimental	ADJ
ajlm-1122	52	8	design	design	NOUN
ajlm-1122	52	9	followed	follow	VERB
ajlm-1122	52	10	at	at	ADP
ajlm-1122	52	11	the	the	DET
ajlm-1122	52	12	south	south	ADJ
ajlm-1122	52	13	african	african	ADJ
ajlm-1122	52	14	national	national	PROPN
ajlm-1122	52	15	bioinformatics	bioinformatics	PROPN
ajlm-1122	52	16	institute	institute	PROPN
ajlm-1122	52	17	,	,	PUNCT
ajlm-1122	52	18	university	university	NOUN
ajlm-1122	52	19	of	of	ADP
ajlm-1122	52	20	the	the	DET
ajlm-1122	52	21	western	western	ADJ
ajlm-1122	52	22	cape	cape	NOUN
ajlm-1122	52	23	,	,	PUNCT
ajlm-1122	52	24	bellville	bellville	PROPN
ajlm-1122	52	25	,	,	PUNCT
ajlm-1122	52	26	south	south	PROPN
ajlm-1122	52	27	africa	africa	PROPN
ajlm-1122	52	28	,	,	PUNCT
ajlm-1122	52	29	from	from	ADP
ajlm-1122	52	30	august	august	PROPN
ajlm-1122	52	31	2017	2017	NUM
ajlm-1122	52	32	to	to	ADP
ajlm-1122	52	33	july	july	PROPN
ajlm-1122	52	34	2019	2019	NUM
ajlm-1122	52	35	.	.	PUNCT
ajlm-1122	53	1	ffpe	ffpe	ADJ
ajlm-1122	53	2	colorectal	colorectal	ADJ
ajlm-1122	53	3	carcinoma	carcinoma	NOUN
ajlm-1122	53	4	tissue	tissue	NOUN
ajlm-1122	53	5	from	from	ADP
ajlm-1122	53	6	three	three	NUM
ajlm-1122	53	7	patients	patient	NOUN
ajlm-1122	53	8	were	be	AUX
ajlm-1122	53	9	cut	cut	VERB
ajlm-1122	53	10	at	at	ADP
ajlm-1122	53	11	25	25	NUM
ajlm-1122	53	12	µm	µm	ADP
ajlm-1122	53	13	thickness	thickness	NOUN
ajlm-1122	53	14	and	and	CCONJ
ajlm-1122	53	15	tumour	tumour	NOUN
ajlm-1122	53	16	areas	area	NOUN
ajlm-1122	53	17	were	be	AUX
ajlm-1122	53	18	manually	manually	ADV
ajlm-1122	53	19	micro	micro	VERB
ajlm-1122	53	20	-	-	VERB
ajlm-1122	53	21	dissected	dissect	VERB
ajlm-1122	53	22	for	for	ADP
ajlm-1122	53	23	analysis	analysis	NOUN
ajlm-1122	53	24	.	.	PUNCT
ajlm-1122	54	1	from	from	ADP
ajlm-1122	54	2	each	each	DET
ajlm-1122	54	3	patient	patient	ADJ
ajlm-1122	54	4	ffpe	ffpe	NOUN
ajlm-1122	54	5	block	block	NOUN
ajlm-1122	54	6	,	,	PUNCT
ajlm-1122	54	7	4	4	NUM
ajlm-1122	54	8	tissue	tissue	NOUN
ajlm-1122	54	9	sections	section	NOUN
ajlm-1122	54	10	(	(	PUNCT
ajlm-1122	54	11	each	each	PRON
ajlm-1122	54	12	25	25	NUM
ajlm-1122	54	13	µm	µm	ADP
ajlm-1122	54	14	thick	thick	ADJ
ajlm-1122	54	15	and	and	CCONJ
ajlm-1122	54	16	equivalent	equivalent	ADJ
ajlm-1122	54	17	to	to	ADP
ajlm-1122	54	18	approximately	approximately	ADV
ajlm-1122	54	19	23	23	NUM
ajlm-1122	54	20	mm3	mm3	ADJ
ajlm-1122	54	21	tissue	tissue	NOUN
ajlm-1122	54	22	)	)	PUNCT
ajlm-1122	54	23	were	be	AUX
ajlm-1122	54	24	used	use	VERB
ajlm-1122	54	25	per	per	ADP
ajlm-1122	54	26	experimental	experimental	ADJ
ajlm-1122	54	27	sample	sample	NOUN
ajlm-1122	54	28	.	.	PUNCT
ajlm-1122	55	1	protein	protein	NOUN
ajlm-1122	55	2	extraction	extraction	NOUN
ajlm-1122	55	3	buffer	buffer	NOUN
ajlm-1122	55	4	,	,	PUNCT
ajlm-1122	55	5	with	with	ADP
ajlm-1122	55	6	or	or	CCONJ
ajlm-1122	55	7	without	without	ADP
ajlm-1122	55	8	the	the	DET
ajlm-1122	55	9	addition	addition	NOUN
ajlm-1122	55	10	of	of	ADP
ajlm-1122	55	11	peg	peg	NOUN
ajlm-1122	55	12	,	,	PUNCT
ajlm-1122	55	13	was	be	AUX
ajlm-1122	55	14	used	use	VERB
ajlm-1122	55	15	to	to	PART
ajlm-1122	55	16	extract	extract	VERB
ajlm-1122	55	17	protein	protein	NOUN
ajlm-1122	55	18	.	.	PUNCT
ajlm-1122	56	1	sample	sample	NOUN
ajlm-1122	56	2	pellets	pellet	NOUN
ajlm-1122	56	3	were	be	AUX
ajlm-1122	56	4	analysed	analyse	VERB
ajlm-1122	56	5	for	for	ADP
ajlm-1122	56	6	residual	residual	ADJ
ajlm-1122	56	7	protein	protein	NOUN
ajlm-1122	56	8	by	by	ADP
ajlm-1122	56	9	further	further	ADJ
ajlm-1122	56	10	protein	protein	NOUN
ajlm-1122	56	11	extraction	extraction	NOUN
ajlm-1122	56	12	(	(	PUNCT
ajlm-1122	56	13	using	use	VERB
ajlm-1122	56	14	4	4	NUM
ajlm-1122	56	15	%	%	NOUN
ajlm-1122	56	16	sds	sds	NOUN
ajlm-1122	56	17	)	)	PUNCT
ajlm-1122	56	18	,	,	PUNCT
ajlm-1122	56	19	followed	follow	VERB
ajlm-1122	56	20	by	by	ADP
ajlm-1122	56	21	protein	protein	NOUN
ajlm-1122	56	22	quantification	quantification	NOUN
ajlm-1122	56	23	and	and	CCONJ
ajlm-1122	56	24	subsequent	subsequent	ADJ
ajlm-1122	56	25	sample	sample	NOUN
ajlm-1122	56	26	processing	processing	NOUN
ajlm-1122	56	27	(	(	PUNCT
ajlm-1122	56	28	for	for	ADP
ajlm-1122	56	29	lc	lc	PROPN
ajlm-1122	56	30	-	-	PUNCT
ajlm-1122	56	31	ms	ms	PROPN
ajlm-1122	56	32	/	/	SYM
ajlm-1122	56	33	ms	ms	NOUN
ajlm-1122	56	34	analysis	analysis	NOUN
ajlm-1122	56	35	)	)	PUNCT
ajlm-1122	56	36	by	by	ADP
ajlm-1122	56	37	the	the	DET
ajlm-1122	56	38	hilic	hilic	NOUN
ajlm-1122	56	39	/	/	SYM
ajlm-1122	56	40	sp3	sp3	NOUN
ajlm-1122	56	41	method	method	NOUN
ajlm-1122	56	42	.	.	PUNCT
ajlm-1122	57	1	wcpls	wcpls	NOUN
ajlm-1122	57	2	from	from	ADP
ajlm-1122	57	3	each	each	DET
ajlm-1122	57	4	patient	patient	NOUN
ajlm-1122	57	5	were	be	AUX
ajlm-1122	57	6	quantified	quantify	VERB
ajlm-1122	57	7	and	and	CCONJ
ajlm-1122	57	8	processed	process	VERB
ajlm-1122	57	9	by	by	ADP
ajlm-1122	57	10	the	the	DET
ajlm-1122	57	11	hilic	hilic	NOUN
ajlm-1122	57	12	/	/	SYM
ajlm-1122	57	13	sp3	sp3	NOUN
ajlm-1122	57	14	sample	sample	NOUN
ajlm-1122	57	15	preparation	preparation	NOUN
ajlm-1122	57	16	method	method	NOUN
ajlm-1122	57	17	,	,	PUNCT
ajlm-1122	57	18	followed	follow	VERB
ajlm-1122	57	19	by	by	ADP
ajlm-1122	57	20	ms	ms	ADJ
ajlm-1122	57	21	analysis	analysis	NOUN
ajlm-1122	57	22	.	.	PUNCT
ajlm-1122	58	1	the	the	DET
ajlm-1122	58	2	mass	mass	PROPN
ajlm-1122	58	3	spectra	spectra	PROPN
ajlm-1122	58	4	generated	generate	VERB
ajlm-1122	58	5	were	be	AUX
ajlm-1122	58	6	then	then	ADV
ajlm-1122	58	7	analysed	analyse	VERB
ajlm-1122	58	8	during	during	ADP
ajlm-1122	58	9	the	the	DET
ajlm-1122	58	10	data	datum	NOUN
ajlm-1122	58	11	analysis	analysis	NOUN
ajlm-1122	58	12	phase	phase	NOUN
ajlm-1122	58	13	.	.	PUNCT
ajlm-1122	59	1	the	the	DET
ajlm-1122	59	2	method	method	NOUN
ajlm-1122	59	3	used	use	VERB
ajlm-1122	59	4	for	for	ADP
ajlm-1122	59	5	sample	sample	NOUN
ajlm-1122	59	6	processing	processing	NOUN
ajlm-1122	59	7	,	,	PUNCT
ajlm-1122	59	8	protein	protein	NOUN
ajlm-1122	59	9	extraction	extraction	NOUN
ajlm-1122	59	10	and	and	CCONJ
ajlm-1122	59	11	protein	protein	NOUN
ajlm-1122	59	12	yield	yield	NOUN
ajlm-1122	59	13	quantification	quantification	NOUN
ajlm-1122	59	14	was	be	AUX
ajlm-1122	59	15	modified	modify	VERB
ajlm-1122	59	16	from	from	ADP
ajlm-1122	59	17	the	the	DET
ajlm-1122	59	18	protocols	protocol	NOUN
ajlm-1122	59	19	used	use	VERB
ajlm-1122	59	20	by	by	ADP
ajlm-1122	59	21	scicchitano21	scicchitano21	NOUN
ajlm-1122	59	22	and	and	CCONJ
ajlm-1122	59	23	wiśniewski22	wiśniewski22	NOUN
ajlm-1122	59	24	and	and	CCONJ
ajlm-1122	59	25	previously	previously	ADV
ajlm-1122	59	26	described	describe	VERB
ajlm-1122	59	27	in	in	ADP
ajlm-1122	59	28	more	more	ADJ
ajlm-1122	59	29	detail	detail	NOUN
ajlm-1122	59	30	by	by	ADP
ajlm-1122	59	31	rossouw.12	rossouw.12	NOUN
ajlm-1122	59	32	both	both	DET
ajlm-1122	59	33	wcpls	wcpls	NOUN
ajlm-1122	59	34	and	and	CCONJ
ajlm-1122	59	35	sample	sample	NOUN
ajlm-1122	59	36	pellets	pellet	NOUN
ajlm-1122	59	37	were	be	AUX
ajlm-1122	59	38	subsequently	subsequently	ADV
ajlm-1122	59	39	processed	process	VERB
ajlm-1122	59	40	by	by	ADP
ajlm-1122	59	41	the	the	DET
ajlm-1122	59	42	hydrophilic	hydrophilic	ADJ
ajlm-1122	59	43	interaction	interaction	NOUN
ajlm-1122	59	44	liquid	liquid	ADJ
ajlm-1122	59	45	chromatography	chromatography	NOUN
ajlm-1122	59	46	(	(	PUNCT
ajlm-1122	59	47	hilic)/sp3	hilic)/sp3	PROPN
ajlm-1122	59	48	magnetic	magnetic	ADJ
ajlm-1122	59	49	bead	bead	NOUN
ajlm-1122	59	50	digestion	digestion	NOUN
ajlm-1122	59	51	method,19	method,19	NOUN
ajlm-1122	59	52	before	before	ADP
ajlm-1122	59	53	lc	lc	PROPN
ajlm-1122	59	54	-	-	PUNCT
ajlm-1122	59	55	ms	ms	PROPN
ajlm-1122	59	56	/	/	SYM
ajlm-1122	59	57	ms	ms	NOUN
ajlm-1122	59	58	analysis	analysis	NOUN
ajlm-1122	59	59	(	(	PUNCT
ajlm-1122	59	60	figure	figure	NOUN
ajlm-1122	59	61	2	2	NUM
ajlm-1122	59	62	)	)	PUNCT
ajlm-1122	59	63	.	.	PUNCT
ajlm-1122	60	1	the	the	DET
ajlm-1122	60	2	magresyn	magresyn	PROPN
ajlm-1122	60	3	®	®	PROPN
ajlm-1122	60	4	(	(	PUNCT
ajlm-1122	60	5	resyn	resyn	NOUN
ajlm-1122	60	6	biosciences	bioscience	NOUN
ajlm-1122	60	7	,	,	PUNCT
ajlm-1122	60	8	edenvale	edenvale	NOUN
ajlm-1122	60	9	,	,	PUNCT
ajlm-1122	60	10	gauteng	gauteng	PROPN
ajlm-1122	60	11	,	,	PUNCT
ajlm-1122	60	12	south	south	PROPN
ajlm-1122	60	13	africa	africa	PROPN
ajlm-1122	60	14	)	)	PUNCT
ajlm-1122	60	15	hilic	hilic	PROPN
ajlm-1122	60	16	/	/	SYM
ajlm-1122	60	17	sp3	sp3	NOUN
ajlm-1122	60	18	method	method	NOUN
ajlm-1122	60	19	(	(	PUNCT
ajlm-1122	60	20	using	use	VERB
ajlm-1122	60	21	on	on	ADP
ajlm-1122	60	22	-	-	PUNCT
ajlm-1122	60	23	bead	bead	NOUN
ajlm-1122	60	24	digestion	digestion	NOUN
ajlm-1122	60	25	)	)	PUNCT
ajlm-1122	60	26	was	be	AUX
ajlm-1122	60	27	used	use	VERB
ajlm-1122	60	28	for	for	ADP
ajlm-1122	60	29	protein	protein	NOUN
ajlm-1122	60	30	purification	purification	NOUN
ajlm-1122	60	31	and	and	CCONJ
ajlm-1122	60	32	tryptic	tryptic	ADJ
ajlm-1122	60	33	digestion	digestion	NOUN
ajlm-1122	60	34	(	(	PUNCT
ajlm-1122	60	35	peptide	peptide	NOUN
ajlm-1122	60	36	generation	generation	NOUN
ajlm-1122	60	37	)	)	PUNCT
ajlm-1122	60	38	prior	prior	ADV
ajlm-1122	60	39	to	to	ADP
ajlm-1122	60	40	lc	lc	NOUN
ajlm-1122	60	41	-	-	PUNCT
ajlm-1122	60	42	ms	ms	PROPN
ajlm-1122	60	43	/	/	SYM
ajlm-1122	60	44	ms	ms	NOUN
ajlm-1122	60	45	analysis	analysis	NOUN
ajlm-1122	60	46	.	.	PUNCT
ajlm-1122	61	1	the	the	DET
ajlm-1122	61	2	method	method	NOUN
ajlm-1122	61	3	was	be	AUX
ajlm-1122	61	4	modified	modify	VERB
ajlm-1122	61	5	from	from	ADP
ajlm-1122	61	6	the	the	DET
ajlm-1122	61	7	protocol	protocol	NOUN
ajlm-1122	61	8	used	use	VERB
ajlm-1122	61	9	by	by	ADP
ajlm-1122	61	10	hughes19	hughes19	NOUN
ajlm-1122	61	11	and	and	CCONJ
ajlm-1122	61	12	previously	previously	ADV
ajlm-1122	61	13	described	describe	VERB
ajlm-1122	61	14	in	in	ADP
ajlm-1122	61	15	more	more	ADJ
ajlm-1122	61	16	detail	detail	NOUN
ajlm-1122	61	17	by	by	ADP
ajlm-1122	61	18	rossouw.12	rossouw.12	PROPN
ajlm-1122	61	19	mass	mass	PROPN
ajlm-1122	61	20	spectrometry	spectrometry	NOUN
ajlm-1122	61	21	analysis	analysis	NOUN
ajlm-1122	61	22	mass	mass	ADJ
ajlm-1122	61	23	spectrometry	spectrometry	NOUN
ajlm-1122	61	24	analysis	analysis	NOUN
ajlm-1122	61	25	of	of	ADP
ajlm-1122	61	26	each	each	DET
ajlm-1122	61	27	sample	sample	NOUN
ajlm-1122	61	28	’s	’s	PART
ajlm-1122	61	29	peptides	peptide	NOUN
ajlm-1122	61	30	was	be	AUX
ajlm-1122	61	31	performed	perform	VERB
ajlm-1122	61	32	using	use	VERB
ajlm-1122	61	33	the	the	DET
ajlm-1122	61	34	q	q	ADJ
ajlm-1122	61	35	-	-	PUNCT
ajlm-1122	61	36	exactive	exactive	ADJ
ajlm-1122	61	37	quadrupole	quadrupole	NOUN
ajlm-1122	61	38	-	-	PUNCT
ajlm-1122	61	39	orbitrap	orbitrap	NOUN
ajlm-1122	61	40	(	(	PUNCT
ajlm-1122	61	41	thermo	thermo	NOUN
ajlm-1122	61	42	fisher	fisher	PROPN
ajlm-1122	61	43	scientific	scientific	PROPN
ajlm-1122	61	44	,	,	PUNCT
ajlm-1122	61	45	waltham	waltham	PROPN
ajlm-1122	61	46	,	,	PUNCT
ajlm-1122	61	47	massachusetts	massachusetts	PROPN
ajlm-1122	61	48	,	,	PUNCT
ajlm-1122	61	49	united	united	PROPN
ajlm-1122	61	50	states	states	PROPN
ajlm-1122	61	51	)	)	PUNCT
ajlm-1122	61	52	,	,	PUNCT
ajlm-1122	61	53	which	which	PRON
ajlm-1122	61	54	was	be	AUX
ajlm-1122	61	55	coupled	couple	VERB
ajlm-1122	61	56	with	with	ADP
ajlm-1122	61	57	a	a	DET
ajlm-1122	61	58	dionex	dionex	ADV
ajlm-1122	61	59	ultimate	ultimate	ADJ
ajlm-1122	61	60	3000	3000	NUM
ajlm-1122	61	61	nano	nano	NOUN
ajlm-1122	61	62	-	-	PUNCT
ajlm-1122	61	63	uplc	uplc	ADJ
ajlm-1122	61	64	system	system	NOUN
ajlm-1122	61	65	as	as	SCONJ
ajlm-1122	61	66	described	describe	VERB
ajlm-1122	61	67	before	before	ADV
ajlm-1122	61	68	by	by	ADP
ajlm-1122	61	69	rossouw.12	rossouw.12	NOUN
ajlm-1122	61	70	using	use	VERB
ajlm-1122	61	71	xcaliburtm	xcaliburtm	PROPN
ajlm-1122	61	72	(	(	PUNCT
ajlm-1122	61	73	version	version	NOUN
ajlm-1122	61	74	4.2	4.2	NUM
ajlm-1122	61	75	)	)	PUNCT
ajlm-1122	61	76	(	(	PUNCT
ajlm-1122	61	77	thermo	thermo	NOUN
ajlm-1122	61	78	fisher	fisher	PROPN
ajlm-1122	61	79	,	,	PUNCT
ajlm-1122	61	80	waltham	waltham	PROPN
ajlm-1122	61	81	,	,	PUNCT
ajlm-1122	61	82	massachusetts	massachusetts	PROPN
ajlm-1122	61	83	,	,	PUNCT
ajlm-1122	61	84	united	united	PROPN
ajlm-1122	61	85	states	states	PROPN
ajlm-1122	61	86	)	)	PUNCT
ajlm-1122	61	87	,	,	PUNCT
ajlm-1122	61	88	spectral	spectral	ADJ
ajlm-1122	61	89	data	datum	NOUN
ajlm-1122	61	90	was	be	AUX
ajlm-1122	61	91	collected	collect	VERB
ajlm-1122	61	92	in	in	ADP
ajlm-1122	61	93	a	a	DET
ajlm-1122	61	94	data	data	NOUN
ajlm-1122	61	95	-	-	PUNCT
ajlm-1122	61	96	dependent	dependent	ADJ
ajlm-1122	61	97	manner	manner	NOUN
ajlm-1122	61	98	and	and	CCONJ
ajlm-1122	61	99	details	detail	NOUN
ajlm-1122	61	100	are	be	AUX
ajlm-1122	61	101	shown	show	VERB
ajlm-1122	61	102	in	in	ADP
ajlm-1122	61	103	supplementary	supplementary	ADJ
ajlm-1122	61	104	document	document	NOUN
ajlm-1122	61	105	–	–	PUNCT
ajlm-1122	61	106	table	table	NOUN
ajlm-1122	61	107	s1	s1	NOUN
ajlm-1122	61	108	.	.	PUNCT
ajlm-1122	62	1	identification	identification	NOUN
ajlm-1122	62	2	of	of	ADP
ajlm-1122	62	3	peptides	peptide	NOUN
ajlm-1122	62	4	and	and	CCONJ
ajlm-1122	62	5	proteins	protein	NOUN
ajlm-1122	62	6	the	the	DET
ajlm-1122	62	7	raw	raw	ADJ
ajlm-1122	62	8	spectral	spectral	ADJ
ajlm-1122	62	9	data	datum	NOUN
ajlm-1122	62	10	were	be	AUX
ajlm-1122	62	11	converted	convert	VERB
ajlm-1122	62	12	into	into	ADP
ajlm-1122	62	13	‘	'	PUNCT
ajlm-1122	62	14	mascot	mascot	ADJ
ajlm-1122	62	15	generic	generic	ADJ
ajlm-1122	62	16	format	format	NOUN
ajlm-1122	62	17	’	'	PUNCT
ajlm-1122	62	18	(	(	PUNCT
ajlm-1122	62	19	matrix	matrix	NOUN
ajlm-1122	62	20	science	science	NOUN
ajlm-1122	62	21	,	,	PUNCT
ajlm-1122	62	22	london	london	PROPN
ajlm-1122	62	23	,	,	PUNCT
ajlm-1122	62	24	united	united	ADJ
ajlm-1122	62	25	kingdom	kingdom	PROPN
ajlm-1122	62	26	)	)	PUNCT
ajlm-1122	62	27	,	,	PUNCT
ajlm-1122	62	28	which	which	PRON
ajlm-1122	62	29	is	be	AUX
ajlm-1122	62	30	a	a	DET
ajlm-1122	62	31	standard	standard	ADJ
ajlm-1122	62	32	format	format	NOUN
ajlm-1122	62	33	used	use	VERB
ajlm-1122	62	34	for	for	ADP
ajlm-1122	62	35	tandem	tandem	NOUN
ajlm-1122	62	36	ms	ms	PROPN
ajlm-1122	62	37	data	datum	NOUN
ajlm-1122	62	38	that	that	PRON
ajlm-1122	62	39	converts	convert	VERB
ajlm-1122	62	40	the	the	DET
ajlm-1122	62	41	raw	raw	ADJ
ajlm-1122	62	42	data	datum	NOUN
ajlm-1122	62	43	into	into	ADP
ajlm-1122	62	44	a	a	DET
ajlm-1122	62	45	simpler	simple	ADJ
ajlm-1122	62	46	format	format	NOUN
ajlm-1122	62	47	for	for	ADP
ajlm-1122	62	48	subsequent	subsequent	ADJ
ajlm-1122	62	49	database	database	NOUN
ajlm-1122	62	50	searches	search	NOUN
ajlm-1122	62	51	,	,	PUNCT
ajlm-1122	62	52	using	use	VERB
ajlm-1122	62	53	msconvert	msconvert	NOUN
ajlm-1122	62	54	(	(	PUNCT
ajlm-1122	62	55	proteowizard	proteowizard	PROPN
ajlm-1122	62	56	,	,	PUNCT
ajlm-1122	62	57	palo	palo	PROPN
ajlm-1122	62	58	alto	alto	PROPN
ajlm-1122	62	59	,	,	PUNCT
ajlm-1122	62	60	california	california	PROPN
ajlm-1122	62	61	,	,	PUNCT
ajlm-1122	62	62	united	united	PROPN
ajlm-1122	62	63	states).23	states).23	PROPN
ajlm-1122	62	64	x!tandem	x!tandem	PROPN
ajlm-1122	63	1	(	(	PUNCT
ajlm-1122	63	2	version	version	PROPN
ajlm-1122	63	3	2015.12.15.2)24	2015.12.15.2)24	PROPN
ajlm-1122	63	4	(	(	PUNCT
ajlm-1122	63	5	the	the	DET
ajlm-1122	63	6	global	global	ADJ
ajlm-1122	63	7	proteome	proteome	PROPN
ajlm-1122	63	8	machine	machine	NOUN
ajlm-1122	63	9	organization	organization	PROPN
ajlm-1122	63	10	,	,	PUNCT
ajlm-1122	63	11	winnipeg	winnipeg	PROPN
ajlm-1122	63	12	,	,	PUNCT
ajlm-1122	63	13	manitoba	manitoba	PROPN
ajlm-1122	63	14	,	,	PUNCT
ajlm-1122	63	15	canada	canada	PROPN
ajlm-1122	63	16	)	)	PUNCT
ajlm-1122	63	17	,	,	PUNCT
ajlm-1122	63	18	ms	ms	PROPN
ajlm-1122	63	19	amanda	amanda	PROPN
ajlm-1122	63	20	(	(	PUNCT
ajlm-1122	63	21	version	version	PROPN
ajlm-1122	63	22	2.0.0.9706)25	2.0.0.9706)25	PROPN
ajlm-1122	63	23	(	(	PUNCT
ajlm-1122	63	24	protein	protein	NOUN
ajlm-1122	63	25	chemistry	chemistry	NOUN
ajlm-1122	63	26	facility	facility	NOUN
ajlm-1122	63	27	imp	imp	PROPN
ajlm-1122	63	28	/	/	SYM
ajlm-1122	63	29	imba	imba	NOUN
ajlm-1122	63	30	/	/	SYM
ajlm-1122	63	31	gmi	gmi	PROPN
ajlm-1122	63	32	,	,	PUNCT
ajlm-1122	63	33	vienna	vienna	PROPN
ajlm-1122	63	34	,	,	PUNCT
ajlm-1122	63	35	austria	austria	PROPN
ajlm-1122	63	36	)	)	PUNCT
ajlm-1122	63	37	,	,	PUNCT
ajlm-1122	63	38	and	and	CCONJ
ajlm-1122	63	39	ms	ms	NOUN
ajlm-1122	63	40	-	-	PUNCT
ajlm-1122	63	41	gf+	gf+	ADJ
ajlm-1122	63	42	(	(	PUNCT
ajlm-1122	63	43	version	version	NOUN
ajlm-1122	63	44	2018.04.09)26	2018.04.09)26	NUM
ajlm-1122	63	45	(	(	PUNCT
ajlm-1122	63	46	pacific	pacific	PROPN
ajlm-1122	63	47	northwest	northwest	PROPN
ajlm-1122	63	48	national	national	PROPN
ajlm-1122	63	49	laboratory	laboratory	PROPN
ajlm-1122	63	50	,	,	PUNCT
ajlm-1122	63	51	richland	richland	PROPN
ajlm-1122	63	52	,	,	PUNCT
ajlm-1122	63	53	washington	washington	PROPN
ajlm-1122	63	54	,	,	PUNCT
ajlm-1122	63	55	united	united	PROPN
ajlm-1122	63	56	states	states	PROPN
ajlm-1122	63	57	)	)	PUNCT
ajlm-1122	63	58	were	be	AUX
ajlm-1122	63	59	used	use	VERB
ajlm-1122	63	60	to	to	PART
ajlm-1122	63	61	identify	identify	VERB
ajlm-1122	63	62	peak	peak	NOUN
ajlm-1122	63	63	lists	list	NOUN
ajlm-1122	63	64	from	from	ADP
ajlm-1122	63	65	ms	ms	PROPN
ajlm-1122	63	66	/	/	SYM
ajlm-1122	63	67	ms	ms	PROPN
ajlm-1122	63	68	spectra.12	spectra.12	PROPN
ajlm-1122	63	69	searchgui	searchgui	PROPN
ajlm-1122	63	70	(	(	PUNCT
ajlm-1122	63	71	version	version	NOUN
ajlm-1122	63	72	3.3.3)27	3.3.3)27	NUM
ajlm-1122	63	73	(	(	PUNCT
ajlm-1122	63	74	computational	computational	ADJ
ajlm-1122	63	75	omics	omic	NOUN
ajlm-1122	63	76	and	and	CCONJ
ajlm-1122	63	77	systems	system	NOUN
ajlm-1122	63	78	biology	biology	NOUN
ajlm-1122	63	79	group	group	NOUN
ajlm-1122	63	80	,	,	PUNCT
ajlm-1122	63	81	ghent	ghent	PROPN
ajlm-1122	63	82	university	university	PROPN
ajlm-1122	63	83	,	,	PUNCT
ajlm-1122	63	84	gent	gent	NOUN
ajlm-1122	63	85	-	-	PUNCT
ajlm-1122	63	86	zwijnaarde	zwijnaarde	PROPN
ajlm-1122	63	87	,	,	PUNCT
ajlm-1122	63	88	belgium	belgium	NOUN
ajlm-1122	63	89	)	)	PUNCT
ajlm-1122	63	90	was	be	AUX
ajlm-1122	63	91	used	use	VERB
ajlm-1122	63	92	to	to	PART
ajlm-1122	63	93	allow	allow	VERB
ajlm-1122	63	94	for	for	ADP
ajlm-1122	63	95	simultaneous	simultaneous	ADJ
ajlm-1122	63	96	searches	search	NOUN
ajlm-1122	63	97	.	.	PUNCT
ajlm-1122	64	1	a	a	DET
ajlm-1122	64	2	concatenated	concatenate	VERB
ajlm-1122	64	3	target	target	NOUN
ajlm-1122	64	4	-	-	PUNCT
ajlm-1122	64	5	decoy28	decoy28	NOUN
ajlm-1122	64	6	version	version	NOUN
ajlm-1122	64	7	of	of	ADP
ajlm-1122	64	8	the	the	DET
ajlm-1122	64	9	homo	homo	NOUN
ajlm-1122	64	10	sapiens	sapien	VERB
ajlm-1122	64	11	(	(	PUNCT
ajlm-1122	64	12	73101	73101	NUM
ajlm-1122	64	13	,	,	PUNCT
ajlm-1122	64	14	>	>	X
ajlm-1122	64	15	99.9	99.9	NUM
ajlm-1122	64	16	%	%	NOUN
ajlm-1122	64	17	)	)	PUNCT
ajlm-1122	64	18	,	,	PUNCT
ajlm-1122	64	19	sus	sus	PROPN
ajlm-1122	64	20	scrofa	scrofa	NOUN
ajlm-1122	64	21	(	(	PUNCT
ajlm-1122	64	22	1	1	NUM
ajlm-1122	64	23	,	,	PUNCT
ajlm-1122	64	24	<	<	X
ajlm-1122	64	25	0.1	0.1	NUM
ajlm-1122	64	26	%	%	NOUN
ajlm-1122	64	27	)	)	PUNCT
ajlm-1122	64	28	complement	complement	NOUN
ajlm-1122	64	29	of	of	ADP
ajlm-1122	64	30	the	the	DET
ajlm-1122	64	31	uniprotkb29	uniprotkb29	ADJ
ajlm-1122	64	32	reference	reference	NOUN
ajlm-1122	64	33	proteome	proteome	NOUN
ajlm-1122	64	34	(	(	PUNCT
ajlm-1122	64	35	up000005640	up000005640	ADJ
ajlm-1122	64	36	;	;	PUNCT
ajlm-1122	64	37	9606	9606	NUM
ajlm-1122	64	38	-	-	PUNCT
ajlm-1122	64	39	homo	homo	NOUN
ajlm-1122	64	40	sapiens	sapiens	PROPN
ajlm-1122	64	41	)	)	PUNCT
ajlm-1122	64	42	(	(	PUNCT
ajlm-1122	64	43	version	version	NOUN
ajlm-1122	64	44	downloaded	download	VERB
ajlm-1122	64	45	on	on	ADP
ajlm-1122	64	46	29/10/2018	29/10/2018	NOUN
ajlm-1122	64	47	)	)	PUNCT
ajlm-1122	64	48	was	be	AUX
ajlm-1122	64	49	used	use	VERB
ajlm-1122	64	50	for	for	ADP
ajlm-1122	64	51	protein	protein	NOUN
ajlm-1122	64	52	identifications	identification	NOUN
ajlm-1122	64	53	.	.	PUNCT
ajlm-1122	65	1	searchgui	searchgui	PROPN
ajlm-1122	65	2	generated	generate	VERB
ajlm-1122	65	3	the	the	DET
ajlm-1122	65	4	decoy	decoy	NOUN
ajlm-1122	65	5	sequences	sequence	NOUN
ajlm-1122	65	6	.	.	PUNCT
ajlm-1122	66	1	the	the	DET
ajlm-1122	66	2	identification	identification	NOUN
ajlm-1122	66	3	settings	setting	NOUN
ajlm-1122	66	4	are	be	AUX
ajlm-1122	66	5	shown	show	VERB
ajlm-1122	66	6	in	in	ADP
ajlm-1122	66	7	table	table	NOUN
ajlm-1122	66	8	2	2	NUM
ajlm-1122	66	9	and	and	CCONJ
ajlm-1122	66	10	the	the	DET
ajlm-1122	66	11	certificate	certificate	NOUN
ajlm-1122	66	12	of	of	ADP
ajlm-1122	66	13	analysis	analysis	NOUN
ajlm-1122	66	14	lists	list	NOUN
ajlm-1122	66	15	all	all	DET
ajlm-1122	66	16	algorithms	algorithms	NOUN
ajlm-1122	66	17	settings	setting	NOUN
ajlm-1122	66	18	used	use	VERB
ajlm-1122	66	19	and	and	CCONJ
ajlm-1122	66	20	validation	validation	NOUN
ajlm-1122	66	21	thresholds	threshold	NOUN
ajlm-1122	66	22	(	(	PUNCT
ajlm-1122	66	23	supplementary	supplementary	ADJ
ajlm-1122	66	24	document	document	NOUN
ajlm-1122	66	25	3	3	NUM
ajlm-1122	66	26	–	–	PUNCT
ajlm-1122	66	27	file	file	NOUN
ajlm-1122	66	28	s1	s1	NOUN
ajlm-1122	66	29	)	)	PUNCT
ajlm-1122	66	30	.	.	PUNCT
ajlm-1122	67	1	peptideshaker	peptideshaker	NOUN
ajlm-1122	67	2	(	(	PUNCT
ajlm-1122	67	3	version	version	NOUN
ajlm-1122	67	4	1.16.31)30	1.16.31)30	NUM
ajlm-1122	67	5	(	(	PUNCT
ajlm-1122	67	6	computational	computational	ADJ
ajlm-1122	67	7	omics	omic	NOUN
ajlm-1122	67	8	and	and	CCONJ
ajlm-1122	67	9	systems	system	NOUN
ajlm-1122	67	10	biology	biology	NOUN
ajlm-1122	67	11	group	group	NOUN
ajlm-1122	67	12	,	,	PUNCT
ajlm-1122	67	13	ghent	ghent	PROPN
ajlm-1122	67	14	university	university	PROPN
ajlm-1122	67	15	,	,	PUNCT
ajlm-1122	67	16	gent	gent	NOUN
ajlm-1122	67	17	-	-	PUNCT
ajlm-1122	67	18	zwijnaarde	zwijnaarde	PROPN
ajlm-1122	67	19	,	,	PUNCT
ajlm-1122	67	20	belgium	belgium	NOUN
ajlm-1122	67	21	)	)	PUNCT
ajlm-1122	67	22	was	be	AUX
ajlm-1122	67	23	used	use	VERB
ajlm-1122	67	24	to	to	PART
ajlm-1122	67	25	infer	infer	VERB
ajlm-1122	67	26	peptide	peptide	NOUN
ajlm-1122	67	27	and	and	CCONJ
ajlm-1122	67	28	protein	protein	NOUN
ajlm-1122	67	29	identifications	identification	NOUN
ajlm-1122	67	30	from	from	ADP
ajlm-1122	67	31	spectrum	spectrum	NOUN
ajlm-1122	67	32	identification	identification	NOUN
ajlm-1122	67	33	data	datum	NOUN
ajlm-1122	67	34	and	and	CCONJ
ajlm-1122	67	35	validated	validate	VERB
ajlm-1122	67	36	at	at	ADP
ajlm-1122	67	37	1	1	NUM
ajlm-1122	67	38	%	%	NOUN
ajlm-1122	67	39	false	false	ADJ
ajlm-1122	67	40	discovery	discovery	NOUN
ajlm-1122	67	41	rate	rate	NOUN
ajlm-1122	67	42	estimated	estimate	VERB
ajlm-1122	67	43	using	use	VERB
ajlm-1122	67	44	the	the	DET
ajlm-1122	67	45	decoy	decoy	NOUN
ajlm-1122	67	46	hit	hit	VERB
ajlm-1122	67	47	distribution	distribution	NOUN
ajlm-1122	67	48	.	.	PUNCT
ajlm-1122	68	1	d	d	X
ajlm-1122	68	2	-	-	PUNCT
ajlm-1122	68	3	score31	score31	NOUN
ajlm-1122	68	4	and	and	CCONJ
ajlm-1122	68	5	phosphors	phosphor	NOUN
ajlm-1122	68	6	score32	score32	NOUN
ajlm-1122	68	7	(	(	PUNCT
ajlm-1122	68	8	threshold	threshold	NOUN
ajlm-1122	68	9	of	of	ADP
ajlm-1122	68	10	95.0	95.0	NUM
ajlm-1122	68	11	as	as	SCONJ
ajlm-1122	68	12	implemented	implement	VERB
ajlm-1122	68	13	in	in	ADP
ajlm-1122	68	14	the	the	DET
ajlm-1122	68	15	compomics	compomics	PROPN
ajlm-1122	68	16	utilities	utility	NOUN
ajlm-1122	68	17	package33	package33	NOUN
ajlm-1122	68	18	)	)	PUNCT
ajlm-1122	68	19	were	be	AUX
ajlm-1122	68	20	used	use	VERB
ajlm-1122	68	21	to	to	PART
ajlm-1122	68	22	score	score	VERB
ajlm-1122	68	23	post	post	ADJ
ajlm-1122	68	24	-	-	ADJ
ajlm-1122	68	25	translational	translational	ADJ
ajlm-1122	68	26	modification	modification	NOUN
ajlm-1122	68	27	localisations	localisation	NOUN
ajlm-1122	68	28	.	.	PUNCT
ajlm-1122	69	1	adequate	adequate	ADJ
ajlm-1122	69	2	or	or	CCONJ
ajlm-1122	69	3	acceptable	acceptable	ADJ
ajlm-1122	69	4	reproducibility	reproducibility	NOUN
ajlm-1122	69	5	or	or	CCONJ
ajlm-1122	69	6	reliability	reliability	NOUN
ajlm-1122	69	7	,	,	PUNCT
ajlm-1122	69	8	as	as	SCONJ
ajlm-1122	69	9	it	it	PRON
ajlm-1122	69	10	pertains	pertain	VERB
ajlm-1122	69	11	to	to	ADP
ajlm-1122	69	12	the	the	DET
ajlm-1122	69	13	results	result	NOUN
ajlm-1122	69	14	(	(	PUNCT
ajlm-1122	69	15	including	include	VERB
ajlm-1122	69	16	figure	figure	NOUN
ajlm-1122	69	17	3a	3a	NUM
ajlm-1122	69	18	and	and	CCONJ
ajlm-1122	69	19	3c	3c	NUM
ajlm-1122	69	20	)	)	PUNCT
ajlm-1122	69	21	,	,	PUNCT
ajlm-1122	69	22	was	be	AUX
ajlm-1122	69	23	defined	define	VERB
ajlm-1122	69	24	as	as	ADP
ajlm-1122	69	25	the	the	DET
ajlm-1122	69	26	observable	observable	ADJ
ajlm-1122	69	27	extent	extent	NOUN
ajlm-1122	69	28	(	(	PUNCT
ajlm-1122	69	29	measured	measure	VERB
ajlm-1122	69	30	,	,	PUNCT
ajlm-1122	69	31	for	for	ADP
ajlm-1122	69	32	example	example	NOUN
ajlm-1122	69	33	,	,	PUNCT
ajlm-1122	69	34	as	as	ADP
ajlm-1122	69	35	the	the	DET
ajlm-1122	69	36	standard	standard	ADJ
ajlm-1122	69	37	deviation	deviation	NOUN
ajlm-1122	69	38	)	)	PUNCT
ajlm-1122	69	39	of	of	ADP
ajlm-1122	69	40	stability	stability	NOUN
ajlm-1122	69	41	within	within	ADP
ajlm-1122	69	42	measured	measured	ADJ
ajlm-1122	69	43	data	datum	NOUN
ajlm-1122	69	44	points	point	NOUN
ajlm-1122	69	45	when	when	SCONJ
ajlm-1122	69	46	measurements	measurement	NOUN
ajlm-1122	69	47	are	be	AUX
ajlm-1122	69	48	repeated	repeat	VERB
ajlm-1122	69	49	under	under	ADP
ajlm-1122	69	50	similar	similar	ADJ
ajlm-1122	69	51	experimental	experimental	ADJ
ajlm-1122	69	52	conditions	condition	NOUN
ajlm-1122	69	53	.	.	PUNCT
ajlm-1122	70	1	figure	figure	VERB
ajlm-1122	70	2	3	3	NUM
ajlm-1122	70	3	:	:	PUNCT
ajlm-1122	70	4	numbers	number	NOUN
ajlm-1122	70	5	of	of	ADP
ajlm-1122	70	6	identified	identify	VERB
ajlm-1122	70	7	peptides	peptide	NOUN
ajlm-1122	70	8	and	and	CCONJ
ajlm-1122	70	9	proteins	protein	NOUN
ajlm-1122	70	10	from	from	ADP
ajlm-1122	70	11	wcpls	wcpls	NOUN
ajlm-1122	70	12	and	and	CCONJ
ajlm-1122	70	13	pellets	pellet	NOUN
ajlm-1122	70	14	,	,	PUNCT
ajlm-1122	70	15	compared	compare	VERB
ajlm-1122	70	16	between	between	ADP
ajlm-1122	70	17	different	different	ADJ
ajlm-1122	70	18	protein	protein	NOUN
ajlm-1122	70	19	extraction	extraction	NOUN
ajlm-1122	70	20	buffers	buffer	NOUN
ajlm-1122	70	21	with	with	ADP
ajlm-1122	70	22	or	or	CCONJ
ajlm-1122	70	23	without	without	ADP
ajlm-1122	70	24	addition	addition	NOUN
ajlm-1122	70	25	of	of	ADP
ajlm-1122	70	26	peg	peg	NOUN
ajlm-1122	70	27	at	at	ADP
ajlm-1122	70	28	the	the	DET
ajlm-1122	70	29	south	south	ADJ
ajlm-1122	70	30	african	african	ADJ
ajlm-1122	70	31	national	national	PROPN
ajlm-1122	70	32	bioinformatics	bioinformatics	PROPN
ajlm-1122	70	33	institute	institute	PROPN
ajlm-1122	70	34	,	,	PUNCT
ajlm-1122	70	35	university	university	NOUN
ajlm-1122	70	36	of	of	ADP
ajlm-1122	70	37	the	the	DET
ajlm-1122	70	38	western	western	ADJ
ajlm-1122	70	39	cape	cape	NOUN
ajlm-1122	70	40	,	,	PUNCT
ajlm-1122	70	41	bellville	bellville	PROPN
ajlm-1122	70	42	,	,	PUNCT
ajlm-1122	70	43	south	south	PROPN
ajlm-1122	70	44	africa	africa	PROPN
ajlm-1122	70	45	,	,	PUNCT
ajlm-1122	70	46	from	from	ADP
ajlm-1122	70	47	august	august	PROPN
ajlm-1122	70	48	2017	2017	NUM
ajlm-1122	70	49	to	to	ADP
ajlm-1122	70	50	july	july	PROPN
ajlm-1122	70	51	2019	2019	NUM
ajlm-1122	70	52	.	.	PUNCT
ajlm-1122	71	1	(	(	PUNCT
ajlm-1122	71	2	a	a	X
ajlm-1122	71	3	)	)	PUNCT
ajlm-1122	71	4	box	box	NOUN
ajlm-1122	71	5	and	and	CCONJ
ajlm-1122	71	6	whiskers	whisker	NOUN
ajlm-1122	71	7	plot	plot	VERB
ajlm-1122	71	8	showing	show	VERB
ajlm-1122	71	9	the	the	DET
ajlm-1122	71	10	number	number	NOUN
ajlm-1122	71	11	of	of	ADP
ajlm-1122	71	12	peptides	peptide	NOUN
ajlm-1122	71	13	identified	identify	VERB
ajlm-1122	71	14	(	(	PUNCT
ajlm-1122	71	15	for	for	ADP
ajlm-1122	71	16	all	all	DET
ajlm-1122	71	17	three	three	NUM
ajlm-1122	71	18	patient	patient	ADJ
ajlm-1122	71	19	samples	sample	NOUN
ajlm-1122	71	20	)	)	PUNCT
ajlm-1122	71	21	per	per	ADP
ajlm-1122	71	22	condition	condition	NOUN
ajlm-1122	71	23	–	–	PUNCT
ajlm-1122	71	24	pellet	pellet	NOUN
ajlm-1122	71	25	with	with	ADP
ajlm-1122	71	26	peg	peg	NOUN
ajlm-1122	71	27	(	(	PUNCT
ajlm-1122	71	28	4	4	NUM
ajlm-1122	71	29	%	%	NOUN
ajlm-1122	71	30	sds	sds	NOUN
ajlm-1122	71	31	)	)	PUNCT
ajlm-1122	71	32	,	,	PUNCT
ajlm-1122	71	33	pellet	pellet	NOUN
ajlm-1122	71	34	without	without	ADP
ajlm-1122	71	35	peg	peg	NOUN
ajlm-1122	71	36	(	(	PUNCT
ajlm-1122	71	37	4	4	NUM
ajlm-1122	71	38	%	%	NOUN
ajlm-1122	71	39	sds	sds	NOUN
ajlm-1122	71	40	)	)	PUNCT
ajlm-1122	71	41	,	,	PUNCT
ajlm-1122	71	42	wcpl	wcpl	NOUN
ajlm-1122	71	43	with	with	ADP
ajlm-1122	71	44	peg	peg	NOUN
ajlm-1122	71	45	(	(	PUNCT
ajlm-1122	71	46	2	2	NUM
ajlm-1122	71	47	%	%	NOUN
ajlm-1122	71	48	sds	sds	NOUN
ajlm-1122	71	49	)	)	PUNCT
ajlm-1122	71	50	,	,	PUNCT
ajlm-1122	71	51	wcpl	wcpl	NOUN
ajlm-1122	71	52	without	without	ADP
ajlm-1122	71	53	peg	peg	NOUN
ajlm-1122	71	54	(	(	PUNCT
ajlm-1122	71	55	2	2	NUM
ajlm-1122	71	56	%	%	NOUN
ajlm-1122	71	57	sds	sds	NOUN
ajlm-1122	71	58	)	)	PUNCT
ajlm-1122	71	59	.	.	PUNCT
ajlm-1122	72	1	(	(	PUNCT
ajlm-1122	72	2	b	b	X
ajlm-1122	72	3	)	)	PUNCT
ajlm-1122	72	4	venn	venn	PROPN
ajlm-1122	72	5	diagram	diagram	PROPN
ajlm-1122	72	6	depicting	depict	VERB
ajlm-1122	72	7	the	the	DET
ajlm-1122	72	8	distribution	distribution	NOUN
ajlm-1122	72	9	of	of	ADP
ajlm-1122	72	10	identified	identify	VERB
ajlm-1122	72	11	peptides	peptide	NOUN
ajlm-1122	72	12	(	(	PUNCT
ajlm-1122	72	13	for	for	ADP
ajlm-1122	72	14	all	all	DET
ajlm-1122	72	15	three	three	NUM
ajlm-1122	72	16	patient	patient	ADJ
ajlm-1122	72	17	cases	case	NOUN
ajlm-1122	72	18	)	)	PUNCT
ajlm-1122	72	19	among	among	ADP
ajlm-1122	72	20	all	all	DET
ajlm-1122	72	21	conditions	condition	NOUN
ajlm-1122	72	22	.	.	PUNCT
ajlm-1122	73	1	(	(	PUNCT
ajlm-1122	73	2	c	c	X
ajlm-1122	73	3	)	)	PUNCT
ajlm-1122	73	4	box	box	NOUN
ajlm-1122	73	5	and	and	CCONJ
ajlm-1122	73	6	whiskers	whisker	NOUN
ajlm-1122	73	7	plot	plot	VERB
ajlm-1122	73	8	showing	show	VERB
ajlm-1122	73	9	the	the	DET
ajlm-1122	73	10	number	number	NOUN
ajlm-1122	73	11	of	of	ADP
ajlm-1122	73	12	proteins	protein	NOUN
ajlm-1122	73	13	identified	identify	VERB
ajlm-1122	73	14	(	(	PUNCT
ajlm-1122	73	15	for	for	ADP
ajlm-1122	73	16	all	all	DET
ajlm-1122	73	17	three	three	NUM
ajlm-1122	73	18	patient	patient	ADJ
ajlm-1122	73	19	samples	sample	NOUN
ajlm-1122	73	20	)	)	PUNCT
ajlm-1122	73	21	per	per	ADP
ajlm-1122	73	22	condition	condition	NOUN
ajlm-1122	73	23	.	.	PUNCT
ajlm-1122	74	1	(	(	PUNCT
ajlm-1122	74	2	d	d	X
ajlm-1122	74	3	)	)	PUNCT
ajlm-1122	74	4	venn	venn	PROPN
ajlm-1122	74	5	diagram	diagram	PROPN
ajlm-1122	74	6	depicting	depict	VERB
ajlm-1122	74	7	the	the	DET
ajlm-1122	74	8	distribution	distribution	NOUN
ajlm-1122	74	9	of	of	ADP
ajlm-1122	74	10	identified	identify	VERB
ajlm-1122	74	11	proteins	protein	NOUN
ajlm-1122	74	12	(	(	PUNCT
ajlm-1122	74	13	individual	individual	ADJ
ajlm-1122	74	14	and	and	CCONJ
ajlm-1122	74	15	protein	protein	NOUN
ajlm-1122	74	16	groups	group	NOUN
ajlm-1122	74	17	)	)	PUNCT
ajlm-1122	74	18	(	(	PUNCT
ajlm-1122	74	19	for	for	ADP
ajlm-1122	74	20	all	all	DET
ajlm-1122	74	21	three	three	NUM
ajlm-1122	74	22	patient	patient	ADJ
ajlm-1122	74	23	cases	case	NOUN
ajlm-1122	74	24	)	)	PUNCT
ajlm-1122	74	25	among	among	ADP
ajlm-1122	74	26	all	all	DET
ajlm-1122	74	27	conditions	condition	NOUN
ajlm-1122	74	28	.	.	PUNCT
ajlm-1122	75	1	(	(	PUNCT
ajlm-1122	75	2	–	–	PUNCT
ajlm-1122	75	3	peg	peg	NOUN
ajlm-1122	75	4	)	)	PUNCT
ajlm-1122	75	5	refers	refer	VERB
ajlm-1122	75	6	to	to	ADP
ajlm-1122	75	7	protein	protein	NOUN
ajlm-1122	75	8	extracted	extract	VERB
ajlm-1122	75	9	without	without	ADP
ajlm-1122	75	10	peg	peg	NOUN
ajlm-1122	75	11	and	and	CCONJ
ajlm-1122	75	12	(	(	PUNCT
ajlm-1122	75	13	+	+	NOUN
ajlm-1122	75	14	peg	peg	NOUN
ajlm-1122	75	15	)	)	PUNCT
ajlm-1122	75	16	refers	refer	VERB
ajlm-1122	75	17	to	to	ADP
ajlm-1122	75	18	protein	protein	NOUN
ajlm-1122	75	19	extracted	extract	VERB
ajlm-1122	75	20	with	with	ADP
ajlm-1122	75	21	peg	peg	NOUN
ajlm-1122	75	22	.	.	PUNCT
ajlm-1122	76	1	red	red	ADJ
ajlm-1122	76	2	boxplots	boxplot	NOUN
ajlm-1122	76	3	refer	refer	VERB
ajlm-1122	76	4	to	to	PART
ajlm-1122	76	5	pellet	pellet	NOUN
ajlm-1122	76	6	samples	sample	NOUN
ajlm-1122	76	7	extracted	extract	VERB
ajlm-1122	76	8	with	with	ADP
ajlm-1122	76	9	peg	peg	NOUN
ajlm-1122	76	10	;	;	PUNCT
ajlm-1122	76	11	purple	purple	ADJ
ajlm-1122	76	12	boxplots	boxplot	NOUN
ajlm-1122	76	13	refer	refer	VERB
ajlm-1122	76	14	to	to	PART
ajlm-1122	76	15	pellet	pellet	NOUN
ajlm-1122	76	16	samples	sample	NOUN
ajlm-1122	76	17	extracted	extract	VERB
ajlm-1122	76	18	without	without	ADP
ajlm-1122	76	19	peg	peg	NOUN
ajlm-1122	76	20	;	;	PUNCT
ajlm-1122	76	21	blue	blue	ADJ
ajlm-1122	76	22	boxplots	boxplot	NOUN
ajlm-1122	76	23	refer	refer	VERB
ajlm-1122	76	24	to	to	AUX
ajlm-1122	76	25	wcpl	wcpl	VERB
ajlm-1122	76	26	samples	sample	NOUN
ajlm-1122	76	27	extracted	extract	VERB
ajlm-1122	76	28	with	with	ADP
ajlm-1122	76	29	peg	peg	NOUN
ajlm-1122	76	30	;	;	PUNCT
ajlm-1122	76	31	green	green	ADJ
ajlm-1122	76	32	boxplots	boxplot	NOUN
ajlm-1122	76	33	refer	refer	VERB
ajlm-1122	76	34	to	to	AUX
ajlm-1122	76	35	wcpl	wcpl	VERB
ajlm-1122	76	36	samples	sample	NOUN
ajlm-1122	76	37	extracted	extract	VERB
ajlm-1122	76	38	without	without	ADP
ajlm-1122	76	39	peg	peg	NOUN
ajlm-1122	76	40	.	.	PUNCT
ajlm-1122	77	1	table	table	NOUN
ajlm-1122	77	2	2	2	NUM
ajlm-1122	77	3	:	:	PUNCT
ajlm-1122	77	4	 	 	SPACE
ajlm-1122	77	5	peptide	peptide	NOUN
ajlm-1122	77	6	and	and	CCONJ
ajlm-1122	77	7	protein	protein	NOUN
ajlm-1122	77	8	identification	identification	NOUN
ajlm-1122	77	9	settings	setting	NOUN
ajlm-1122	77	10	at	at	ADP
ajlm-1122	77	11	the	the	DET
ajlm-1122	77	12	south	south	ADJ
ajlm-1122	77	13	african	african	ADJ
ajlm-1122	77	14	national	national	PROPN
ajlm-1122	77	15	bioinformatics	bioinformatics	PROPN
ajlm-1122	77	16	institute	institute	PROPN
ajlm-1122	77	17	,	,	PUNCT
ajlm-1122	77	18	university	university	NOUN
ajlm-1122	77	19	of	of	ADP
ajlm-1122	77	20	the	the	DET
ajlm-1122	77	21	western	western	ADJ
ajlm-1122	77	22	cape	cape	NOUN
ajlm-1122	77	23	,	,	PUNCT
ajlm-1122	77	24	bellville	bellville	PROPN
ajlm-1122	77	25	,	,	PUNCT
ajlm-1122	77	26	south	south	PROPN
ajlm-1122	77	27	africa	africa	PROPN
ajlm-1122	77	28	,	,	PUNCT
ajlm-1122	77	29	from	from	ADP
ajlm-1122	77	30	august	august	PROPN
ajlm-1122	77	31	2017	2017	NUM
ajlm-1122	77	32	to	to	ADP
ajlm-1122	77	33	july	july	PROPN
ajlm-1122	77	34	2019	2019	NUM
ajlm-1122	77	35	.	.	PUNCT
ajlm-1122	78	1	data	datum	NOUN
ajlm-1122	78	2	analysis	analysis	NOUN
ajlm-1122	78	3	data	datum	NOUN
ajlm-1122	78	4	were	be	AUX
ajlm-1122	78	5	analysed	analyse	VERB
ajlm-1122	78	6	and	and	CCONJ
ajlm-1122	78	7	graphically	graphically	ADV
ajlm-1122	78	8	visualised	visualise	VERB
ajlm-1122	78	9	and	and	CCONJ
ajlm-1122	78	10	displayed	display	VERB
ajlm-1122	78	11	using	use	VERB
ajlm-1122	78	12	pandas	panda	NOUN
ajlm-1122	78	13	,	,	PUNCT
ajlm-1122	78	14	numpy	numpy	NOUN
ajlm-1122	78	15	and	and	CCONJ
ajlm-1122	78	16	matplotlib	matplotlib	PROPN
ajlm-1122	78	17	python	python	PROPN
ajlm-1122	78	18	packages	package	NOUN
ajlm-1122	78	19	(	(	PUNCT
ajlm-1122	78	20	python	python	PROPN
ajlm-1122	78	21	software	software	PROPN
ajlm-1122	78	22	foundation	foundation	PROPN
ajlm-1122	78	23	,	,	PUNCT
ajlm-1122	78	24	wilmington	wilmington	PROPN
ajlm-1122	78	25	,	,	PUNCT
ajlm-1122	78	26	delaware	delaware	PROPN
ajlm-1122	78	27	,	,	PUNCT
ajlm-1122	78	28	united	united	PROPN
ajlm-1122	78	29	states	states	PROPN
ajlm-1122	78	30	)	)	PUNCT
ajlm-1122	78	31	,	,	PUNCT
ajlm-1122	78	32	as	as	ADV
ajlm-1122	78	33	well	well	ADV
ajlm-1122	78	34	as	as	ADP
ajlm-1122	78	35	microsoft	microsoft	PROPN
ajlm-1122	78	36	excel	excel	PROPN
ajlm-1122	78	37	(	(	PUNCT
ajlm-1122	78	38	microsoft	microsoft	PROPN
ajlm-1122	78	39	corporation	corporation	PROPN
ajlm-1122	78	40	,	,	PUNCT
ajlm-1122	78	41	redmond	redmond	PROPN
ajlm-1122	78	42	,	,	PUNCT
ajlm-1122	78	43	washington	washington	PROPN
ajlm-1122	78	44	,	,	PUNCT
ajlm-1122	78	45	united	united	PROPN
ajlm-1122	78	46	states	states	PROPN
ajlm-1122	78	47	)	)	PUNCT
ajlm-1122	78	48	.	.	PUNCT
ajlm-1122	79	1	the	the	DET
ajlm-1122	79	2	merged	merge	VERB
ajlm-1122	79	3	lists	list	NOUN
ajlm-1122	79	4	of	of	ADP
ajlm-1122	79	5	either	either	CCONJ
ajlm-1122	79	6	peptide	peptide	ADJ
ajlm-1122	79	7	sequences	sequence	NOUN
ajlm-1122	79	8	or	or	CCONJ
ajlm-1122	79	9	protein	protein	NOUN
ajlm-1122	79	10	accession	accession	NOUN
ajlm-1122	79	11	numbers	number	NOUN
ajlm-1122	79	12	(	(	PUNCT
ajlm-1122	79	13	individual	individual	ADJ
ajlm-1122	79	14	as	as	ADV
ajlm-1122	79	15	well	well	ADV
ajlm-1122	79	16	as	as	ADP
ajlm-1122	79	17	protein	protein	NOUN
ajlm-1122	79	18	groups	group	NOUN
ajlm-1122	79	19	)	)	PUNCT
ajlm-1122	79	20	identified	identify	VERB
ajlm-1122	79	21	in	in	ADP
ajlm-1122	79	22	each	each	DET
ajlm-1122	79	23	sample	sample	NOUN
ajlm-1122	79	24	group	group	NOUN
ajlm-1122	79	25	and	and	CCONJ
ajlm-1122	79	26	experimental	experimental	ADJ
ajlm-1122	79	27	condition	condition	NOUN
ajlm-1122	79	28	were	be	AUX
ajlm-1122	79	29	processed	process	VERB
ajlm-1122	79	30	using	use	VERB
ajlm-1122	79	31	venny	venny	NOUN
ajlm-1122	79	32	(	(	PUNCT
ajlm-1122	79	33	version	version	NOUN
ajlm-1122	79	34	2.1.0)34	2.1.0)34	NUM
ajlm-1122	79	35	(	(	PUNCT
ajlm-1122	79	36	bioinfogp	bioinfogp	NOUN
ajlm-1122	79	37	service	service	NOUN
ajlm-1122	79	38	,	,	PUNCT
ajlm-1122	79	39	universidad	universidad	PROPN
ajlm-1122	79	40	autónoma	autónoma	PROPN
ajlm-1122	79	41	de	de	PROPN
ajlm-1122	79	42	madrid	madrid	PROPN
ajlm-1122	79	43	,	,	PUNCT
ajlm-1122	79	44	madrid	madrid	PROPN
ajlm-1122	79	45	,	,	PUNCT
ajlm-1122	79	46	spain	spain	PROPN
ajlm-1122	79	47	)	)	PUNCT
ajlm-1122	79	48	,	,	PUNCT
ajlm-1122	79	49	which	which	PRON
ajlm-1122	79	50	calculated	calculate	VERB
ajlm-1122	79	51	and	and	CCONJ
ajlm-1122	79	52	visually	visually	ADV
ajlm-1122	79	53	displayed	display	VERB
ajlm-1122	79	54	the	the	DET
ajlm-1122	79	55	percentage	percentage	NOUN
ajlm-1122	79	56	overlap	overlap	NOUN
ajlm-1122	79	57	.	.	PUNCT
ajlm-1122	80	1	to	to	PART
ajlm-1122	80	2	determine	determine	VERB
ajlm-1122	80	3	the	the	DET
ajlm-1122	80	4	qualitative	qualitative	ADJ
ajlm-1122	80	5	reproducibility	reproducibility	NOUN
ajlm-1122	80	6	of	of	ADP
ajlm-1122	80	7	each	each	DET
ajlm-1122	80	8	experimental	experimental	ADJ
ajlm-1122	80	9	condition	condition	NOUN
ajlm-1122	80	10	,	,	PUNCT
ajlm-1122	80	11	the	the	DET
ajlm-1122	80	12	peptide	peptide	NOUN
ajlm-1122	80	13	identification	identification	NOUN
ajlm-1122	80	14	overlap	overlap	NOUN
ajlm-1122	80	15	(	(	PUNCT
ajlm-1122	80	16	supplementary	supplementary	ADJ
ajlm-1122	80	17	document	document	NOUN
ajlm-1122	80	18	–	–	PUNCT
ajlm-1122	80	19	figure	figure	NOUN
ajlm-1122	80	20	s1	s1	NOUN
ajlm-1122	80	21	)	)	PUNCT
ajlm-1122	80	22	was	be	AUX
ajlm-1122	80	23	computed	compute	VERB
ajlm-1122	80	24	using	use	VERB
ajlm-1122	80	25	the	the	DET
ajlm-1122	80	26	peptide	peptide	NOUN
ajlm-1122	80	27	sequences	sequence	NOUN
ajlm-1122	80	28	identified	identify	VERB
ajlm-1122	80	29	for	for	ADP
ajlm-1122	80	30	each	each	DET
ajlm-1122	80	31	sample	sample	NOUN
ajlm-1122	80	32	from	from	ADP
ajlm-1122	80	33	the	the	DET
ajlm-1122	80	34	data	data	NOUN
ajlm-1122	80	35	set	set	NOUN
ajlm-1122	80	36	(	(	PUNCT
ajlm-1122	80	37	regardless	regardless	ADV
ajlm-1122	80	38	of	of	ADP
ajlm-1122	80	39	peptide	peptide	ADJ
ajlm-1122	80	40	abundance	abundance	NOUN
ajlm-1122	80	41	)	)	PUNCT
ajlm-1122	80	42	.	.	PUNCT
ajlm-1122	81	1	from	from	ADP
ajlm-1122	81	2	these	these	DET
ajlm-1122	81	3	results	result	NOUN
ajlm-1122	81	4	,	,	PUNCT
ajlm-1122	81	5	the	the	DET
ajlm-1122	81	6	physicochemical	physicochemical	ADJ
ajlm-1122	81	7	properties	property	NOUN
ajlm-1122	81	8	of	of	ADP
ajlm-1122	81	9	the	the	DET
ajlm-1122	81	10	peptides	peptide	NOUN
ajlm-1122	81	11	(	(	PUNCT
ajlm-1122	81	12	unique	unique	ADJ
ajlm-1122	81	13	as	as	ADV
ajlm-1122	81	14	well	well	ADV
ajlm-1122	81	15	as	as	ADP
ajlm-1122	81	16	shared	share	VERB
ajlm-1122	81	17	)	)	PUNCT
ajlm-1122	81	18	for	for	ADP
ajlm-1122	81	19	all	all	DET
ajlm-1122	81	20	conditions	condition	NOUN
ajlm-1122	81	21	were	be	AUX
ajlm-1122	81	22	assessed	assess	VERB
ajlm-1122	81	23	for	for	ADP
ajlm-1122	81	24	each	each	DET
ajlm-1122	81	25	patient	patient	NOUN
ajlm-1122	81	26	(	(	PUNCT
ajlm-1122	81	27	supplementary	supplementary	ADJ
ajlm-1122	81	28	document	document	NOUN
ajlm-1122	81	29	–	–	PUNCT
ajlm-1122	81	30	file	file	NOUN
ajlm-1122	81	31	s2	s2	PROPN
ajlm-1122	81	32	)	)	PUNCT
ajlm-1122	81	33	.	.	PUNCT
ajlm-1122	82	1	spectrum	spectrum	NOUN
ajlm-1122	82	2	counting	count	VERB
ajlm-1122	82	3	abundance	abundance	NOUN
ajlm-1122	82	4	indexes	index	NOUN
ajlm-1122	82	5	were	be	AUX
ajlm-1122	82	6	estimated	estimate	VERB
ajlm-1122	82	7	using	use	VERB
ajlm-1122	82	8	the	the	DET
ajlm-1122	82	9	normalised	normalise	VERB
ajlm-1122	82	10	spectrum	spectrum	NOUN
ajlm-1122	82	11	abundance	abundance	PROPN
ajlm-1122	82	12	factor35	factor35	PROPN
ajlm-1122	82	13	as	as	SCONJ
ajlm-1122	82	14	generated	generate	VERB
ajlm-1122	82	15	by	by	ADP
ajlm-1122	82	16	the	the	DET
ajlm-1122	82	17	peptideshaker	peptideshaker	NOUN
ajlm-1122	82	18	software.27,36	software.27,36	NOUN
ajlm-1122	82	19	the	the	DET
ajlm-1122	82	20	normalised	normalise	VERB
ajlm-1122	82	21	spectrum	spectrum	NOUN
ajlm-1122	82	22	abundance	abundance	NOUN
ajlm-1122	82	23	factor	factor	NOUN
ajlm-1122	82	24	values	value	NOUN
ajlm-1122	82	25	were	be	AUX
ajlm-1122	82	26	normalised	normalise	VERB
ajlm-1122	82	27	to	to	PART
ajlm-1122	82	28	facilitate	facilitate	VERB
ajlm-1122	82	29	comparisons	comparison	NOUN
ajlm-1122	82	30	and	and	CCONJ
ajlm-1122	82	31	then	then	ADV
ajlm-1122	82	32	used	use	VERB
ajlm-1122	82	33	to	to	PART
ajlm-1122	82	34	calculate	calculate	VERB
ajlm-1122	82	35	the	the	DET
ajlm-1122	82	36	pearson	pearson	NOUN
ajlm-1122	82	37	’s	’s	PART
ajlm-1122	82	38	correlation	correlation	NOUN
ajlm-1122	82	39	coefficient	coefficient	NOUN
ajlm-1122	82	40	,	,	PUNCT
ajlm-1122	82	41	for	for	ADP
ajlm-1122	82	42	each	each	DET
ajlm-1122	82	43	pair	pair	NOUN
ajlm-1122	82	44	of	of	ADP
ajlm-1122	82	45	experimental	experimental	ADJ
ajlm-1122	82	46	conditions	condition	NOUN
ajlm-1122	82	47	compared	compare	VERB
ajlm-1122	82	48	with	with	ADP
ajlm-1122	82	49	regard	regard	NOUN
ajlm-1122	82	50	to	to	ADP
ajlm-1122	82	51	differential	differential	VERB
ajlm-1122	82	52	protein	protein	NOUN
ajlm-1122	82	53	abundance	abundance	NOUN
ajlm-1122	82	54	,	,	PUNCT
ajlm-1122	82	55	to	to	PART
ajlm-1122	82	56	determine	determine	VERB
ajlm-1122	82	57	the	the	DET
ajlm-1122	82	58	level	level	NOUN
ajlm-1122	82	59	of	of	ADP
ajlm-1122	82	60	correlation	correlation	NOUN
ajlm-1122	82	61	between	between	ADP
ajlm-1122	82	62	samples	sample	NOUN
ajlm-1122	82	63	(	(	PUNCT
ajlm-1122	82	64	supplementary	supplementary	ADJ
ajlm-1122	82	65	document	document	NOUN
ajlm-1122	82	66	–	–	PUNCT
ajlm-1122	82	67	figure	figure	NOUN
ajlm-1122	82	68	s2	s2	PROPN
ajlm-1122	82	69	)	)	PUNCT
ajlm-1122	82	70	.	.	PUNCT
ajlm-1122	83	1	propas	propas	PROPN
ajlm-1122	83	2	(	(	PUNCT
ajlm-1122	83	3	version	version	NOUN
ajlm-1122	83	4	1.1)37	1.1)37	PROPN
ajlm-1122	83	5	(	(	PUNCT
ajlm-1122	83	6	state	state	NOUN
ajlm-1122	83	7	key	key	ADJ
ajlm-1122	83	8	laboratory	laboratory	NOUN
ajlm-1122	83	9	of	of	ADP
ajlm-1122	83	10	proteomics	proteomic	NOUN
ajlm-1122	83	11	,	,	PUNCT
ajlm-1122	83	12	beijing	beijing	PROPN
ajlm-1122	83	13	institute	institute	PROPN
ajlm-1122	83	14	of	of	ADP
ajlm-1122	83	15	radiation	radiation	NOUN
ajlm-1122	83	16	medicine	medicine	NOUN
ajlm-1122	83	17	,	,	PUNCT
ajlm-1122	83	18	beijing	beijing	PROPN
ajlm-1122	83	19	,	,	PUNCT
ajlm-1122	83	20	china	china	PROPN
ajlm-1122	83	21	)	)	PUNCT
ajlm-1122	83	22	was	be	AUX
ajlm-1122	83	23	used	use	VERB
ajlm-1122	83	24	to	to	PART
ajlm-1122	83	25	calculate	calculate	VERB
ajlm-1122	83	26	the	the	DET
ajlm-1122	83	27	physicochemical	physicochemical	ADJ
ajlm-1122	83	28	properties	property	NOUN
ajlm-1122	83	29	(	(	PUNCT
ajlm-1122	83	30	hydropathicity	hydropathicity	NOUN
ajlm-1122	83	31	[	[	X
ajlm-1122	83	32	kyte	kyte	PROPN
ajlm-1122	83	33	and	and	CCONJ
ajlm-1122	83	34	doolittle	doolittle	PROPN
ajlm-1122	83	35	scale],38	scale],38	VERB
ajlm-1122	83	36	molecular	molecular	ADJ
ajlm-1122	83	37	weight	weight	NOUN
ajlm-1122	83	38	and	and	CCONJ
ajlm-1122	83	39	isoelectric	isoelectric	ADJ
ajlm-1122	83	40	point	point	NOUN
ajlm-1122	83	41	)	)	PUNCT
ajlm-1122	83	42	of	of	ADP
ajlm-1122	83	43	identified	identify	VERB
ajlm-1122	83	44	peptides	peptide	NOUN
ajlm-1122	83	45	for	for	ADP
ajlm-1122	83	46	each	each	DET
ajlm-1122	83	47	sample	sample	NOUN
ajlm-1122	83	48	analysed	analyse	VERB
ajlm-1122	83	49	.	.	PUNCT
ajlm-1122	84	1	sample	sample	NOUN
ajlm-1122	84	2	physicochemical	physicochemical	ADJ
ajlm-1122	84	3	characteristics	characteristic	NOUN
ajlm-1122	84	4	were	be	AUX
ajlm-1122	84	5	assessed	assess	VERB
ajlm-1122	84	6	and	and	CCONJ
ajlm-1122	84	7	visualised	visualise	VERB
ajlm-1122	84	8	using	use	VERB
ajlm-1122	84	9	box	box	NOUN
ajlm-1122	84	10	and	and	CCONJ
ajlm-1122	84	11	whisker	whisker	NOUN
ajlm-1122	84	12	plots	plot	NOUN
ajlm-1122	84	13	.	.	PUNCT
ajlm-1122	85	1	gene	gene	NOUN
ajlm-1122	85	2	ontology	ontology	NOUN
ajlm-1122	85	3	(	(	PUNCT
ajlm-1122	85	4	go	go	VERB
ajlm-1122	85	5	)	)	PUNCT
ajlm-1122	85	6	analysis	analysis	NOUN
ajlm-1122	85	7	was	be	AUX
ajlm-1122	85	8	performed	perform	VERB
ajlm-1122	85	9	using	use	VERB
ajlm-1122	85	10	protein	protein	NOUN
ajlm-1122	85	11	annotations	annotation	NOUN
ajlm-1122	85	12	retrieved	retrieve	VERB
ajlm-1122	85	13	from	from	ADP
ajlm-1122	85	14	ensembl	ensembl	PROPN
ajlm-1122	85	15	(	(	PUNCT
ajlm-1122	85	16	www.ensembl.org	www.ensembl.org	PROPN
ajlm-1122	85	17	)	)	PUNCT
ajlm-1122	85	18	and	and	CCONJ
ajlm-1122	85	19	goslim	goslim	NOUN
ajlm-1122	85	20	uniprotkb	uniprotkb	NOUN
ajlm-1122	85	21	-	-	PUNCT
ajlm-1122	85	22	goa	goa	NOUN
ajlm-1122	85	23	(	(	PUNCT
ajlm-1122	85	24	www.ebi.ac.uk/goa	www.ebi.ac.uk/goa	PROPN
ajlm-1122	85	25	)	)	PUNCT
ajlm-1122	85	26	with	with	ADP
ajlm-1122	85	27	hypergeometric	hypergeometric	ADJ
ajlm-1122	85	28	testing	testing	NOUN
ajlm-1122	85	29	to	to	PART
ajlm-1122	85	30	determine	determine	VERB
ajlm-1122	85	31	go	go	VERB
ajlm-1122	85	32	term	term	NOUN
ajlm-1122	85	33	significance	significance	NOUN
ajlm-1122	85	34	.	.	PUNCT
ajlm-1122	86	1	the	the	DET
ajlm-1122	86	2	protein	protein	NOUN
ajlm-1122	86	3	extraction	extraction	NOUN
ajlm-1122	86	4	buffers	buffer	NOUN
ajlm-1122	86	5	’	'	PUNCT
ajlm-1122	86	6	(	(	PUNCT
ajlm-1122	86	7	with	with	ADP
ajlm-1122	86	8	or	or	CCONJ
ajlm-1122	86	9	without	without	ADP
ajlm-1122	86	10	addition	addition	NOUN
ajlm-1122	86	11	of	of	ADP
ajlm-1122	86	12	peg	peg	NOUN
ajlm-1122	86	13	)	)	PUNCT
ajlm-1122	86	14	protein	protein	NOUN
ajlm-1122	86	15	selection	selection	NOUN
ajlm-1122	86	16	bias	bias	NOUN
ajlm-1122	86	17	,	,	PUNCT
ajlm-1122	86	18	as	as	ADV
ajlm-1122	86	19	well	well	ADV
ajlm-1122	86	20	as	as	ADP
ajlm-1122	86	21	residual	residual	ADJ
ajlm-1122	86	22	proteins	protein	NOUN
ajlm-1122	86	23	of	of	ADP
ajlm-1122	86	24	the	the	DET
ajlm-1122	86	25	sample	sample	NOUN
ajlm-1122	86	26	pellets	pellet	NOUN
ajlm-1122	86	27	,	,	PUNCT
ajlm-1122	86	28	was	be	AUX
ajlm-1122	86	29	assessed	assess	VERB
ajlm-1122	86	30	with	with	ADP
ajlm-1122	86	31	regard	regard	NOUN
ajlm-1122	86	32	to	to	ADP
ajlm-1122	86	33	subcellular	subcellular	ADJ
ajlm-1122	86	34	localisation	localisation	NOUN
ajlm-1122	86	35	,	,	PUNCT
ajlm-1122	86	36	using	use	VERB
ajlm-1122	86	37	go	go	VERB
ajlm-1122	86	38	analysis	analysis	NOUN
ajlm-1122	86	39	.	.	PUNCT
ajlm-1122	87	1	results	result	NOUN
ajlm-1122	87	2	from	from	ADP
ajlm-1122	87	3	the	the	DET
ajlm-1122	87	4	go	go	NOUN
ajlm-1122	87	5	annotation	annotation	NOUN
ajlm-1122	87	6	were	be	AUX
ajlm-1122	87	7	visualised	visualise	VERB
ajlm-1122	87	8	with	with	ADP
ajlm-1122	87	9	a	a	DET
ajlm-1122	87	10	bar	bar	NOUN
ajlm-1122	87	11	plot	plot	NOUN
ajlm-1122	87	12	showing	show	VERB
ajlm-1122	87	13	percentages	percentage	NOUN
ajlm-1122	87	14	of	of	ADP
ajlm-1122	87	15	proteins	protein	NOUN
ajlm-1122	87	16	belonging	belong	VERB
ajlm-1122	87	17	to	to	ADP
ajlm-1122	87	18	each	each	DET
ajlm-1122	87	19	go	go	VERB
ajlm-1122	87	20	term	term	NOUN
ajlm-1122	87	21	and	and	CCONJ
ajlm-1122	87	22	their	their	PRON
ajlm-1122	87	23	location	location	NOUN
ajlm-1122	87	24	.	.	PUNCT
ajlm-1122	88	1	the	the	DET
ajlm-1122	88	2	percentages	percentage	NOUN
ajlm-1122	88	3	of	of	ADP
ajlm-1122	88	4	missed	miss	VERB
ajlm-1122	88	5	cleavages	cleavage	NOUN
ajlm-1122	88	6	for	for	ADP
ajlm-1122	88	7	all	all	DET
ajlm-1122	88	8	samples	sample	NOUN
ajlm-1122	88	9	were	be	AUX
ajlm-1122	88	10	calculated	calculate	VERB
ajlm-1122	88	11	and	and	CCONJ
ajlm-1122	88	12	graphically	graphically	ADV
ajlm-1122	88	13	visualised	visualise	VERB
ajlm-1122	88	14	and	and	CCONJ
ajlm-1122	88	15	displayed	display	VERB
ajlm-1122	88	16	using	use	VERB
ajlm-1122	88	17	pandas	panda	NOUN
ajlm-1122	88	18	,	,	PUNCT
ajlm-1122	88	19	numpy	numpy	NOUN
ajlm-1122	88	20	and	and	CCONJ
ajlm-1122	88	21	matplotlib	matplotlib	PROPN
ajlm-1122	88	22	python	python	PROPN
ajlm-1122	88	23	packages	package	NOUN
ajlm-1122	88	24	(	(	PUNCT
ajlm-1122	88	25	python	python	PROPN
ajlm-1122	88	26	software	software	PROPN
ajlm-1122	88	27	foundation	foundation	PROPN
ajlm-1122	88	28	,	,	PUNCT
ajlm-1122	88	29	wilmington	wilmington	PROPN
ajlm-1122	88	30	,	,	PUNCT
ajlm-1122	88	31	delaware	delaware	PROPN
ajlm-1122	88	32	,	,	PUNCT
ajlm-1122	88	33	united	united	PROPN
ajlm-1122	88	34	states	states	PROPN
ajlm-1122	88	35	)	)	PUNCT
ajlm-1122	88	36	.	.	PUNCT
ajlm-1122	89	1	results	result	VERB
ajlm-1122	89	2	effect	effect	NOUN
ajlm-1122	89	3	of	of	ADP
ajlm-1122	89	4	polyethylene	polyethylene	NOUN
ajlm-1122	89	5	glycol	glycol	NOUN
ajlm-1122	89	6	on	on	ADP
ajlm-1122	89	7	peptide	peptide	NOUN
ajlm-1122	89	8	and	and	CCONJ
ajlm-1122	89	9	protein	protein	NOUN
ajlm-1122	89	10	identification	identification	NOUN
ajlm-1122	89	11	we	we	PRON
ajlm-1122	89	12	processed	process	VERB
ajlm-1122	89	13	the	the	DET
ajlm-1122	89	14	ffpe	ffpe	ADJ
ajlm-1122	89	15	colonic	colonic	ADJ
ajlm-1122	89	16	resection	resection	NOUN
ajlm-1122	89	17	tumour	tumour	NOUN
ajlm-1122	89	18	tissues	tissue	NOUN
ajlm-1122	89	19	of	of	ADP
ajlm-1122	89	20	three	three	NUM
ajlm-1122	89	21	patients	patient	NOUN
ajlm-1122	89	22	(	(	PUNCT
ajlm-1122	89	23	diagnosed	diagnose	VERB
ajlm-1122	89	24	as	as	SCONJ
ajlm-1122	89	25	indicated	indicate	VERB
ajlm-1122	89	26	in	in	ADP
ajlm-1122	89	27	table	table	NOUN
ajlm-1122	89	28	1	1	NUM
ajlm-1122	89	29	)	)	PUNCT
ajlm-1122	89	30	.	.	PUNCT
ajlm-1122	90	1	for	for	ADP
ajlm-1122	90	2	all	all	DET
ajlm-1122	90	3	three	three	NUM
ajlm-1122	90	4	patients	patient	NOUN
ajlm-1122	90	5	,	,	PUNCT
ajlm-1122	90	6	non	non	ADJ
ajlm-1122	90	7	-	-	ADJ
ajlm-1122	90	8	fractionated	fractionated	ADJ
ajlm-1122	90	9	lc	lc	PROPN
ajlm-1122	90	10	-	-	PUNCT
ajlm-1122	90	11	ms	ms	PROPN
ajlm-1122	90	12	/	/	SYM
ajlm-1122	90	13	ms	ms	NOUN
ajlm-1122	90	14	analysis	analysis	NOUN
ajlm-1122	90	15	showed	show	VERB
ajlm-1122	90	16	that	that	SCONJ
ajlm-1122	90	17	overall	overall	ADJ
ajlm-1122	90	18	,	,	PUNCT
ajlm-1122	90	19	the	the	DET
ajlm-1122	90	20	wcpls	wcpls	NOUN
ajlm-1122	90	21	extracted	extract	VERB
ajlm-1122	90	22	with	with	ADP
ajlm-1122	90	23	2	2	NUM
ajlm-1122	90	24	%	%	NOUN
ajlm-1122	90	25	sds	sds	NOUN
ajlm-1122	90	26	and	and	CCONJ
ajlm-1122	90	27	peg	peg	NOUN
ajlm-1122	90	28	had	have	VERB
ajlm-1122	90	29	lower	low	ADJ
ajlm-1122	90	30	numbers	number	NOUN
ajlm-1122	90	31	of	of	ADP
ajlm-1122	90	32	identifications	identification	NOUN
ajlm-1122	90	33	at	at	ADP
ajlm-1122	90	34	both	both	CCONJ
ajlm-1122	90	35	the	the	DET
ajlm-1122	90	36	peptide	peptide	NOUN
ajlm-1122	90	37	and	and	CCONJ
ajlm-1122	90	38	protein	protein	NOUN
ajlm-1122	90	39	levels	level	NOUN
ajlm-1122	90	40	(	(	PUNCT
ajlm-1122	90	41	validated	validate	VERB
ajlm-1122	90	42	peptides	peptide	NOUN
ajlm-1122	90	43	=	=	SYM
ajlm-1122	90	44	6840	6840	NUM
ajlm-1122	90	45	[	[	X
ajlm-1122	90	46	±	±	NUM
ajlm-1122	90	47	588	588	NUM
ajlm-1122	90	48	standard	standard	ADJ
ajlm-1122	90	49	deviation	deviation	NOUN
ajlm-1122	90	50	{	{	PUNCT
ajlm-1122	90	51	s.d	s.d	PROPN
ajlm-1122	90	52	.	.	PROPN
ajlm-1122	90	53	}	}	PUNCT
ajlm-1122	90	54	]	]	PUNCT
ajlm-1122	90	55	)	)	PUNCT
ajlm-1122	90	56	and	and	CCONJ
ajlm-1122	90	57	validated	validate	VERB
ajlm-1122	90	58	proteins	protein	NOUN
ajlm-1122	90	59	=	=	SYM
ajlm-1122	90	60	2302	2302	NUM
ajlm-1122	90	61	(	(	PUNCT
ajlm-1122	90	62	±	±	PROPN
ajlm-1122	90	63	127	127	NUM
ajlm-1122	90	64	s.d	s.d	PROPN
ajlm-1122	90	65	.	.	PUNCT
ajlm-1122	90	66	)	)	PUNCT
ajlm-1122	91	1	(	(	PUNCT
ajlm-1122	91	2	figure	figure	VERB
ajlm-1122	91	3	3a	3a	NUM
ajlm-1122	91	4	and	and	CCONJ
ajlm-1122	91	5	figure	figure	VERB
ajlm-1122	91	6	3c	3c	NUM
ajlm-1122	91	7	)	)	PUNCT
ajlm-1122	91	8	.	.	PUNCT
ajlm-1122	92	1	on	on	ADP
ajlm-1122	92	2	the	the	DET
ajlm-1122	92	3	other	other	ADJ
ajlm-1122	92	4	hand	hand	NOUN
ajlm-1122	92	5	,	,	PUNCT
ajlm-1122	92	6	the	the	DET
ajlm-1122	92	7	wcpls	wcpls	NOUN
ajlm-1122	92	8	extracted	extract	VERB
ajlm-1122	92	9	without	without	ADP
ajlm-1122	92	10	peg	peg	NOUN
ajlm-1122	92	11	showed	show	VERB
ajlm-1122	92	12	higher	high	ADJ
ajlm-1122	92	13	numbers	number	NOUN
ajlm-1122	92	14	of	of	ADP
ajlm-1122	92	15	identifications	identification	NOUN
ajlm-1122	92	16	(	(	PUNCT
ajlm-1122	92	17	validated	validate	VERB
ajlm-1122	92	18	peptides	peptide	NOUN
ajlm-1122	92	19	=	=	SYM
ajlm-1122	92	20	7058	7058	NUM
ajlm-1122	92	21	[	[	X
ajlm-1122	92	22	±	±	NUM
ajlm-1122	92	23	649	649	NUM
ajlm-1122	92	24	s.d	s.d	PROPN
ajlm-1122	92	25	.	.	PROPN
ajlm-1122	92	26	]	]	PUNCT
ajlm-1122	92	27	and	and	CCONJ
ajlm-1122	92	28	validated	validated	ADJ
ajlm-1122	92	29	proteins	protein	NOUN
ajlm-1122	92	30	=	=	SYM
ajlm-1122	92	31	2314	2314	NUM
ajlm-1122	92	32	[	[	X
ajlm-1122	92	33	±	±	NUM
ajlm-1122	92	34	230	230	NUM
ajlm-1122	92	35	s.d	s.d	PROPN
ajlm-1122	92	36	.	.	PROPN
ajlm-1122	92	37	]	]	PUNCT
ajlm-1122	92	38	)	)	PUNCT
ajlm-1122	92	39	with	with	ADP
ajlm-1122	92	40	adequate	adequate	ADJ
ajlm-1122	92	41	reproducibility	reproducibility	NOUN
ajlm-1122	92	42	(	(	PUNCT
ajlm-1122	92	43	figure	figure	NOUN
ajlm-1122	92	44	3a	3a	NUM
ajlm-1122	92	45	and	and	CCONJ
ajlm-1122	92	46	figure	figure	VERB
ajlm-1122	92	47	3c	3c	NUM
ajlm-1122	92	48	)	)	PUNCT
ajlm-1122	92	49	.	.	PUNCT
ajlm-1122	93	1	the	the	DET
ajlm-1122	93	2	pellet	pellet	NOUN
ajlm-1122	93	3	samples	sample	NOUN
ajlm-1122	93	4	extracted	extract	VERB
ajlm-1122	93	5	with	with	ADP
ajlm-1122	93	6	4	4	NUM
ajlm-1122	93	7	%	%	NOUN
ajlm-1122	93	8	sds	sds	NOUN
ajlm-1122	93	9	showed	show	VERB
ajlm-1122	93	10	higher	high	ADJ
ajlm-1122	93	11	overall	overall	ADJ
ajlm-1122	93	12	variability	variability	NOUN
ajlm-1122	93	13	at	at	ADP
ajlm-1122	93	14	both	both	CCONJ
ajlm-1122	93	15	peptide	peptide	ADJ
ajlm-1122	93	16	and	and	CCONJ
ajlm-1122	93	17	protein	protein	NOUN
ajlm-1122	93	18	levels	level	NOUN
ajlm-1122	93	19	.	.	PUNCT
ajlm-1122	94	1	however	however	ADV
ajlm-1122	94	2	,	,	PUNCT
ajlm-1122	94	3	the	the	DET
ajlm-1122	94	4	numbers	number	NOUN
ajlm-1122	94	5	of	of	ADP
ajlm-1122	94	6	peptide	peptide	NOUN
ajlm-1122	94	7	and	and	CCONJ
ajlm-1122	94	8	protein	protein	NOUN
ajlm-1122	94	9	identifications	identification	NOUN
ajlm-1122	94	10	were	be	AUX
ajlm-1122	94	11	high	high	ADJ
ajlm-1122	94	12	for	for	ADP
ajlm-1122	94	13	pellets	pellet	NOUN
ajlm-1122	94	14	extracted	extract	VERB
ajlm-1122	94	15	without	without	ADP
ajlm-1122	94	16	peg	peg	NOUN
ajlm-1122	94	17	(	(	PUNCT
ajlm-1122	94	18	validated	validate	VERB
ajlm-1122	94	19	peptides	peptide	NOUN
ajlm-1122	94	20	=	=	SYM
ajlm-1122	94	21	5999	5999	NUM
ajlm-1122	94	22	[	[	SYM
ajlm-1122	94	23	±	±	NUM
ajlm-1122	94	24	2176	2176	NUM
ajlm-1122	94	25	s.d	s.d	PROPN
ajlm-1122	94	26	.	.	PROPN
ajlm-1122	94	27	]	]	PUNCT
ajlm-1122	94	28	and	and	CCONJ
ajlm-1122	94	29	validated	validated	ADJ
ajlm-1122	94	30	proteins	protein	NOUN
ajlm-1122	94	31	=	=	SYM
ajlm-1122	94	32	1893	1893	NUM
ajlm-1122	94	33	[	[	X
ajlm-1122	94	34	±	±	NUM
ajlm-1122	94	35	555	555	NUM
ajlm-1122	94	36	s.d	s.d	PROPN
ajlm-1122	94	37	.	.	PROPN
ajlm-1122	94	38	]	]	PUNCT
ajlm-1122	94	39	)	)	PUNCT
ajlm-1122	94	40	and	and	CCONJ
ajlm-1122	94	41	for	for	ADP
ajlm-1122	94	42	pellets	pellet	NOUN
ajlm-1122	94	43	extracted	extract	VERB
ajlm-1122	94	44	with	with	ADP
ajlm-1122	94	45	peg	peg	NOUN
ajlm-1122	94	46	(	(	PUNCT
ajlm-1122	94	47	validated	validate	VERB
ajlm-1122	94	48	peptides	peptide	NOUN
ajlm-1122	94	49	=	=	SYM
ajlm-1122	94	50	4778	4778	NUM
ajlm-1122	95	1	[	[	X
ajlm-1122	95	2	±	±	NUM
ajlm-1122	95	3	1764	1764	NUM
ajlm-1122	95	4	s.d	s.d	PROPN
ajlm-1122	95	5	.	.	PROPN
ajlm-1122	95	6	]	]	PUNCT
ajlm-1122	95	7	and	and	CCONJ
ajlm-1122	95	8	validated	validated	ADJ
ajlm-1122	95	9	proteins	protein	NOUN
ajlm-1122	95	10	=	=	SYM
ajlm-1122	95	11	1564	1564	NUM
ajlm-1122	95	12	[	[	X
ajlm-1122	95	13	±	±	NUM
ajlm-1122	95	14	456	456	NUM
ajlm-1122	95	15	s.d	s.d	PROPN
ajlm-1122	95	16	.	.	PROPN
ajlm-1122	95	17	]	]	PUNCT
ajlm-1122	95	18	)	)	PUNCT
ajlm-1122	95	19	(	(	PUNCT
ajlm-1122	95	20	figure	figure	VERB
ajlm-1122	95	21	3a	3a	NUM
ajlm-1122	95	22	and	and	CCONJ
ajlm-1122	95	23	figure	figure	VERB
ajlm-1122	95	24	3c	3c	NUM
ajlm-1122	95	25	)	)	PUNCT
ajlm-1122	95	26	.	.	PUNCT
ajlm-1122	96	1	for	for	ADP
ajlm-1122	96	2	overlap	overlap	NOUN
ajlm-1122	96	3	calculated	calculate	VERB
ajlm-1122	96	4	from	from	ADP
ajlm-1122	96	5	merged	merged	ADJ
ajlm-1122	96	6	lists	list	NOUN
ajlm-1122	96	7	of	of	ADP
ajlm-1122	96	8	peptide	peptide	ADJ
ajlm-1122	96	9	sequences	sequence	NOUN
ajlm-1122	96	10	,	,	PUNCT
ajlm-1122	96	11	27.1	27.1	NUM
ajlm-1122	96	12	%	%	NOUN
ajlm-1122	96	13	of	of	ADP
ajlm-1122	96	14	identified	identify	VERB
ajlm-1122	96	15	peptides	peptide	NOUN
ajlm-1122	96	16	were	be	AUX
ajlm-1122	96	17	shared	share	VERB
ajlm-1122	96	18	or	or	CCONJ
ajlm-1122	96	19	overlapped	overlap	VERB
ajlm-1122	96	20	between	between	ADP
ajlm-1122	96	21	all	all	DET
ajlm-1122	96	22	the	the	DET
ajlm-1122	96	23	experimental	experimental	ADJ
ajlm-1122	96	24	conditions	condition	NOUN
ajlm-1122	96	25	(	(	PUNCT
ajlm-1122	96	26	figure	figure	NOUN
ajlm-1122	96	27	3b	3b	NUM
ajlm-1122	96	28	)	)	PUNCT
ajlm-1122	96	29	.	.	PUNCT
ajlm-1122	97	1	lower	low	ADJ
ajlm-1122	97	2	percentages	percentage	NOUN
ajlm-1122	97	3	of	of	ADP
ajlm-1122	97	4	unique	unique	ADJ
ajlm-1122	97	5	peptides	peptide	NOUN
ajlm-1122	97	6	were	be	AUX
ajlm-1122	97	7	identified	identify	VERB
ajlm-1122	97	8	for	for	ADP
ajlm-1122	97	9	the	the	DET
ajlm-1122	97	10	pellets	pellet	NOUN
ajlm-1122	97	11	(	(	PUNCT
ajlm-1122	97	12	8.7	8.7	NUM
ajlm-1122	97	13	%	%	NOUN
ajlm-1122	97	14	without	without	ADP
ajlm-1122	97	15	peg	peg	NOUN
ajlm-1122	97	16	and	and	CCONJ
ajlm-1122	97	17	3.7	3.7	NUM
ajlm-1122	97	18	%	%	NOUN
ajlm-1122	97	19	with	with	ADP
ajlm-1122	97	20	peg	peg	NOUN
ajlm-1122	97	21	)	)	PUNCT
ajlm-1122	97	22	,	,	PUNCT
ajlm-1122	97	23	compared	compare	VERB
ajlm-1122	97	24	to	to	ADP
ajlm-1122	97	25	the	the	DET
ajlm-1122	97	26	wcpls	wcpls	NOUN
ajlm-1122	97	27	(	(	PUNCT
ajlm-1122	97	28	10.3	10.3	NUM
ajlm-1122	97	29	%	%	NOUN
ajlm-1122	97	30	without	without	ADP
ajlm-1122	97	31	peg	peg	NOUN
ajlm-1122	97	32	and	and	CCONJ
ajlm-1122	97	33	11.8	11.8	NUM
ajlm-1122	97	34	%	%	NOUN
ajlm-1122	97	35	with	with	ADP
ajlm-1122	97	36	peg	peg	NOUN
ajlm-1122	97	37	)	)	PUNCT
ajlm-1122	97	38	.	.	PUNCT
ajlm-1122	98	1	for	for	ADP
ajlm-1122	98	2	overlap	overlap	NOUN
ajlm-1122	98	3	calculated	calculate	VERB
ajlm-1122	98	4	from	from	ADP
ajlm-1122	98	5	merged	merged	ADJ
ajlm-1122	98	6	lists	list	NOUN
ajlm-1122	98	7	of	of	ADP
ajlm-1122	98	8	protein	protein	NOUN
ajlm-1122	98	9	accession	accession	NOUN
ajlm-1122	98	10	numbers	number	NOUN
ajlm-1122	98	11	(	(	PUNCT
ajlm-1122	98	12	individual	individual	ADJ
ajlm-1122	98	13	as	as	ADV
ajlm-1122	98	14	well	well	ADV
ajlm-1122	98	15	as	as	ADP
ajlm-1122	98	16	protein	protein	NOUN
ajlm-1122	98	17	groups	group	NOUN
ajlm-1122	98	18	)	)	PUNCT
ajlm-1122	98	19	,	,	PUNCT
ajlm-1122	98	20	38	38	NUM
ajlm-1122	98	21	%	%	NOUN
ajlm-1122	98	22	of	of	ADP
ajlm-1122	98	23	identified	identify	VERB
ajlm-1122	98	24	proteins	protein	NOUN
ajlm-1122	98	25	were	be	AUX
ajlm-1122	98	26	shared	share	VERB
ajlm-1122	98	27	or	or	CCONJ
ajlm-1122	98	28	overlapped	overlap	VERB
ajlm-1122	98	29	between	between	ADP
ajlm-1122	98	30	all	all	DET
ajlm-1122	98	31	the	the	DET
ajlm-1122	98	32	experimental	experimental	ADJ
ajlm-1122	98	33	conditions	condition	NOUN
ajlm-1122	98	34	.	.	PUNCT
ajlm-1122	99	1	lower	low	ADJ
ajlm-1122	99	2	percentages	percentage	NOUN
ajlm-1122	99	3	of	of	ADP
ajlm-1122	99	4	unique	unique	ADJ
ajlm-1122	99	5	proteins	protein	NOUN
ajlm-1122	99	6	were	be	AUX
ajlm-1122	99	7	identified	identify	VERB
ajlm-1122	99	8	for	for	ADP
ajlm-1122	99	9	the	the	DET
ajlm-1122	99	10	pellets	pellet	NOUN
ajlm-1122	99	11	(	(	PUNCT
ajlm-1122	99	12	5.1	5.1	NUM
ajlm-1122	99	13	%	%	NOUN
ajlm-1122	99	14	without	without	ADP
ajlm-1122	99	15	peg	peg	NOUN
ajlm-1122	99	16	and	and	CCONJ
ajlm-1122	99	17	3.5	3.5	NUM
ajlm-1122	99	18	%	%	NOUN
ajlm-1122	99	19	with	with	ADP
ajlm-1122	99	20	peg	peg	NOUN
ajlm-1122	99	21	)	)	PUNCT
ajlm-1122	99	22	,	,	PUNCT
ajlm-1122	99	23	compared	compare	VERB
ajlm-1122	99	24	to	to	ADP
ajlm-1122	99	25	the	the	DET
ajlm-1122	99	26	wcpls	wcpls	NOUN
ajlm-1122	99	27	(	(	PUNCT
ajlm-1122	99	28	9.4	9.4	NUM
ajlm-1122	99	29	%	%	NOUN
ajlm-1122	99	30	with	with	ADP
ajlm-1122	99	31	and	and	CCONJ
ajlm-1122	99	32	without	without	ADP
ajlm-1122	99	33	peg	peg	NOUN
ajlm-1122	99	34	)	)	PUNCT
ajlm-1122	99	35	.	.	PUNCT
ajlm-1122	100	1	no	no	DET
ajlm-1122	100	2	substantial	substantial	ADJ
ajlm-1122	100	3	differences	difference	NOUN
ajlm-1122	100	4	were	be	AUX
ajlm-1122	100	5	observed	observe	VERB
ajlm-1122	100	6	for	for	ADP
ajlm-1122	100	7	the	the	DET
ajlm-1122	100	8	physicochemical	physicochemical	ADJ
ajlm-1122	100	9	properties	property	NOUN
ajlm-1122	100	10	of	of	ADP
ajlm-1122	100	11	the	the	DET
ajlm-1122	100	12	peptides	peptide	NOUN
ajlm-1122	100	13	for	for	ADP
ajlm-1122	100	14	each	each	DET
ajlm-1122	100	15	patient	patient	NOUN
ajlm-1122	100	16	(	(	PUNCT
ajlm-1122	100	17	supplementary	supplementary	ADJ
ajlm-1122	100	18	document	document	NOUN
ajlm-1122	100	19	–	–	PUNCT
ajlm-1122	100	20	file	file	NOUN
ajlm-1122	100	21	s2	s2	NOUN
ajlm-1122	100	22	)	)	PUNCT
ajlm-1122	100	23	.	.	PUNCT
ajlm-1122	101	1	all	all	DET
ajlm-1122	101	2	experimental	experimental	ADJ
ajlm-1122	101	3	conditions	condition	NOUN
ajlm-1122	101	4	yielded	yield	VERB
ajlm-1122	101	5	comparable	comparable	ADJ
ajlm-1122	101	6	relative	relative	ADJ
ajlm-1122	101	7	protein	protein	NOUN
ajlm-1122	101	8	abundances	abundance	NOUN
ajlm-1122	101	9	,	,	PUNCT
ajlm-1122	101	10	indicating	indicate	VERB
ajlm-1122	101	11	that	that	SCONJ
ajlm-1122	101	12	protein	protein	NOUN
ajlm-1122	101	13	extraction	extraction	NOUN
ajlm-1122	101	14	with	with	ADP
ajlm-1122	101	15	and	and	CCONJ
ajlm-1122	101	16	without	without	ADP
ajlm-1122	101	17	peg	peg	NOUN
ajlm-1122	101	18	did	do	AUX
ajlm-1122	101	19	not	not	PART
ajlm-1122	101	20	introduce	introduce	VERB
ajlm-1122	101	21	a	a	DET
ajlm-1122	101	22	substantial	substantial	ADJ
ajlm-1122	101	23	observable	observable	ADJ
ajlm-1122	101	24	bias	bias	NOUN
ajlm-1122	101	25	with	with	ADP
ajlm-1122	101	26	regard	regard	NOUN
ajlm-1122	101	27	to	to	ADP
ajlm-1122	101	28	proteome	proteome	ADJ
ajlm-1122	101	29	composition	composition	NOUN
ajlm-1122	101	30	.	.	PUNCT
ajlm-1122	102	1	evaluation	evaluation	NOUN
ajlm-1122	102	2	of	of	ADP
ajlm-1122	102	3	protein	protein	NOUN
ajlm-1122	102	4	physicochemical	physicochemical	ADJ
ajlm-1122	102	5	properties	property	NOUN
ajlm-1122	102	6	and	and	CCONJ
ajlm-1122	102	7	go	go	VERB
ajlm-1122	102	8	analysis	analysis	NOUN
ajlm-1122	102	9	the	the	DET
ajlm-1122	102	10	hydropathicity	hydropathicity	NOUN
ajlm-1122	102	11	scales	scale	NOUN
ajlm-1122	102	12	of	of	ADP
ajlm-1122	102	13	all	all	DET
ajlm-1122	102	14	identified	identify	VERB
ajlm-1122	102	15	peptides	peptide	NOUN
ajlm-1122	102	16	generated	generate	VERB
ajlm-1122	102	17	from	from	ADP
ajlm-1122	102	18	each	each	DET
ajlm-1122	102	19	experimental	experimental	ADJ
ajlm-1122	102	20	condition	condition	NOUN
ajlm-1122	102	21	were	be	AUX
ajlm-1122	102	22	similar	similar	ADJ
ajlm-1122	102	23	(	(	PUNCT
ajlm-1122	102	24	figure	figure	NOUN
ajlm-1122	102	25	4a	4a	NUM
ajlm-1122	102	26	)	)	PUNCT
ajlm-1122	102	27	.	.	PUNCT
ajlm-1122	103	1	the	the	DET
ajlm-1122	103	2	majority	majority	NOUN
ajlm-1122	103	3	of	of	ADP
ajlm-1122	103	4	proteins	protein	NOUN
ajlm-1122	103	5	extracted	extract	VERB
ajlm-1122	103	6	(	(	PUNCT
ajlm-1122	103	7	with	with	ADP
ajlm-1122	103	8	and	and	CCONJ
ajlm-1122	103	9	without	without	ADP
ajlm-1122	103	10	peg	peg	NOUN
ajlm-1122	103	11	)	)	PUNCT
ajlm-1122	103	12	and	and	CCONJ
ajlm-1122	103	13	processed	process	VERB
ajlm-1122	103	14	via	via	ADP
ajlm-1122	103	15	the	the	DET
ajlm-1122	103	16	hilic	hilic	NOUN
ajlm-1122	103	17	/	/	SYM
ajlm-1122	103	18	sp3	sp3	ADJ
ajlm-1122	103	19	method	method	NOUN
ajlm-1122	103	20	were	be	AUX
ajlm-1122	103	21	hydrophilic	hydrophilic	ADJ
ajlm-1122	103	22	,	,	PUNCT
ajlm-1122	103	23	since	since	SCONJ
ajlm-1122	103	24	the	the	DET
ajlm-1122	103	25	average	average	ADJ
ajlm-1122	103	26	hydropathicities	hydropathicitie	NOUN
ajlm-1122	103	27	of	of	ADP
ajlm-1122	103	28	all	all	DET
ajlm-1122	103	29	samples	sample	NOUN
ajlm-1122	103	30	were	be	AUX
ajlm-1122	103	31	negative	negative	ADJ
ajlm-1122	103	32	(	(	PUNCT
ajlm-1122	103	33	in	in	ADP
ajlm-1122	103	34	accordance	accordance	NOUN
ajlm-1122	103	35	with	with	ADP
ajlm-1122	103	36	the	the	DET
ajlm-1122	103	37	kyte	kyte	PROPN
ajlm-1122	103	38	and	and	CCONJ
ajlm-1122	103	39	doolittle	doolittle	PROPN
ajlm-1122	103	40	scale38	scale38	ADV
ajlm-1122	103	41	and	and	CCONJ
ajlm-1122	103	42	as	as	SCONJ
ajlm-1122	103	43	described	describe	VERB
ajlm-1122	103	44	by	by	ADP
ajlm-1122	103	45	farias39	farias39	NOUN
ajlm-1122	103	46	)	)	PUNCT
ajlm-1122	103	47	.	.	PUNCT
ajlm-1122	104	1	some	some	DET
ajlm-1122	104	2	differences	difference	NOUN
ajlm-1122	104	3	were	be	AUX
ajlm-1122	104	4	observed	observe	VERB
ajlm-1122	104	5	between	between	ADP
ajlm-1122	104	6	pellet	pellet	NOUN
ajlm-1122	104	7	samples	sample	NOUN
ajlm-1122	104	8	and	and	CCONJ
ajlm-1122	104	9	wcpls	wcpls	NOUN
ajlm-1122	104	10	(	(	PUNCT
ajlm-1122	104	11	extracted	extract	VERB
ajlm-1122	104	12	with	with	ADP
ajlm-1122	104	13	and	and	CCONJ
ajlm-1122	104	14	without	without	ADP
ajlm-1122	104	15	peg	peg	NOUN
ajlm-1122	104	16	)	)	PUNCT
ajlm-1122	104	17	.	.	PUNCT
ajlm-1122	105	1	the	the	DET
ajlm-1122	105	2	pellet	pellet	NOUN
ajlm-1122	105	3	samples	sample	NOUN
ajlm-1122	105	4	seemed	seem	VERB
ajlm-1122	105	5	slightly	slightly	ADV
ajlm-1122	105	6	more	more	ADV
ajlm-1122	105	7	hydrophobic	hydrophobic	ADJ
ajlm-1122	105	8	or	or	CCONJ
ajlm-1122	105	9	neutral	neutral	ADJ
ajlm-1122	105	10	(	(	PUNCT
ajlm-1122	105	11	closer	close	ADJ
ajlm-1122	105	12	to	to	ADP
ajlm-1122	105	13	0	0	NUM
ajlm-1122	105	14	)	)	PUNCT
ajlm-1122	105	15	in	in	ADP
ajlm-1122	105	16	nature	nature	NOUN
ajlm-1122	105	17	compared	compare	VERB
ajlm-1122	105	18	to	to	ADP
ajlm-1122	105	19	the	the	DET
ajlm-1122	105	20	wcpls	wcpls	NOUN
ajlm-1122	105	21	.	.	PUNCT
ajlm-1122	106	1	however	however	ADV
ajlm-1122	106	2	,	,	PUNCT
ajlm-1122	106	3	neither	neither	CCONJ
ajlm-1122	106	4	the	the	DET
ajlm-1122	106	5	addition	addition	NOUN
ajlm-1122	106	6	nor	nor	CCONJ
ajlm-1122	106	7	omission	omission	NOUN
ajlm-1122	106	8	of	of	ADP
ajlm-1122	106	9	peg	peg	NOUN
ajlm-1122	106	10	from	from	ADP
ajlm-1122	106	11	the	the	DET
ajlm-1122	106	12	protein	protein	NOUN
ajlm-1122	106	13	extraction	extraction	NOUN
ajlm-1122	106	14	buffer	buffer	NOUN
ajlm-1122	106	15	affected	affect	VERB
ajlm-1122	106	16	or	or	CCONJ
ajlm-1122	106	17	showed	show	VERB
ajlm-1122	106	18	a	a	DET
ajlm-1122	106	19	substantial	substantial	ADJ
ajlm-1122	106	20	hydropathicity	hydropathicity	NOUN
ajlm-1122	106	21	preference	preference	NOUN
ajlm-1122	106	22	or	or	CCONJ
ajlm-1122	106	23	selection	selection	NOUN
ajlm-1122	106	24	bias	bias	NOUN
ajlm-1122	106	25	with	with	ADP
ajlm-1122	106	26	regard	regard	NOUN
ajlm-1122	106	27	to	to	ADP
ajlm-1122	106	28	extracted	extract	VERB
ajlm-1122	106	29	peptides	peptide	NOUN
ajlm-1122	106	30	.	.	PUNCT
ajlm-1122	107	1	the	the	DET
ajlm-1122	107	2	molecular	molecular	ADJ
ajlm-1122	107	3	weight	weight	NOUN
ajlm-1122	107	4	ranges	range	NOUN
ajlm-1122	107	5	(	(	PUNCT
ajlm-1122	107	6	majority	majority	NOUN
ajlm-1122	107	7	>	>	X
ajlm-1122	107	8	1000	1000	NUM
ajlm-1122	107	9	dalton	dalton	PROPN
ajlm-1122	108	1	[	[	X
ajlm-1122	108	2	da	da	X
ajlm-1122	108	3	]	]	X
ajlm-1122	108	4	and	and	CCONJ
ajlm-1122	108	5	<	<	X
ajlm-1122	108	6	2000	2000	NUM
ajlm-1122	108	7	da	da	NOUN
ajlm-1122	108	8	)	)	PUNCT
ajlm-1122	108	9	(	(	PUNCT
ajlm-1122	108	10	figure	figure	VERB
ajlm-1122	108	11	4b	4b	PROPN
ajlm-1122	108	12	)	)	PUNCT
ajlm-1122	108	13	,	,	PUNCT
ajlm-1122	108	14	as	as	ADV
ajlm-1122	108	15	well	well	ADV
ajlm-1122	108	16	as	as	ADP
ajlm-1122	108	17	isoelectric	isoelectric	ADJ
ajlm-1122	108	18	point	point	NOUN
ajlm-1122	108	19	(	(	PUNCT
ajlm-1122	108	20	pi	pi	NOUN
ajlm-1122	108	21	)	)	PUNCT
ajlm-1122	108	22	ranges	range	NOUN
ajlm-1122	108	23	(	(	PUNCT
ajlm-1122	108	24	majority	majority	NOUN
ajlm-1122	108	25	above	above	ADP
ajlm-1122	108	26	pi	pi	PROPN
ajlm-1122	108	27	4	4	NUM
ajlm-1122	108	28	and	and	CCONJ
ajlm-1122	108	29	below	below	ADP
ajlm-1122	108	30	pi	pi	NOUN
ajlm-1122	108	31	7	7	NUM
ajlm-1122	108	32	)	)	PUNCT
ajlm-1122	108	33	(	(	PUNCT
ajlm-1122	108	34	figure	figure	VERB
ajlm-1122	108	35	4c	4c	NOUN
ajlm-1122	108	36	)	)	PUNCT
ajlm-1122	108	37	of	of	ADP
ajlm-1122	108	38	identified	identify	VERB
ajlm-1122	108	39	peptides	peptide	NOUN
ajlm-1122	108	40	were	be	AUX
ajlm-1122	108	41	overall	overall	ADJ
ajlm-1122	108	42	similar	similar	ADJ
ajlm-1122	108	43	for	for	ADP
ajlm-1122	108	44	all	all	DET
ajlm-1122	108	45	samples	sample	NOUN
ajlm-1122	108	46	and	and	CCONJ
ajlm-1122	108	47	experimental	experimental	ADJ
ajlm-1122	108	48	groups	group	NOUN
ajlm-1122	108	49	compared	compare	VERB
ajlm-1122	108	50	.	.	PUNCT
ajlm-1122	109	1	figure	figure	VERB
ajlm-1122	109	2	4	4	NUM
ajlm-1122	109	3	:	:	PUNCT
ajlm-1122	109	4	physicochemical	physicochemical	ADJ
ajlm-1122	109	5	properties	property	NOUN
ajlm-1122	109	6	of	of	ADP
ajlm-1122	109	7	peptides	peptide	NOUN
ajlm-1122	109	8	extracted	extract	VERB
ajlm-1122	109	9	under	under	ADP
ajlm-1122	109	10	the	the	DET
ajlm-1122	109	11	different	different	ADJ
ajlm-1122	109	12	experimental	experimental	ADJ
ajlm-1122	109	13	conditions	condition	NOUN
ajlm-1122	109	14	at	at	ADP
ajlm-1122	109	15	the	the	DET
ajlm-1122	109	16	south	south	ADJ
ajlm-1122	109	17	african	african	ADJ
ajlm-1122	109	18	national	national	PROPN
ajlm-1122	109	19	bioinformatics	bioinformatics	PROPN
ajlm-1122	109	20	institute	institute	PROPN
ajlm-1122	109	21	,	,	PUNCT
ajlm-1122	109	22	university	university	NOUN
ajlm-1122	109	23	of	of	ADP
ajlm-1122	109	24	the	the	DET
ajlm-1122	109	25	western	western	ADJ
ajlm-1122	109	26	cape	cape	NOUN
ajlm-1122	109	27	,	,	PUNCT
ajlm-1122	109	28	bellville	bellville	PROPN
ajlm-1122	109	29	,	,	PUNCT
ajlm-1122	109	30	south	south	PROPN
ajlm-1122	109	31	africa	africa	PROPN
ajlm-1122	109	32	,	,	PUNCT
ajlm-1122	109	33	from	from	ADP
ajlm-1122	109	34	august	august	PROPN
ajlm-1122	109	35	2017	2017	NUM
ajlm-1122	109	36	to	to	ADP
ajlm-1122	109	37	july	july	PROPN
ajlm-1122	109	38	2019	2019	NUM
ajlm-1122	109	39	.	.	PUNCT
ajlm-1122	110	1	(	(	PUNCT
ajlm-1122	110	2	a	a	X
ajlm-1122	110	3	)	)	PUNCT
ajlm-1122	110	4	hydropathicity	hydropathicity	NOUN
ajlm-1122	110	5	was	be	AUX
ajlm-1122	110	6	based	base	VERB
ajlm-1122	110	7	on	on	ADP
ajlm-1122	110	8	kyte	kyte	PROPN
ajlm-1122	110	9	and	and	CCONJ
ajlm-1122	110	10	doolittle	doolittle	PROPN
ajlm-1122	110	11	’s	’s	PART
ajlm-1122	110	12	(	(	PUNCT
ajlm-1122	110	13	1982	1982	NUM
ajlm-1122	110	14	)	)	PUNCT
ajlm-1122	110	15	grand	grand	ADJ
ajlm-1122	110	16	average	average	NOUN
ajlm-1122	110	17	of	of	ADP
ajlm-1122	110	18	hydropathy	hydropathy	ADJ
ajlm-1122	110	19	(	(	PUNCT
ajlm-1122	110	20	gravy	gravy	NOUN
ajlm-1122	110	21	)	)	PUNCT
ajlm-1122	110	22	scoring	scoring	NOUN
ajlm-1122	110	23	matrix	matrix	NOUN
ajlm-1122	110	24	.	.	PUNCT
ajlm-1122	111	1	(	(	PUNCT
ajlm-1122	111	2	b	b	X
ajlm-1122	111	3	)	)	PUNCT
ajlm-1122	111	4	molecular	molecular	ADJ
ajlm-1122	111	5	weight	weight	NOUN
ajlm-1122	111	6	.	.	PUNCT
ajlm-1122	112	1	(	(	PUNCT
ajlm-1122	112	2	c	c	X
ajlm-1122	112	3	)	)	PUNCT
ajlm-1122	112	4	isolectric	isolectric	ADJ
ajlm-1122	112	5	point	point	NOUN
ajlm-1122	112	6	(	(	PUNCT
ajlm-1122	112	7	pi	pi	NOUN
ajlm-1122	112	8	)	)	PUNCT
ajlm-1122	112	9	.	.	PUNCT
ajlm-1122	113	1	(	(	PUNCT
ajlm-1122	113	2	–	–	PUNCT
ajlm-1122	113	3	peg	peg	NOUN
ajlm-1122	113	4	)	)	PUNCT
ajlm-1122	113	5	refers	refer	VERB
ajlm-1122	113	6	to	to	ADP
ajlm-1122	113	7	protein	protein	NOUN
ajlm-1122	113	8	extracted	extract	VERB
ajlm-1122	113	9	without	without	ADP
ajlm-1122	113	10	peg	peg	NOUN
ajlm-1122	113	11	and	and	CCONJ
ajlm-1122	113	12	(	(	PUNCT
ajlm-1122	113	13	+	+	NOUN
ajlm-1122	113	14	peg	peg	NOUN
ajlm-1122	113	15	)	)	PUNCT
ajlm-1122	113	16	refers	refer	VERB
ajlm-1122	113	17	to	to	ADP
ajlm-1122	113	18	protein	protein	NOUN
ajlm-1122	113	19	extracted	extract	VERB
ajlm-1122	113	20	with	with	ADP
ajlm-1122	113	21	peg	peg	NOUN
ajlm-1122	113	22	.	.	PUNCT
ajlm-1122	114	1	red	red	ADJ
ajlm-1122	114	2	boxplots	boxplot	NOUN
ajlm-1122	114	3	refer	refer	VERB
ajlm-1122	114	4	to	to	PART
ajlm-1122	114	5	pellet	pellet	NOUN
ajlm-1122	114	6	samples	sample	NOUN
ajlm-1122	114	7	extracted	extract	VERB
ajlm-1122	114	8	with	with	ADP
ajlm-1122	114	9	peg	peg	NOUN
ajlm-1122	114	10	;	;	PUNCT
ajlm-1122	114	11	purple	purple	ADJ
ajlm-1122	114	12	boxplots	boxplot	NOUN
ajlm-1122	114	13	refer	refer	VERB
ajlm-1122	114	14	to	to	PART
ajlm-1122	114	15	pellet	pellet	NOUN
ajlm-1122	114	16	samples	sample	NOUN
ajlm-1122	114	17	extracted	extract	VERB
ajlm-1122	114	18	without	without	ADP
ajlm-1122	114	19	peg	peg	NOUN
ajlm-1122	114	20	;	;	PUNCT
ajlm-1122	114	21	blue	blue	ADJ
ajlm-1122	114	22	boxplots	boxplot	NOUN
ajlm-1122	114	23	refer	refer	VERB
ajlm-1122	114	24	to	to	AUX
ajlm-1122	114	25	wcpl	wcpl	VERB
ajlm-1122	114	26	samples	sample	NOUN
ajlm-1122	114	27	extracted	extract	VERB
ajlm-1122	114	28	with	with	ADP
ajlm-1122	114	29	peg	peg	NOUN
ajlm-1122	114	30	;	;	PUNCT
ajlm-1122	114	31	green	green	ADJ
ajlm-1122	114	32	boxplots	boxplot	NOUN
ajlm-1122	114	33	refer	refer	VERB
ajlm-1122	114	34	to	to	AUX
ajlm-1122	114	35	wcpl	wcpl	VERB
ajlm-1122	114	36	samples	sample	NOUN
ajlm-1122	114	37	extracted	extract	VERB
ajlm-1122	114	38	without	without	ADP
ajlm-1122	114	39	peg	peg	NOUN
ajlm-1122	114	40	.	.	PUNCT
ajlm-1122	115	1	overall	overall	ADJ
ajlm-1122	115	2	,	,	PUNCT
ajlm-1122	115	3	similar	similar	ADJ
ajlm-1122	115	4	go	go	VERB
ajlm-1122	115	5	functional	functional	ADJ
ajlm-1122	115	6	annotation	annotation	NOUN
ajlm-1122	115	7	profiles	profile	NOUN
ajlm-1122	115	8	were	be	AUX
ajlm-1122	115	9	obtained	obtain	VERB
ajlm-1122	115	10	for	for	ADP
ajlm-1122	115	11	all	all	DET
ajlm-1122	115	12	samples	sample	NOUN
ajlm-1122	115	13	(	(	PUNCT
ajlm-1122	115	14	figure	figure	NOUN
ajlm-1122	115	15	5	5	NUM
ajlm-1122	115	16	)	)	PUNCT
ajlm-1122	115	17	.	.	PUNCT
ajlm-1122	116	1	the	the	DET
ajlm-1122	116	2	majority	majority	NOUN
ajlm-1122	116	3	of	of	ADP
ajlm-1122	116	4	proteins	protein	NOUN
ajlm-1122	116	5	were	be	AUX
ajlm-1122	116	6	preferentially	preferentially	ADV
ajlm-1122	116	7	extracted	extract	VERB
ajlm-1122	116	8	from	from	ADP
ajlm-1122	116	9	the	the	DET
ajlm-1122	116	10	cytoplasm	cytoplasm	NOUN
ajlm-1122	116	11	(	(	PUNCT
ajlm-1122	116	12	<	<	X
ajlm-1122	116	13	90	90	NUM
ajlm-1122	116	14	%	%	NOUN
ajlm-1122	116	15	)	)	PUNCT
ajlm-1122	116	16	,	,	PUNCT
ajlm-1122	116	17	organelles	organelle	NOUN
ajlm-1122	116	18	(	(	PUNCT
ajlm-1122	116	19	>	>	X
ajlm-1122	116	20	90	90	NUM
ajlm-1122	116	21	%	%	NOUN
ajlm-1122	116	22	)	)	PUNCT
ajlm-1122	116	23	,	,	PUNCT
ajlm-1122	116	24	intracellular	intracellular	ADJ
ajlm-1122	116	25	region	region	NOUN
ajlm-1122	116	26	(	(	PUNCT
ajlm-1122	116	27	>	>	X
ajlm-1122	116	28	90	90	NUM
ajlm-1122	116	29	%	%	NOUN
ajlm-1122	116	30	)	)	PUNCT
ajlm-1122	116	31	and	and	CCONJ
ajlm-1122	116	32	extracellular	extracellular	ADJ
ajlm-1122	116	33	region	region	NOUN
ajlm-1122	116	34	(	(	PUNCT
ajlm-1122	116	35	>	>	X
ajlm-1122	116	36	60	60	NUM
ajlm-1122	116	37	%	%	NOUN
ajlm-1122	116	38	)	)	PUNCT
ajlm-1122	116	39	.	.	PUNCT
ajlm-1122	117	1	figure	figure	VERB
ajlm-1122	117	2	5	5	NUM
ajlm-1122	117	3	:	:	PUNCT
ajlm-1122	117	4	gene	gene	NOUN
ajlm-1122	117	5	ontology	ontology	NOUN
ajlm-1122	117	6	annotation	annotation	NOUN
ajlm-1122	117	7	profiles	profile	NOUN
ajlm-1122	117	8	according	accord	VERB
ajlm-1122	117	9	to	to	ADP
ajlm-1122	117	10	subcellular	subcellular	ADJ
ajlm-1122	117	11	localisation	localisation	NOUN
ajlm-1122	117	12	for	for	ADP
ajlm-1122	117	13	proteins	protein	NOUN
ajlm-1122	117	14	identified	identify	VERB
ajlm-1122	117	15	from	from	ADP
ajlm-1122	117	16	all	all	DET
ajlm-1122	117	17	samples	sample	NOUN
ajlm-1122	117	18	and	and	CCONJ
ajlm-1122	117	19	conditions	condition	NOUN
ajlm-1122	117	20	at	at	ADP
ajlm-1122	117	21	the	the	DET
ajlm-1122	117	22	south	south	ADJ
ajlm-1122	117	23	african	african	ADJ
ajlm-1122	117	24	national	national	PROPN
ajlm-1122	117	25	bioinformatics	bioinformatics	PROPN
ajlm-1122	117	26	institute	institute	PROPN
ajlm-1122	117	27	,	,	PUNCT
ajlm-1122	117	28	university	university	NOUN
ajlm-1122	117	29	of	of	ADP
ajlm-1122	117	30	the	the	DET
ajlm-1122	117	31	western	western	ADJ
ajlm-1122	117	32	cape	cape	NOUN
ajlm-1122	117	33	,	,	PUNCT
ajlm-1122	117	34	bellville	bellville	PROPN
ajlm-1122	117	35	,	,	PUNCT
ajlm-1122	117	36	south	south	PROPN
ajlm-1122	117	37	africa	africa	PROPN
ajlm-1122	117	38	,	,	PUNCT
ajlm-1122	117	39	from	from	ADP
ajlm-1122	117	40	august	august	PROPN
ajlm-1122	117	41	2017	2017	NUM
ajlm-1122	117	42	to	to	ADP
ajlm-1122	117	43	july	july	PROPN
ajlm-1122	117	44	2019	2019	NUM
ajlm-1122	117	45	.	.	PUNCT
ajlm-1122	118	1	the	the	DET
ajlm-1122	118	2	average	average	ADJ
ajlm-1122	118	3	percentages	percentage	NOUN
ajlm-1122	118	4	of	of	ADP
ajlm-1122	118	5	occurrence	occurrence	NOUN
ajlm-1122	118	6	of	of	ADP
ajlm-1122	118	7	go	go	VERB
ajlm-1122	118	8	terms	term	NOUN
ajlm-1122	118	9	for	for	ADP
ajlm-1122	118	10	all	all	DET
ajlm-1122	118	11	three	three	NUM
ajlm-1122	118	12	patients	patient	NOUN
ajlm-1122	118	13	(	(	PUNCT
ajlm-1122	118	14	per	per	ADP
ajlm-1122	118	15	experimental	experimental	ADJ
ajlm-1122	118	16	group	group	NOUN
ajlm-1122	118	17	)	)	PUNCT
ajlm-1122	118	18	are	be	AUX
ajlm-1122	118	19	displayed	display	VERB
ajlm-1122	118	20	with	with	ADP
ajlm-1122	118	21	error	error	NOUN
ajlm-1122	118	22	bars	bar	NOUN
ajlm-1122	118	23	showing	show	VERB
ajlm-1122	118	24	standard	standard	ADJ
ajlm-1122	118	25	deviation	deviation	NOUN
ajlm-1122	118	26	(	(	PUNCT
ajlm-1122	118	27	significance	significance	NOUN
ajlm-1122	118	28	level	level	NOUN
ajlm-1122	118	29	=	=	NOUN
ajlm-1122	118	30	0.05	0.05	NUM
ajlm-1122	118	31	)	)	PUNCT
ajlm-1122	118	32	.	.	PUNCT
ajlm-1122	119	1	(	(	PUNCT
ajlm-1122	119	2	–	–	PUNCT
ajlm-1122	119	3	peg	peg	NOUN
ajlm-1122	119	4	)	)	PUNCT
ajlm-1122	119	5	refers	refer	VERB
ajlm-1122	119	6	to	to	ADP
ajlm-1122	119	7	protein	protein	NOUN
ajlm-1122	119	8	extracted	extract	VERB
ajlm-1122	119	9	without	without	ADP
ajlm-1122	119	10	peg	peg	NOUN
ajlm-1122	119	11	and	and	CCONJ
ajlm-1122	119	12	(	(	PUNCT
ajlm-1122	119	13	+	+	NOUN
ajlm-1122	119	14	peg	peg	NOUN
ajlm-1122	119	15	)	)	PUNCT
ajlm-1122	119	16	refers	refer	VERB
ajlm-1122	119	17	to	to	ADP
ajlm-1122	119	18	protein	protein	NOUN
ajlm-1122	119	19	extracted	extract	VERB
ajlm-1122	119	20	with	with	ADP
ajlm-1122	119	21	peg	peg	NOUN
ajlm-1122	119	22	.	.	PUNCT
ajlm-1122	120	1	red	red	ADJ
ajlm-1122	120	2	bar	bar	NOUN
ajlm-1122	120	3	graphs	graph	NOUN
ajlm-1122	120	4	refer	refer	VERB
ajlm-1122	120	5	to	to	PART
ajlm-1122	120	6	pellet	pellet	NOUN
ajlm-1122	120	7	samples	sample	NOUN
ajlm-1122	120	8	extracted	extract	VERB
ajlm-1122	120	9	with	with	ADP
ajlm-1122	120	10	peg	peg	NOUN
ajlm-1122	120	11	;	;	PUNCT
ajlm-1122	120	12	purple	purple	ADJ
ajlm-1122	120	13	bar	bar	NOUN
ajlm-1122	120	14	graphs	graph	NOUN
ajlm-1122	120	15	refer	refer	VERB
ajlm-1122	120	16	to	to	PART
ajlm-1122	120	17	pellet	pellet	NOUN
ajlm-1122	120	18	samples	sample	NOUN
ajlm-1122	120	19	extracted	extract	VERB
ajlm-1122	120	20	without	without	ADP
ajlm-1122	120	21	peg	peg	NOUN
ajlm-1122	120	22	;	;	PUNCT
ajlm-1122	120	23	blue	blue	ADJ
ajlm-1122	120	24	bar	bar	NOUN
ajlm-1122	120	25	graphs	graph	NOUN
ajlm-1122	120	26	refer	refer	VERB
ajlm-1122	120	27	to	to	AUX
ajlm-1122	120	28	wcpl	wcpl	VERB
ajlm-1122	120	29	samples	sample	NOUN
ajlm-1122	120	30	extracted	extract	VERB
ajlm-1122	120	31	with	with	ADP
ajlm-1122	120	32	peg	peg	NOUN
ajlm-1122	120	33	;	;	PUNCT
ajlm-1122	120	34	green	green	ADJ
ajlm-1122	120	35	bar	bar	NOUN
ajlm-1122	120	36	graphs	graph	NOUN
ajlm-1122	120	37	refer	refer	VERB
ajlm-1122	120	38	to	to	AUX
ajlm-1122	120	39	wcpl	wcpl	VERB
ajlm-1122	120	40	samples	sample	NOUN
ajlm-1122	120	41	extracted	extract	VERB
ajlm-1122	120	42	without	without	ADP
ajlm-1122	120	43	peg	peg	NOUN
ajlm-1122	120	44	.	.	PUNCT
ajlm-1122	121	1	assessment	assessment	NOUN
ajlm-1122	121	2	of	of	ADP
ajlm-1122	121	3	sample	sample	NOUN
ajlm-1122	121	4	preparation	preparation	NOUN
ajlm-1122	121	5	method	method	NOUN
ajlm-1122	121	6	reproducibility	reproducibility	NOUN
ajlm-1122	121	7	and	and	CCONJ
ajlm-1122	121	8	trypsin	trypsin	NOUN
ajlm-1122	121	9	digestion	digestion	NOUN
ajlm-1122	121	10	efficiency	efficiency	NOUN
ajlm-1122	121	11	all	all	DET
ajlm-1122	121	12	samples	sample	NOUN
ajlm-1122	121	13	had	have	VERB
ajlm-1122	121	14	a	a	DET
ajlm-1122	121	15	majority	majority	NOUN
ajlm-1122	121	16	(	(	PUNCT
ajlm-1122	121	17	>	>	X
ajlm-1122	121	18	80	80	NUM
ajlm-1122	121	19	%	%	NOUN
ajlm-1122	121	20	)	)	PUNCT
ajlm-1122	121	21	of	of	ADP
ajlm-1122	121	22	fully	fully	ADV
ajlm-1122	121	23	cleaved	cleaved	ADJ
ajlm-1122	121	24	peptides	peptide	NOUN
ajlm-1122	121	25	(	(	PUNCT
ajlm-1122	121	26	0	0	NUM
ajlm-1122	121	27	missed	miss	VERB
ajlm-1122	121	28	cleavages	cleavage	NOUN
ajlm-1122	121	29	)	)	PUNCT
ajlm-1122	121	30	,	,	PUNCT
ajlm-1122	121	31	with	with	ADP
ajlm-1122	121	32	approximately	approximately	ADV
ajlm-1122	121	33	<	<	X
ajlm-1122	121	34	20	20	NUM
ajlm-1122	121	35	%	%	NOUN
ajlm-1122	121	36	peptides	peptide	NOUN
ajlm-1122	121	37	with	with	ADP
ajlm-1122	121	38	1	1	NUM
ajlm-1122	121	39	missed	missed	ADJ
ajlm-1122	121	40	cleavage	cleavage	NOUN
ajlm-1122	121	41	,	,	PUNCT
ajlm-1122	121	42	and	and	CCONJ
ajlm-1122	121	43	approximately	approximately	ADV
ajlm-1122	121	44	<	<	X
ajlm-1122	121	45	5	5	NUM
ajlm-1122	121	46	%	%	NOUN
ajlm-1122	121	47	peptides	peptide	NOUN
ajlm-1122	121	48	with	with	ADP
ajlm-1122	121	49	2	2	NUM
ajlm-1122	121	50	missed	missed	ADJ
ajlm-1122	121	51	cleavages	cleavage	NOUN
ajlm-1122	121	52	(	(	PUNCT
ajlm-1122	121	53	figure	figure	NOUN
ajlm-1122	121	54	6	6	NUM
ajlm-1122	121	55	)	)	PUNCT
ajlm-1122	121	56	.	.	PUNCT
ajlm-1122	122	1	in	in	ADP
ajlm-1122	122	2	addition	addition	NOUN
ajlm-1122	122	3	,	,	PUNCT
ajlm-1122	122	4	the	the	DET
ajlm-1122	122	5	hilic	hilic	NOUN
ajlm-1122	122	6	/	/	SYM
ajlm-1122	122	7	sp3	sp3	NOUN
ajlm-1122	122	8	sample	sample	NOUN
ajlm-1122	122	9	preparation	preparation	NOUN
ajlm-1122	122	10	method	method	NOUN
ajlm-1122	122	11	shows	show	VERB
ajlm-1122	122	12	a	a	DET
ajlm-1122	122	13	similar	similar	ADJ
ajlm-1122	122	14	range	range	NOUN
ajlm-1122	122	15	of	of	ADP
ajlm-1122	122	16	missed	miss	VERB
ajlm-1122	122	17	cleavages	cleavage	NOUN
ajlm-1122	122	18	in	in	ADP
ajlm-1122	122	19	all	all	DET
ajlm-1122	122	20	samples	sample	NOUN
ajlm-1122	122	21	and	and	CCONJ
ajlm-1122	122	22	experimental	experimental	ADJ
ajlm-1122	122	23	conditions	condition	NOUN
ajlm-1122	122	24	analysed	analyse	VERB
ajlm-1122	122	25	.	.	PUNCT
ajlm-1122	123	1	figure	figure	VERB
ajlm-1122	123	2	6	6	NUM
ajlm-1122	123	3	:	:	PUNCT
ajlm-1122	123	4	numbers	number	NOUN
ajlm-1122	123	5	of	of	ADP
ajlm-1122	123	6	missed	missed	ADJ
ajlm-1122	123	7	cleavages	cleavage	NOUN
ajlm-1122	123	8	for	for	ADP
ajlm-1122	123	9	all	all	DET
ajlm-1122	123	10	samples	sample	NOUN
ajlm-1122	123	11	at	at	ADP
ajlm-1122	123	12	the	the	DET
ajlm-1122	123	13	south	south	ADJ
ajlm-1122	123	14	african	african	ADJ
ajlm-1122	123	15	national	national	PROPN
ajlm-1122	123	16	bioinformatics	bioinformatics	PROPN
ajlm-1122	123	17	institute	institute	PROPN
ajlm-1122	123	18	,	,	PUNCT
ajlm-1122	123	19	university	university	NOUN
ajlm-1122	123	20	of	of	ADP
ajlm-1122	123	21	the	the	DET
ajlm-1122	123	22	western	western	ADJ
ajlm-1122	123	23	cape	cape	NOUN
ajlm-1122	123	24	,	,	PUNCT
ajlm-1122	123	25	bellville	bellville	PROPN
ajlm-1122	123	26	,	,	PUNCT
ajlm-1122	123	27	south	south	PROPN
ajlm-1122	123	28	africa	africa	PROPN
ajlm-1122	123	29	,	,	PUNCT
ajlm-1122	123	30	from	from	ADP
ajlm-1122	123	31	august	august	PROPN
ajlm-1122	123	32	2017	2017	NUM
ajlm-1122	123	33	to	to	ADP
ajlm-1122	123	34	july	july	PROPN
ajlm-1122	123	35	2019	2019	NUM
ajlm-1122	123	36	.	.	PUNCT
ajlm-1122	124	1	for	for	ADP
ajlm-1122	124	2	each	each	DET
ajlm-1122	124	3	sample	sample	NOUN
ajlm-1122	124	4	,	,	PUNCT
ajlm-1122	124	5	the	the	DET
ajlm-1122	124	6	percentage	percentage	NOUN
ajlm-1122	124	7	of	of	ADP
ajlm-1122	124	8	missed	miss	VERB
ajlm-1122	124	9	cleavages	cleavage	NOUN
ajlm-1122	124	10	is	be	AUX
ajlm-1122	124	11	shown	show	VERB
ajlm-1122	124	12	.	.	PUNCT
ajlm-1122	125	1	(	(	PUNCT
ajlm-1122	125	2	–	–	PUNCT
ajlm-1122	125	3	peg	peg	NOUN
ajlm-1122	125	4	)	)	PUNCT
ajlm-1122	125	5	refers	refer	VERB
ajlm-1122	125	6	to	to	ADP
ajlm-1122	125	7	protein	protein	NOUN
ajlm-1122	125	8	extracted	extract	VERB
ajlm-1122	125	9	without	without	ADP
ajlm-1122	125	10	peg	peg	NOUN
ajlm-1122	125	11	and	and	CCONJ
ajlm-1122	125	12	(	(	PUNCT
ajlm-1122	125	13	+	+	NOUN
ajlm-1122	125	14	peg	peg	NOUN
ajlm-1122	125	15	)	)	PUNCT
ajlm-1122	125	16	refers	refer	VERB
ajlm-1122	125	17	to	to	ADP
ajlm-1122	125	18	protein	protein	NOUN
ajlm-1122	125	19	extracted	extract	VERB
ajlm-1122	125	20	with	with	ADP
ajlm-1122	125	21	peg	peg	NOUN
ajlm-1122	125	22	.	.	PUNCT
ajlm-1122	126	1	discussion	discussion	NOUN
ajlm-1122	126	2	in	in	ADP
ajlm-1122	126	3	this	this	DET
ajlm-1122	126	4	present	present	ADJ
ajlm-1122	126	5	study	study	NOUN
ajlm-1122	126	6	,	,	PUNCT
ajlm-1122	126	7	the	the	DET
ajlm-1122	126	8	samples	sample	NOUN
ajlm-1122	126	9	processed	process	VERB
ajlm-1122	126	10	using	use	VERB
ajlm-1122	126	11	peg	peg	NOUN
ajlm-1122	126	12	in	in	ADP
ajlm-1122	126	13	the	the	DET
ajlm-1122	126	14	protein	protein	NOUN
ajlm-1122	126	15	extraction	extraction	NOUN
ajlm-1122	126	16	buffer	buffer	NOUN
ajlm-1122	126	17	had	have	VERB
ajlm-1122	126	18	overall	overall	ADV
ajlm-1122	126	19	lower	low	ADJ
ajlm-1122	126	20	peptide	peptide	NOUN
ajlm-1122	126	21	and	and	CCONJ
ajlm-1122	126	22	protein	protein	NOUN
ajlm-1122	126	23	identifications	identification	NOUN
ajlm-1122	126	24	.	.	PUNCT
ajlm-1122	127	1	using	use	VERB
ajlm-1122	127	2	hela	hela	ADJ
ajlm-1122	127	3	cells	cell	NOUN
ajlm-1122	127	4	,	,	PUNCT
ajlm-1122	127	5	wiśniewski13	wiśniewski13	PROPN
ajlm-1122	127	6	found	find	VERB
ajlm-1122	127	7	that	that	SCONJ
ajlm-1122	127	8	the	the	DET
ajlm-1122	127	9	addition	addition	NOUN
ajlm-1122	127	10	of	of	ADP
ajlm-1122	127	11	peg	peg	NOUN
ajlm-1122	127	12	to	to	ADP
ajlm-1122	127	13	the	the	DET
ajlm-1122	127	14	protein	protein	NOUN
ajlm-1122	127	15	extraction	extraction	NOUN
ajlm-1122	127	16	buffer	buffer	NOUN
ajlm-1122	127	17	improves	improve	VERB
ajlm-1122	127	18	protein	protein	NOUN
ajlm-1122	127	19	extraction	extraction	NOUN
ajlm-1122	127	20	efficiency	efficiency	NOUN
ajlm-1122	127	21	of	of	ADP
ajlm-1122	127	22	samples	sample	NOUN
ajlm-1122	127	23	that	that	PRON
ajlm-1122	127	24	contained	contain	VERB
ajlm-1122	127	25	sub	sub	NOUN
ajlm-1122	127	26	-	-	ADJ
ajlm-1122	127	27	microgram	microgram	ADJ
ajlm-1122	127	28	to	to	ADP
ajlm-1122	127	29	microgram	microgram	ADJ
ajlm-1122	127	30	amounts	amount	NOUN
ajlm-1122	127	31	of	of	ADP
ajlm-1122	127	32	protein	protein	NOUN
ajlm-1122	127	33	.	.	PUNCT
ajlm-1122	128	1	however	however	ADV
ajlm-1122	128	2	,	,	PUNCT
ajlm-1122	128	3	peg	peg	NOUN
ajlm-1122	128	4	’s	’s	PART
ajlm-1122	128	5	ability	ability	NOUN
ajlm-1122	128	6	to	to	PART
ajlm-1122	128	7	improve	improve	VERB
ajlm-1122	128	8	protein	protein	NOUN
ajlm-1122	128	9	extraction	extraction	NOUN
ajlm-1122	128	10	efficiency	efficiency	NOUN
ajlm-1122	128	11	was	be	AUX
ajlm-1122	128	12	compromised	compromise	VERB
ajlm-1122	128	13	when	when	SCONJ
ajlm-1122	128	14	processing	processing	NOUN
ajlm-1122	128	15	cell	cell	NOUN
ajlm-1122	128	16	lysates	lysate	NOUN
ajlm-1122	128	17	that	that	PRON
ajlm-1122	128	18	contained	contain	VERB
ajlm-1122	128	19	more	more	ADJ
ajlm-1122	128	20	than	than	ADP
ajlm-1122	128	21	10	10	NUM
ajlm-1122	128	22	µg	µg	ADP
ajlm-1122	128	23	of	of	ADP
ajlm-1122	128	24	protein	protein	NOUN
ajlm-1122	128	25	.	.	PUNCT
ajlm-1122	129	1	furthermore	furthermore	ADV
ajlm-1122	129	2	,	,	PUNCT
ajlm-1122	129	3	shen3	shen3	PROPN
ajlm-1122	129	4	found	find	VERB
ajlm-1122	129	5	that	that	SCONJ
ajlm-1122	129	6	the	the	DET
ajlm-1122	129	7	addition	addition	NOUN
ajlm-1122	129	8	of	of	ADP
ajlm-1122	129	9	peg	peg	NOUN
ajlm-1122	129	10	to	to	PART
ajlm-1122	129	11	ffpe	ffpe	VERB
ajlm-1122	129	12	rat	rat	NOUN
ajlm-1122	129	13	tissues	tissue	NOUN
ajlm-1122	129	14	,	,	PUNCT
ajlm-1122	129	15	which	which	PRON
ajlm-1122	129	16	contain	contain	VERB
ajlm-1122	129	17	>	>	X
ajlm-1122	129	18	10	10	NUM
ajlm-1122	129	19	µg	µg	ADV
ajlm-1122	129	20	protein	protein	NOUN
ajlm-1122	129	21	,	,	PUNCT
ajlm-1122	129	22	failed	fail	VERB
ajlm-1122	129	23	to	to	PART
ajlm-1122	129	24	increase	increase	VERB
ajlm-1122	129	25	the	the	DET
ajlm-1122	129	26	amount	amount	NOUN
ajlm-1122	129	27	of	of	ADP
ajlm-1122	129	28	peptide	peptide	NOUN
ajlm-1122	129	29	and	and	CCONJ
ajlm-1122	129	30	protein	protein	NOUN
ajlm-1122	129	31	identifications	identification	NOUN
ajlm-1122	129	32	.	.	PUNCT
ajlm-1122	130	1	as	as	SCONJ
ajlm-1122	130	2	our	our	PRON
ajlm-1122	130	3	study	study	NOUN
ajlm-1122	130	4	extracted	extract	VERB
ajlm-1122	130	5	protein	protein	NOUN
ajlm-1122	130	6	in	in	ADP
ajlm-1122	130	7	the	the	DET
ajlm-1122	130	8	range	range	NOUN
ajlm-1122	130	9	of	of	ADP
ajlm-1122	130	10	approximately	approximately	ADV
ajlm-1122	130	11	400	400	NUM
ajlm-1122	130	12	µg	µg	ADV
ajlm-1122	130	13	–	–	PUNCT
ajlm-1122	130	14	900	900	NUM
ajlm-1122	130	15	µg	µg	NOUN
ajlm-1122	130	16	per	per	ADP
ajlm-1122	130	17	sample	sample	NOUN
ajlm-1122	130	18	(	(	PUNCT
ajlm-1122	130	19	supplementary	supplementary	ADJ
ajlm-1122	130	20	document	document	NOUN
ajlm-1122	130	21	–	–	PUNCT
ajlm-1122	130	22	table	table	NOUN
ajlm-1122	130	23	s2	s2	PROPN
ajlm-1122	130	24	)	)	PUNCT
ajlm-1122	130	25	,	,	PUNCT
ajlm-1122	130	26	it	it	PRON
ajlm-1122	130	27	would	would	AUX
ajlm-1122	130	28	explain	explain	VERB
ajlm-1122	130	29	why	why	SCONJ
ajlm-1122	130	30	peg	peg	NOUN
ajlm-1122	130	31	’s	’s	PART
ajlm-1122	130	32	extraction	extraction	NOUN
ajlm-1122	130	33	efficiency	efficiency	NOUN
ajlm-1122	130	34	was	be	AUX
ajlm-1122	130	35	compromised	compromise	VERB
ajlm-1122	130	36	and	and	CCONJ
ajlm-1122	130	37	resulted	result	VERB
ajlm-1122	130	38	in	in	ADP
ajlm-1122	130	39	lower	low	ADJ
ajlm-1122	130	40	overall	overall	ADJ
ajlm-1122	130	41	peptide	peptide	NOUN
ajlm-1122	130	42	and	and	CCONJ
ajlm-1122	130	43	protein	protein	NOUN
ajlm-1122	130	44	identifications	identification	NOUN
ajlm-1122	130	45	.	.	PUNCT
ajlm-1122	131	1	the	the	DET
ajlm-1122	131	2	number	number	NOUN
ajlm-1122	131	3	of	of	ADP
ajlm-1122	131	4	peptide	peptide	NOUN
ajlm-1122	131	5	(	(	PUNCT
ajlm-1122	131	6	6840–7058	6840–7058	NUM
ajlm-1122	131	7	)	)	PUNCT
ajlm-1122	131	8	and	and	CCONJ
ajlm-1122	131	9	protein	protein	NOUN
ajlm-1122	131	10	(	(	PUNCT
ajlm-1122	131	11	2302–2314	2302–2314	NUM
ajlm-1122	131	12	)	)	PUNCT
ajlm-1122	131	13	identifications	identification	NOUN
ajlm-1122	131	14	reported	report	VERB
ajlm-1122	131	15	here	here	ADV
ajlm-1122	131	16	for	for	ADP
ajlm-1122	131	17	the	the	DET
ajlm-1122	131	18	wcpls	wcpls	NOUN
ajlm-1122	131	19	fall	fall	VERB
ajlm-1122	131	20	within	within	ADP
ajlm-1122	131	21	the	the	DET
ajlm-1122	131	22	range	range	NOUN
ajlm-1122	131	23	of	of	ADP
ajlm-1122	131	24	previously	previously	ADV
ajlm-1122	131	25	published	publish	VERB
ajlm-1122	131	26	studies	study	NOUN
ajlm-1122	131	27	and	and	CCONJ
ajlm-1122	131	28	are	be	AUX
ajlm-1122	131	29	higher	high	ADJ
ajlm-1122	131	30	than	than	ADP
ajlm-1122	131	31	those	those	PRON
ajlm-1122	131	32	reported	report	VERB
ajlm-1122	131	33	by	by	ADP
ajlm-1122	131	34	sprung40	sprung40	NOUN
ajlm-1122	131	35	(	(	PUNCT
ajlm-1122	131	36	approximately	approximately	ADV
ajlm-1122	131	37	400–500	400–500	NUM
ajlm-1122	131	38	protein	protein	NOUN
ajlm-1122	131	39	groups	group	NOUN
ajlm-1122	131	40	identified	identify	VERB
ajlm-1122	131	41	for	for	ADP
ajlm-1122	131	42	triplicate	triplicate	NOUN
ajlm-1122	131	43	samples	sample	NOUN
ajlm-1122	131	44	)	)	PUNCT
ajlm-1122	131	45	.	.	PUNCT
ajlm-1122	132	1	craven41	craven41	PROPN
ajlm-1122	132	2	identified	identify	VERB
ajlm-1122	132	3	between	between	ADP
ajlm-1122	132	4	1335	1335	NUM
ajlm-1122	132	5	and	and	CCONJ
ajlm-1122	132	6	1945	1945	NUM
ajlm-1122	132	7	proteins	protein	NOUN
ajlm-1122	132	8	on	on	ADP
ajlm-1122	132	9	average	average	NOUN
ajlm-1122	132	10	for	for	ADP
ajlm-1122	132	11	four	four	NUM
ajlm-1122	132	12	biological	biological	ADJ
ajlm-1122	132	13	replicates	replicate	NOUN
ajlm-1122	132	14	,	,	PUNCT
ajlm-1122	132	15	as	as	ADV
ajlm-1122	132	16	well	well	ADV
ajlm-1122	132	17	as	as	ADP
ajlm-1122	132	18	bronsert4	bronsert4	NOUN
ajlm-1122	132	19	who	who	PRON
ajlm-1122	132	20	identified	identify	VERB
ajlm-1122	132	21	between	between	ADP
ajlm-1122	132	22	3850	3850	NUM
ajlm-1122	132	23	and	and	CCONJ
ajlm-1122	132	24	4210	4210	NUM
ajlm-1122	132	25	peptides	peptide	NOUN
ajlm-1122	132	26	and	and	CCONJ
ajlm-1122	132	27	between	between	ADP
ajlm-1122	132	28	765	765	NUM
ajlm-1122	132	29	and	and	CCONJ
ajlm-1122	132	30	1003	1003	NUM
ajlm-1122	132	31	proteins	protein	NOUN
ajlm-1122	132	32	on	on	ADP
ajlm-1122	132	33	average	average	NOUN
ajlm-1122	132	34	for	for	ADP
ajlm-1122	132	35	five	five	NUM
ajlm-1122	132	36	biological	biological	ADJ
ajlm-1122	132	37	replicates	replicate	NOUN
ajlm-1122	132	38	.	.	PUNCT
ajlm-1122	133	1	on	on	ADP
ajlm-1122	133	2	the	the	DET
ajlm-1122	133	3	other	other	ADJ
ajlm-1122	133	4	hand	hand	NOUN
ajlm-1122	133	5	,	,	PUNCT
ajlm-1122	133	6	wiśniewski13	wiśniewski13	PROPN
ajlm-1122	133	7	identified	identify	VERB
ajlm-1122	133	8	more	more	ADJ
ajlm-1122	133	9	than	than	ADP
ajlm-1122	133	10	6000	6000	NUM
ajlm-1122	133	11	proteins	protein	NOUN
ajlm-1122	133	12	(	(	PUNCT
ajlm-1122	133	13	extracted	extract	VERB
ajlm-1122	133	14	using	use	VERB
ajlm-1122	133	15	peg	peg	NOUN
ajlm-1122	133	16	)	)	PUNCT
ajlm-1122	133	17	from	from	ADP
ajlm-1122	133	18	the	the	DET
ajlm-1122	133	19	analysis	analysis	NOUN
ajlm-1122	133	20	of	of	ADP
ajlm-1122	133	21	three	three	NUM
ajlm-1122	133	22	ffpe	ffpe	ADJ
ajlm-1122	133	23	colon	colon	NOUN
ajlm-1122	133	24	cancer	cancer	NOUN
ajlm-1122	133	25	patient	patient	NOUN
ajlm-1122	133	26	samples	sample	NOUN
ajlm-1122	133	27	and	and	CCONJ
ajlm-1122	133	28	they	they	PRON
ajlm-1122	133	29	also	also	ADV
ajlm-1122	133	30	reported	report	VERB
ajlm-1122	133	31	higher	high	ADJ
ajlm-1122	133	32	identifications	identification	NOUN
ajlm-1122	133	33	elsewhere	elsewhere	ADV
ajlm-1122	133	34	using	use	VERB
ajlm-1122	133	35	peptide	peptide	ADJ
ajlm-1122	133	36	fractionation.22,42	fractionation.22,42	NOUN
ajlm-1122	133	37	overall	overall	ADV
ajlm-1122	133	38	,	,	PUNCT
ajlm-1122	133	39	the	the	DET
ajlm-1122	133	40	standard	standard	ADJ
ajlm-1122	133	41	deviations	deviation	NOUN
ajlm-1122	133	42	reported	report	VERB
ajlm-1122	133	43	here	here	ADV
ajlm-1122	133	44	for	for	SCONJ
ajlm-1122	133	45	the	the	DET
ajlm-1122	133	46	wcpl	wcpl	NOUN
ajlm-1122	133	47	samples	sample	NOUN
ajlm-1122	133	48	fall	fall	VERB
ajlm-1122	133	49	within	within	ADP
ajlm-1122	133	50	approximately	approximately	ADV
ajlm-1122	133	51	10	10	NUM
ajlm-1122	133	52	%	%	NOUN
ajlm-1122	133	53	of	of	ADP
ajlm-1122	133	54	the	the	DET
ajlm-1122	133	55	sample	sample	NOUN
ajlm-1122	133	56	means	mean	VERB
ajlm-1122	133	57	.	.	PUNCT
ajlm-1122	134	1	nel43	nel43	NOUN
ajlm-1122	134	2	reported	report	VERB
ajlm-1122	134	3	similar	similar	ADJ
ajlm-1122	134	4	or	or	CCONJ
ajlm-1122	134	5	higher	high	ADJ
ajlm-1122	134	6	variances	variance	NOUN
ajlm-1122	134	7	between	between	ADP
ajlm-1122	134	8	triplicate	triplicate	VERB
ajlm-1122	134	9	technical	technical	ADJ
ajlm-1122	134	10	replicates	replicate	NOUN
ajlm-1122	134	11	of	of	ADP
ajlm-1122	134	12	a	a	DET
ajlm-1122	134	13	bacterial	bacterial	ADJ
ajlm-1122	134	14	cell	cell	NOUN
ajlm-1122	134	15	culture	culture	NOUN
ajlm-1122	134	16	,	,	PUNCT
ajlm-1122	134	17	as	as	SCONJ
ajlm-1122	134	18	did	do	VERB
ajlm-1122	134	19	wiśniewski13	wiśniewski13	PROPN
ajlm-1122	134	20	for	for	ADP
ajlm-1122	134	21	human	human	ADJ
ajlm-1122	134	22	cell	cell	NOUN
ajlm-1122	134	23	lines	line	NOUN
ajlm-1122	134	24	.	.	PUNCT
ajlm-1122	135	1	however	however	ADV
ajlm-1122	135	2	,	,	PUNCT
ajlm-1122	135	3	sample	sample	NOUN
ajlm-1122	135	4	variance	variance	NOUN
ajlm-1122	135	5	and	and	CCONJ
ajlm-1122	135	6	standard	standard	ADJ
ajlm-1122	135	7	deviations	deviation	NOUN
ajlm-1122	135	8	were	be	AUX
ajlm-1122	135	9	not	not	PART
ajlm-1122	135	10	explicitly	explicitly	ADV
ajlm-1122	135	11	reported	report	VERB
ajlm-1122	135	12	for	for	ADP
ajlm-1122	135	13	the	the	DET
ajlm-1122	135	14	aforementioned	aforementioned	ADJ
ajlm-1122	135	15	ffpe	ffpe	PROPN
ajlm-1122	135	16	clinical	clinical	ADJ
ajlm-1122	135	17	sample	sample	NOUN
ajlm-1122	135	18	studies	study	NOUN
ajlm-1122	135	19	.	.	PUNCT
ajlm-1122	136	1	our	our	PRON
ajlm-1122	136	2	results	result	NOUN
ajlm-1122	136	3	indicate	indicate	VERB
ajlm-1122	136	4	that	that	SCONJ
ajlm-1122	136	5	the	the	DET
ajlm-1122	136	6	majority	majority	NOUN
ajlm-1122	136	7	of	of	ADP
ajlm-1122	136	8	proteins	protein	NOUN
ajlm-1122	136	9	were	be	AUX
ajlm-1122	136	10	extracted	extract	VERB
ajlm-1122	136	11	in	in	ADP
ajlm-1122	136	12	the	the	DET
ajlm-1122	136	13	initial	initial	ADJ
ajlm-1122	136	14	wcpls	wcpls	NOUN
ajlm-1122	136	15	.	.	PUNCT
ajlm-1122	137	1	therefore	therefore	ADV
ajlm-1122	137	2	,	,	PUNCT
ajlm-1122	137	3	the	the	DET
ajlm-1122	137	4	extraction	extraction	NOUN
ajlm-1122	137	5	buffer	buffer	NOUN
ajlm-1122	137	6	containing	contain	VERB
ajlm-1122	137	7	2	2	NUM
ajlm-1122	137	8	%	%	NOUN
ajlm-1122	137	9	sds	sds	NOUN
ajlm-1122	137	10	and	and	CCONJ
ajlm-1122	137	11	the	the	DET
ajlm-1122	137	12	extraction	extraction	NOUN
ajlm-1122	137	13	protocol	protocol	NOUN
ajlm-1122	137	14	used	use	VERB
ajlm-1122	137	15	was	be	AUX
ajlm-1122	137	16	sufficiently	sufficiently	ADV
ajlm-1122	137	17	efficient	efficient	ADJ
ajlm-1122	137	18	to	to	PART
ajlm-1122	137	19	extract	extract	VERB
ajlm-1122	137	20	the	the	DET
ajlm-1122	137	21	majority	majority	NOUN
ajlm-1122	137	22	of	of	ADP
ajlm-1122	137	23	proteins	protein	NOUN
ajlm-1122	137	24	from	from	ADP
ajlm-1122	137	25	the	the	DET
ajlm-1122	137	26	patient	patient	NOUN
ajlm-1122	137	27	samples	sample	NOUN
ajlm-1122	137	28	;	;	PUNCT
ajlm-1122	137	29	the	the	DET
ajlm-1122	137	30	main	main	ADJ
ajlm-1122	137	31	differences	difference	NOUN
ajlm-1122	137	32	occurred	occur	VERB
ajlm-1122	137	33	due	due	ADP
ajlm-1122	137	34	to	to	ADP
ajlm-1122	137	35	the	the	DET
ajlm-1122	137	36	addition	addition	NOUN
ajlm-1122	137	37	of	of	ADP
ajlm-1122	137	38	peg	peg	NOUN
ajlm-1122	137	39	to	to	ADP
ajlm-1122	137	40	the	the	DET
ajlm-1122	137	41	extraction	extraction	NOUN
ajlm-1122	137	42	solution	solution	NOUN
ajlm-1122	137	43	.	.	PUNCT
ajlm-1122	138	1	tanca1	tanca1	NOUN
ajlm-1122	138	2	used	use	VERB
ajlm-1122	138	3	technical	technical	ADJ
ajlm-1122	138	4	replicates	replicate	NOUN
ajlm-1122	138	5	only	only	ADV
ajlm-1122	138	6	for	for	ADP
ajlm-1122	138	7	their	their	PRON
ajlm-1122	138	8	study	study	NOUN
ajlm-1122	138	9	and	and	CCONJ
ajlm-1122	138	10	found	find	VERB
ajlm-1122	138	11	a	a	DET
ajlm-1122	138	12	similar	similar	ADJ
ajlm-1122	138	13	variance	variance	NOUN
ajlm-1122	138	14	in	in	ADP
ajlm-1122	138	15	peptide	peptide	ADJ
ajlm-1122	138	16	identification	identification	NOUN
ajlm-1122	138	17	overlap	overlap	NOUN
ajlm-1122	138	18	,	,	PUNCT
ajlm-1122	138	19	ranging	range	VERB
ajlm-1122	138	20	from	from	ADP
ajlm-1122	138	21	as	as	ADV
ajlm-1122	138	22	low	low	ADJ
ajlm-1122	138	23	as	as	ADP
ajlm-1122	138	24	26.6	26.6	NUM
ajlm-1122	138	25	%	%	NOUN
ajlm-1122	138	26	for	for	ADP
ajlm-1122	138	27	all	all	DET
ajlm-1122	138	28	experimental	experimental	ADJ
ajlm-1122	138	29	conditions	condition	NOUN
ajlm-1122	138	30	to	to	ADP
ajlm-1122	138	31	32.6	32.6	NUM
ajlm-1122	138	32	%	%	NOUN
ajlm-1122	138	33	overlap	overlap	NOUN
ajlm-1122	138	34	between	between	ADP
ajlm-1122	138	35	one	one	NUM
ajlm-1122	138	36	set	set	NOUN
ajlm-1122	138	37	of	of	ADP
ajlm-1122	138	38	replicates	replicate	NOUN
ajlm-1122	138	39	from	from	ADP
ajlm-1122	138	40	the	the	DET
ajlm-1122	138	41	same	same	ADJ
ajlm-1122	138	42	tissue	tissue	NOUN
ajlm-1122	138	43	block	block	NOUN
ajlm-1122	138	44	(	(	PUNCT
ajlm-1122	138	45	patient	patient	NOUN
ajlm-1122	138	46	)	)	PUNCT
ajlm-1122	138	47	.	.	PUNCT
ajlm-1122	139	1	our	our	PRON
ajlm-1122	139	2	results	result	NOUN
ajlm-1122	139	3	showed	show	VERB
ajlm-1122	139	4	similar	similar	ADJ
ajlm-1122	139	5	levels	level	NOUN
ajlm-1122	139	6	of	of	ADP
ajlm-1122	139	7	overlap	overlap	NOUN
ajlm-1122	139	8	between	between	ADP
ajlm-1122	139	9	biological	biological	ADJ
ajlm-1122	139	10	replicates	replicate	NOUN
ajlm-1122	139	11	of	of	ADP
ajlm-1122	139	12	different	different	ADJ
ajlm-1122	139	13	tissue	tissue	NOUN
ajlm-1122	139	14	blocks	block	NOUN
ajlm-1122	139	15	(	(	PUNCT
ajlm-1122	139	16	patients	patient	NOUN
ajlm-1122	139	17	)	)	PUNCT
ajlm-1122	139	18	,	,	PUNCT
ajlm-1122	139	19	excluding	exclude	VERB
ajlm-1122	139	20	the	the	DET
ajlm-1122	139	21	pellet	pellet	NOUN
ajlm-1122	139	22	samples	sample	NOUN
ajlm-1122	139	23	(	(	PUNCT
ajlm-1122	139	24	which	which	PRON
ajlm-1122	139	25	were	be	AUX
ajlm-1122	139	26	not	not	PART
ajlm-1122	139	27	the	the	DET
ajlm-1122	139	28	main	main	ADJ
ajlm-1122	139	29	focus	focus	NOUN
ajlm-1122	139	30	of	of	ADP
ajlm-1122	139	31	the	the	DET
ajlm-1122	139	32	study	study	NOUN
ajlm-1122	139	33	)	)	PUNCT
ajlm-1122	139	34	.	.	PUNCT
ajlm-1122	140	1	in	in	ADP
ajlm-1122	140	2	addition	addition	NOUN
ajlm-1122	140	3	,	,	PUNCT
ajlm-1122	140	4	shared	shared	ADJ
ajlm-1122	140	5	or	or	CCONJ
ajlm-1122	140	6	common	common	ADJ
ajlm-1122	140	7	peptides	peptide	NOUN
ajlm-1122	140	8	and	and	CCONJ
ajlm-1122	140	9	proteins	protein	NOUN
ajlm-1122	140	10	between	between	ADP
ajlm-1122	140	11	the	the	DET
ajlm-1122	140	12	pellet	pellet	NOUN
ajlm-1122	140	13	samples	sample	NOUN
ajlm-1122	140	14	and	and	CCONJ
ajlm-1122	140	15	wcpls	wcpls	NOUN
ajlm-1122	140	16	are	be	AUX
ajlm-1122	140	17	due	due	ADJ
ajlm-1122	140	18	to	to	ADP
ajlm-1122	140	19	soluble	soluble	ADJ
ajlm-1122	140	20	fraction	fraction	NOUN
ajlm-1122	140	21	or	or	CCONJ
ajlm-1122	140	22	liquid	liquid	NOUN
ajlm-1122	140	23	(	(	PUNCT
ajlm-1122	140	24	containing	contain	VERB
ajlm-1122	140	25	protein	protein	NOUN
ajlm-1122	140	26	)	)	PUNCT
ajlm-1122	140	27	remaining	remain	VERB
ajlm-1122	140	28	trapped	trap	VERB
ajlm-1122	140	29	within	within	ADP
ajlm-1122	140	30	the	the	DET
ajlm-1122	140	31	sample	sample	NOUN
ajlm-1122	140	32	pellets	pellet	NOUN
ajlm-1122	140	33	,	,	PUNCT
ajlm-1122	140	34	after	after	ADP
ajlm-1122	140	35	protein	protein	NOUN
ajlm-1122	140	36	extraction	extraction	NOUN
ajlm-1122	140	37	and	and	CCONJ
ajlm-1122	140	38	homogenate	homogenate	NOUN
ajlm-1122	140	39	clarification	clarification	NOUN
ajlm-1122	140	40	(	(	PUNCT
ajlm-1122	140	41	by	by	ADP
ajlm-1122	140	42	centrifugation).44	centrifugation).44	NOUN
ajlm-1122	140	43	furthermore	furthermore	ADV
ajlm-1122	140	44	,	,	PUNCT
ajlm-1122	140	45	the	the	DET
ajlm-1122	140	46	unique	unique	ADJ
ajlm-1122	140	47	peptides	peptide	NOUN
ajlm-1122	140	48	of	of	ADP
ajlm-1122	140	49	the	the	DET
ajlm-1122	140	50	pellet	pellet	NOUN
ajlm-1122	140	51	samples	sample	NOUN
ajlm-1122	140	52	may	may	AUX
ajlm-1122	140	53	also	also	ADV
ajlm-1122	140	54	,	,	PUNCT
ajlm-1122	140	55	in	in	ADP
ajlm-1122	140	56	part	part	NOUN
ajlm-1122	140	57	,	,	PUNCT
ajlm-1122	140	58	be	be	AUX
ajlm-1122	140	59	attributed	attribute	VERB
ajlm-1122	140	60	by	by	ADP
ajlm-1122	140	61	the	the	DET
ajlm-1122	140	62	higher	high	ADJ
ajlm-1122	140	63	sds	sds	PROPN
ajlm-1122	140	64	concentration	concentration	NOUN
ajlm-1122	140	65	(	(	PUNCT
ajlm-1122	140	66	4	4	NUM
ajlm-1122	140	67	%	%	NOUN
ajlm-1122	140	68	sds	sds	NOUN
ajlm-1122	140	69	)	)	PUNCT
ajlm-1122	140	70	used	use	VERB
ajlm-1122	140	71	for	for	ADP
ajlm-1122	140	72	extraction	extraction	NOUN
ajlm-1122	140	73	,	,	PUNCT
ajlm-1122	140	74	since	since	SCONJ
ajlm-1122	140	75	other	other	ADJ
ajlm-1122	140	76	studies	study	NOUN
ajlm-1122	140	77	have	have	AUX
ajlm-1122	140	78	found	find	VERB
ajlm-1122	140	79	greater	great	ADJ
ajlm-1122	140	80	protein	protein	NOUN
ajlm-1122	140	81	extraction	extraction	NOUN
ajlm-1122	140	82	efficiency	efficiency	NOUN
ajlm-1122	140	83	by	by	ADP
ajlm-1122	140	84	using	use	VERB
ajlm-1122	140	85	higher	high	ADJ
ajlm-1122	140	86	sds	sds	PROPN
ajlm-1122	140	87	concentrations.4,41,42,45	concentrations.4,41,42,45	PROPN
ajlm-1122	140	88	trypsin	trypsin	NOUN
ajlm-1122	140	89	digestion	digestion	NOUN
ajlm-1122	140	90	efficiency	efficiency	NOUN
ajlm-1122	140	91	influences	influence	VERB
ajlm-1122	140	92	the	the	DET
ajlm-1122	140	93	molecular	molecular	ADJ
ajlm-1122	140	94	weight	weight	NOUN
ajlm-1122	140	95	of	of	ADP
ajlm-1122	140	96	peptides.46	peptides.46	PROPN
ajlm-1122	140	97	however	however	ADV
ajlm-1122	140	98	,	,	PUNCT
ajlm-1122	140	99	all	all	DET
ajlm-1122	140	100	samples	sample	NOUN
ajlm-1122	140	101	in	in	ADP
ajlm-1122	140	102	this	this	DET
ajlm-1122	140	103	current	current	ADJ
ajlm-1122	140	104	study	study	NOUN
ajlm-1122	140	105	were	be	AUX
ajlm-1122	140	106	subjected	subject	VERB
ajlm-1122	140	107	to	to	ADP
ajlm-1122	140	108	the	the	DET
ajlm-1122	140	109	same	same	ADJ
ajlm-1122	140	110	digestion	digestion	NOUN
ajlm-1122	140	111	protocol	protocol	NOUN
ajlm-1122	140	112	.	.	PUNCT
ajlm-1122	141	1	therefore	therefore	ADV
ajlm-1122	141	2	,	,	PUNCT
ajlm-1122	141	3	our	our	PRON
ajlm-1122	141	4	results	result	NOUN
ajlm-1122	141	5	show	show	VERB
ajlm-1122	141	6	that	that	SCONJ
ajlm-1122	141	7	the	the	DET
ajlm-1122	141	8	addition	addition	NOUN
ajlm-1122	141	9	or	or	CCONJ
ajlm-1122	141	10	omission	omission	NOUN
ajlm-1122	141	11	of	of	ADP
ajlm-1122	141	12	peg	peg	NOUN
ajlm-1122	141	13	to	to	ADP
ajlm-1122	141	14	the	the	DET
ajlm-1122	141	15	protein	protein	NOUN
ajlm-1122	141	16	extraction	extraction	NOUN
ajlm-1122	141	17	buffer	buffer	NOUN
ajlm-1122	141	18	did	do	AUX
ajlm-1122	141	19	not	not	PART
ajlm-1122	141	20	affect	affect	VERB
ajlm-1122	141	21	end	end	NOUN
ajlm-1122	141	22	-	-	PUNCT
ajlm-1122	141	23	result	result	NOUN
ajlm-1122	141	24	molecular	molecular	ADJ
ajlm-1122	141	25	weight	weight	NOUN
ajlm-1122	141	26	distributions	distribution	NOUN
ajlm-1122	141	27	,	,	PUNCT
ajlm-1122	141	28	nor	nor	CCONJ
ajlm-1122	141	29	were	be	AUX
ajlm-1122	141	30	there	there	PRON
ajlm-1122	141	31	any	any	DET
ajlm-1122	141	32	significant	significant	ADJ
ajlm-1122	141	33	differences	difference	NOUN
ajlm-1122	141	34	in	in	ADP
ajlm-1122	141	35	molecular	molecular	ADJ
ajlm-1122	141	36	weight	weight	NOUN
ajlm-1122	141	37	distributions	distribution	NOUN
ajlm-1122	141	38	of	of	ADP
ajlm-1122	141	39	residual	residual	ADJ
ajlm-1122	141	40	proteins	protein	NOUN
ajlm-1122	141	41	from	from	ADP
ajlm-1122	141	42	the	the	DET
ajlm-1122	141	43	pellets	pellet	NOUN
ajlm-1122	141	44	.	.	PUNCT
ajlm-1122	142	1	overall	overall	ADV
ajlm-1122	142	2	,	,	PUNCT
ajlm-1122	142	3	neither	neither	CCONJ
ajlm-1122	142	4	the	the	DET
ajlm-1122	142	5	addition	addition	NOUN
ajlm-1122	142	6	nor	nor	CCONJ
ajlm-1122	142	7	omission	omission	NOUN
ajlm-1122	142	8	of	of	ADP
ajlm-1122	142	9	peg	peg	NOUN
ajlm-1122	142	10	to	to	ADP
ajlm-1122	142	11	the	the	DET
ajlm-1122	142	12	protein	protein	NOUN
ajlm-1122	142	13	extraction	extraction	NOUN
ajlm-1122	142	14	solution	solution	NOUN
ajlm-1122	142	15	had	have	VERB
ajlm-1122	142	16	any	any	DET
ajlm-1122	142	17	selection	selection	NOUN
ajlm-1122	142	18	bias	bias	NOUN
ajlm-1122	142	19	with	with	ADP
ajlm-1122	142	20	regard	regard	NOUN
ajlm-1122	142	21	to	to	ADP
ajlm-1122	142	22	extracted	extract	VERB
ajlm-1122	142	23	proteins	protein	NOUN
ajlm-1122	142	24	’	'	PUNCT
ajlm-1122	142	25	physicochemical	physicochemical	ADJ
ajlm-1122	142	26	properties	property	NOUN
ajlm-1122	142	27	.	.	PUNCT
ajlm-1122	143	1	similar	similar	ADJ
ajlm-1122	143	2	results	result	NOUN
ajlm-1122	143	3	were	be	AUX
ajlm-1122	143	4	observed	observe	VERB
ajlm-1122	143	5	by	by	ADP
ajlm-1122	143	6	hughes19	hughes19	NOUN
ajlm-1122	143	7	and	and	CCONJ
ajlm-1122	143	8	moggridge.47	moggridge.47	PROPN
ajlm-1122	143	9	after	after	ADP
ajlm-1122	143	10	processing	process	VERB
ajlm-1122	143	11	protein	protein	NOUN
ajlm-1122	143	12	extracts	extract	NOUN
ajlm-1122	143	13	using	use	VERB
ajlm-1122	143	14	the	the	DET
ajlm-1122	143	15	hilic	hilic	NOUN
ajlm-1122	143	16	/	/	SYM
ajlm-1122	143	17	sp3	sp3	NOUN
ajlm-1122	143	18	method	method	NOUN
ajlm-1122	143	19	,	,	PUNCT
ajlm-1122	143	20	they	they	PRON
ajlm-1122	143	21	found	find	VERB
ajlm-1122	143	22	no	no	DET
ajlm-1122	143	23	obvious	obvious	ADJ
ajlm-1122	143	24	bias	bias	NOUN
ajlm-1122	143	25	with	with	ADP
ajlm-1122	143	26	regard	regard	NOUN
ajlm-1122	143	27	to	to	ADP
ajlm-1122	143	28	the	the	DET
ajlm-1122	143	29	molecular	molecular	ADJ
ajlm-1122	143	30	mass	mass	NOUN
ajlm-1122	143	31	,	,	PUNCT
ajlm-1122	143	32	isoelectric	isoelectric	ADJ
ajlm-1122	143	33	point	point	NOUN
ajlm-1122	143	34	or	or	CCONJ
ajlm-1122	143	35	average	average	ADJ
ajlm-1122	143	36	relative	relative	ADJ
ajlm-1122	143	37	hydropathicity	hydropathicity	NOUN
ajlm-1122	143	38	of	of	ADP
ajlm-1122	143	39	resultant	resultant	NOUN
ajlm-1122	143	40	isolated	isolate	VERB
ajlm-1122	143	41	peptides	peptide	NOUN
ajlm-1122	143	42	.	.	PUNCT
ajlm-1122	144	1	in	in	ADP
ajlm-1122	144	2	addition	addition	NOUN
ajlm-1122	144	3	,	,	PUNCT
ajlm-1122	144	4	go	go	VERB
ajlm-1122	144	5	analysis	analysis	NOUN
ajlm-1122	144	6	did	do	AUX
ajlm-1122	144	7	not	not	PART
ajlm-1122	144	8	indicate	indicate	VERB
ajlm-1122	144	9	any	any	DET
ajlm-1122	144	10	bias	bias	NOUN
ajlm-1122	144	11	with	with	ADP
ajlm-1122	144	12	regard	regard	NOUN
ajlm-1122	144	13	to	to	ADP
ajlm-1122	144	14	protein	protein	NOUN
ajlm-1122	144	15	enrichment	enrichment	NOUN
ajlm-1122	144	16	either	either	ADV
ajlm-1122	144	17	.	.	PUNCT
ajlm-1122	145	1	the	the	DET
ajlm-1122	145	2	hilic	hilic	NOUN
ajlm-1122	145	3	/	/	SYM
ajlm-1122	145	4	sp3	sp3	NOUN
ajlm-1122	145	5	protocol	protocol	NOUN
ajlm-1122	145	6	also	also	ADV
ajlm-1122	145	7	generated	generate	VERB
ajlm-1122	145	8	low	low	ADJ
ajlm-1122	145	9	percentages	percentage	NOUN
ajlm-1122	145	10	of	of	ADP
ajlm-1122	145	11	missed	miss	VERB
ajlm-1122	145	12	cleavages	cleavage	NOUN
ajlm-1122	145	13	across	across	ADP
ajlm-1122	145	14	all	all	DET
ajlm-1122	145	15	samples	sample	NOUN
ajlm-1122	145	16	,	,	PUNCT
ajlm-1122	145	17	indicating	indicate	VERB
ajlm-1122	145	18	that	that	SCONJ
ajlm-1122	145	19	the	the	DET
ajlm-1122	145	20	workflow	workflow	NOUN
ajlm-1122	145	21	was	be	AUX
ajlm-1122	145	22	sufficiently	sufficiently	ADV
ajlm-1122	145	23	reproducible	reproducible	ADJ
ajlm-1122	145	24	and	and	CCONJ
ajlm-1122	145	25	efficient	efficient	ADJ
ajlm-1122	145	26	at	at	ADP
ajlm-1122	145	27	removing	remove	VERB
ajlm-1122	145	28	any	any	DET
ajlm-1122	145	29	interfering	interfere	VERB
ajlm-1122	145	30	chemicals	chemical	NOUN
ajlm-1122	145	31	(	(	PUNCT
ajlm-1122	145	32	such	such	ADJ
ajlm-1122	145	33	as	as	ADP
ajlm-1122	145	34	peg	peg	NOUN
ajlm-1122	145	35	and	and	CCONJ
ajlm-1122	145	36	sds	sds	PROPN
ajlm-1122	145	37	)	)	PUNCT
ajlm-1122	145	38	.	.	PUNCT
ajlm-1122	146	1	batth,48	batth,48	VERB
ajlm-1122	146	2	hughes49	hughes49	NOUN
ajlm-1122	146	3	and	and	CCONJ
ajlm-1122	146	4	moggridge47	moggridge47	PROPN
ajlm-1122	146	5	have	have	AUX
ajlm-1122	146	6	also	also	ADV
ajlm-1122	146	7	demonstrated	demonstrate	VERB
ajlm-1122	146	8	the	the	DET
ajlm-1122	146	9	sensitivity	sensitivity	NOUN
ajlm-1122	146	10	,	,	PUNCT
ajlm-1122	146	11	reproducibility	reproducibility	NOUN
ajlm-1122	146	12	and	and	CCONJ
ajlm-1122	146	13	efficiency	efficiency	NOUN
ajlm-1122	146	14	of	of	ADP
ajlm-1122	146	15	the	the	DET
ajlm-1122	146	16	hilic	hilic	NOUN
ajlm-1122	146	17	/	/	SYM
ajlm-1122	146	18	sp3	sp3	NOUN
ajlm-1122	146	19	sample	sample	NOUN
ajlm-1122	146	20	preparation	preparation	NOUN
ajlm-1122	146	21	method	method	NOUN
ajlm-1122	146	22	in	in	ADP
ajlm-1122	146	23	removing	remove	VERB
ajlm-1122	146	24	sample	sample	NOUN
ajlm-1122	146	25	contaminants	contaminant	NOUN
ajlm-1122	146	26	for	for	ADP
ajlm-1122	146	27	optimal	optimal	ADJ
ajlm-1122	146	28	recovery	recovery	NOUN
ajlm-1122	146	29	of	of	ADP
ajlm-1122	146	30	peptides	peptide	NOUN
ajlm-1122	146	31	for	for	ADP
ajlm-1122	146	32	lc	lc	NOUN
ajlm-1122	146	33	-	-	PUNCT
ajlm-1122	146	34	ms	ms	PROPN
ajlm-1122	146	35	/	/	SYM
ajlm-1122	146	36	ms	ms	NOUN
ajlm-1122	146	37	analysis	analysis	NOUN
ajlm-1122	146	38	.	.	PUNCT
ajlm-1122	147	1	limitations	limitation	NOUN
ajlm-1122	147	2	the	the	DET
ajlm-1122	147	3	current	current	ADJ
ajlm-1122	147	4	study	study	NOUN
ajlm-1122	147	5	had	have	VERB
ajlm-1122	147	6	access	access	NOUN
ajlm-1122	147	7	to	to	ADP
ajlm-1122	147	8	tissue	tissue	NOUN
ajlm-1122	147	9	samples	sample	NOUN
ajlm-1122	147	10	that	that	PRON
ajlm-1122	147	11	were	be	AUX
ajlm-1122	147	12	not	not	PART
ajlm-1122	147	13	limited	limit	VERB
ajlm-1122	147	14	with	with	ADP
ajlm-1122	147	15	regard	regard	NOUN
ajlm-1122	147	16	to	to	ADP
ajlm-1122	147	17	sample	sample	NOUN
ajlm-1122	147	18	volumes	volume	NOUN
ajlm-1122	147	19	and	and	CCONJ
ajlm-1122	147	20	concentrations	concentration	NOUN
ajlm-1122	147	21	required	require	VERB
ajlm-1122	147	22	for	for	ADP
ajlm-1122	147	23	ms	ms	NOUN
ajlm-1122	147	24	analysis	analysis	NOUN
ajlm-1122	147	25	compared	compare	VERB
ajlm-1122	147	26	to	to	ADP
ajlm-1122	147	27	,	,	PUNCT
ajlm-1122	147	28	for	for	ADP
ajlm-1122	147	29	example	example	NOUN
ajlm-1122	147	30	,	,	PUNCT
ajlm-1122	147	31	limited	limited	ADJ
ajlm-1122	147	32	samples	sample	NOUN
ajlm-1122	147	33	such	such	ADJ
ajlm-1122	147	34	as	as	ADP
ajlm-1122	147	35	fine	fine	ADJ
ajlm-1122	147	36	needle	needle	NOUN
ajlm-1122	147	37	biopsies	biopsy	NOUN
ajlm-1122	147	38	.	.	PUNCT
ajlm-1122	148	1	therefore	therefore	ADV
ajlm-1122	148	2	,	,	PUNCT
ajlm-1122	148	3	it	it	PRON
ajlm-1122	148	4	was	be	AUX
ajlm-1122	148	5	neither	neither	CCONJ
ajlm-1122	148	6	feasible	feasible	ADJ
ajlm-1122	148	7	nor	nor	CCONJ
ajlm-1122	148	8	cost	cost	NOUN
ajlm-1122	148	9	-	-	PUNCT
ajlm-1122	148	10	beneficial	beneficial	ADJ
ajlm-1122	148	11	for	for	SCONJ
ajlm-1122	148	12	us	we	PRON
ajlm-1122	148	13	to	to	PART
ajlm-1122	148	14	determine	determine	VERB
ajlm-1122	148	15	the	the	DET
ajlm-1122	148	16	effects	effect	NOUN
ajlm-1122	148	17	of	of	ADP
ajlm-1122	148	18	peg	peg	NOUN
ajlm-1122	148	19	at	at	ADP
ajlm-1122	148	20	<	<	X
ajlm-1122	148	21	10	10	NUM
ajlm-1122	148	22	µg	µg	ADV
ajlm-1122	148	23	protein	protein	NOUN
ajlm-1122	148	24	,	,	PUNCT
ajlm-1122	148	25	since	since	SCONJ
ajlm-1122	148	26	this	this	PRON
ajlm-1122	148	27	was	be	AUX
ajlm-1122	148	28	not	not	PART
ajlm-1122	148	29	compatible	compatible	ADJ
ajlm-1122	148	30	with	with	ADP
ajlm-1122	148	31	the	the	DET
ajlm-1122	148	32	material	material	NOUN
ajlm-1122	148	33	we	we	PRON
ajlm-1122	148	34	had	have	VERB
ajlm-1122	148	35	available	available	ADJ
ajlm-1122	148	36	,	,	PUNCT
ajlm-1122	148	37	and	and	CCONJ
ajlm-1122	148	38	did	do	AUX
ajlm-1122	148	39	not	not	PART
ajlm-1122	148	40	fall	fall	VERB
ajlm-1122	148	41	within	within	ADP
ajlm-1122	148	42	the	the	DET
ajlm-1122	148	43	scope	scope	NOUN
ajlm-1122	148	44	of	of	ADP
ajlm-1122	148	45	the	the	DET
ajlm-1122	148	46	present	present	ADJ
ajlm-1122	148	47	study	study	NOUN
ajlm-1122	148	48	or	or	CCONJ
ajlm-1122	148	49	studies	study	NOUN
ajlm-1122	148	50	stemming	stem	VERB
ajlm-1122	148	51	from	from	ADP
ajlm-1122	148	52	it.12	it.12	PROPN
ajlm-1122	148	53	conclusion	conclusion	NOUN
ajlm-1122	148	54	using	use	VERB
ajlm-1122	148	55	ffpe	ffpe	NOUN
ajlm-1122	148	56	human	human	ADJ
ajlm-1122	148	57	colorectal	colorectal	ADJ
ajlm-1122	148	58	cancer	cancer	NOUN
ajlm-1122	148	59	resection	resection	NOUN
ajlm-1122	148	60	tissue	tissue	NOUN
ajlm-1122	148	61	,	,	PUNCT
ajlm-1122	148	62	we	we	PRON
ajlm-1122	148	63	demonstrated	demonstrate	VERB
ajlm-1122	148	64	that	that	SCONJ
ajlm-1122	148	65	the	the	DET
ajlm-1122	148	66	addition	addition	NOUN
ajlm-1122	148	67	of	of	ADP
ajlm-1122	148	68	0.5	0.5	NUM
ajlm-1122	148	69	%	%	NOUN
ajlm-1122	148	70	peg	peg	NOUN
ajlm-1122	148	71	to	to	ADP
ajlm-1122	148	72	protein	protein	NOUN
ajlm-1122	148	73	extraction	extraction	NOUN
ajlm-1122	148	74	buffer	buffer	NOUN
ajlm-1122	148	75	resulted	result	VERB
ajlm-1122	148	76	in	in	ADP
ajlm-1122	148	77	overall	overall	ADV
ajlm-1122	148	78	lower	low	ADJ
ajlm-1122	148	79	peptide	peptide	NOUN
ajlm-1122	148	80	and	and	CCONJ
ajlm-1122	148	81	protein	protein	NOUN
ajlm-1122	148	82	identifications	identification	NOUN
ajlm-1122	148	83	,	,	PUNCT
ajlm-1122	148	84	compared	compare	VERB
ajlm-1122	148	85	to	to	PART
ajlm-1122	148	86	buffer	buffer	VERB
ajlm-1122	148	87	without	without	ADP
ajlm-1122	148	88	the	the	DET
ajlm-1122	148	89	addition	addition	NOUN
ajlm-1122	148	90	of	of	ADP
ajlm-1122	148	91	peg	peg	NOUN
ajlm-1122	148	92	.	.	PUNCT
ajlm-1122	149	1	in	in	ADP
ajlm-1122	149	2	addition	addition	NOUN
ajlm-1122	149	3	,	,	PUNCT
ajlm-1122	149	4	protein	protein	NOUN
ajlm-1122	149	5	samples	sample	NOUN
ajlm-1122	149	6	extracted	extract	VERB
ajlm-1122	149	7	without	without	ADP
ajlm-1122	149	8	peg	peg	NOUN
ajlm-1122	149	9	showed	show	VERB
ajlm-1122	149	10	higher	high	ADJ
ajlm-1122	149	11	reproducibility	reproducibility	NOUN
ajlm-1122	149	12	,	,	PUNCT
ajlm-1122	149	13	and	and	CCONJ
ajlm-1122	149	14	the	the	DET
ajlm-1122	149	15	addition	addition	NOUN
ajlm-1122	149	16	of	of	ADP
ajlm-1122	149	17	peg	peg	NOUN
ajlm-1122	149	18	to	to	ADP
ajlm-1122	149	19	the	the	DET
ajlm-1122	149	20	protein	protein	NOUN
ajlm-1122	149	21	extraction	extraction	NOUN
ajlm-1122	149	22	buffer	buffer	NOUN
ajlm-1122	149	23	generated	generate	VERB
ajlm-1122	149	24	lower	low	ADJ
ajlm-1122	149	25	percentages	percentage	NOUN
ajlm-1122	149	26	of	of	ADP
ajlm-1122	149	27	unique	unique	ADJ
ajlm-1122	149	28	peptides	peptide	NOUN
ajlm-1122	149	29	remaining	remain	VERB
ajlm-1122	149	30	in	in	ADP
ajlm-1122	149	31	the	the	DET
ajlm-1122	149	32	sample	sample	NOUN
ajlm-1122	149	33	pellets	pellet	NOUN
ajlm-1122	149	34	.	.	PUNCT
ajlm-1122	150	1	by	by	ADP
ajlm-1122	150	2	expanding	expand	VERB
ajlm-1122	150	3	on	on	ADP
ajlm-1122	150	4	previous	previous	ADJ
ajlm-1122	150	5	studies	study	NOUN
ajlm-1122	150	6	that	that	PRON
ajlm-1122	150	7	only	only	ADV
ajlm-1122	150	8	analysed	analyse	VERB
ajlm-1122	150	9	ffpe	ffpe	NOUN
ajlm-1122	150	10	animal	animal	NOUN
ajlm-1122	150	11	tissues	tissue	NOUN
ajlm-1122	150	12	and	and	CCONJ
ajlm-1122	150	13	human	human	ADJ
ajlm-1122	150	14	cells	cell	NOUN
ajlm-1122	150	15	,	,	PUNCT
ajlm-1122	150	16	we	we	PRON
ajlm-1122	150	17	have	have	AUX
ajlm-1122	150	18	demonstrated	demonstrate	VERB
ajlm-1122	150	19	that	that	SCONJ
ajlm-1122	150	20	high	high	ADJ
ajlm-1122	150	21	protein	protein	NOUN
ajlm-1122	150	22	concentrations	concentration	NOUN
ajlm-1122	150	23	(	(	PUNCT
ajlm-1122	150	24	>	>	X
ajlm-1122	150	25	10	10	NUM
ajlm-1122	150	26	µg	µg	NOUN
ajlm-1122	150	27	)	)	PUNCT
ajlm-1122	150	28	from	from	ADP
ajlm-1122	150	29	ffpe	ffpe	ADJ
ajlm-1122	150	30	human	human	ADJ
ajlm-1122	150	31	colon	colon	NOUN
ajlm-1122	150	32	tissue	tissue	NOUN
ajlm-1122	150	33	also	also	ADV
ajlm-1122	150	34	compromises	compromise	VERB
ajlm-1122	150	35	the	the	DET
ajlm-1122	150	36	function	function	NOUN
ajlm-1122	150	37	of	of	ADP
ajlm-1122	150	38	peg	peg	NOUN
ajlm-1122	150	39	.	.	PUNCT
ajlm-1122	151	1	the	the	DET
ajlm-1122	151	2	data	datum	NOUN
ajlm-1122	151	3	from	from	ADP
ajlm-1122	151	4	this	this	DET
ajlm-1122	151	5	study	study	NOUN
ajlm-1122	151	6	,	,	PUNCT
ajlm-1122	151	7	together	together	ADV
ajlm-1122	151	8	with	with	ADP
ajlm-1122	151	9	our	our	PRON
ajlm-1122	151	10	recently	recently	ADV
ajlm-1122	151	11	published	publish	VERB
ajlm-1122	151	12	selection	selection	NOUN
ajlm-1122	151	13	of	of	ADP
ajlm-1122	151	14	protein	protein	NOUN
ajlm-1122	151	15	purification	purification	NOUN
ajlm-1122	151	16	protocols	protocol	NOUN
ajlm-1122	151	17	for	for	ADP
ajlm-1122	151	18	different	different	ADJ
ajlm-1122	151	19	ffpe	ffpe	NOUN
ajlm-1122	151	20	block	block	NOUN
ajlm-1122	151	21	ages,12	ages,12	ADJ
ajlm-1122	151	22	should	should	AUX
ajlm-1122	151	23	provide	provide	VERB
ajlm-1122	151	24	pathologists	pathologist	NOUN
ajlm-1122	151	25	with	with	ADP
ajlm-1122	151	26	an	an	DET
ajlm-1122	151	27	optimised	optimise	VERB
ajlm-1122	151	28	methodological	methodological	ADJ
ajlm-1122	151	29	approach	approach	NOUN
ajlm-1122	151	30	to	to	PART
ajlm-1122	151	31	exploit	exploit	VERB
ajlm-1122	151	32	the	the	DET
ajlm-1122	151	33	use	use	NOUN
ajlm-1122	151	34	of	of	ADP
ajlm-1122	151	35	archival	archival	NOUN
ajlm-1122	151	36	ffpe	ffpe	NOUN
ajlm-1122	151	37	tissue	tissue	NOUN
ajlm-1122	151	38	blocks	block	NOUN
ajlm-1122	151	39	.	.	PUNCT
ajlm-1122	152	1	acknowledgements	acknowledgement	NOUN
ajlm-1122	152	2	we	we	PRON
ajlm-1122	152	3	thank	thank	VERB
ajlm-1122	152	4	prof	prof	PROPN
ajlm-1122	152	5	.	.	PUNCT
ajlm-1122	153	1	gerhard	gerhard	PROPN
ajlm-1122	153	2	walzl	walzl	PROPN
ajlm-1122	153	3	for	for	ADP
ajlm-1122	153	4	making	make	VERB
ajlm-1122	153	5	available	available	ADJ
ajlm-1122	153	6	laboratory	laboratory	NOUN
ajlm-1122	153	7	bench	bench	NOUN
ajlm-1122	153	8	space	space	NOUN
ajlm-1122	153	9	at	at	ADP
ajlm-1122	153	10	the	the	DET
ajlm-1122	153	11	stellenbosch	stellenbosch	PROPN
ajlm-1122	153	12	university	university	PROPN
ajlm-1122	153	13	immunology	immunology	NOUN
ajlm-1122	153	14	group	group	NOUN
ajlm-1122	153	15	,	,	PUNCT
ajlm-1122	153	16	and	and	CCONJ
ajlm-1122	153	17	mrs	mrs	PROPN
ajlm-1122	153	18	andrea	andrea	PROPN
ajlm-1122	153	19	gutschmidt	gutschmidt	PROPN
ajlm-1122	153	20	at	at	ADP
ajlm-1122	153	21	the	the	DET
ajlm-1122	153	22	stellenbosch	stellenbosch	PROPN
ajlm-1122	153	23	university	university	PROPN
ajlm-1122	153	24	immunology	immunology	NOUN
ajlm-1122	153	25	group	group	NOUN
ajlm-1122	153	26	for	for	ADP
ajlm-1122	153	27	her	her	PRON
ajlm-1122	153	28	technical	technical	ADJ
ajlm-1122	153	29	assistance	assistance	NOUN
ajlm-1122	153	30	and	and	CCONJ
ajlm-1122	153	31	support	support	NOUN
ajlm-1122	153	32	during	during	ADP
ajlm-1122	153	33	the	the	DET
ajlm-1122	153	34	use	use	NOUN
ajlm-1122	153	35	of	of	ADP
ajlm-1122	153	36	their	their	PRON
ajlm-1122	153	37	laboratory	laboratory	NOUN
ajlm-1122	153	38	space	space	NOUN
ajlm-1122	153	39	.	.	PUNCT
ajlm-1122	154	1	we	we	PRON
ajlm-1122	154	2	also	also	ADV
ajlm-1122	154	3	thank	thank	VERB
ajlm-1122	154	4	mr	mr	PROPN
ajlm-1122	154	5	charles	charles	PROPN
ajlm-1122	154	6	gelderbloem	gelderbloem	PROPN
ajlm-1122	154	7	and	and	CCONJ
ajlm-1122	154	8	mr	mr	PROPN
ajlm-1122	154	9	yunus	yunus	PROPN
ajlm-1122	154	10	kippie	kippie	PROPN
ajlm-1122	154	11	at	at	ADP
ajlm-1122	154	12	the	the	DET
ajlm-1122	154	13	university	university	NOUN
ajlm-1122	154	14	of	of	ADP
ajlm-1122	154	15	the	the	DET
ajlm-1122	154	16	western	western	ADJ
ajlm-1122	154	17	cape	cape	NOUN
ajlm-1122	154	18	’s	’s	PART
ajlm-1122	154	19	biotechnology	biotechnology	NOUN
ajlm-1122	154	20	and	and	CCONJ
ajlm-1122	154	21	pharmacology	pharmacology	NOUN
ajlm-1122	154	22	departments	department	NOUN
ajlm-1122	154	23	for	for	ADP
ajlm-1122	154	24	their	their	PRON
ajlm-1122	154	25	technical	technical	ADJ
ajlm-1122	154	26	assistance	assistance	NOUN
ajlm-1122	154	27	and	and	CCONJ
ajlm-1122	154	28	support	support	NOUN
ajlm-1122	154	29	during	during	ADP
ajlm-1122	154	30	the	the	DET
ajlm-1122	154	31	project	project	NOUN
ajlm-1122	154	32	.	.	PUNCT
ajlm-1122	155	1	competing	compete	VERB
ajlm-1122	155	2	interests	interest	NOUN
ajlm-1122	155	3	the	the	DET
ajlm-1122	155	4	authors	author	NOUN
ajlm-1122	155	5	declare	declare	VERB
ajlm-1122	155	6	that	that	SCONJ
ajlm-1122	155	7	they	they	PRON
ajlm-1122	155	8	have	have	VERB
ajlm-1122	155	9	no	no	DET
ajlm-1122	155	10	financial	financial	ADJ
ajlm-1122	155	11	or	or	CCONJ
ajlm-1122	155	12	personal	personal	ADJ
ajlm-1122	155	13	relationships	relationship	NOUN
ajlm-1122	155	14	that	that	PRON
ajlm-1122	155	15	may	may	AUX
ajlm-1122	155	16	have	have	AUX
ajlm-1122	155	17	inappropriately	inappropriately	ADV
ajlm-1122	155	18	influenced	influence	VERB
ajlm-1122	155	19	them	they	PRON
ajlm-1122	155	20	in	in	ADP
ajlm-1122	155	21	writing	write	VERB
ajlm-1122	155	22	this	this	DET
ajlm-1122	155	23	article	article	NOUN
ajlm-1122	155	24	.	.	PUNCT
ajlm-1122	156	1	authors	author	NOUN
ajlm-1122	156	2	’	'	PUNCT
ajlm-1122	156	3	contributions	contribution	NOUN
ajlm-1122	156	4	s.r	s.r	PROPN
ajlm-1122	156	5	.	.	PROPN
ajlm-1122	156	6	,	,	PUNCT
ajlm-1122	156	7	j.r	j.r	PROPN
ajlm-1122	156	8	.	.	PROPN
ajlm-1122	156	9	and	and	CCONJ
ajlm-1122	156	10	a.c	a.c	PROPN
ajlm-1122	156	11	.	.	PROPN
ajlm-1122	156	12	designed	design	VERB
ajlm-1122	156	13	the	the	DET
ajlm-1122	156	14	project	project	NOUN
ajlm-1122	156	15	.	.	PUNCT
ajlm-1122	157	1	s.r	s.r	PROPN
ajlm-1122	157	2	.	.	PROPN
ajlm-1122	157	3	collected	collect	VERB
ajlm-1122	157	4	all	all	DET
ajlm-1122	157	5	samples	sample	NOUN
ajlm-1122	157	6	,	,	PUNCT
ajlm-1122	157	7	did	do	VERB
ajlm-1122	157	8	the	the	DET
ajlm-1122	157	9	protein	protein	NOUN
ajlm-1122	157	10	extraction	extraction	NOUN
ajlm-1122	157	11	work	work	NOUN
ajlm-1122	157	12	and	and	CCONJ
ajlm-1122	157	13	drafted	draft	VERB
ajlm-1122	157	14	the	the	DET
ajlm-1122	157	15	first	first	ADJ
ajlm-1122	157	16	version	version	NOUN
ajlm-1122	157	17	of	of	ADP
ajlm-1122	157	18	the	the	DET
ajlm-1122	157	19	manuscript	manuscript	NOUN
ajlm-1122	157	20	.	.	PUNCT
ajlm-1122	158	1	a.c	a.c	PROPN
ajlm-1122	158	2	.	.	PROPN
ajlm-1122	158	3	provided	provide	VERB
ajlm-1122	158	4	the	the	DET
ajlm-1122	158	5	funding	funding	NOUN
ajlm-1122	158	6	for	for	ADP
ajlm-1122	158	7	the	the	DET
ajlm-1122	158	8	project	project	NOUN
ajlm-1122	158	9	.	.	PUNCT
ajlm-1122	159	1	l.b	l.b	PROPN
ajlm-1122	159	2	.	.	PROPN
ajlm-1122	159	3	performed	perform	VERB
ajlm-1122	159	4	the	the	DET
ajlm-1122	159	5	mass	mass	ADJ
ajlm-1122	159	6	spectrometry	spectrometry	NOUN
ajlm-1122	159	7	experiment	experiment	NOUN
ajlm-1122	159	8	.	.	PUNCT
ajlm-1122	160	1	h.b	h.b	PROPN
ajlm-1122	160	2	.	.	PROPN
ajlm-1122	160	3	assisted	assist	VERB
ajlm-1122	160	4	with	with	ADP
ajlm-1122	160	5	the	the	DET
ajlm-1122	160	6	data	datum	NOUN
ajlm-1122	160	7	analysis	analysis	NOUN
ajlm-1122	160	8	.	.	PUNCT
ajlm-1122	161	1	the	the	DET
ajlm-1122	161	2	manuscript	manuscript	NOUN
ajlm-1122	161	3	was	be	AUX
ajlm-1122	161	4	written	write	VERB
ajlm-1122	161	5	through	through	ADP
ajlm-1122	161	6	contributions	contribution	NOUN
ajlm-1122	161	7	from	from	ADP
ajlm-1122	161	8	all	all	DET
ajlm-1122	161	9	authors	author	NOUN
ajlm-1122	161	10	.	.	PUNCT
ajlm-1122	162	1	all	all	DET
ajlm-1122	162	2	authors	author	NOUN
ajlm-1122	162	3	have	have	AUX
ajlm-1122	162	4	given	give	VERB
ajlm-1122	162	5	approval	approval	NOUN
ajlm-1122	162	6	to	to	ADP
ajlm-1122	162	7	the	the	DET
ajlm-1122	162	8	final	final	ADJ
ajlm-1122	162	9	version	version	NOUN
ajlm-1122	162	10	of	of	ADP
ajlm-1122	162	11	the	the	DET
ajlm-1122	162	12	manuscript	manuscript	NOUN
ajlm-1122	162	13	.	.	PUNCT
ajlm-1122	163	1	sources	source	NOUN
ajlm-1122	163	2	of	of	ADP
ajlm-1122	163	3	support	support	NOUN
ajlm-1122	163	4	this	this	DET
ajlm-1122	163	5	work	work	NOUN
ajlm-1122	163	6	was	be	AUX
ajlm-1122	163	7	supported	support	VERB
ajlm-1122	163	8	by	by	ADP
ajlm-1122	163	9	the	the	DET
ajlm-1122	163	10	south	south	ADJ
ajlm-1122	163	11	african	african	ADJ
ajlm-1122	163	12	research	research	NOUN
ajlm-1122	163	13	chairs	chair	NOUN
ajlm-1122	163	14	initiative	initiative	NOUN
ajlm-1122	163	15	of	of	ADP
ajlm-1122	163	16	the	the	DET
ajlm-1122	163	17	department	department	NOUN
ajlm-1122	163	18	of	of	ADP
ajlm-1122	163	19	science	science	NOUN
ajlm-1122	163	20	and	and	CCONJ
ajlm-1122	163	21	innovation	innovation	NOUN
ajlm-1122	163	22	and	and	CCONJ
ajlm-1122	163	23	national	national	ADJ
ajlm-1122	163	24	research	research	PROPN
ajlm-1122	163	25	foundation	foundation	PROPN
ajlm-1122	163	26	of	of	ADP
ajlm-1122	163	27	south	south	PROPN
ajlm-1122	163	28	africa	africa	PROPN
ajlm-1122	163	29	(	(	PUNCT
ajlm-1122	163	30	grant	grant	PROPN
ajlm-1122	163	31	uid	uid	PROPN
ajlm-1122	163	32	64751	64751	NUM
ajlm-1122	163	33	)	)	PUNCT
ajlm-1122	163	34	and	and	CCONJ
ajlm-1122	163	35	the	the	DET
ajlm-1122	163	36	south	south	ADJ
ajlm-1122	163	37	african	african	ADJ
ajlm-1122	163	38	medical	medical	PROPN
ajlm-1122	163	39	research	research	PROPN
ajlm-1122	163	40	council	council	PROPN
ajlm-1122	163	41	.	.	PUNCT
ajlm-1122	164	1	data	datum	NOUN
ajlm-1122	164	2	availability	availability	PROPN
ajlm-1122	164	3	mass	mass	PROPN
ajlm-1122	164	4	spectrometry	spectrometry	NOUN
ajlm-1122	164	5	data	datum	NOUN
ajlm-1122	164	6	(	(	PUNCT
ajlm-1122	164	7	with	with	ADP
ajlm-1122	164	8	identification	identification	NOUN
ajlm-1122	164	9	results	result	NOUN
ajlm-1122	164	10	)	)	PUNCT
ajlm-1122	164	11	were	be	AUX
ajlm-1122	164	12	deposited	deposit	VERB
ajlm-1122	164	13	to	to	ADP
ajlm-1122	164	14	the	the	DET
ajlm-1122	164	15	pride	pride	NOUN
ajlm-1122	164	16	archive	archive	NOUN
ajlm-1122	164	17	(	(	PUNCT
ajlm-1122	164	18	http://www.ebi.ac.uk/pride/archive/	http://www.ebi.ac.uk/pride/archive/	PROPN
ajlm-1122	164	19	)	)	PUNCT
ajlm-1122	164	20	via	via	ADP
ajlm-1122	164	21	the	the	DET
ajlm-1122	164	22	pride	pride	NOUN
ajlm-1122	164	23	partner	partner	NOUN
ajlm-1122	164	24	repository	repository	NOUN
ajlm-1122	164	25	with	with	ADP
ajlm-1122	164	26	the	the	DET
ajlm-1122	164	27	identifiers	identifier	NOUN
ajlm-1122	164	28	pxd014419	pxd014419	NOUN
ajlm-1122	164	29	and	and	CCONJ
ajlm-1122	164	30	10.6019	10.6019	NUM
ajlm-1122	164	31	/	/	SYM
ajlm-1122	164	32	pxd014419	pxd014419	X
ajlm-1122	164	33	.	.	PUNCT
ajlm-1122	165	1	disclaimer	disclaimer	VERB
ajlm-1122	165	2	the	the	DET
ajlm-1122	165	3	views	view	NOUN
ajlm-1122	165	4	and	and	CCONJ
ajlm-1122	165	5	opinions	opinion	NOUN
ajlm-1122	165	6	expressed	express	VERB
ajlm-1122	165	7	in	in	ADP
ajlm-1122	165	8	this	this	DET
ajlm-1122	165	9	article	article	NOUN
ajlm-1122	165	10	are	be	AUX
ajlm-1122	165	11	those	those	PRON
ajlm-1122	165	12	of	of	ADP
ajlm-1122	165	13	the	the	DET
ajlm-1122	165	14	authors	author	NOUN
ajlm-1122	165	15	and	and	CCONJ
ajlm-1122	165	16	do	do	AUX
ajlm-1122	165	17	not	not	PART
ajlm-1122	165	18	necessarily	necessarily	ADV
ajlm-1122	165	19	reflect	reflect	VERB
ajlm-1122	165	20	the	the	DET
ajlm-1122	165	21	official	official	ADJ
ajlm-1122	165	22	policy	policy	NOUN
ajlm-1122	165	23	or	or	CCONJ
ajlm-1122	165	24	position	position	NOUN
ajlm-1122	165	25	of	of	ADP
ajlm-1122	165	26	any	any	DET
ajlm-1122	165	27	affiliated	affiliated	ADJ
ajlm-1122	165	28	agency	agency	NOUN
ajlm-1122	165	29	of	of	ADP
ajlm-1122	165	30	the	the	DET
ajlm-1122	165	31	authors	author	NOUN
ajlm-1122	165	32	.	.	PUNCT
ajlm-1122	166	1	references	reference	NOUN
ajlm-1122	166	2	tanca	tanca	VERB
ajlm-1122	166	3	a	a	PRON
ajlm-1122	166	4	,	,	PUNCT
ajlm-1122	166	5	abbondio	abbondio	NOUN
ajlm-1122	166	6	m	m	PROPN
ajlm-1122	166	7	,	,	PUNCT
ajlm-1122	166	8	pisanu	pisanu	PROPN
ajlm-1122	166	9	s	s	PROPN
ajlm-1122	166	10	,	,	PUNCT
ajlm-1122	166	11	et	et	PROPN
ajlm-1122	166	12	al	al	PROPN
ajlm-1122	166	13	.	.	PROPN
ajlm-1122	167	1	critical	critical	ADJ
ajlm-1122	167	2	comparison	comparison	NOUN
ajlm-1122	167	3	of	of	ADP
ajlm-1122	167	4	sample	sample	NOUN
ajlm-1122	167	5	preparation	preparation	NOUN
ajlm-1122	167	6	strategies	strategy	NOUN
ajlm-1122	167	7	for	for	ADP
ajlm-1122	167	8	shotgun	shotgun	NOUN
ajlm-1122	167	9	proteomic	proteomic	ADJ
ajlm-1122	167	10	analysis	analysis	NOUN
ajlm-1122	167	11	of	of	ADP
ajlm-1122	167	12	formalin	formalin	NOUN
ajlm-1122	167	13	-	-	PUNCT
ajlm-1122	167	14	fixed	fix	VERB
ajlm-1122	167	15	,	,	PUNCT
ajlm-1122	167	16	paraffin	paraffin	NOUN
ajlm-1122	167	17	-	-	PUNCT
ajlm-1122	167	18	embedded	embed	VERB
ajlm-1122	167	19	samples	sample	NOUN
ajlm-1122	167	20	:	:	PUNCT
ajlm-1122	167	21	insights	insight	NOUN
ajlm-1122	167	22	from	from	ADP
ajlm-1122	167	23	liver	liver	NOUN
ajlm-1122	167	24	tissue	tissue	NOUN
ajlm-1122	167	25	.	.	PUNCT
ajlm-1122	168	1	clin	clin	PROPN
ajlm-1122	168	2	proteom	proteom	PROPN
ajlm-1122	168	3	.	.	PUNCT
ajlm-1122	169	1	2014;11(28):1–11	2014;11(28):1–11	X
ajlm-1122	169	2	.	.	PUNCT
ajlm-1122	170	1	https://doi.org/10.1186/1559-0275-11-28	https://doi.org/10.1186/1559-0275-11-28	PROPN
ajlm-1122	170	2	gustafsson	gustafsson	PROPN
ajlm-1122	170	3	ojr	ojr	PROPN
ajlm-1122	170	4	,	,	PUNCT
ajlm-1122	170	5	arentz	arentz	VERB
ajlm-1122	170	6	g	g	PROPN
ajlm-1122	170	7	,	,	PUNCT
ajlm-1122	170	8	hoffmann	hoffmann	PROPN
ajlm-1122	170	9	p.	p.	PROPN
ajlm-1122	170	10	proteomic	proteomic	ADJ
ajlm-1122	170	11	developments	development	NOUN
ajlm-1122	170	12	in	in	ADP
ajlm-1122	170	13	the	the	DET
ajlm-1122	170	14	analysis	analysis	NOUN
ajlm-1122	170	15	of	of	ADP
ajlm-1122	170	16	formalin	formalin	NOUN
ajlm-1122	170	17	-	-	PUNCT
ajlm-1122	170	18	fixed	fix	VERB
ajlm-1122	170	19	tissue	tissue	NOUN
ajlm-1122	170	20	.	.	PUNCT
ajlm-1122	171	1	biochim	biochim	PROPN
ajlm-1122	171	2	biophys	biophy	NOUN
ajlm-1122	171	3	acta	acta	PROPN
ajlm-1122	171	4	.	.	PUNCT
ajlm-1122	172	1	2015;1854(6):559–580	2015;1854(6):559–580	PROPN
ajlm-1122	172	2	.	.	PUNCT
ajlm-1122	173	1	https://doi.org/10.1016/j.bbapap.2014.10.003	https://doi.org/10.1016/j.bbapap.2014.10.003	ADJ
ajlm-1122	173	2	shen	shen	PROPN
ajlm-1122	173	3	k	k	PROPN
ajlm-1122	173	4	,	,	PUNCT
ajlm-1122	173	5	sun	sun	PROPN
ajlm-1122	173	6	j	j	PROPN
ajlm-1122	173	7	,	,	PUNCT
ajlm-1122	173	8	cao	cao	PROPN
ajlm-1122	173	9	x	x	PROPN
ajlm-1122	173	10	,	,	PUNCT
ajlm-1122	173	11	et	et	PROPN
ajlm-1122	173	12	al	al	PROPN
ajlm-1122	173	13	.	.	PROPN
ajlm-1122	173	14	comparison	comparison	NOUN
ajlm-1122	173	15	of	of	ADP
ajlm-1122	173	16	different	different	ADJ
ajlm-1122	173	17	buffers	buffer	NOUN
ajlm-1122	173	18	for	for	ADP
ajlm-1122	173	19	protein	protein	NOUN
ajlm-1122	173	20	extraction	extraction	NOUN
ajlm-1122	173	21	from	from	ADP
ajlm-1122	173	22	formalin	formalin	NOUN
ajlm-1122	173	23	-	-	PUNCT
ajlm-1122	173	24	fixed	fix	VERB
ajlm-1122	173	25	and	and	CCONJ
ajlm-1122	173	26	paraffin	paraffin	NOUN
ajlm-1122	173	27	-	-	PUNCT
ajlm-1122	173	28	embedded	embed	VERB
ajlm-1122	173	29	tissue	tissue	NOUN
ajlm-1122	173	30	specimens	specimen	NOUN
ajlm-1122	173	31	.	.	PUNCT
ajlm-1122	174	1	plos	plos	PROPN
ajlm-1122	174	2	one	one	NUM
ajlm-1122	174	3	.	.	PUNCT
ajlm-1122	175	1	2015;10(11):e0142650	2015;10(11):e0142650	NOUN
ajlm-1122	175	2	.	.	PUNCT
ajlm-1122	176	1	https://doi.org/10.1371/journal.pone.0142650	https://doi.org/10.1371/journal.pone.0142650	PROPN
ajlm-1122	176	2	bronsert	bronsert	VERB
ajlm-1122	176	3	p	p	NOUN
ajlm-1122	176	4	,	,	PUNCT
ajlm-1122	176	5	weiber	weiber	PROPN
ajlm-1122	176	6	j	j	PROPN
ajlm-1122	176	7	,	,	PUNCT
ajlm-1122	176	8	biniossek	biniossek	VERB
ajlm-1122	176	9	ml	ml	NOUN
ajlm-1122	176	10	,	,	PUNCT
ajlm-1122	176	11	et	et	PROPN
ajlm-1122	176	12	al	al	PROPN
ajlm-1122	176	13	.	.	PROPN
ajlm-1122	176	14	impact	impact	NOUN
ajlm-1122	176	15	of	of	ADP
ajlm-1122	176	16	routinely	routinely	ADV
ajlm-1122	176	17	employed	employ	VERB
ajlm-1122	176	18	procedures	procedure	NOUN
ajlm-1122	176	19	for	for	ADP
ajlm-1122	176	20	tissue	tissue	NOUN
ajlm-1122	176	21	processing	processing	NOUN
ajlm-1122	176	22	on	on	ADP
ajlm-1122	176	23	the	the	DET
ajlm-1122	176	24	proteomic	proteomic	ADJ
ajlm-1122	176	25	analysis	analysis	NOUN
ajlm-1122	176	26	of	of	ADP
ajlm-1122	176	27	formalin	formalin	NOUN
ajlm-1122	176	28	-	-	PUNCT
ajlm-1122	176	29	fixed	fix	VERB
ajlm-1122	176	30	paraffin	paraffin	NOUN
ajlm-1122	176	31	-	-	PUNCT
ajlm-1122	176	32	embedded	embed	VERB
ajlm-1122	176	33	tissue	tissue	NOUN
ajlm-1122	176	34	.	.	PUNCT
ajlm-1122	177	1	proteom	proteom	PROPN
ajlm-1122	177	2	clin	clin	PROPN
ajlm-1122	177	3	appl	appl	PROPN
ajlm-1122	177	4	.	.	PUNCT
ajlm-1122	178	1	2014;8(9–10):796–804	2014;8(9–10):796–804	NOUN
ajlm-1122	178	2	.	.	PUNCT
ajlm-1122	179	1	https://doi.org/10.1002/prca.201300082	https://doi.org/10.1002/prca.201300082	PROPN
ajlm-1122	179	2	scheerlinck	scheerlinck	PROPN
ajlm-1122	179	3	e	e	PROPN
ajlm-1122	179	4	,	,	PUNCT
ajlm-1122	179	5	dhaenens	dhaenens	PROPN
ajlm-1122	179	6	m	m	PROPN
ajlm-1122	179	7	,	,	PUNCT
ajlm-1122	179	8	van	van	PROPN
ajlm-1122	179	9	soom	soom	PROPN
ajlm-1122	179	10	a	a	PROPN
ajlm-1122	179	11	,	,	PUNCT
ajlm-1122	179	12	et	et	PROPN
ajlm-1122	179	13	al	al	PROPN
ajlm-1122	179	14	.	.	PUNCT
ajlm-1122	180	1	minimizing	minimize	VERB
ajlm-1122	180	2	technical	technical	ADJ
ajlm-1122	180	3	variation	variation	NOUN
ajlm-1122	180	4	during	during	ADP
ajlm-1122	180	5	sample	sample	NOUN
ajlm-1122	180	6	preparation	preparation	NOUN
ajlm-1122	180	7	prior	prior	ADV
ajlm-1122	180	8	to	to	ADP
ajlm-1122	180	9	label	label	NOUN
ajlm-1122	180	10	-	-	PUNCT
ajlm-1122	180	11	free	free	ADJ
ajlm-1122	180	12	quantitative	quantitative	ADJ
ajlm-1122	180	13	mass	mass	NOUN
ajlm-1122	180	14	spectrometry	spectrometry	NOUN
ajlm-1122	180	15	.	.	PUNCT
ajlm-1122	181	1	anal	anal	ADJ
ajlm-1122	181	2	biochem	biochem	PROPN
ajlm-1122	181	3	.	.	PUNCT
ajlm-1122	182	1	2015;490:14–19	2015;490:14–19	PROPN
ajlm-1122	182	2	.	.	PUNCT
ajlm-1122	183	1	https://doi.org/10.1016/j.ab.2015.08.018	https://doi.org/10.1016/j.ab.2015.08.018	VERB
ajlm-1122	183	2	shi	shi	PROPN
ajlm-1122	183	3	s	s	PROPN
ajlm-1122	183	4	-	-	PUNCT
ajlm-1122	183	5	r	r	NOUN
ajlm-1122	183	6	,	,	PUNCT
ajlm-1122	183	7	liu	liu	PROPN
ajlm-1122	183	8	c	c	PROPN
ajlm-1122	183	9	,	,	PUNCT
ajlm-1122	183	10	balgley	balgley	PROPN
ajlm-1122	183	11	bm	bm	PROPN
ajlm-1122	183	12	,	,	PUNCT
ajlm-1122	183	13	et	et	PROPN
ajlm-1122	183	14	al	al	PROPN
ajlm-1122	183	15	.	.	PUNCT
ajlm-1122	183	16	protein	protein	NOUN
ajlm-1122	183	17	extraction	extraction	NOUN
ajlm-1122	183	18	from	from	ADP
ajlm-1122	183	19	formalin	formalin	NOUN
ajlm-1122	183	20	-	-	PUNCT
ajlm-1122	183	21	fixed	fix	VERB
ajlm-1122	183	22	,	,	PUNCT
ajlm-1122	183	23	paraffin	paraffin	NOUN
ajlm-1122	183	24	-	-	PUNCT
ajlm-1122	183	25	embedded	embed	VERB
ajlm-1122	183	26	tissue	tissue	NOUN
ajlm-1122	183	27	sections	section	NOUN
ajlm-1122	183	28	:	:	PUNCT
ajlm-1122	183	29	quality	quality	NOUN
ajlm-1122	183	30	evaluation	evaluation	NOUN
ajlm-1122	183	31	by	by	ADP
ajlm-1122	183	32	mass	mass	ADJ
ajlm-1122	183	33	spectrometry	spectrometry	NOUN
ajlm-1122	183	34	.	.	PUNCT
ajlm-1122	184	1	j	j	PROPN
ajlm-1122	184	2	histochem	histochem	PROPN
ajlm-1122	184	3	cytochem	cytochem	PROPN
ajlm-1122	184	4	.	.	PUNCT
ajlm-1122	185	1	2006;54(6):739–743	2006;54(6):739–743	X
ajlm-1122	185	2	.	.	PUNCT
ajlm-1122	186	1	https://doi.org/10.1369/jhc.5b6851.2006	https://doi.org/10.1369/jhc.5b6851.2006	PROPN
ajlm-1122	186	2	ruderman	ruderman	NOUN
ajlm-1122	186	3	d.	d.	PROPN
ajlm-1122	186	4	designing	design	VERB
ajlm-1122	186	5	successful	successful	ADJ
ajlm-1122	186	6	proteomics	proteomic	NOUN
ajlm-1122	186	7	experiments	experiment	NOUN
ajlm-1122	186	8	.	.	PUNCT
ajlm-1122	187	1	in	in	ADP
ajlm-1122	187	2	:	:	PUNCT
ajlm-1122	187	3	comai	comai	PROPN
ajlm-1122	187	4	l	l	PROPN
ajlm-1122	187	5	,	,	PUNCT
ajlm-1122	187	6	katz	katz	PROPN
ajlm-1122	187	7	je	je	PROPN
ajlm-1122	187	8	,	,	PUNCT
ajlm-1122	187	9	mallick	mallick	PROPN
ajlm-1122	187	10	p	p	PROPN
ajlm-1122	187	11	,	,	PUNCT
ajlm-1122	187	12	editors	editor	NOUN
ajlm-1122	187	13	.	.	PUNCT
ajlm-1122	188	1	proteomics	proteomic	NOUN
ajlm-1122	188	2	:	:	PUNCT
ajlm-1122	188	3	methods	method	NOUN
ajlm-1122	188	4	and	and	CCONJ
ajlm-1122	188	5	protocols	protocol	NOUN
ajlm-1122	188	6	.	.	PUNCT
ajlm-1122	189	1	new	new	PROPN
ajlm-1122	189	2	york	york	PROPN
ajlm-1122	189	3	:	:	PUNCT
ajlm-1122	189	4	humana	humana	PROPN
ajlm-1122	189	5	press	press	PROPN
ajlm-1122	189	6	(	(	PUNCT
ajlm-1122	189	7	springer	springer	NOUN
ajlm-1122	189	8	science+business	science+business	NOUN
ajlm-1122	189	9	media	medium	NOUN
ajlm-1122	189	10	)	)	PUNCT
ajlm-1122	189	11	;	;	PUNCT
ajlm-1122	189	12	2017	2017	NUM
ajlm-1122	189	13	,	,	PUNCT
ajlm-1122	189	14	p.	p.	NOUN
ajlm-1122	189	15	271–288	271–288	NUM
ajlm-1122	189	16	.	.	PUNCT
ajlm-1122	190	1	thompson	thompson	PROPN
ajlm-1122	190	2	sm	sm	PROPN
ajlm-1122	190	3	,	,	PUNCT
ajlm-1122	190	4	craven	craven	PROPN
ajlm-1122	190	5	ra	ra	PROPN
ajlm-1122	190	6	,	,	PUNCT
ajlm-1122	190	7	nirmalan	nirmalan	PROPN
ajlm-1122	190	8	nj	nj	PROPN
ajlm-1122	190	9	,	,	PUNCT
ajlm-1122	190	10	et	et	PROPN
ajlm-1122	190	11	al	al	PROPN
ajlm-1122	190	12	.	.	PROPN
ajlm-1122	190	13	impact	impact	NOUN
ajlm-1122	190	14	of	of	ADP
ajlm-1122	190	15	pre	pre	ADJ
ajlm-1122	190	16	-	-	ADJ
ajlm-1122	190	17	analytical	analytical	ADJ
ajlm-1122	190	18	factors	factor	NOUN
ajlm-1122	190	19	on	on	ADP
ajlm-1122	190	20	the	the	DET
ajlm-1122	190	21	proteomic	proteomic	ADJ
ajlm-1122	190	22	analysis	analysis	NOUN
ajlm-1122	190	23	of	of	ADP
ajlm-1122	190	24	formalin	formalin	NOUN
ajlm-1122	190	25	-	-	PUNCT
ajlm-1122	190	26	fixed	fix	VERB
ajlm-1122	190	27	paraffin	paraffin	NOUN
ajlm-1122	190	28	-	-	PUNCT
ajlm-1122	190	29	embedded	embed	VERB
ajlm-1122	190	30	tissue	tissue	NOUN
ajlm-1122	190	31	.	.	PUNCT
ajlm-1122	191	1	proteom	proteom	PROPN
ajlm-1122	191	2	clin	clin	PROPN
ajlm-1122	191	3	appl	appl	PROPN
ajlm-1122	191	4	.	.	PUNCT
ajlm-1122	192	1	2013;7(3–4):241–251	2013;7(3–4):241–251	NUM
ajlm-1122	192	2	.	.	PUNCT
ajlm-1122	193	1	https://doi.org/10.1002/prca.201200086	https://doi.org/10.1002/prca.201200086	ADJ
ajlm-1122	193	2	magdeldin	magdeldin	PROPN
ajlm-1122	193	3	s	s	PROPN
ajlm-1122	193	4	,	,	PUNCT
ajlm-1122	193	5	yamamoto	yamamoto	PROPN
ajlm-1122	193	6	t.	t.	PROPN
ajlm-1122	193	7	toward	toward	ADP
ajlm-1122	193	8	deciphering	decipher	VERB
ajlm-1122	193	9	proteomes	proteome	NOUN
ajlm-1122	193	10	of	of	ADP
ajlm-1122	193	11	formalinfixed	formalinfixed	ADJ
ajlm-1122	193	12	paraffin	paraffin	NOUN
ajlm-1122	193	13	embedded	embed	VERB
ajlm-1122	193	14	(	(	PUNCT
ajlm-1122	193	15	ffpe	ffpe	NOUN
ajlm-1122	193	16	)	)	PUNCT
ajlm-1122	193	17	tissues	tissue	NOUN
ajlm-1122	193	18	.	.	PUNCT
ajlm-1122	194	1	proteomics	proteomic	NOUN
ajlm-1122	194	2	.	.	PUNCT
ajlm-1122	195	1	2012;12(7):1045–1058	2012;12(7):1045–1058	NUM
ajlm-1122	195	2	.	.	PUNCT
ajlm-1122	196	1	https://doi.org/10.1002/pmic.201100550	https://doi.org/10.1002/pmic.201100550	PROPN
ajlm-1122	196	2	fowler	fowler	PROPN
ajlm-1122	196	3	cb	cb	PROPN
ajlm-1122	196	4	,	,	PUNCT
ajlm-1122	196	5	o’leary	o’leary	PROPN
ajlm-1122	196	6	tj	tj	PROPN
ajlm-1122	196	7	,	,	PUNCT
ajlm-1122	196	8	mason	mason	PROPN
ajlm-1122	196	9	jt	jt	PROPN
ajlm-1122	196	10	.	.	PUNCT
ajlm-1122	197	1	toward	toward	ADP
ajlm-1122	197	2	improving	improve	VERB
ajlm-1122	197	3	the	the	DET
ajlm-1122	197	4	proteomic	proteomic	ADJ
ajlm-1122	197	5	analysis	analysis	NOUN
ajlm-1122	197	6	of	of	ADP
ajlm-1122	197	7	formalin	formalin	NOUN
ajlm-1122	197	8	-	-	PUNCT
ajlm-1122	197	9	fixed	fix	VERB
ajlm-1122	197	10	paraffin	paraffin	NOUN
ajlm-1122	197	11	-	-	PUNCT
ajlm-1122	197	12	embedded	embed	VERB
ajlm-1122	197	13	tissue	tissue	NOUN
ajlm-1122	197	14	.	.	PUNCT
ajlm-1122	198	1	expert	expert	NOUN
ajlm-1122	198	2	rev	rev	PROPN
ajlm-1122	198	3	proteomics	proteomic	NOUN
ajlm-1122	198	4	.	.	PUNCT
ajlm-1122	199	1	2013;10(4):389–400	2013;10(4):389–400	X
ajlm-1122	199	2	.	.	PUNCT
ajlm-1122	200	1	https://doi.org/10.1586/14789450.2013.820531	https://doi.org/10.1586/14789450.2013.820531	PROPN
ajlm-1122	200	2	avaritt	avaritt	PROPN
ajlm-1122	200	3	nl	nl	PROPN
ajlm-1122	200	4	,	,	PUNCT
ajlm-1122	200	5	shalin	shalin	PROPN
ajlm-1122	200	6	s	s	PROPN
ajlm-1122	200	7	,	,	PUNCT
ajlm-1122	200	8	tackett	tackett	PROPN
ajlm-1122	200	9	aj	aj	PROPN
ajlm-1122	200	10	.	.	PROPN
ajlm-1122	201	1	decoding	decode	VERB
ajlm-1122	201	2	the	the	DET
ajlm-1122	201	3	proteome	proteome	NOUN
ajlm-1122	201	4	in	in	ADP
ajlm-1122	201	5	formalin	formalin	NOUN
ajlm-1122	201	6	-	-	PUNCT
ajlm-1122	201	7	fixed	fix	VERB
ajlm-1122	201	8	paraffin	paraffin	NOUN
ajlm-1122	201	9	-	-	PUNCT
ajlm-1122	201	10	embedded	embed	VERB
ajlm-1122	201	11	(	(	PUNCT
ajlm-1122	201	12	ffpe	ffpe	NOUN
ajlm-1122	201	13	)	)	PUNCT
ajlm-1122	201	14	tissues	tissue	NOUN
ajlm-1122	201	15	.	.	PUNCT
ajlm-1122	202	1	j	j	PROPN
ajlm-1122	202	2	proteomics	proteomic	NOUN
ajlm-1122	202	3	bioinform	bioinform	NOUN
ajlm-1122	202	4	.	.	PUNCT
ajlm-1122	203	1	2014;7	2014;7	NUM
ajlm-1122	203	2	:	:	PUNCT
ajlm-1122	203	3	e25	e25	NOUN
ajlm-1122	203	4	.	.	PUNCT
ajlm-1122	204	1	https://doi.org/10.4172/jpb.10000e25	https://doi.org/10.4172/jpb.10000e25	ADJ
ajlm-1122	204	2	rossouw	rossouw	PROPN
ajlm-1122	204	3	sc	sc	PROPN
ajlm-1122	204	4	,	,	PUNCT
ajlm-1122	204	5	bendou	bendou	PROPN
ajlm-1122	204	6	h	h	NOUN
ajlm-1122	204	7	,	,	PUNCT
ajlm-1122	204	8	blignaut	blignaut	PROPN
ajlm-1122	204	9	rj	rj	PROPN
ajlm-1122	204	10	,	,	PUNCT
ajlm-1122	204	11	bell	bell	PROPN
ajlm-1122	204	12	l	l	PROPN
ajlm-1122	204	13	,	,	PUNCT
ajlm-1122	204	14	rigby	rigby	PROPN
ajlm-1122	204	15	j	j	PROPN
ajlm-1122	204	16	,	,	PUNCT
ajlm-1122	204	17	christoffels	christoffels	PROPN
ajlm-1122	204	18	a.	a.	NOUN
ajlm-1122	204	19	evaluation	evaluation	NOUN
ajlm-1122	204	20	of	of	ADP
ajlm-1122	204	21	protein	protein	NOUN
ajlm-1122	204	22	purification	purification	NOUN
ajlm-1122	204	23	techniques	technique	NOUN
ajlm-1122	204	24	and	and	CCONJ
ajlm-1122	204	25	effects	effect	NOUN
ajlm-1122	204	26	of	of	ADP
ajlm-1122	204	27	storage	storage	NOUN
ajlm-1122	204	28	duration	duration	NOUN
ajlm-1122	204	29	on	on	ADP
ajlm-1122	204	30	lc	lc	PROPN
ajlm-1122	204	31	-	-	PUNCT
ajlm-1122	204	32	ms	ms	PROPN
ajlm-1122	204	33	/	/	SYM
ajlm-1122	204	34	ms	ms	NOUN
ajlm-1122	204	35	analysis	analysis	NOUN
ajlm-1122	204	36	of	of	ADP
ajlm-1122	204	37	archived	archive	VERB
ajlm-1122	204	38	ffpe	ffpe	NOUN
ajlm-1122	204	39	human	human	ADJ
ajlm-1122	204	40	crc	crc	NOUN
ajlm-1122	204	41	tissues	tissue	NOUN
ajlm-1122	204	42	.	.	PUNCT
ajlm-1122	205	1	pathol	pathol	VERB
ajlm-1122	205	2	oncol	oncol	ADJ
ajlm-1122	205	3	res	re	NOUN
ajlm-1122	205	4	.	.	PUNCT
ajlm-1122	206	1	2021;27:622855	2021;27:622855	NUM
ajlm-1122	206	2	.	.	PUNCT
ajlm-1122	207	1	https://doi.org10.3389	https://doi.org10.3389	ADJ
ajlm-1122	207	2	/	/	SYM
ajlm-1122	207	3	pore.2021.622855	pore.2021.622855	PROPN
ajlm-1122	207	4	wiśniewski	wiśniewski	PROPN
ajlm-1122	207	5	jr	jr	PROPN
ajlm-1122	207	6	,	,	PUNCT
ajlm-1122	207	7	ostasiewicz	ostasiewicz	NOUN
ajlm-1122	207	8	p	p	X
ajlm-1122	207	9	,	,	PUNCT
ajlm-1122	207	10	mann	mann	PROPN
ajlm-1122	207	11	m.	m.	PROPN
ajlm-1122	207	12	high	high	PROPN
ajlm-1122	207	13	recovery	recovery	NOUN
ajlm-1122	207	14	fasp	fasp	NOUN
ajlm-1122	207	15	applied	apply	VERB
ajlm-1122	207	16	to	to	ADP
ajlm-1122	207	17	the	the	DET
ajlm-1122	207	18	proteomic	proteomic	ADJ
ajlm-1122	207	19	analysis	analysis	NOUN
ajlm-1122	207	20	of	of	ADP
ajlm-1122	207	21	microdissected	microdissected	ADJ
ajlm-1122	207	22	formalin	formalin	NOUN
ajlm-1122	207	23	fixed	fix	VERB
ajlm-1122	207	24	paraffin	paraffin	NOUN
ajlm-1122	207	25	embedded	embed	VERB
ajlm-1122	207	26	cancer	cancer	NOUN
ajlm-1122	207	27	tissues	tissue	NOUN
ajlm-1122	207	28	retrieves	retrieve	VERB
ajlm-1122	207	29	known	know	VERB
ajlm-1122	207	30	colon	colon	NOUN
ajlm-1122	207	31	cancer	cancer	NOUN
ajlm-1122	207	32	markers	marker	NOUN
ajlm-1122	207	33	.	.	PUNCT
ajlm-1122	208	1	j	j	PROPN
ajlm-1122	208	2	proteome	proteome	PROPN
ajlm-1122	208	3	res	re	NOUN
ajlm-1122	208	4	.	.	PUNCT
ajlm-1122	209	1	2011;10(7):3040–3049	2011;10(7):3040–3049	NOUN
ajlm-1122	209	2	.	.	PUNCT
ajlm-1122	210	1	https://doi.org/10.1021/pr200019	https://doi.org/10.1021/pr200019	X
ajlm-1122	210	2	m	m	AUX
ajlm-1122	210	3	busby	busby	NOUN
ajlm-1122	210	4	tf	tf	X
ajlm-1122	210	5	,	,	PUNCT
ajlm-1122	210	6	ingham	ingham	PROPN
ajlm-1122	210	7	kc	kc	PROPN
ajlm-1122	210	8	.	.	PUNCT
ajlm-1122	210	9	removal	removal	NOUN
ajlm-1122	210	10	of	of	ADP
ajlm-1122	210	11	polyethylene	polyethylene	NOUN
ajlm-1122	210	12	glycol	glycol	NOUN
ajlm-1122	210	13	from	from	ADP
ajlm-1122	210	14	proteins	protein	NOUN
ajlm-1122	210	15	by	by	ADP
ajlm-1122	210	16	salt	salt	NOUN
ajlm-1122	210	17	-	-	PUNCT
ajlm-1122	210	18	induced	induce	VERB
ajlm-1122	210	19	phase	phase	NOUN
ajlm-1122	210	20	separation	separation	NOUN
ajlm-1122	210	21	.	.	PUNCT
ajlm-1122	211	1	vox	vox	PROPN
ajlm-1122	211	2	sang	sing	VERB
ajlm-1122	211	3	.	.	PUNCT
ajlm-1122	212	1	1980;39(2):93–100	1980;39(2):93–100	NUM
ajlm-1122	212	2	.	.	PUNCT
ajlm-1122	213	1	https://doi.org/10.1111/j.1423-0410.1980.tb01843.x	https://doi.org/10.1111/j.1423-0410.1980.tb01843.x	PROPN
ajlm-1122	213	2	juckes	juckes	PROPN
ajlm-1122	213	3	irm	irm	PROPN
ajlm-1122	213	4	.	.	PUNCT
ajlm-1122	214	1	fractionation	fractionation	NOUN
ajlm-1122	214	2	of	of	ADP
ajlm-1122	214	3	proteins	protein	NOUN
ajlm-1122	214	4	and	and	CCONJ
ajlm-1122	214	5	viruses	virus	NOUN
ajlm-1122	214	6	with	with	ADP
ajlm-1122	214	7	polyethylene	polyethylene	NOUN
ajlm-1122	214	8	glycol	glycol	NOUN
ajlm-1122	214	9	.	.	PUNCT
ajlm-1122	215	1	biochim	biochim	PROPN
ajlm-1122	215	2	biophys	biophy	NOUN
ajlm-1122	215	3	acta	acta	PROPN
ajlm-1122	215	4	.	.	PUNCT
ajlm-1122	216	1	1971;229(3):535–546	1971;229(3):535–546	NUM
ajlm-1122	216	2	.	.	PUNCT
ajlm-1122	216	3	https://doi.org/10.1016/0005-2795(71)90269-8	https://doi.org/10.1016/0005-2795(71)90269-8	PROPN
ajlm-1122	216	4	foster	foster	ADJ
ajlm-1122	216	5	pr	pr	NOUN
ajlm-1122	216	6	,	,	PUNCT
ajlm-1122	216	7	dunnill	dunnill	PROPN
ajlm-1122	216	8	p	p	X
ajlm-1122	216	9	,	,	PUNCT
ajlm-1122	216	10	lilly	lilly	PROPN
ajlm-1122	216	11	md	md	PROPN
ajlm-1122	216	12	.	.	PUNCT
ajlm-1122	217	1	the	the	DET
ajlm-1122	217	2	precipitation	precipitation	NOUN
ajlm-1122	217	3	of	of	ADP
ajlm-1122	217	4	enzymes	enzyme	NOUN
ajlm-1122	217	5	from	from	ADP
ajlm-1122	217	6	cell	cell	NOUN
ajlm-1122	217	7	extracts	extract	NOUN
ajlm-1122	217	8	of	of	ADP
ajlm-1122	217	9	saccharomyces	saccharomyce	NOUN
ajlm-1122	217	10	cerevisiae	cerevisiae	NOUN
ajlm-1122	217	11	by	by	ADP
ajlm-1122	217	12	polyethyleneglycol	polyethyleneglycol	PROPN
ajlm-1122	217	13	.	.	PUNCT
ajlm-1122	218	1	biochim	biochim	PROPN
ajlm-1122	218	2	biophys	biophy	NOUN
ajlm-1122	218	3	acta	acta	PROPN
ajlm-1122	218	4	.	.	PUNCT
ajlm-1122	219	1	1973;317(2):505–516	1973;317(2):505–516	NUM
ajlm-1122	219	2	.	.	PUNCT
ajlm-1122	220	1	https://doi.org/10.1016/0005-2795(73)90243-2	https://doi.org/10.1016/0005-2795(73)90243-2	PROPN
ajlm-1122	220	2	feist	feist	PROPN
ajlm-1122	220	3	p	p	PROPN
ajlm-1122	220	4	,	,	PUNCT
ajlm-1122	220	5	hummon	hummon	PROPN
ajlm-1122	220	6	ab	ab	PROPN
ajlm-1122	220	7	.	.	PROPN
ajlm-1122	221	1	proteomic	proteomic	ADJ
ajlm-1122	221	2	challenges	challenge	NOUN
ajlm-1122	221	3	:	:	PUNCT
ajlm-1122	221	4	sample	sample	NOUN
ajlm-1122	221	5	preparation	preparation	NOUN
ajlm-1122	221	6	techniques	technique	NOUN
ajlm-1122	221	7	for	for	ADP
ajlm-1122	221	8	microgram	microgram	ADJ
ajlm-1122	221	9	-	-	PUNCT
ajlm-1122	221	10	quantity	quantity	NOUN
ajlm-1122	221	11	protein	protein	NOUN
ajlm-1122	221	12	analysis	analysis	NOUN
ajlm-1122	221	13	from	from	ADP
ajlm-1122	221	14	biological	biological	ADJ
ajlm-1122	221	15	samples	sample	NOUN
ajlm-1122	221	16	.	.	PUNCT
ajlm-1122	222	1	int	int	PROPN
ajlm-1122	222	2	j	j	PROPN
ajlm-1122	222	3	mol	mol	ADP
ajlm-1122	222	4	sci	sci	PROPN
ajlm-1122	222	5	.	.	PUNCT
ajlm-1122	223	1	2015;16(2):3537–3563	2015;16(2):3537–3563	PROPN
ajlm-1122	223	2	.	.	PUNCT
ajlm-1122	224	1	https://doi.org/10.3390/ijms16023537	https://doi.org/10.3390/ijms16023537	PROPN
ajlm-1122	224	2	zhao	zhao	PROPN
ajlm-1122	224	3	c	c	PROPN
ajlm-1122	224	4	,	,	PUNCT
ajlm-1122	224	5	o’connor	o’connor	ADV
ajlm-1122	224	6	pb	pb	PROPN
ajlm-1122	224	7	.	.	PUNCT
ajlm-1122	225	1	removal	removal	NOUN
ajlm-1122	225	2	of	of	ADP
ajlm-1122	225	3	polyethylene	polyethylene	NOUN
ajlm-1122	225	4	glycols	glycol	NOUN
ajlm-1122	225	5	from	from	ADP
ajlm-1122	225	6	protein	protein	NOUN
ajlm-1122	225	7	samples	sample	NOUN
ajlm-1122	225	8	using	use	VERB
ajlm-1122	225	9	titanium	titanium	NOUN
ajlm-1122	225	10	dioxide	dioxide	NOUN
ajlm-1122	225	11	.	.	PUNCT
ajlm-1122	226	1	anal	anal	ADJ
ajlm-1122	226	2	biochem	biochem	PROPN
ajlm-1122	226	3	.	.	PUNCT
ajlm-1122	227	1	2007:365(2):283–285	2007:365(2):283–285	NUM
ajlm-1122	227	2	.	.	PUNCT
ajlm-1122	228	1	https://doi.org/10.1016/j.ab.2007.03.024	https://doi.org/10.1016/j.ab.2007.03.024	PROPN
ajlm-1122	228	2	hughes	hughes	PROPN
ajlm-1122	228	3	cs	cs	PROPN
ajlm-1122	228	4	,	,	PUNCT
ajlm-1122	228	5	foehr	foehr	NOUN
ajlm-1122	228	6	s	s	PROPN
ajlm-1122	228	7	,	,	PUNCT
ajlm-1122	228	8	garfield	garfield	PROPN
ajlm-1122	228	9	da	da	PROPN
ajlm-1122	228	10	,	,	PUNCT
ajlm-1122	228	11	et	et	PROPN
ajlm-1122	228	12	al	al	PROPN
ajlm-1122	228	13	.	.	PROPN
ajlm-1122	228	14	ultrasensitive	ultrasensitive	ADJ
ajlm-1122	228	15	proteome	proteome	NOUN
ajlm-1122	228	16	analysis	analysis	NOUN
ajlm-1122	228	17	using	use	VERB
ajlm-1122	228	18	paramagnetic	paramagnetic	ADJ
ajlm-1122	228	19	bead	bead	NOUN
ajlm-1122	228	20	technology	technology	NOUN
ajlm-1122	228	21	.	.	PUNCT
ajlm-1122	229	1	mol	mol	ADP
ajlm-1122	229	2	syst	syst	PROPN
ajlm-1122	229	3	biol	biol	PROPN
ajlm-1122	229	4	.	.	PUNCT
ajlm-1122	230	1	2014:10(10):1–10	2014:10(10):1–10	X
ajlm-1122	230	2	.	.	PUNCT
ajlm-1122	231	1	https://doi.org/10.15252/msb.20145625	https://doi.org/10.15252/msb.20145625	NOUN
ajlm-1122	231	2	hughes	hughes	PROPN
ajlm-1122	231	3	cs	cs	PROPN
ajlm-1122	231	4	,	,	PUNCT
ajlm-1122	231	5	sorensen	sorensen	PROPN
ajlm-1122	231	6	ph	ph	PROPN
ajlm-1122	231	7	,	,	PUNCT
ajlm-1122	231	8	morin	morin	NOUN
ajlm-1122	231	9	gb	gb	NOUN
ajlm-1122	231	10	.	.	PUNCT
ajlm-1122	232	1	a	a	DET
ajlm-1122	232	2	standardized	standardized	ADJ
ajlm-1122	232	3	and	and	CCONJ
ajlm-1122	232	4	reproducible	reproducible	ADJ
ajlm-1122	232	5	proteomics	proteomic	NOUN
ajlm-1122	232	6	protocol	protocol	NOUN
ajlm-1122	232	7	for	for	ADP
ajlm-1122	232	8	bottom	bottom	ADJ
ajlm-1122	232	9	-	-	PUNCT
ajlm-1122	232	10	up	up	NOUN
ajlm-1122	232	11	quantitative	quantitative	ADJ
ajlm-1122	232	12	analysis	analysis	NOUN
ajlm-1122	232	13	of	of	ADP
ajlm-1122	232	14	protein	protein	NOUN
ajlm-1122	232	15	samples	sample	NOUN
ajlm-1122	232	16	using	use	VERB
ajlm-1122	232	17	sp3	sp3	ADJ
ajlm-1122	232	18	and	and	CCONJ
ajlm-1122	232	19	mass	mass	ADJ
ajlm-1122	232	20	spectrometry	spectrometry	NOUN
ajlm-1122	232	21	.	.	PUNCT
ajlm-1122	233	1	in	in	ADP
ajlm-1122	233	2	:	:	PUNCT
ajlm-1122	233	3	brun	brun	PROPN
ajlm-1122	233	4	v	v	PROPN
ajlm-1122	233	5	,	,	PUNCT
ajlm-1122	233	6	coute	coute	PROPN
ajlm-1122	233	7	´	´	PROPN
ajlm-1122	233	8	y	y	PROPN
ajlm-1122	233	9	,	,	PUNCT
ajlm-1122	233	10	editors	editor	NOUN
ajlm-1122	233	11	.	.	PUNCT
ajlm-1122	234	1	proteomics	proteomic	NOUN
ajlm-1122	234	2	for	for	ADP
ajlm-1122	234	3	biomarker	biomarker	NOUN
ajlm-1122	234	4	discovery	discovery	NOUN
ajlm-1122	234	5	:	:	PUNCT
ajlm-1122	234	6	methods	method	NOUN
ajlm-1122	234	7	and	and	CCONJ
ajlm-1122	234	8	protocols	protocol	NOUN
ajlm-1122	234	9	,	,	PUNCT
ajlm-1122	234	10	methods	method	NOUN
ajlm-1122	234	11	in	in	ADP
ajlm-1122	234	12	molecular	molecular	ADJ
ajlm-1122	234	13	biology	biology	NOUN
ajlm-1122	234	14	,	,	PUNCT
ajlm-1122	234	15	vol	vol	NOUN
ajlm-1122	234	16	.	.	PROPN
ajlm-1122	234	17	1959	1959	NUM
ajlm-1122	234	18	.	.	PUNCT
ajlm-1122	235	1	new	new	PROPN
ajlm-1122	235	2	york	york	PROPN
ajlm-1122	235	3	,	,	PUNCT
ajlm-1122	235	4	ny	ny	PROPN
ajlm-1122	235	5	:	:	PUNCT
ajlm-1122	235	6	springer	springer	NOUN
ajlm-1122	235	7	nature	nature	NOUN
ajlm-1122	235	8	;	;	PUNCT
ajlm-1122	235	9	2019	2019	NUM
ajlm-1122	235	10	,	,	PUNCT
ajlm-1122	235	11	p.	p.	NOUN
ajlm-1122	235	12	65–87	65–87	PROPN
ajlm-1122	235	13	.	.	PUNCT
ajlm-1122	236	1	scicchitano	scicchitano	PROPN
ajlm-1122	236	2	ms	ms	PROPN
ajlm-1122	236	3	,	,	PUNCT
ajlm-1122	236	4	dalmas	dalmas	PROPN
ajlm-1122	236	5	da	da	PROPN
ajlm-1122	236	6	,	,	PUNCT
ajlm-1122	236	7	boyce	boyce	PROPN
ajlm-1122	236	8	rw	rw	PROPN
ajlm-1122	236	9	,	,	PUNCT
ajlm-1122	236	10	et	et	PROPN
ajlm-1122	236	11	al	al	PROPN
ajlm-1122	236	12	.	.	PUNCT
ajlm-1122	236	13	protein	protein	NOUN
ajlm-1122	236	14	extraction	extraction	NOUN
ajlm-1122	236	15	of	of	ADP
ajlm-1122	236	16	formalin	formalin	NOUN
ajlm-1122	236	17	-	-	PUNCT
ajlm-1122	236	18	fixed	fix	VERB
ajlm-1122	236	19	,	,	PUNCT
ajlm-1122	236	20	paraffin	paraffin	NOUN
ajlm-1122	236	21	-	-	PUNCT
ajlm-1122	236	22	embedded	embed	VERB
ajlm-1122	236	23	tissue	tissue	NOUN
ajlm-1122	236	24	enables	enable	VERB
ajlm-1122	236	25	robust	robust	ADJ
ajlm-1122	236	26	proteomic	proteomic	ADJ
ajlm-1122	236	27	profiles	profile	NOUN
ajlm-1122	236	28	by	by	ADP
ajlm-1122	236	29	mass	mass	ADJ
ajlm-1122	236	30	spectrometry	spectrometry	NOUN
ajlm-1122	236	31	.	.	PUNCT
ajlm-1122	237	1	j	j	PROPN
ajlm-1122	237	2	histochem	histochem	PROPN
ajlm-1122	237	3	cytochem	cytochem	PROPN
ajlm-1122	237	4	.	.	PUNCT
ajlm-1122	238	1	2009;57(9):849–860	2009;57(9):849–860	NOUN
ajlm-1122	238	2	.	.	PUNCT
ajlm-1122	239	1	https://doi.org/10.1369/jhc.2009.953497	https://doi.org/10.1369/jhc.2009.953497	ADJ
ajlm-1122	239	2	wiśniewski	wiśniewski	PROPN
ajlm-1122	239	3	jr	jr	PROPN
ajlm-1122	239	4	.	.	PROPN
ajlm-1122	240	1	proteomic	proteomic	ADJ
ajlm-1122	240	2	sample	sample	NOUN
ajlm-1122	240	3	preparation	preparation	NOUN
ajlm-1122	240	4	from	from	ADP
ajlm-1122	240	5	formalin	formalin	NOUN
ajlm-1122	240	6	fixed	fix	VERB
ajlm-1122	240	7	and	and	CCONJ
ajlm-1122	240	8	paraffin	paraffin	NOUN
ajlm-1122	240	9	embedded	embed	VERB
ajlm-1122	240	10	tissue	tissue	NOUN
ajlm-1122	240	11	.	.	PUNCT
ajlm-1122	241	1	j	j	PROPN
ajlm-1122	241	2	vis	vis	X
ajlm-1122	241	3	exp	exp	PROPN
ajlm-1122	241	4	.	.	PROPN
ajlm-1122	241	5	2013;79:1–6	2013;79:1–6	NUM
ajlm-1122	241	6	.	.	PUNCT
ajlm-1122	242	1	https://doi.org/10.3791/50589	https://doi.org/10.3791/50589	NOUN
ajlm-1122	242	2	kessner	kessner	PROPN
ajlm-1122	242	3	d	d	PROPN
ajlm-1122	242	4	,	,	PUNCT
ajlm-1122	242	5	chambers	chambers	PROPN
ajlm-1122	242	6	m	m	PROPN
ajlm-1122	242	7	,	,	PUNCT
ajlm-1122	242	8	burke	burke	PROPN
ajlm-1122	242	9	r	r	PROPN
ajlm-1122	242	10	,	,	PUNCT
ajlm-1122	242	11	et	et	PROPN
ajlm-1122	242	12	al	al	PROPN
ajlm-1122	242	13	.	.	PUNCT
ajlm-1122	242	14	proteowizard	proteowizard	PROPN
ajlm-1122	242	15	:	:	PUNCT
ajlm-1122	242	16	open	open	ADJ
ajlm-1122	242	17	source	source	NOUN
ajlm-1122	242	18	software	software	NOUN
ajlm-1122	242	19	for	for	ADP
ajlm-1122	242	20	rapid	rapid	ADJ
ajlm-1122	242	21	proteomics	proteomic	NOUN
ajlm-1122	242	22	tools	tool	NOUN
ajlm-1122	242	23	development	development	NOUN
ajlm-1122	242	24	.	.	PUNCT
ajlm-1122	243	1	bioinformatics	bioinformatic	NOUN
ajlm-1122	243	2	.	.	PUNCT
ajlm-1122	244	1	2008;24(21):2534–2536	2008;24(21):2534–2536	NOUN
ajlm-1122	244	2	.	.	PUNCT
ajlm-1122	245	1	https://doi.org/10.1093/bioinformatics/btn323	https://doi.org/10.1093/bioinformatics/btn323	PROPN
ajlm-1122	245	2	craig	craig	PROPN
ajlm-1122	245	3	r	r	PROPN
ajlm-1122	245	4	,	,	PUNCT
ajlm-1122	245	5	beavis	beavis	PROPN
ajlm-1122	245	6	rc	rc	PROPN
ajlm-1122	245	7	.	.	PROPN
ajlm-1122	245	8	tandem	tandem	PROPN
ajlm-1122	245	9	:	:	PUNCT
ajlm-1122	245	10	matching	match	VERB
ajlm-1122	245	11	proteins	protein	NOUN
ajlm-1122	245	12	with	with	ADP
ajlm-1122	245	13	tandem	tandem	PROPN
ajlm-1122	245	14	mass	mass	PROPN
ajlm-1122	245	15	spectra	spectra	PROPN
ajlm-1122	245	16	.	.	PUNCT
ajlm-1122	246	1	bioinformatics	bioinformatic	NOUN
ajlm-1122	246	2	.	.	PUNCT
ajlm-1122	247	1	2004;20(9):1466–1467	2004;20(9):1466–1467	NUM
ajlm-1122	247	2	.	.	PUNCT
ajlm-1122	248	1	https://doi.org/10.1093/bioinformatics/bth092	https://doi.org/10.1093/bioinformatics/bth092	PROPN
ajlm-1122	248	2	dorfer	dorfer	VERB
ajlm-1122	248	3	v	v	NOUN
ajlm-1122	248	4	,	,	PUNCT
ajlm-1122	248	5	pichler	pichler	NOUN
ajlm-1122	248	6	p	p	NOUN
ajlm-1122	248	7	,	,	PUNCT
ajlm-1122	248	8	stranzl	stranzl	PROPN
ajlm-1122	248	9	t	t	PROPN
ajlm-1122	248	10	,	,	PUNCT
ajlm-1122	248	11	et	et	PROPN
ajlm-1122	248	12	al	al	PROPN
ajlm-1122	248	13	.	.	PUNCT
ajlm-1122	249	1	ms	ms	PROPN
ajlm-1122	249	2	amanda	amanda	PROPN
ajlm-1122	249	3	,	,	PUNCT
ajlm-1122	249	4	a	a	DET
ajlm-1122	249	5	universal	universal	ADJ
ajlm-1122	249	6	identification	identification	NOUN
ajlm-1122	249	7	algorithm	algorithm	NOUN
ajlm-1122	249	8	optimized	optimize	VERB
ajlm-1122	249	9	for	for	ADP
ajlm-1122	249	10	high	high	ADJ
ajlm-1122	249	11	accuracy	accuracy	NOUN
ajlm-1122	249	12	tandem	tandem	PROPN
ajlm-1122	249	13	mass	mass	PROPN
ajlm-1122	249	14	spectra	spectra	PROPN
ajlm-1122	249	15	.	.	PUNCT
ajlm-1122	250	1	j	j	PROPN
ajlm-1122	250	2	proteome	proteome	PROPN
ajlm-1122	250	3	res	re	NOUN
ajlm-1122	250	4	.	.	PUNCT
ajlm-1122	251	1	2014;13(8):3679–3684	2014;13(8):3679–3684	NUM
ajlm-1122	251	2	.	.	PUNCT
ajlm-1122	252	1	https://doi.org/10.1021/pr500202e	https://doi.org/10.1021/pr500202e	PROPN
ajlm-1122	253	1	kim	kim	PROPN
ajlm-1122	253	2	s	s	PROPN
ajlm-1122	253	3	,	,	PUNCT
ajlm-1122	253	4	pevzner	pevzner	PROPN
ajlm-1122	253	5	pa	pa	PROPN
ajlm-1122	253	6	.	.	PUNCT
ajlm-1122	254	1	ms	ms	PROPN
ajlm-1122	254	2	-	-	PUNCT
ajlm-1122	254	3	gf+	gf+	NOUN
ajlm-1122	254	4	makes	make	VERB
ajlm-1122	254	5	progress	progress	NOUN
ajlm-1122	254	6	towards	towards	ADP
ajlm-1122	254	7	a	a	DET
ajlm-1122	254	8	universal	universal	ADJ
ajlm-1122	254	9	database	database	NOUN
ajlm-1122	254	10	search	search	NOUN
ajlm-1122	254	11	tool	tool	NOUN
ajlm-1122	254	12	for	for	ADP
ajlm-1122	254	13	proteomics	proteomic	NOUN
ajlm-1122	254	14	.	.	PUNCT
ajlm-1122	255	1	nat	nat	PROPN
ajlm-1122	255	2	commun	commun	PROPN
ajlm-1122	255	3	.	.	PUNCT
ajlm-1122	256	1	2014;5:5277	2014;5:5277	NOUN
ajlm-1122	256	2	.	.	PUNCT
ajlm-1122	257	1	https://doi.org/10.1038/ncomms6277	https://doi.org/10.1038/ncomms6277	PROPN
ajlm-1122	257	2	vaudel	vaudel	PROPN
ajlm-1122	257	3	m	m	PROPN
ajlm-1122	257	4	,	,	PUNCT
ajlm-1122	257	5	barsnes	barsne	NOUN
ajlm-1122	257	6	h	h	NOUN
ajlm-1122	257	7	,	,	PUNCT
ajlm-1122	257	8	berven	berven	PROPN
ajlm-1122	257	9	fs	fs	PROPN
ajlm-1122	257	10	,	,	PUNCT
ajlm-1122	257	11	et	et	PROPN
ajlm-1122	257	12	al	al	PROPN
ajlm-1122	257	13	.	.	PROPN
ajlm-1122	257	14	searchgui	searchgui	PROPN
ajlm-1122	257	15	:	:	PUNCT
ajlm-1122	257	16	an	an	DET
ajlm-1122	257	17	open	open	ADJ
ajlm-1122	257	18	-	-	PUNCT
ajlm-1122	257	19	source	source	NOUN
ajlm-1122	257	20	graphical	graphical	ADJ
ajlm-1122	257	21	user	user	NOUN
ajlm-1122	257	22	interface	interface	NOUN
ajlm-1122	257	23	for	for	ADP
ajlm-1122	257	24	simultaneous	simultaneous	ADJ
ajlm-1122	257	25	omssa	omssa	NOUN
ajlm-1122	257	26	and	and	CCONJ
ajlm-1122	257	27	x!tandem	x!tandem	PROPN
ajlm-1122	257	28	searches	search	NOUN
ajlm-1122	257	29	.	.	PUNCT
ajlm-1122	258	1	proteomics	proteomic	NOUN
ajlm-1122	258	2	.	.	PUNCT
ajlm-1122	259	1	2011;11(5):996–999	2011;11(5):996–999	NUM
ajlm-1122	259	2	.	.	PUNCT
ajlm-1122	260	1	https://doi.org/10.1002/pmic.201000595	https://doi.org/10.1002/pmic.201000595	PROPN
ajlm-1122	260	2	elias	elias	PROPN
ajlm-1122	260	3	je	je	PROPN
ajlm-1122	260	4	,	,	PUNCT
ajlm-1122	260	5	gygi	gygi	PROPN
ajlm-1122	260	6	sp	sp	PROPN
ajlm-1122	260	7	.	.	PROPN
ajlm-1122	260	8	target	target	NOUN
ajlm-1122	260	9	-	-	PUNCT
ajlm-1122	260	10	decoy	decoy	NOUN
ajlm-1122	260	11	search	search	NOUN
ajlm-1122	260	12	strategy	strategy	NOUN
ajlm-1122	260	13	for	for	ADP
ajlm-1122	260	14	mass	mass	ADJ
ajlm-1122	260	15	spectrometry	spectrometry	NOUN
ajlm-1122	260	16	-	-	PUNCT
ajlm-1122	260	17	based	base	VERB
ajlm-1122	260	18	proteomics	proteomic	NOUN
ajlm-1122	260	19	.	.	PUNCT
ajlm-1122	261	1	methods	method	NOUN
ajlm-1122	261	2	mol	mol	ADP
ajlm-1122	261	3	biol	biol	PROPN
ajlm-1122	261	4	.	.	PUNCT
ajlm-1122	262	1	2010;604:55–71	2010;604:55–71	NUM
ajlm-1122	262	2	.	.	PUNCT
ajlm-1122	263	1	https://doi.org/10.1007/978-1-60761-444-9_5	https://doi.org/10.1007/978-1-60761-444-9_5	PROPN
ajlm-1122	263	2	apweiler	apweiler	NOUN
ajlm-1122	263	3	r	r	NOUN
ajlm-1122	263	4	,	,	PUNCT
ajlm-1122	263	5	bairoch	bairoch	NOUN
ajlm-1122	263	6	a	a	NOUN
ajlm-1122	263	7	,	,	PUNCT
ajlm-1122	263	8	wu	wu	PROPN
ajlm-1122	263	9	ch	ch	PROPN
ajlm-1122	263	10	,	,	PUNCT
ajlm-1122	263	11	et	et	PROPN
ajlm-1122	263	12	al	al	PROPN
ajlm-1122	263	13	.	.	PROPN
ajlm-1122	264	1	uniprot	uniprot	PROPN
ajlm-1122	264	2	:	:	PUNCT
ajlm-1122	265	1	the	the	DET
ajlm-1122	265	2	universal	universal	ADJ
ajlm-1122	265	3	protein	protein	NOUN
ajlm-1122	265	4	knowledgebase	knowledgebase	PROPN
ajlm-1122	265	5	.	.	PUNCT
ajlm-1122	266	1	nucleic	nucleic	ADJ
ajlm-1122	266	2	acids	acid	NOUN
ajlm-1122	266	3	res	re	NOUN
ajlm-1122	266	4	.	.	PUNCT
ajlm-1122	267	1	2004;32	2004;32	NUM
ajlm-1122	267	2	:	:	PUNCT
ajlm-1122	267	3	d115	d115	PROPN
ajlm-1122	267	4	–	–	PUNCT
ajlm-1122	267	5	d119	d119	PROPN
ajlm-1122	267	6	.	.	PUNCT
ajlm-1122	268	1	https://doi.org/10.1093/nar/gkh131	https://doi.org/10.1093/nar/gkh131	VERB
ajlm-1122	268	2	vaudel	vaudel	PROPN
ajlm-1122	268	3	m	m	PROPN
ajlm-1122	268	4	,	,	PUNCT
ajlm-1122	268	5	burkhart	burkhart	PROPN
ajlm-1122	268	6	jm	jm	PROPN
ajlm-1122	268	7	,	,	PUNCT
ajlm-1122	268	8	zahedi	zahedi	PROPN
ajlm-1122	268	9	rp	rp	PROPN
ajlm-1122	268	10	,	,	PUNCT
ajlm-1122	268	11	et	et	PROPN
ajlm-1122	268	12	al	al	PROPN
ajlm-1122	268	13	.	.	PUNCT
ajlm-1122	269	1	peptideshaker	peptideshaker	PROPN
ajlm-1122	269	2	enables	enable	VERB
ajlm-1122	269	3	reanalysis	reanalysi	NOUN
ajlm-1122	269	4	of	of	ADP
ajlm-1122	269	5	ms	ms	ADJ
ajlm-1122	269	6	-	-	PUNCT
ajlm-1122	269	7	derived	derive	VERB
ajlm-1122	269	8	proteomics	proteomic	NOUN
ajlm-1122	269	9	data	datum	NOUN
ajlm-1122	269	10	sets	set	NOUN
ajlm-1122	269	11	.	.	PUNCT
ajlm-1122	270	1	nat	nat	NOUN
ajlm-1122	270	2	biotech	biotech	NOUN
ajlm-1122	270	3	.	.	PUNCT
ajlm-1122	271	1	2015;33(1):22–24	2015;33(1):22–24	X
ajlm-1122	271	2	.	.	PUNCT
ajlm-1122	272	1	https://doi.org/10.1038/nbt.3109	https://doi.org/10.1038/nbt.3109	VERB
ajlm-1122	272	2	vaudel	vaudel	PROPN
ajlm-1122	272	3	m	m	PROPN
ajlm-1122	272	4	,	,	PUNCT
ajlm-1122	272	5	breiter	breiter	NOUN
ajlm-1122	272	6	d	d	PROPN
ajlm-1122	272	7	,	,	PUNCT
ajlm-1122	272	8	beck	beck	PROPN
ajlm-1122	272	9	f	f	PROPN
ajlm-1122	272	10	,	,	PUNCT
ajlm-1122	272	11	et	et	PROPN
ajlm-1122	272	12	al	al	PROPN
ajlm-1122	272	13	.	.	PUNCT
ajlm-1122	273	1	dscore	dscore	PROPN
ajlm-1122	273	2	:	:	PUNCT
ajlm-1122	273	3	a	a	DET
ajlm-1122	273	4	search	search	NOUN
ajlm-1122	273	5	engine	engine	NOUN
ajlm-1122	273	6	independent	independent	ADJ
ajlm-1122	273	7	md	md	PROPN
ajlm-1122	273	8	-	-	PUNCT
ajlm-1122	273	9	score	score	NOUN
ajlm-1122	273	10	.	.	PUNCT
ajlm-1122	274	1	proteomics	proteomic	NOUN
ajlm-1122	274	2	.	.	PUNCT
ajlm-1122	275	1	2013;13(6):1036–1041	2013;13(6):1036–1041	NUM
ajlm-1122	275	2	.	.	PUNCT
ajlm-1122	276	1	https://doi.org/10.1002/pmic.201200408	https://doi.org/10.1002/pmic.201200408	NUM
ajlm-1122	276	2	taus	taus	PROPN
ajlm-1122	276	3	t	t	PROPN
ajlm-1122	276	4	,	,	PUNCT
ajlm-1122	276	5	kocher	kocher	PROPN
ajlm-1122	276	6	t	t	PROPN
ajlm-1122	276	7	,	,	PUNCT
ajlm-1122	276	8	pichler	pichler	NOUN
ajlm-1122	276	9	p	p	NOUN
ajlm-1122	276	10	,	,	PUNCT
ajlm-1122	276	11	et	et	PROPN
ajlm-1122	276	12	al	al	PROPN
ajlm-1122	276	13	.	.	PROPN
ajlm-1122	277	1	universal	universal	ADJ
ajlm-1122	277	2	and	and	CCONJ
ajlm-1122	277	3	confident	confident	ADJ
ajlm-1122	277	4	phosphorylation	phosphorylation	NOUN
ajlm-1122	277	5	site	site	NOUN
ajlm-1122	277	6	localization	localization	NOUN
ajlm-1122	277	7	using	use	VERB
ajlm-1122	277	8	phosphors	phosphor	NOUN
ajlm-1122	277	9	.	.	PUNCT
ajlm-1122	278	1	j.	j.	PROPN
ajlm-1122	278	2	proteome	proteome	PROPN
ajlm-1122	278	3	res	re	NOUN
ajlm-1122	278	4	.	.	PUNCT
ajlm-1122	279	1	2011;10(12):5354–5362	2011;10(12):5354–5362	NUM
ajlm-1122	279	2	.	.	PUNCT
ajlm-1122	280	1	https://doi.org/10.1021/pr200611n	https://doi.org/10.1021/pr200611n	PROPN
ajlm-1122	280	2	barsnes	barsne	NOUN
ajlm-1122	280	3	h	h	NOUN
ajlm-1122	280	4	,	,	PUNCT
ajlm-1122	280	5	vaudel	vaudel	PROPN
ajlm-1122	280	6	m	m	PROPN
ajlm-1122	280	7	,	,	PUNCT
ajlm-1122	280	8	colaert	colaert	PROPN
ajlm-1122	280	9	n	n	CCONJ
ajlm-1122	280	10	,	,	PUNCT
ajlm-1122	280	11	et	et	PROPN
ajlm-1122	280	12	al	al	PROPN
ajlm-1122	280	13	.	.	PUNCT
ajlm-1122	281	1	compomics	compomic	NOUN
ajlm-1122	281	2	-	-	PUNCT
ajlm-1122	281	3	utilities	utilities	PROPN
ajlm-1122	281	4	:	:	PUNCT
ajlm-1122	281	5	an	an	DET
ajlm-1122	281	6	open	open	ADJ
ajlm-1122	281	7	-	-	PUNCT
ajlm-1122	281	8	source	source	NOUN
ajlm-1122	281	9	java	java	PROPN
ajlm-1122	281	10	library	library	NOUN
ajlm-1122	281	11	for	for	ADP
ajlm-1122	281	12	computational	computational	ADJ
ajlm-1122	281	13	proteomics	proteomic	NOUN
ajlm-1122	281	14	.	.	PUNCT
ajlm-1122	282	1	bmc	bmc	PROPN
ajlm-1122	282	2	bioinf	bioinf	PROPN
ajlm-1122	282	3	.	.	PUNCT
ajlm-1122	283	1	2011;12:70	2011;12:70	X
ajlm-1122	283	2	.	.	PUNCT
ajlm-1122	284	1	https://doi.org/10.1186/1471-2105-12-70	https://doi.org/10.1186/1471-2105-12-70	PROPN
ajlm-1122	284	2	oliveros	oliveros	PROPN
ajlm-1122	284	3	jc	jc	PROPN
ajlm-1122	284	4	.	.	PROPN
ajlm-1122	284	5	venny	venny	PROPN
ajlm-1122	284	6	.	.	PUNCT
ajlm-1122	285	1	an	an	DET
ajlm-1122	285	2	interactive	interactive	ADJ
ajlm-1122	285	3	tool	tool	NOUN
ajlm-1122	285	4	for	for	ADP
ajlm-1122	285	5	comparing	compare	VERB
ajlm-1122	285	6	lists	list	NOUN
ajlm-1122	285	7	with	with	ADP
ajlm-1122	285	8	venn	venn	PROPN
ajlm-1122	285	9	’s	’s	PART
ajlm-1122	285	10	diagrams	diagram	NOUN
ajlm-1122	285	11	.	.	PUNCT
ajlm-1122	286	1	2007–2015	2007–2015	NUM
ajlm-1122	287	1	[	[	X
ajlm-1122	287	2	homepage	homepage	NOUN
ajlm-1122	287	3	on	on	ADP
ajlm-1122	287	4	the	the	DET
ajlm-1122	287	5	internet	internet	NOUN
ajlm-1122	287	6	]	]	PUNCT
ajlm-1122	287	7	.	.	PUNCT
ajlm-1122	288	1	[	[	X
ajlm-1122	288	2	cited	cite	VERB
ajlm-1122	288	3	2020	2020	NUM
ajlm-1122	288	4	may	may	AUX
ajlm-1122	288	5	11	11	NUM
ajlm-1122	288	6	]	]	PUNCT
ajlm-1122	288	7	.	.	PUNCT
ajlm-1122	289	1	available	available	ADJ
ajlm-1122	289	2	from	from	ADP
ajlm-1122	289	3	:	:	PUNCT
ajlm-1122	289	4	http://bioinfogp.cnb.csic.es/tools/venny/index.html	http://bioinfogp.cnb.csic.es/tools/venny/index.html	PROPN
ajlm-1122	289	5	powell	powell	PROPN
ajlm-1122	289	6	dw	dw	PROPN
ajlm-1122	289	7	,	,	PUNCT
ajlm-1122	289	8	weaver	weaver	NOUN
ajlm-1122	289	9	cm	cm	PROPN
ajlm-1122	289	10	,	,	PUNCT
ajlm-1122	289	11	jennings	jennings	PROPN
ajlm-1122	289	12	jl	jl	PROPN
ajlm-1122	289	13	,	,	PUNCT
ajlm-1122	289	14	et	et	PROPN
ajlm-1122	289	15	al	al	PROPN
ajlm-1122	289	16	.	.	PUNCT
ajlm-1122	290	1	cluster	cluster	NOUN
ajlm-1122	290	2	analysis	analysis	NOUN
ajlm-1122	290	3	of	of	ADP
ajlm-1122	290	4	mass	mass	ADJ
ajlm-1122	290	5	spectrometry	spectrometry	NOUN
ajlm-1122	290	6	data	datum	NOUN
ajlm-1122	290	7	reveals	reveal	VERB
ajlm-1122	290	8	a	a	DET
ajlm-1122	290	9	novel	novel	ADJ
ajlm-1122	290	10	component	component	NOUN
ajlm-1122	290	11	of	of	ADP
ajlm-1122	290	12	saga	saga	NOUN
ajlm-1122	290	13	.	.	PUNCT
ajlm-1122	291	1	mol	mol	ADP
ajlm-1122	291	2	cell	cell	NOUN
ajlm-1122	291	3	biol	biol	NOUN
ajlm-1122	291	4	.	.	PUNCT
ajlm-1122	292	1	2004;24(16):7249–7259	2004;24(16):7249–7259	NUM
ajlm-1122	292	2	.	.	PUNCT
ajlm-1122	293	1	https://doi.org/10.1128/mcb.24.16.7249-7259.2004	https://doi.org/10.1128/mcb.24.16.7249-7259.2004	NOUN
ajlm-1122	293	2	vaudel	vaudel	PROPN
ajlm-1122	293	3	m.	m.	PROPN
ajlm-1122	293	4	ms2	ms2	PROPN
ajlm-1122	293	5	-	-	PUNCT
ajlm-1122	293	6	based	base	VERB
ajlm-1122	293	7	quantitation	quantitation	NOUN
ajlm-1122	293	8	.	.	PUNCT
ajlm-1122	294	1	in	in	ADP
ajlm-1122	294	2	:	:	PUNCT
ajlm-1122	294	3	bessant	bessant	PROPN
ajlm-1122	294	4	c	c	PROPN
ajlm-1122	294	5	,	,	PUNCT
ajlm-1122	294	6	editor	editor	NOUN
ajlm-1122	294	7	.	.	PUNCT
ajlm-1122	295	1	new	new	ADJ
ajlm-1122	295	2	developments	development	NOUN
ajlm-1122	295	3	in	in	ADP
ajlm-1122	295	4	mass	mass	ADJ
ajlm-1122	295	5	spectrometry	spectrometry	NOUN
ajlm-1122	295	6	no	no	NOUN
ajlm-1122	295	7	.	.	PROPN
ajlm-1122	296	1	5	5	NUM
ajlm-1122	296	2	:	:	PUNCT
ajlm-1122	296	3	proteome	proteome	PROPN
ajlm-1122	296	4	informatics	informatics	PROPN
ajlm-1122	296	5	.	.	PUNCT
ajlm-1122	297	1	cambridge	cambridge	PROPN
ajlm-1122	297	2	:	:	PUNCT
ajlm-1122	297	3	the	the	DET
ajlm-1122	297	4	royal	royal	ADJ
ajlm-1122	297	5	society	society	NOUN
ajlm-1122	297	6	of	of	ADP
ajlm-1122	297	7	chemistry	chemistry	NOUN
ajlm-1122	297	8	;	;	PUNCT
ajlm-1122	297	9	2017	2017	NUM
ajlm-1122	297	10	,	,	PUNCT
ajlm-1122	297	11	p.	p.	NOUN
ajlm-1122	297	12	155–177	155–177	NUM
ajlm-1122	297	13	.	.	PUNCT
ajlm-1122	298	1	wu	wu	PROPN
ajlm-1122	298	2	s	s	PROPN
ajlm-1122	298	3	,	,	PUNCT
ajlm-1122	298	4	zhu	zhu	PROPN
ajlm-1122	298	5	y.	y.	PROPN
ajlm-1122	298	6	propas	propas	PROPN
ajlm-1122	298	7	:	:	PUNCT
ajlm-1122	298	8	standalone	standalone	ADJ
ajlm-1122	298	9	software	software	NOUN
ajlm-1122	298	10	to	to	PART
ajlm-1122	298	11	analyze	analyze	VERB
ajlm-1122	298	12	protein	protein	NOUN
ajlm-1122	298	13	properties	property	NOUN
ajlm-1122	298	14	.	.	PUNCT
ajlm-1122	299	1	bioinformation	bioinformation	NOUN
ajlm-1122	299	2	.	.	PUNCT
ajlm-1122	300	1	2012;8(3):167–169	2012;8(3):167–169	X
ajlm-1122	300	2	.	.	X
ajlm-1122	300	3	https://doi.org/10.6026/97320630008167	https://doi.org/10.6026/97320630008167	PROPN
ajlm-1122	300	4	kyte	kyte	PROPN
ajlm-1122	300	5	j	j	PROPN
ajlm-1122	300	6	,	,	PUNCT
ajlm-1122	300	7	doolittle	doolittle	PROPN
ajlm-1122	300	8	rf	rf	PROPN
ajlm-1122	300	9	.	.	PUNCT
ajlm-1122	301	1	a	a	DET
ajlm-1122	301	2	simple	simple	ADJ
ajlm-1122	301	3	method	method	NOUN
ajlm-1122	301	4	for	for	ADP
ajlm-1122	301	5	displaying	display	VERB
ajlm-1122	301	6	the	the	DET
ajlm-1122	301	7	hydropathic	hydropathic	ADJ
ajlm-1122	301	8	character	character	NOUN
ajlm-1122	301	9	of	of	ADP
ajlm-1122	301	10	a	a	DET
ajlm-1122	301	11	protein	protein	NOUN
ajlm-1122	301	12	.	.	PUNCT
ajlm-1122	302	1	j	j	PROPN
ajlm-1122	302	2	mol	mol	PROPN
ajlm-1122	302	3	biol	biol	PROPN
ajlm-1122	302	4	.	.	PUNCT
ajlm-1122	303	1	1982;157(1):105–132	1982;157(1):105–132	NUM
ajlm-1122	303	2	.	.	PUNCT
ajlm-1122	303	3	https://doi.org/10.1016/0022-2836(82)90515-0	https://doi.org/10.1016/0022-2836(82)90515-0	PROPN
ajlm-1122	303	4	farias	farias	PROPN
ajlm-1122	303	5	ss	ss	PROPN
ajlm-1122	303	6	,	,	PUNCT
ajlm-1122	303	7	kline	kline	PROPN
ajlm-1122	303	8	kg	kg	PROPN
ajlm-1122	303	9	,	,	PUNCT
ajlm-1122	303	10	klepacki	klepacki	PROPN
ajlm-1122	303	11	j	j	PROPN
ajlm-1122	303	12	,	,	PUNCT
ajlm-1122	303	13	et	et	PROPN
ajlm-1122	303	14	al	al	PROPN
ajlm-1122	303	15	.	.	PROPN
ajlm-1122	304	1	quantitative	quantitative	ADJ
ajlm-1122	304	2	improvements	improvement	NOUN
ajlm-1122	304	3	in	in	ADP
ajlm-1122	304	4	peptide	peptide	ADJ
ajlm-1122	304	5	recovery	recovery	NOUN
ajlm-1122	304	6	at	at	ADP
ajlm-1122	304	7	elevated	elevated	ADJ
ajlm-1122	304	8	chromatographic	chromatographic	ADJ
ajlm-1122	304	9	temperatures	temperature	NOUN
ajlm-1122	304	10	from	from	ADP
ajlm-1122	304	11	μlc	μlc	NOUN
ajlm-1122	304	12	/	/	SYM
ajlm-1122	304	13	ms	ms	NOUN
ajlm-1122	304	14	analyses	analysis	NOUN
ajlm-1122	304	15	of	of	ADP
ajlm-1122	304	16	brain	brain	NOUN
ajlm-1122	304	17	using	use	VERB
ajlm-1122	304	18	srm	srm	PROPN
ajlm-1122	304	19	mass	mass	PROPN
ajlm-1122	304	20	spectrometry	spectrometry	NOUN
ajlm-1122	304	21	.	.	PUNCT
ajlm-1122	305	1	anal	anal	ADJ
ajlm-1122	305	2	chem	chem	NOUN
ajlm-1122	305	3	.	.	PUNCT
ajlm-1122	306	1	2010;82(9):3435–3440	2010;82(9):3435–3440	NUM
ajlm-1122	306	2	.	.	PUNCT
ajlm-1122	307	1	https://doi.org/10.1021/ac100359p	https://doi.org/10.1021/ac100359p	PROPN
ajlm-1122	307	2	sprung	spring	VERB
ajlm-1122	307	3	rw	rw	PROPN
ajlm-1122	307	4	,	,	PUNCT
ajlm-1122	307	5	brock	brock	PROPN
ajlm-1122	307	6	jwc	jwc	PROPN
ajlm-1122	307	7	,	,	PUNCT
ajlm-1122	307	8	tanksley	tanksley	NOUN
ajlm-1122	307	9	jp	jp	NOUN
ajlm-1122	307	10	,	,	PUNCT
ajlm-1122	307	11	et	et	PROPN
ajlm-1122	308	1	al	al	PROPN
ajlm-1122	308	2	.	.	PROPN
ajlm-1122	308	3	equivalence	equivalence	NOUN
ajlm-1122	308	4	of	of	ADP
ajlm-1122	308	5	protein	protein	NOUN
ajlm-1122	308	6	inventories	inventory	NOUN
ajlm-1122	308	7	obtained	obtain	VERB
ajlm-1122	308	8	from	from	ADP
ajlm-1122	308	9	formalin	formalin	NOUN
ajlm-1122	308	10	-	-	PUNCT
ajlm-1122	308	11	fixed	fix	VERB
ajlm-1122	308	12	paraffin	paraffin	NOUN
ajlm-1122	308	13	-	-	PUNCT
ajlm-1122	308	14	embedded	embed	VERB
ajlm-1122	308	15	and	and	CCONJ
ajlm-1122	308	16	frozen	frozen	ADJ
ajlm-1122	308	17	tissue	tissue	NOUN
ajlm-1122	308	18	in	in	ADP
ajlm-1122	308	19	multidimensional	multidimensional	ADJ
ajlm-1122	308	20	liquid	liquid	ADJ
ajlm-1122	308	21	chromatography	chromatography	NOUN
ajlm-1122	308	22	-	-	PUNCT
ajlm-1122	308	23	tandem	tandem	NOUN
ajlm-1122	308	24	mass	mass	ADJ
ajlm-1122	308	25	spectrometry	spectrometry	NOUN
ajlm-1122	308	26	shotgun	shotgun	NOUN
ajlm-1122	308	27	proteomic	proteomic	ADJ
ajlm-1122	308	28	analysis	analysis	NOUN
ajlm-1122	308	29	.	.	PUNCT
ajlm-1122	309	1	mol	mol	ADP
ajlm-1122	309	2	cell	cell	NOUN
ajlm-1122	309	3	proteomics	proteomic	NOUN
ajlm-1122	309	4	.	.	PUNCT
ajlm-1122	310	1	2009;8:1988–1998	2009;8:1988–1998	NUM
ajlm-1122	310	2	.	.	PUNCT
ajlm-1122	311	1	https://doi.org/10.1074/mcp.m800518-mcp200	https://doi.org/10.1074/mcp.m800518-mcp200	PROPN
ajlm-1122	311	2	craven	craven	PROPN
ajlm-1122	311	3	ra	ra	PROPN
ajlm-1122	311	4	,	,	PUNCT
ajlm-1122	311	5	cairns	cairns	PROPN
ajlm-1122	311	6	da	da	PROPN
ajlm-1122	311	7	,	,	PUNCT
ajlm-1122	311	8	zougman	zougman	NOUN
ajlm-1122	311	9	a	a	X
ajlm-1122	311	10	,	,	PUNCT
ajlm-1122	311	11	et	et	PROPN
ajlm-1122	311	12	al	al	PROPN
ajlm-1122	311	13	.	.	PROPN
ajlm-1122	312	1	proteomic	proteomic	ADJ
ajlm-1122	312	2	analysis	analysis	NOUN
ajlm-1122	312	3	of	of	ADP
ajlm-1122	312	4	formalin	formalin	NOUN
ajlm-1122	312	5	-	-	PUNCT
ajlm-1122	312	6	fixed	fix	VERB
ajlm-1122	312	7	paraffin	paraffin	NOUN
ajlm-1122	312	8	-	-	PUNCT
ajlm-1122	312	9	embedded	embed	VERB
ajlm-1122	312	10	renal	renal	ADJ
ajlm-1122	312	11	tissue	tissue	NOUN
ajlm-1122	312	12	samples	sample	NOUN
ajlm-1122	312	13	by	by	ADP
ajlm-1122	312	14	label	label	NOUN
ajlm-1122	312	15	-	-	PUNCT
ajlm-1122	312	16	free	free	ADJ
ajlm-1122	312	17	ms	ms	NOUN
ajlm-1122	312	18	:	:	PUNCT
ajlm-1122	312	19	assessment	assessment	NOUN
ajlm-1122	312	20	of	of	ADP
ajlm-1122	312	21	overall	overall	ADJ
ajlm-1122	312	22	technical	technical	ADJ
ajlm-1122	312	23	variability	variability	NOUN
ajlm-1122	312	24	and	and	CCONJ
ajlm-1122	312	25	the	the	DET
ajlm-1122	312	26	impact	impact	NOUN
ajlm-1122	312	27	of	of	ADP
ajlm-1122	312	28	block	block	NOUN
ajlm-1122	312	29	age	age	NOUN
ajlm-1122	312	30	.	.	PUNCT
ajlm-1122	313	1	proteomics	proteomic	NOUN
ajlm-1122	313	2	clin	clin	PROPN
ajlm-1122	313	3	appl	appl	PROPN
ajlm-1122	313	4	.	.	PUNCT
ajlm-1122	314	1	2013;7(3–4):273–282	2013;7(3–4):273–282	NUM
ajlm-1122	314	2	.	.	PUNCT
ajlm-1122	315	1	https://doi.org/10.1002/prca.201200065	https://doi.org/10.1002/prca.201200065	PROPN
ajlm-1122	315	2	wiśniewski	wiśniewski	PROPN
ajlm-1122	315	3	jr	jr	PROPN
ajlm-1122	315	4	,	,	PUNCT
ajlm-1122	315	5	zougman	zougman	PROPN
ajlm-1122	315	6	a	a	X
ajlm-1122	315	7	,	,	PUNCT
ajlm-1122	315	8	nagaraj	nagaraj	PROPN
ajlm-1122	315	9	n	n	CCONJ
ajlm-1122	315	10	,	,	PUNCT
ajlm-1122	315	11	et	et	PROPN
ajlm-1122	315	12	al	al	PROPN
ajlm-1122	315	13	.	.	PUNCT
ajlm-1122	316	1	universal	universal	ADJ
ajlm-1122	316	2	sample	sample	NOUN
ajlm-1122	316	3	preparation	preparation	NOUN
ajlm-1122	316	4	method	method	NOUN
ajlm-1122	316	5	for	for	ADP
ajlm-1122	316	6	proteome	proteome	ADJ
ajlm-1122	316	7	analysis	analysis	NOUN
ajlm-1122	316	8	.	.	PUNCT
ajlm-1122	317	1	nat	nat	NOUN
ajlm-1122	317	2	methods	method	NOUN
ajlm-1122	317	3	.	.	PUNCT
ajlm-1122	318	1	2009;6(5):359–362	2009;6(5):359–362	NUM
ajlm-1122	318	2	.	.	PUNCT
ajlm-1122	319	1	https://doi.org/10.1038/nmeth.1322	https://doi.org/10.1038/nmeth.1322	PROPN
ajlm-1122	319	2	nel	nel	PROPN
ajlm-1122	319	3	ajm	ajm	PROPN
ajlm-1122	319	4	,	,	PUNCT
ajlm-1122	319	5	garnett	garnett	PROPN
ajlm-1122	319	6	s	s	PROPN
ajlm-1122	319	7	,	,	PUNCT
ajlm-1122	319	8	blackburn	blackburn	PROPN
ajlm-1122	319	9	jm	jm	PROPN
ajlm-1122	319	10	,	,	PUNCT
ajlm-1122	319	11	et	et	PROPN
ajlm-1122	319	12	al	al	PROPN
ajlm-1122	319	13	.	.	PROPN
ajlm-1122	319	14	comparative	comparative	ADJ
ajlm-1122	319	15	re	re	NOUN
ajlm-1122	319	16	-	-	NOUN
ajlm-1122	319	17	evaluation	evaluation	NOUN
ajlm-1122	319	18	of	of	ADP
ajlm-1122	319	19	fasp	fasp	NOUN
ajlm-1122	319	20	and	and	CCONJ
ajlm-1122	319	21	enhanced	enhance	VERB
ajlm-1122	319	22	fasp	fasp	NOUN
ajlm-1122	319	23	methods	method	NOUN
ajlm-1122	319	24	by	by	ADP
ajlm-1122	319	25	lc	lc	PROPN
ajlm-1122	319	26	-	-	PUNCT
ajlm-1122	319	27	ms	ms	PROPN
ajlm-1122	319	28	/	/	SYM
ajlm-1122	319	29	ms	ms	PROPN
ajlm-1122	319	30	.	.	PROPN
ajlm-1122	319	31	j	j	PROPN
ajlm-1122	319	32	proteome	proteome	PROPN
ajlm-1122	319	33	res	re	NOUN
ajlm-1122	319	34	.	.	PUNCT
ajlm-1122	320	1	2015;14(3):1637–1642	2015;14(3):1637–1642	PROPN
ajlm-1122	320	2	.	.	PUNCT
ajlm-1122	321	1	https://doi.org/10.1021/pr501266c	https://doi.org/10.1021/pr501266c	PROPN
ajlm-1122	321	2	scopes	scope	VERB
ajlm-1122	321	3	rk	rk	VERB
ajlm-1122	321	4	.	.	PUNCT
ajlm-1122	322	1	making	make	VERB
ajlm-1122	322	2	an	an	DET
ajlm-1122	322	3	extract	extract	NOUN
ajlm-1122	322	4	.	.	PUNCT
ajlm-1122	323	1	in	in	ADP
ajlm-1122	323	2	:	:	PUNCT
ajlm-1122	323	3	cantor	cantor	PROPN
ajlm-1122	323	4	c	c	PROPN
ajlm-1122	323	5	,	,	PUNCT
ajlm-1122	323	6	editor	editor	NOUN
ajlm-1122	323	7	.	.	PUNCT
ajlm-1122	324	1	protein	protein	NOUN
ajlm-1122	324	2	purification	purification	NOUN
ajlm-1122	324	3	:	:	PUNCT
ajlm-1122	324	4	principles	principle	NOUN
ajlm-1122	324	5	and	and	CCONJ
ajlm-1122	324	6	practice	practice	NOUN
ajlm-1122	324	7	.	.	PUNCT
ajlm-1122	325	1	3rd	3rd	ADJ
ajlm-1122	325	2	ed	ed	NOUN
ajlm-1122	325	3	.	.	PUNCT
ajlm-1122	326	1	new	new	PROPN
ajlm-1122	326	2	york	york	PROPN
ajlm-1122	326	3	,	,	PUNCT
ajlm-1122	326	4	ny	ny	PROPN
ajlm-1122	326	5	:	:	PUNCT
ajlm-1122	326	6	springer	springer	NOUN
ajlm-1122	326	7	;	;	PUNCT
ajlm-1122	326	8	1994	1994	NUM
ajlm-1122	326	9	,	,	PUNCT
ajlm-1122	326	10	p.	p.	NOUN
ajlm-1122	326	11	22–43	22–43	NUM
ajlm-1122	326	12	.	.	PUNCT
ajlm-1122	327	1	fu	fu	PROPN
ajlm-1122	327	2	z	z	PROPN
ajlm-1122	327	3	,	,	PUNCT
ajlm-1122	327	4	yan	yan	PROPN
ajlm-1122	327	5	k	k	PROPN
ajlm-1122	327	6	,	,	PUNCT
ajlm-1122	327	7	rosenberg	rosenberg	PROPN
ajlm-1122	327	8	a	a	PROPN
ajlm-1122	327	9	,	,	PUNCT
ajlm-1122	327	10	et	et	PROPN
ajlm-1122	327	11	al	al	PROPN
ajlm-1122	327	12	.	.	PROPN
ajlm-1122	327	13	improved	improve	VERB
ajlm-1122	327	14	protein	protein	NOUN
ajlm-1122	327	15	extraction	extraction	NOUN
ajlm-1122	327	16	and	and	CCONJ
ajlm-1122	327	17	protein	protein	NOUN
ajlm-1122	327	18	identification	identification	NOUN
ajlm-1122	327	19	from	from	ADP
ajlm-1122	327	20	archival	archival	NOUN
ajlm-1122	327	21	formalin	formalin	NOUN
ajlm-1122	327	22	-	-	PUNCT
ajlm-1122	327	23	fixed	fix	VERB
ajlm-1122	327	24	paraffin	paraffin	NOUN
ajlm-1122	327	25	-	-	PUNCT
ajlm-1122	327	26	embedded	embed	VERB
ajlm-1122	327	27	human	human	ADJ
ajlm-1122	327	28	aortas	aorta	NOUN
ajlm-1122	327	29	.	.	PUNCT
ajlm-1122	328	1	proteomics	proteomic	NOUN
ajlm-1122	328	2	clin	clin	PROPN
ajlm-1122	328	3	appl	appl	PROPN
ajlm-1122	329	1	.	.	PUNCT
ajlm-1122	330	1	2013;7(3–4):217–224	2013;7(3–4):217–224	NUM
ajlm-1122	330	2	.	.	PUNCT
ajlm-1122	330	3	https://doi.org/10.1002/prca.201200064	https://doi.org/10.1002/prca.201200064	PROPN
ajlm-1122	330	4	hustoft	hustoft	PROPN
ajlm-1122	330	5	hk	hk	PROPN
ajlm-1122	330	6	,	,	PUNCT
ajlm-1122	330	7	malerod	malerod	PROPN
ajlm-1122	330	8	h	h	PROPN
ajlm-1122	330	9	,	,	PUNCT
ajlm-1122	330	10	wilson	wilson	PROPN
ajlm-1122	330	11	sr	sr	PROPN
ajlm-1122	330	12	,	,	PUNCT
ajlm-1122	330	13	et	et	PROPN
ajlm-1122	330	14	al	al	PROPN
ajlm-1122	330	15	.	.	PUNCT
ajlm-1122	331	1	a	a	DET
ajlm-1122	331	2	critical	critical	ADJ
ajlm-1122	331	3	review	review	NOUN
ajlm-1122	331	4	of	of	ADP
ajlm-1122	331	5	trypsin	trypsin	NOUN
ajlm-1122	331	6	digestion	digestion	NOUN
ajlm-1122	331	7	for	for	ADP
ajlm-1122	331	8	lc	lc	PROPN
ajlm-1122	331	9	-	-	PUNCT
ajlm-1122	331	10	ms	ms	NOUN
ajlm-1122	331	11	based	base	VERB
ajlm-1122	331	12	proteomics	proteomic	NOUN
ajlm-1122	331	13	.	.	PUNCT
ajlm-1122	332	1	in	in	ADP
ajlm-1122	332	2	:	:	PUNCT
ajlm-1122	332	3	leung	leung	PROPN
ajlm-1122	332	4	h	h	PROPN
ajlm-1122	332	5	-	-	PUNCT
ajlm-1122	332	6	c	c	PROPN
ajlm-1122	332	7	,	,	PUNCT
ajlm-1122	332	8	editor	editor	NOUN
ajlm-1122	332	9	.	.	PUNCT
ajlm-1122	333	1	integrative	integrative	ADJ
ajlm-1122	333	2	proteomics	proteomic	NOUN
ajlm-1122	333	3	.	.	PUNCT
ajlm-1122	334	1	croatia	croatia	PROPN
ajlm-1122	334	2	:	:	PUNCT
ajlm-1122	334	3	intech	intech	PROPN
ajlm-1122	334	4	;	;	PUNCT
ajlm-1122	334	5	2012	2012	NUM
ajlm-1122	334	6	,	,	PUNCT
ajlm-1122	334	7	p.	p.	NOUN
ajlm-1122	334	8	73–92	73–92	NUM
ajlm-1122	334	9	.	.	PUNCT
ajlm-1122	335	1	moggridge	moggridge	PROPN
ajlm-1122	335	2	s	s	PROPN
ajlm-1122	335	3	,	,	PUNCT
ajlm-1122	335	4	sorensen	sorensen	PROPN
ajlm-1122	335	5	ph	ph	PROPN
ajlm-1122	335	6	,	,	PUNCT
ajlm-1122	335	7	morin	morin	NOUN
ajlm-1122	335	8	gb	gb	PROPN
ajlm-1122	335	9	,	,	PUNCT
ajlm-1122	335	10	et	et	PROPN
ajlm-1122	335	11	al	al	PROPN
ajlm-1122	335	12	.	.	PUNCT
ajlm-1122	336	1	extending	extend	VERB
ajlm-1122	336	2	the	the	DET
ajlm-1122	336	3	compatibility	compatibility	NOUN
ajlm-1122	336	4	of	of	ADP
ajlm-1122	336	5	the	the	DET
ajlm-1122	336	6	sp3	sp3	ADJ
ajlm-1122	336	7	paramagnetic	paramagnetic	ADJ
ajlm-1122	336	8	bead	bead	NOUN
ajlm-1122	336	9	processing	processing	NOUN
ajlm-1122	336	10	approach	approach	NOUN
ajlm-1122	336	11	for	for	ADP
ajlm-1122	336	12	proteomics	proteomic	NOUN
ajlm-1122	336	13	.	.	PUNCT
ajlm-1122	337	1	j	j	PROPN
ajlm-1122	337	2	proteome	proteome	PROPN
ajlm-1122	337	3	res	re	NOUN
ajlm-1122	337	4	.	.	PUNCT
ajlm-1122	338	1	2018;17(4):1730–1740	2018;17(4):1730–1740	NUM
ajlm-1122	338	2	.	.	PUNCT
ajlm-1122	339	1	https://doi.org/10.1021/acs.jproteome.7b00913	https://doi.org/10.1021/acs.jproteome.7b00913	PROPN
ajlm-1122	339	2	batth	batth	NOUN
ajlm-1122	339	3	ts	ts	NOUN
ajlm-1122	339	4	,	,	PUNCT
ajlm-1122	339	5	tollenaere	tollenaere	NUM
ajlm-1122	339	6	max	max	PROPN
ajlm-1122	339	7	,	,	PUNCT
ajlm-1122	339	8	rüther	rüther	PROPN
ajlm-1122	339	9	pl	pl	PROPN
ajlm-1122	339	10	,	,	PUNCT
ajlm-1122	339	11	et	et	PROPN
ajlm-1122	339	12	al	al	PROPN
ajlm-1122	339	13	.	.	PUNCT
ajlm-1122	339	14	protein	protein	NOUN
ajlm-1122	339	15	aggregation	aggregation	NOUN
ajlm-1122	339	16	capture	capture	NOUN
ajlm-1122	339	17	on	on	ADP
ajlm-1122	339	18	microparticles	microparticle	NOUN
ajlm-1122	339	19	enables	enable	VERB
ajlm-1122	339	20	multi	multi	ADJ
ajlm-1122	339	21	-	-	ADJ
ajlm-1122	339	22	purpose	purpose	NOUN
ajlm-1122	339	23	proteomics	proteomic	NOUN
ajlm-1122	339	24	sample	sample	NOUN
ajlm-1122	339	25	preparation	preparation	NOUN
ajlm-1122	339	26	.	.	PUNCT
ajlm-1122	340	1	mol	mol	ADP
ajlm-1122	340	2	cell	cell	NOUN
ajlm-1122	340	3	proteomics	proteomic	NOUN
ajlm-1122	340	4	[	[	X
ajlm-1122	340	5	serial	serial	ADJ
ajlm-1122	340	6	online	online	NOUN
ajlm-1122	340	7	]	]	PUNCT
ajlm-1122	340	8	.	.	PUNCT
ajlm-1122	340	9	2018	2018	NUM
ajlm-1122	341	1	[	[	X
ajlm-1122	341	2	cited	cite	VERB
ajlm-1122	341	3	2020	2020	NUM
ajlm-1122	341	4	may	may	AUX
ajlm-1122	341	5	11	11	NUM
ajlm-1122	341	6	]	]	PUNCT
ajlm-1122	341	7	.	.	PUNCT
ajlm-1122	342	1	available	available	ADJ
ajlm-1122	342	2	from	from	ADP
ajlm-1122	342	3	:	:	PUNCT
ajlm-1122	342	4	https://www.biorxiv.org/content/early/2018/10/25/447904	https://www.biorxiv.org/content/early/2018/10/25/447904	PROPN
ajlm-1122	342	5	hughes	hughes	PROPN
ajlm-1122	342	6	cs	cs	PROPN
ajlm-1122	342	7	,	,	PUNCT
ajlm-1122	342	8	moggridge	moggridge	VERB
ajlm-1122	342	9	s	s	PROPN
ajlm-1122	342	10	,	,	PUNCT
ajlm-1122	342	11	müller	müller	PROPN
ajlm-1122	342	12	t	t	PROPN
ajlm-1122	342	13	,	,	PUNCT
ajlm-1122	342	14	et	et	PROPN
ajlm-1122	342	15	al	al	PROPN
ajlm-1122	342	16	.	.	PUNCT
ajlm-1122	342	17	single	single	ADJ
ajlm-1122	342	18	-	-	PUNCT
ajlm-1122	342	19	pot	pot	NOUN
ajlm-1122	342	20	,	,	PUNCT
ajlm-1122	342	21	solid	solid	ADJ
ajlm-1122	342	22	-	-	PUNCT
ajlm-1122	342	23	phase	phase	NOUN
ajlm-1122	342	24	-	-	PUNCT
ajlm-1122	342	25	enhanced	enhance	VERB
ajlm-1122	342	26	sample	sample	NOUN
ajlm-1122	342	27	preparation	preparation	NOUN
ajlm-1122	342	28	for	for	ADP
ajlm-1122	342	29	proteomics	proteomic	NOUN
ajlm-1122	342	30	experiments	experiment	NOUN
ajlm-1122	342	31	.	.	PUNCT
ajlm-1122	343	1	nat	nat	NOUN
ajlm-1122	343	2	protoc	protoc	VERB
ajlm-1122	343	3	.	.	PUNCT
ajlm-1122	344	1	2018;14(1):1–18	2018;14(1):1–18	X
ajlm-1122	344	2	.	.	PUNCT
ajlm-1122	345	1	https://doi.org/10.1038/s41596-018-0082-x	https://doi.org/10.1038/s41596-018-0082-x	PROPN