id	sid	tid	token	lemma	pos
ajlm-41	1	1	article	article	PROPN
ajlm-41	1	2	information	information	NOUN
ajlm-41	1	3	authors	author	NOUN
ajlm-41	1	4	:	:	PUNCT
ajlm-41	1	5	racheal	racheal	PROPN
ajlm-41	1	6	w.	w.	PROPN
ajlm-41	1	7	kimani1	kimani1	PROPN
ajlm-41	2	1	anne	anne	PROPN
ajlm-41	2	2	w.t	w.t	PROPN
ajlm-41	2	3	.	.	PUNCT
ajlm-41	3	1	muigai2	muigai2	PROPN
ajlm-41	3	2	willie	willie	PROPN
ajlm-41	3	3	sang3	sang3	PROPN
ajlm-41	4	1	john	john	PROPN
ajlm-41	4	2	n.	n.	PROPN
ajlm-41	4	3	kiiru3	kiiru3	PROPN
ajlm-41	4	4	samuel	samuel	PROPN
ajlm-41	4	5	kariuki3	kariuki3	PROPN
ajlm-41	4	6	affiliations	affiliation	NOUN
ajlm-41	4	7	:	:	PUNCT
ajlm-41	4	8	1institute	1institute	NUM
ajlm-41	4	9	of	of	ADP
ajlm-41	4	10	tropical	tropical	ADJ
ajlm-41	4	11	medicine	medicine	NOUN
ajlm-41	4	12	and	and	CCONJ
ajlm-41	4	13	infectious	infectious	ADJ
ajlm-41	4	14	disease	disease	NOUN
ajlm-41	4	15	,	,	PUNCT
ajlm-41	4	16	jomo	jomo	PROPN
ajlm-41	4	17	kenyatta	kenyatta	PROPN
ajlm-41	4	18	university	university	PROPN
ajlm-41	4	19	of	of	ADP
ajlm-41	4	20	agriculture	agriculture	NOUN
ajlm-41	4	21	and	and	CCONJ
ajlm-41	4	22	technology	technology	NOUN
ajlm-41	4	23	,	,	PUNCT
ajlm-41	4	24	kenya	kenya	PROPN
ajlm-41	4	25	2faculty	2faculty	NUM
ajlm-41	4	26	of	of	ADP
ajlm-41	4	27	science	science	NOUN
ajlm-41	4	28	,	,	PUNCT
ajlm-41	4	29	jomo	jomo	PROPN
ajlm-41	4	30	kenyatta	kenyatta	PROPN
ajlm-41	4	31	university	university	PROPN
ajlm-41	4	32	of	of	ADP
ajlm-41	4	33	agriculture	agriculture	NOUN
ajlm-41	4	34	and	and	CCONJ
ajlm-41	4	35	technology	technology	NOUN
ajlm-41	4	36	,	,	PUNCT
ajlm-41	4	37	kenya	kenya	PROPN
ajlm-41	4	38	3centre	3centre	NUM
ajlm-41	4	39	for	for	ADP
ajlm-41	4	40	microbiology	microbiology	NOUN
ajlm-41	4	41	research	research	NOUN
ajlm-41	4	42	,	,	PUNCT
ajlm-41	4	43	kenya	kenya	PROPN
ajlm-41	4	44	medical	medical	PROPN
ajlm-41	4	45	research	research	PROPN
ajlm-41	4	46	institute	institute	PROPN
ajlm-41	4	47	,	,	PUNCT
ajlm-41	4	48	kenya	kenya	PROPN
ajlm-41	4	49	correspondence	correspondence	NOUN
ajlm-41	4	50	to	to	PART
ajlm-41	4	51	:	:	PUNCT
ajlm-41	4	52	racheal	racheal	PROPN
ajlm-41	4	53	kimani	kimani	PROPN
ajlm-41	4	54	postal	postal	PROPN
ajlm-41	4	55	address	address	PROPN
ajlm-41	4	56	:	:	PUNCT
ajlm-41	4	57	po	po	PROPN
ajlm-41	4	58	box	box	PROPN
ajlm-41	4	59	6056	6056	PROPN
ajlm-41	4	60	-	-	SYM
ajlm-41	4	61	00200	00200	NUM
ajlm-41	4	62	,	,	PUNCT
ajlm-41	4	63	thika	thika	X
ajlm-41	4	64	,	,	PUNCT
ajlm-41	4	65	kenya	kenya	PROPN
ajlm-41	4	66	dates	date	NOUN
ajlm-41	4	67	:	:	PUNCT
ajlm-41	4	68	received	receive	VERB
ajlm-41	4	69	:	:	PUNCT
ajlm-41	4	70	26	26	NUM
ajlm-41	4	71	apr	apr	NOUN
ajlm-41	4	72	.	.	PUNCT
ajlm-41	4	73	2012	2012	NUM
ajlm-41	4	74	accepted	accept	VERB
ajlm-41	4	75	:	:	PUNCT
ajlm-41	4	76	09	09	NUM
ajlm-41	4	77	apr	apr	NOUN
ajlm-41	4	78	.	.	PROPN
ajlm-41	5	1	2013	2013	NUM
ajlm-41	5	2	published	publish	VERB
ajlm-41	5	3	:	:	PUNCT
ajlm-41	5	4	17	17	NUM
ajlm-41	5	5	oct	oct	PROPN
ajlm-41	5	6	.	.	PROPN
ajlm-41	5	7	2014	2014	NUM
ajlm-41	6	1	how	how	SCONJ
ajlm-41	6	2	to	to	PART
ajlm-41	6	3	cite	cite	VERB
ajlm-41	6	4	this	this	DET
ajlm-41	6	5	article	article	NOUN
ajlm-41	6	6	:	:	PUNCT
ajlm-41	6	7	kimani	kimani	PROPN
ajlm-41	6	8	rw	rw	PROPN
ajlm-41	6	9	,	,	PUNCT
ajlm-41	6	10	muigai	muigai	PROPN
ajlm-41	6	11	awt	awt	PROPN
ajlm-41	6	12	,	,	PUNCT
ajlm-41	6	13	sang	sing	VERB
ajlm-41	6	14	w	w	PROPN
ajlm-41	6	15	,	,	PUNCT
ajlm-41	6	16	kiiru	kiiru	PROPN
ajlm-41	6	17	jn	jn	PROPN
ajlm-41	6	18	,	,	PUNCT
ajlm-41	6	19	kariuki	kariuki	PROPN
ajlm-41	6	20	s.	s.	PROPN
ajlm-41	6	21	virulence	virulence	NOUN
ajlm-41	6	22	factors	factor	NOUN
ajlm-41	6	23	in	in	ADP
ajlm-41	6	24	environmental	environmental	ADJ
ajlm-41	6	25	and	and	CCONJ
ajlm-41	6	26	clinical	clinical	ADJ
ajlm-41	6	27	vibrio	vibrio	ADJ
ajlm-41	6	28	cholerae	cholerae	NOUN
ajlm-41	6	29	from	from	ADP
ajlm-41	6	30	endemic	endemic	ADJ
ajlm-41	6	31	areas	area	NOUN
ajlm-41	6	32	in	in	ADP
ajlm-41	6	33	kenya	kenya	PROPN
ajlm-41	6	34	.	.	PUNCT
ajlm-41	7	1	afr	afr	PROPN
ajlm-41	7	2	j	j	PROPN
ajlm-41	7	3	lab	lab	PROPN
ajlm-41	7	4	med	med	PROPN
ajlm-41	7	5	.	.	PUNCT
ajlm-41	7	6	2014;3(1	2014;3(1	NUM
ajlm-41	7	7	)	)	PUNCT
ajlm-41	7	8	,	,	PUNCT
ajlm-41	7	9	art	art	NOUN
ajlm-41	7	10	.	.	PUNCT
ajlm-41	8	1	#	#	SYM
ajlm-41	8	2	41	41	NUM
ajlm-41	8	3	,	,	PUNCT
ajlm-41	8	4	7	7	NUM
ajlm-41	8	5	pages	page	NOUN
ajlm-41	8	6	.	.	PUNCT
ajlm-41	9	1	http://dx.doi.org/10.4102/	http://dx.doi.org/10.4102/	NUM
ajlm-41	9	2	ajlm.v3i1.41	ajlm.v3i1.41	NOUN
ajlm-41	9	3	copyright	copyright	NOUN
ajlm-41	9	4	notice	notice	NOUN
ajlm-41	9	5	:	:	PUNCT
ajlm-41	10	1	©	©	PROPN
ajlm-41	10	2	2014	2014	NUM
ajlm-41	10	3	.	.	PUNCT
ajlm-41	11	1	the	the	DET
ajlm-41	11	2	authors	author	NOUN
ajlm-41	11	3	.	.	PUNCT
ajlm-41	12	1	licensee	licensee	NOUN
ajlm-41	12	2	:	:	PUNCT
ajlm-41	12	3	aosis	aosis	NOUN
ajlm-41	12	4	openjournals	openjournal	NOUN
ajlm-41	12	5	.	.	PUNCT
ajlm-41	13	1	this	this	PRON
ajlm-41	13	2	is	be	AUX
ajlm-41	13	3	an	an	DET
ajlm-41	13	4	open	open	ADJ
ajlm-41	13	5	access	access	NOUN
ajlm-41	13	6	article	article	NOUN
ajlm-41	13	7	distributed	distribute	VERB
ajlm-41	13	8	under	under	ADP
ajlm-41	13	9	the	the	DET
ajlm-41	13	10	terms	term	NOUN
ajlm-41	13	11	of	of	ADP
ajlm-41	13	12	the	the	DET
ajlm-41	13	13	creative	creative	ADJ
ajlm-41	13	14	commons	common	NOUN
ajlm-41	13	15	attribution	attribution	NOUN
ajlm-41	13	16	license	license	NOUN
ajlm-41	13	17	,	,	PUNCT
ajlm-41	13	18	which	which	PRON
ajlm-41	13	19	permits	permit	VERB
ajlm-41	13	20	unrestricted	unrestricted	ADJ
ajlm-41	13	21	use	use	NOUN
ajlm-41	13	22	,	,	PUNCT
ajlm-41	13	23	distribution	distribution	NOUN
ajlm-41	13	24	,	,	PUNCT
ajlm-41	13	25	and	and	CCONJ
ajlm-41	13	26	reproduction	reproduction	NOUN
ajlm-41	13	27	in	in	ADP
ajlm-41	13	28	any	any	DET
ajlm-41	13	29	medium	medium	NOUN
ajlm-41	13	30	,	,	PUNCT
ajlm-41	13	31	provided	provide	VERB
ajlm-41	13	32	the	the	DET
ajlm-41	13	33	original	original	ADJ
ajlm-41	13	34	work	work	NOUN
ajlm-41	13	35	is	be	AUX
ajlm-41	13	36	properly	properly	ADV
ajlm-41	13	37	cited	cite	VERB
ajlm-41	13	38	.	.	PUNCT
ajlm-41	14	1	virulence	virulence	NOUN
ajlm-41	14	2	factors	factor	NOUN
ajlm-41	14	3	in	in	ADP
ajlm-41	14	4	environmental	environmental	ADJ
ajlm-41	14	5	and	and	CCONJ
ajlm-41	14	6	clinical	clinical	ADJ
ajlm-41	14	7	vibrio	vibrio	ADJ
ajlm-41	14	8	cholerae	cholerae	NOUN
ajlm-41	14	9	from	from	ADP
ajlm-41	14	10	endemic	endemic	ADJ
ajlm-41	14	11	areas	area	NOUN
ajlm-41	14	12	in	in	ADP
ajlm-41	14	13	kenya	kenya	PROPN
ajlm-41	14	14	in	in	ADP
ajlm-41	14	15	this	this	DET
ajlm-41	14	16	original	original	ADJ
ajlm-41	14	17	research	research	NOUN
ajlm-41	14	18	...	...	PUNCT
ajlm-41	14	19	open	open	ADJ
ajlm-41	14	20	access	access	NOUN
ajlm-41	14	21	•	•	ADP
ajlm-41	14	22	abstract	abstract	ADJ
ajlm-41	14	23	•	•	NUM
ajlm-41	14	24	introduction	introduction	NOUN
ajlm-41	14	25	•	•	NUM
ajlm-41	14	26	research	research	NOUN
ajlm-41	14	27	method	method	NOUN
ajlm-41	14	28	and	and	CCONJ
ajlm-41	14	29	design	design	NOUN
ajlm-41	14	30	   	   	SPACE
ajlm-41	14	31	•	•	NUM
ajlm-41	14	32	detection	detection	NOUN
ajlm-41	14	33	of	of	ADP
ajlm-41	14	34	virulence	virulence	NOUN
ajlm-41	14	35	factors	factor	NOUN
ajlm-41	14	36	from	from	ADP
ajlm-41	14	37	environmental	environmental	ADJ
ajlm-41	14	38	and	and	CCONJ
ajlm-41	14	39	clinical	clinical	ADJ
ajlm-41	14	40	v.	v.	ADP
ajlm-41	14	41	cholerae	cholerae	PROPN
ajlm-41	14	42	   	   	SPACE
ajlm-41	14	43	•	•	NOUN
ajlm-41	14	44	amplification	amplification	NOUN
ajlm-41	14	45	•	•	NOUN
ajlm-41	14	46	results	result	NOUN
ajlm-41	14	47	   	   	SPACE
ajlm-41	14	48	•	•	NUM
ajlm-41	14	49	isolation	isolation	NOUN
ajlm-41	14	50	of	of	ADP
ajlm-41	14	51	v.	v.	ADP
ajlm-41	14	52	cholerae	cholerae	PROPN
ajlm-41	14	53	from	from	ADP
ajlm-41	14	54	environmental	environmental	ADJ
ajlm-41	14	55	sources	source	NOUN
ajlm-41	14	56	   	   	SPACE
ajlm-41	14	57	•	•	NUM
ajlm-41	14	58	detection	detection	NOUN
ajlm-41	14	59	of	of	ADP
ajlm-41	14	60	virulence	virulence	NOUN
ajlm-41	14	61	genes	gene	NOUN
ajlm-41	14	62	from	from	ADP
ajlm-41	14	63	environmental	environmental	ADJ
ajlm-41	14	64	and	and	CCONJ
ajlm-41	14	65	clinical	clinical	ADJ
ajlm-41	14	66	v.	v.	ADP
ajlm-41	14	67	cholerae	cholerae	PROPN
ajlm-41	14	68	isolates	isolate	NOUN
ajlm-41	14	69	•	•	ADP
ajlm-41	14	70	ethical	ethical	ADJ
ajlm-41	14	71	considerations	consideration	NOUN
ajlm-41	14	72	   	   	SPACE
ajlm-41	14	73	•	•	NUM
ajlm-41	14	74	potential	potential	ADJ
ajlm-41	14	75	benefits	benefit	NOUN
ajlm-41	14	76	and	and	CCONJ
ajlm-41	14	77	hazards	hazard	NOUN
ajlm-41	14	78	•	•	PRON
ajlm-41	14	79	trustworthiness	trustworthiness	NOUN
ajlm-41	14	80	   	   	SPACE
ajlm-41	14	81	•	•	NUM
ajlm-41	14	82	reliability	reliability	NOUN
ajlm-41	14	83	   	   	SPACE
ajlm-41	14	84	•	•	NUM
ajlm-41	14	85	validity	validity	NOUN
ajlm-41	14	86	•	•	NOUN
ajlm-41	14	87	discussion	discussion	NOUN
ajlm-41	14	88	   	   	SPACE
ajlm-41	14	89	•	•	NOUN
ajlm-41	14	90	isolation	isolation	NOUN
ajlm-41	14	91	of	of	ADP
ajlm-41	14	92	environmental	environmental	ADJ
ajlm-41	14	93	v.	v.	ADP
ajlm-41	14	94	cholerae	cholerae	PROPN
ajlm-41	14	95	from	from	ADP
ajlm-41	14	96	western	western	ADJ
ajlm-41	14	97	and	and	CCONJ
ajlm-41	14	98	coastal	coastal	ADJ
ajlm-41	14	99	regions	region	NOUN
ajlm-41	14	100	of	of	ADP
ajlm-41	14	101	kenya	kenya	PROPN
ajlm-41	14	102	   	   	SPACE
ajlm-41	14	103	•	•	NUM
ajlm-41	14	104	prevalence	prevalence	NOUN
ajlm-41	14	105	of	of	ADP
ajlm-41	14	106	virulence	virulence	NOUN
ajlm-41	14	107	factors	factor	NOUN
ajlm-41	14	108	in	in	ADP
ajlm-41	14	109	environmental	environmental	ADJ
ajlm-41	14	110	and	and	CCONJ
ajlm-41	14	111	clinical	clinical	ADJ
ajlm-41	14	112	isolates	isolate	NOUN
ajlm-41	14	113	of	of	ADP
ajlm-41	14	114	v.	v.	ADP
ajlm-41	14	115	cholerae	cholerae	PROPN
ajlm-41	14	116	•	•	ADP
ajlm-41	14	117	conclusion	conclusion	NOUN
ajlm-41	14	118	•	•	NUM
ajlm-41	14	119	acknowledgements	acknowledgement	NOUN
ajlm-41	14	120	   	   	SPACE
ajlm-41	14	121	•	•	NOUN
ajlm-41	14	122	conflicting	conflict	VERB
ajlm-41	14	123	interests	interest	NOUN
ajlm-41	14	124	   	   	SPACE
ajlm-41	14	125	•	•	NUM
ajlm-41	14	126	authors	author	NOUN
ajlm-41	14	127	’	'	PUNCT
ajlm-41	14	128	contributions	contribution	NOUN
ajlm-41	14	129	•	•	NUM
ajlm-41	14	130	references	reference	NOUN
ajlm-41	14	131	abstract	abstract	ADJ
ajlm-41	14	132	top	top	PROPN
ajlm-41	14	133	↑	↑	PROPN
ajlm-41	14	134	background	background	NOUN
ajlm-41	14	135	:	:	PUNCT
ajlm-41	14	136	since	since	SCONJ
ajlm-41	14	137	1971	1971	NUM
ajlm-41	14	138	,	,	PUNCT
ajlm-41	14	139	kenya	kenya	PROPN
ajlm-41	14	140	has	have	AUX
ajlm-41	14	141	had	have	AUX
ajlm-41	14	142	repeated	repeat	VERB
ajlm-41	14	143	cholera	cholera	NOUN
ajlm-41	14	144	outbreaks	outbreak	NOUN
ajlm-41	14	145	.	.	PUNCT
ajlm-41	15	1	however	however	ADV
ajlm-41	15	2	,	,	PUNCT
ajlm-41	15	3	the	the	DET
ajlm-41	15	4	cause	cause	NOUN
ajlm-41	15	5	of	of	ADP
ajlm-41	15	6	seasonal	seasonal	ADJ
ajlm-41	15	7	epidemics	epidemic	NOUN
ajlm-41	15	8	of	of	ADP
ajlm-41	15	9	cholera	cholera	NOUN
ajlm-41	15	10	is	be	AUX
ajlm-41	15	11	not	not	PART
ajlm-41	15	12	fully	fully	ADV
ajlm-41	15	13	understood	understand	VERB
ajlm-41	15	14	and	and	CCONJ
ajlm-41	15	15	neither	neither	PRON
ajlm-41	15	16	are	be	VERB
ajlm-41	15	17	the	the	DET
ajlm-41	15	18	factors	factor	NOUN
ajlm-41	15	19	that	that	PRON
ajlm-41	15	20	drive	drive	VERB
ajlm-41	15	21	epidemics	epidemic	NOUN
ajlm-41	15	22	,	,	PUNCT
ajlm-41	15	23	both	both	CCONJ
ajlm-41	15	24	in	in	ADP
ajlm-41	15	25	kenya	kenya	NOUN
ajlm-41	15	26	and	and	CCONJ
ajlm-41	15	27	globally.objectives	globally.objective	NOUN
ajlm-41	15	28	:	:	PUNCT
ajlm-41	15	29	the	the	DET
ajlm-41	15	30	objectives	objective	NOUN
ajlm-41	15	31	of	of	ADP
ajlm-41	15	32	the	the	DET
ajlm-41	15	33	study	study	NOUN
ajlm-41	15	34	were	be	AUX
ajlm-41	15	35	to	to	PART
ajlm-41	15	36	determine	determine	VERB
ajlm-41	15	37	the	the	DET
ajlm-41	15	38	environmental	environmental	ADJ
ajlm-41	15	39	reservoirs	reservoir	NOUN
ajlm-41	15	40	of	of	ADP
ajlm-41	15	41	v.	v.	ADP
ajlm-41	15	42	cholerae	cholerae	PROPN
ajlm-41	15	43	during	during	ADP
ajlm-41	15	44	an	an	DET
ajlm-41	15	45	interepidemic	interepidemic	ADJ
ajlm-41	15	46	period	period	NOUN
ajlm-41	15	47	in	in	ADP
ajlm-41	15	48	kenya	kenya	NOUN
ajlm-41	15	49	and	and	CCONJ
ajlm-41	15	50	to	to	PART
ajlm-41	15	51	characterise	characterise	VERB
ajlm-41	15	52	their	their	PRON
ajlm-41	15	53	virulence	virulence	NOUN
ajlm-41	15	54	factors	factor	NOUN
ajlm-41	15	55	.	.	PUNCT
ajlm-41	16	1	methods	method	NOUN
ajlm-41	16	2	:	:	PUNCT
ajlm-41	16	3	one	one	NUM
ajlm-41	16	4	hundred	hundred	NUM
ajlm-41	16	5	(	(	PUNCT
ajlm-41	16	6	50	50	NUM
ajlm-41	16	7	clinical	clinical	ADJ
ajlm-41	16	8	,	,	PUNCT
ajlm-41	16	9	50	50	NUM
ajlm-41	16	10	environmental	environmental	ADJ
ajlm-41	16	11	)	)	PUNCT
ajlm-41	16	12	samples	sample	NOUN
ajlm-41	16	13	were	be	AUX
ajlm-41	16	14	tested	test	VERB
ajlm-41	16	15	for	for	ADP
ajlm-41	16	16	v.	v.	PROPN
ajlm-41	16	17	cholerae	cholerae	PROPN
ajlm-41	16	18	isolates	isolate	NOUN
ajlm-41	16	19	using	use	VERB
ajlm-41	16	20	both	both	DET
ajlm-41	16	21	simplex	simplex	NOUN
ajlm-41	16	22	and	and	CCONJ
ajlm-41	16	23	multiplex	multiplex	NOUN
ajlm-41	16	24	polymerase	polymerase	NOUN
ajlm-41	16	25	chain	chain	NOUN
ajlm-41	16	26	reaction	reaction	NOUN
ajlm-41	16	27	.	.	PUNCT
ajlm-41	17	1	results	result	NOUN
ajlm-41	17	2	:	:	PUNCT
ajlm-41	17	3	both	both	PRON
ajlm-41	17	4	sediments	sediment	NOUN
ajlm-41	17	5	and	and	CCONJ
ajlm-41	17	6	algae	algae	NOUN
ajlm-41	17	7	from	from	ADP
ajlm-41	17	8	fishing	fish	VERB
ajlm-41	17	9	and	and	CCONJ
ajlm-41	17	10	landing	landing	NOUN
ajlm-41	17	11	bays	bay	NOUN
ajlm-41	17	12	yielded	yield	VERB
ajlm-41	17	13	isolates	isolate	NOUN
ajlm-41	17	14	of	of	ADP
ajlm-41	17	15	v.	v.	ADP
ajlm-41	17	16	cholerae	cholerae	PROPN
ajlm-41	17	17	.	.	PUNCT
ajlm-41	18	1	clinical	clinical	ADJ
ajlm-41	18	2	strains	strain	NOUN
ajlm-41	18	3	were	be	AUX
ajlm-41	18	4	characterised	characterise	VERB
ajlm-41	18	5	along	along	ADP
ajlm-41	18	6	with	with	ADP
ajlm-41	18	7	the	the	DET
ajlm-41	18	8	environmental	environmental	ADJ
ajlm-41	18	9	strains	strain	NOUN
ajlm-41	18	10	for	for	ADP
ajlm-41	18	11	comparison	comparison	NOUN
ajlm-41	18	12	.	.	PUNCT
ajlm-41	19	1	all	all	DET
ajlm-41	19	2	clinical	clinical	ADJ
ajlm-41	19	3	strains	strain	NOUN
ajlm-41	19	4	harboured	harbour	VERB
ajlm-41	19	5	ctxa	ctxa	ADJ
ajlm-41	19	6	,	,	PUNCT
ajlm-41	19	7	tcpa	tcpa	NOUN
ajlm-41	19	8	(	(	PUNCT
ajlm-41	19	9	el	el	PROPN
ajlm-41	19	10	tor	tor	PROPN
ajlm-41	19	11	)	)	PUNCT
ajlm-41	19	12	,	,	PUNCT
ajlm-41	19	13	ompu	ompu	PROPN
ajlm-41	19	14	,	,	PUNCT
ajlm-41	19	15	zot	zot	PROPN
ajlm-41	19	16	,	,	PUNCT
ajlm-41	19	17	ace	ace	NOUN
ajlm-41	19	18	,	,	PUNCT
ajlm-41	19	19	toxr	toxr	NOUN
ajlm-41	19	20	,	,	PUNCT
ajlm-41	19	21	hyla	hyla	PROPN
ajlm-41	19	22	(	(	PUNCT
ajlm-41	19	23	el	el	PROPN
ajlm-41	19	24	tor	tor	PROPN
ajlm-41	19	25	)	)	PUNCT
ajlm-41	19	26	and	and	CCONJ
ajlm-41	19	27	tcpi	tcpi	NOUN
ajlm-41	19	28	genes	gene	NOUN
ajlm-41	19	29	.	.	PUNCT
ajlm-41	20	1	prevalence	prevalence	NOUN
ajlm-41	20	2	for	for	ADP
ajlm-41	20	3	virulence	virulence	NOUN
ajlm-41	20	4	genes	gene	NOUN
ajlm-41	20	5	in	in	ADP
ajlm-41	20	6	environmental	environmental	ADJ
ajlm-41	20	7	strains	strain	NOUN
ajlm-41	20	8	was	be	AUX
ajlm-41	20	9	hyla	hyla	ADJ
ajlm-41	20	10	(	(	PUNCT
ajlm-41	20	11	el	el	PROPN
ajlm-41	20	12	tor	tor	PROPN
ajlm-41	20	13	)	)	PUNCT
ajlm-41	20	14	(	(	PUNCT
ajlm-41	20	15	10	10	NUM
ajlm-41	20	16	%	%	NOUN
ajlm-41	20	17	)	)	PUNCT
ajlm-41	20	18	,	,	PUNCT
ajlm-41	20	19	toxr	toxr	NOUN
ajlm-41	20	20	(	(	PUNCT
ajlm-41	20	21	24	24	NUM
ajlm-41	20	22	%	%	NOUN
ajlm-41	20	23	)	)	PUNCT
ajlm-41	20	24	,	,	PUNCT
ajlm-41	20	25	zot	zot	PROPN
ajlm-41	20	26	(	(	PUNCT
ajlm-41	20	27	22	22	NUM
ajlm-41	20	28	%	%	NOUN
ajlm-41	20	29	)	)	PUNCT
ajlm-41	20	30	,	,	PUNCT
ajlm-41	20	31	ctxa	ctxa	VERB
ajlm-41	20	32	(	(	PUNCT
ajlm-41	20	33	12	12	NUM
ajlm-41	20	34	%	%	NOUN
ajlm-41	20	35	)	)	PUNCT
ajlm-41	20	36	,	,	PUNCT
ajlm-41	20	37	tcpi	tcpi	NOUN
ajlm-41	20	38	(	(	PUNCT
ajlm-41	20	39	8	8	NUM
ajlm-41	20	40	%	%	NOUN
ajlm-41	20	41	)	)	PUNCT
ajlm-41	20	42	,	,	PUNCT
ajlm-41	20	43	hyla	hyla	NOUN
ajlm-41	20	44	(	(	PUNCT
ajlm-41	20	45	26	26	NUM
ajlm-41	20	46	%	%	NOUN
ajlm-41	20	47	)	)	PUNCT
ajlm-41	20	48	and	and	CCONJ
ajlm-41	20	49	tcpa	tcpa	NOUN
ajlm-41	20	50	(	(	PUNCT
ajlm-41	20	51	12	12	NUM
ajlm-41	20	52	%	%	NOUN
ajlm-41	20	53	)	)	PUNCT
ajlm-41	20	54	.	.	PUNCT
ajlm-41	21	1	conclusion	conclusion	NOUN
ajlm-41	21	2	:	:	PUNCT
ajlm-41	21	3	the	the	DET
ajlm-41	21	4	study	study	NOUN
ajlm-41	21	5	sites	site	NOUN
ajlm-41	21	6	,	,	PUNCT
ajlm-41	21	7	including	include	VERB
ajlm-41	21	8	landing	landing	NOUN
ajlm-41	21	9	bays	bay	NOUN
ajlm-41	21	10	and	and	CCONJ
ajlm-41	21	11	beaches	beach	NOUN
ajlm-41	21	12	,	,	PUNCT
ajlm-41	21	13	contained	contain	VERB
ajlm-41	21	14	environmental	environmental	ADJ
ajlm-41	21	15	v.	v.	ADP
ajlm-41	21	16	cholerae	cholerae	PROPN
ajlm-41	21	17	,	,	PUNCT
ajlm-41	21	18	suggesting	suggest	VERB
ajlm-41	21	19	that	that	SCONJ
ajlm-41	21	20	these	these	PRON
ajlm-41	21	21	may	may	AUX
ajlm-41	21	22	be	be	AUX
ajlm-41	21	23	reservoirs	reservoir	NOUN
ajlm-41	21	24	for	for	ADP
ajlm-41	21	25	frequent	frequent	ADJ
ajlm-41	21	26	epidemics	epidemic	NOUN
ajlm-41	21	27	.	.	PUNCT
ajlm-41	22	1	improved	improve	VERB
ajlm-41	22	2	hygiene	hygiene	NOUN
ajlm-41	22	3	and	and	CCONJ
ajlm-41	22	4	fish	fish	NOUN
ajlm-41	22	5	-	-	PUNCT
ajlm-41	22	6	handling	handling	NOUN
ajlm-41	22	7	techniques	technique	NOUN
ajlm-41	22	8	will	will	AUX
ajlm-41	22	9	be	be	AUX
ajlm-41	22	10	important	important	ADJ
ajlm-41	22	11	in	in	ADP
ajlm-41	22	12	reducing	reduce	VERB
ajlm-41	22	13	the	the	DET
ajlm-41	22	14	persistence	persistence	NOUN
ajlm-41	22	15	of	of	ADP
ajlm-41	22	16	reservoirs	reservoir	NOUN
ajlm-41	22	17	.	.	PUNCT
ajlm-41	23	1	introduction	introduction	NOUN
ajlm-41	23	2	top	top	PROPN
ajlm-41	23	3	↑	↑	PROPN
ajlm-41	23	4	since	since	SCONJ
ajlm-41	23	5	1971	1971	NUM
ajlm-41	23	6	,	,	PUNCT
ajlm-41	23	7	kenya	kenya	PROPN
ajlm-41	23	8	has	have	AUX
ajlm-41	23	9	suffered	suffer	VERB
ajlm-41	23	10	repeated	repeated	ADJ
ajlm-41	23	11	cholera	cholera	NOUN
ajlm-41	23	12	outbreaks	outbreak	NOUN
ajlm-41	23	13	.	.	PUNCT
ajlm-41	24	1	from	from	ADP
ajlm-41	24	2	1974	1974	NUM
ajlm-41	24	3	to	to	ADP
ajlm-41	24	4	1989	1989	NUM
ajlm-41	24	5	,	,	PUNCT
ajlm-41	24	6	outbreaks	outbreak	NOUN
ajlm-41	24	7	were	be	AUX
ajlm-41	24	8	reported	report	VERB
ajlm-41	24	9	every	every	DET
ajlm-41	24	10	year	year	NOUN
ajlm-41	24	11	with	with	ADP
ajlm-41	24	12	an	an	DET
ajlm-41	24	13	average	average	ADJ
ajlm-41	24	14	case	case	NOUN
ajlm-41	24	15	fatality	fatality	NOUN
ajlm-41	24	16	rate	rate	NOUN
ajlm-41	24	17	of	of	ADP
ajlm-41	24	18	3.6%.1	3.6%.1	NUM
ajlm-41	24	19	more	more	ADJ
ajlm-41	24	20	cases	case	NOUN
ajlm-41	24	21	have	have	AUX
ajlm-41	24	22	been	be	AUX
ajlm-41	24	23	reported	report	VERB
ajlm-41	24	24	in	in	ADP
ajlm-41	24	25	kenya	kenya	PROPN
ajlm-41	24	26	since	since	SCONJ
ajlm-41	24	27	2005	2005	NUM
ajlm-41	24	28	and	and	CCONJ
ajlm-41	24	29	an	an	DET
ajlm-41	24	30	outbreak	outbreak	NOUN
ajlm-41	24	31	in	in	ADP
ajlm-41	24	32	2007	2007	NUM
ajlm-41	24	33	had	have	VERB
ajlm-41	24	34	a	a	DET
ajlm-41	24	35	case	case	NOUN
ajlm-41	24	36	fatality	fatality	NOUN
ajlm-41	24	37	of	of	ADP
ajlm-41	24	38	up	up	ADP
ajlm-41	24	39	to	to	ADP
ajlm-41	24	40	5.6%.2	5.6%.2	NUM
ajlm-41	24	41	in	in	ADP
ajlm-41	24	42	2011	2011	NUM
ajlm-41	24	43	,	,	PUNCT
ajlm-41	24	44	60	60	NUM
ajlm-41	24	45	cholera	cholera	NOUN
ajlm-41	24	46	cases	case	NOUN
ajlm-41	24	47	,	,	PUNCT
ajlm-41	24	48	including	include	VERB
ajlm-41	24	49	10	10	NUM
ajlm-41	24	50	laboratory	laboratory	NOUN
ajlm-41	24	51	-	-	PUNCT
ajlm-41	24	52	confirmed	confirm	VERB
ajlm-41	24	53	cases	case	NOUN
ajlm-41	24	54	and	and	CCONJ
ajlm-41	24	55	one	one	NUM
ajlm-41	24	56	refugee	refugee	NOUN
ajlm-41	24	57	death	death	NOUN
ajlm-41	24	58	,	,	PUNCT
ajlm-41	24	59	were	be	AUX
ajlm-41	24	60	reported	report	VERB
ajlm-41	24	61	in	in	ADP
ajlm-41	24	62	the	the	DET
ajlm-41	24	63	world	world	NOUN
ajlm-41	24	64	’s	’s	PART
ajlm-41	24	65	largest	large	ADJ
ajlm-41	24	66	refugee	refugee	NOUN
ajlm-41	24	67	camp	camp	NOUN
ajlm-41	24	68	in	in	ADP
ajlm-41	24	69	dadaab	dadaab	PROPN
ajlm-41	24	70	,	,	PUNCT
ajlm-41	24	71	kenya.3significant	kenya.3significant	PROPN
ajlm-41	24	72	advances	advance	NOUN
ajlm-41	24	73	have	have	AUX
ajlm-41	24	74	been	be	AUX
ajlm-41	24	75	made	make	VERB
ajlm-41	24	76	in	in	ADP
ajlm-41	24	77	understanding	understand	VERB
ajlm-41	24	78	the	the	DET
ajlm-41	24	79	molecular	molecular	ADJ
ajlm-41	24	80	basis	basis	NOUN
ajlm-41	24	81	of	of	ADP
ajlm-41	24	82	vibrio	vibrio	ADJ
ajlm-41	24	83	cholerae	cholerae	NOUN
ajlm-41	24	84	pathogenicity	pathogenicity	PROPN
ajlm-41	24	85	,	,	PUNCT
ajlm-41	24	86	including	include	VERB
ajlm-41	24	87	the	the	DET
ajlm-41	24	88	identification	identification	NOUN
ajlm-41	24	89	of	of	ADP
ajlm-41	24	90	environmental	environmental	ADJ
ajlm-41	24	91	reservoirs	reservoir	NOUN
ajlm-41	24	92	for	for	ADP
ajlm-41	24	93	the	the	DET
ajlm-41	24	94	microorganism.4	microorganism.4	PROPN
ajlm-41	24	95	it	it	PRON
ajlm-41	24	96	has	have	AUX
ajlm-41	24	97	also	also	ADV
ajlm-41	24	98	been	be	AUX
ajlm-41	24	99	shown	show	VERB
ajlm-41	24	100	that	that	SCONJ
ajlm-41	24	101	a	a	DET
ajlm-41	24	102	7th	7th	ADJ
ajlm-41	24	103	cholera	cholera	NOUN
ajlm-41	24	104	pandemic	pandemic	NOUN
ajlm-41	24	105	spread	spread	VERB
ajlm-41	24	106	from	from	ADP
ajlm-41	24	107	the	the	DET
ajlm-41	24	108	bay	bay	NOUN
ajlm-41	24	109	of	of	ADP
ajlm-41	24	110	bengal	bengal	PROPN
ajlm-41	24	111	in	in	ADP
ajlm-41	24	112	at	at	ADV
ajlm-41	24	113	least	least	ADV
ajlm-41	24	114	three	three	NUM
ajlm-41	24	115	independent	independent	ADJ
ajlm-41	24	116	but	but	CCONJ
ajlm-41	24	117	overlapping	overlap	VERB
ajlm-41	24	118	waves	wave	NOUN
ajlm-41	24	119	with	with	ADP
ajlm-41	24	120	a	a	DET
ajlm-41	24	121	common	common	ADJ
ajlm-41	24	122	ancestor	ancestor	NOUN
ajlm-41	24	123	in	in	ADP
ajlm-41	24	124	the	the	DET
ajlm-41	24	125	1950s	1950	NOUN
ajlm-41	24	126	and	and	CCONJ
ajlm-41	24	127	several	several	ADJ
ajlm-41	24	128	transcontinental	transcontinental	ADJ
ajlm-41	24	129	transmission	transmission	NOUN
ajlm-41	24	130	events	event	NOUN
ajlm-41	24	131	have	have	AUX
ajlm-41	24	132	been	be	AUX
ajlm-41	24	133	identified.5	identified.5	VERB
ajlm-41	24	134	the	the	DET
ajlm-41	24	135	main	main	ADJ
ajlm-41	24	136	reservoirs	reservoir	NOUN
ajlm-41	24	137	of	of	ADP
ajlm-41	24	138	v.	v.	ADP
ajlm-41	24	139	cholerae	cholerae	PROPN
ajlm-41	24	140	are	be	AUX
ajlm-41	24	141	humans	human	NOUN
ajlm-41	24	142	and	and	CCONJ
ajlm-41	24	143	aquatic	aquatic	ADJ
ajlm-41	24	144	sources	source	NOUN
ajlm-41	24	145	such	such	ADJ
ajlm-41	24	146	as	as	ADP
ajlm-41	24	147	brackish	brackish	ADJ
ajlm-41	24	148	water	water	NOUN
ajlm-41	24	149	and	and	CCONJ
ajlm-41	24	150	estuaries.6	estuaries.6	PROPN
ajlm-41	24	151	ahmed	ahme	VERB
ajlm-41	24	152	et	et	PROPN
ajlm-41	24	153	al.7	al.7	PROPN
ajlm-41	24	154	showed	show	VERB
ajlm-41	24	155	that	that	SCONJ
ajlm-41	24	156	multiple	multiple	ADJ
ajlm-41	24	157	genetic	genetic	ADJ
ajlm-41	24	158	lineages	lineage	NOUN
ajlm-41	24	159	of	of	ADP
ajlm-41	24	160	 	 	SPACE
ajlm-41	24	161	v.	v.	ADP
ajlm-41	24	162	cholerae	cholerae	PROPN
ajlm-41	24	163	 	 	SPACE
ajlm-41	24	164	were	be	AUX
ajlm-41	24	165	simultaneously	simultaneously	ADV
ajlm-41	24	166	infecting	infect	VERB
ajlm-41	24	167	persons	person	NOUN
ajlm-41	24	168	in	in	ADP
ajlm-41	24	169	kenya	kenya	PROPN
ajlm-41	24	170	.	.	PUNCT
ajlm-41	25	1	this	this	DET
ajlm-41	25	2	finding	finding	NOUN
ajlm-41	25	3	is	be	AUX
ajlm-41	25	4	consistent	consistent	ADJ
ajlm-41	25	5	with	with	ADP
ajlm-41	25	6	the	the	DET
ajlm-41	25	7	simultaneous	simultaneous	ADJ
ajlm-41	25	8	emergence	emergence	NOUN
ajlm-41	25	9	of	of	ADP
ajlm-41	25	10	multiple	multiple	ADJ
ajlm-41	25	11	distinct	distinct	ADJ
ajlm-41	25	12	genetic	genetic	ADJ
ajlm-41	25	13	lineages	lineage	NOUN
ajlm-41	25	14	of	of	ADP
ajlm-41	25	15	 	 	SPACE
ajlm-41	25	16	v.	v.	ADP
ajlm-41	25	17	cholerae	cholerae	PROPN
ajlm-41	25	18	 	 	SPACE
ajlm-41	25	19	from	from	ADP
ajlm-41	25	20	endemic	endemic	ADJ
ajlm-41	25	21	environmental	environmental	ADJ
ajlm-41	25	22	reservoirs	reservoir	NOUN
ajlm-41	25	23	rather	rather	ADV
ajlm-41	25	24	than	than	ADP
ajlm-41	25	25	recent	recent	ADJ
ajlm-41	25	26	introduction	introduction	NOUN
ajlm-41	25	27	and	and	CCONJ
ajlm-41	25	28	spread	spread	VERB
ajlm-41	25	29	by	by	ADP
ajlm-41	25	30	travelers	traveler	NOUN
ajlm-41	25	31	.	.	PUNCT
ajlm-41	26	1	however	however	ADV
ajlm-41	26	2	,	,	PUNCT
ajlm-41	26	3	the	the	DET
ajlm-41	26	4	cause	cause	NOUN
ajlm-41	26	5	of	of	ADP
ajlm-41	26	6	seasonal	seasonal	ADJ
ajlm-41	26	7	epidemics	epidemic	NOUN
ajlm-41	26	8	of	of	ADP
ajlm-41	26	9	cholera	cholera	NOUN
ajlm-41	26	10	is	be	AUX
ajlm-41	26	11	not	not	PART
ajlm-41	26	12	fully	fully	ADV
ajlm-41	26	13	understood	understand	VERB
ajlm-41	26	14	and	and	CCONJ
ajlm-41	26	15	neither	neither	PRON
ajlm-41	26	16	are	be	VERB
ajlm-41	26	17	the	the	DET
ajlm-41	26	18	factors	factor	NOUN
ajlm-41	26	19	that	that	PRON
ajlm-41	26	20	drive	drive	VERB
ajlm-41	26	21	epidemics	epidemic	NOUN
ajlm-41	26	22	,	,	PUNCT
ajlm-41	26	23	both	both	CCONJ
ajlm-41	26	24	in	in	ADP
ajlm-41	26	25	kenya	kenya	NOUN
ajlm-41	26	26	and	and	CCONJ
ajlm-41	26	27	globally	globally	ADV
ajlm-41	26	28	.	.	PUNCT
ajlm-41	27	1	the	the	DET
ajlm-41	27	2	objectives	objective	NOUN
ajlm-41	27	3	of	of	ADP
ajlm-41	27	4	this	this	DET
ajlm-41	27	5	study	study	NOUN
ajlm-41	27	6	were	be	AUX
ajlm-41	27	7	to	to	PART
ajlm-41	27	8	determine	determine	VERB
ajlm-41	27	9	the	the	DET
ajlm-41	27	10	environmental	environmental	ADJ
ajlm-41	27	11	reservoirs	reservoir	NOUN
ajlm-41	27	12	of	of	ADP
ajlm-41	27	13	v.	v.	ADP
ajlm-41	27	14	cholera	cholera	NOUN
ajlm-41	27	15	during	during	ADP
ajlm-41	27	16	an	an	DET
ajlm-41	27	17	interepidemic	interepidemic	ADJ
ajlm-41	27	18	period	period	NOUN
ajlm-41	27	19	in	in	ADP
ajlm-41	27	20	kenya	kenya	NOUN
ajlm-41	27	21	and	and	CCONJ
ajlm-41	27	22	to	to	PART
ajlm-41	27	23	characterise	characterise	VERB
ajlm-41	27	24	their	their	PRON
ajlm-41	27	25	virulence	virulence	NOUN
ajlm-41	27	26	factors	factor	NOUN
ajlm-41	27	27	.	.	PUNCT
ajlm-41	28	1	research	research	NOUN
ajlm-41	28	2	method	method	NOUN
ajlm-41	28	3	and	and	CCONJ
ajlm-41	28	4	design	design	VERB
ajlm-41	28	5	top	top	ADJ
ajlm-41	28	6	↑	↑	NOUN
ajlm-41	28	7	the	the	DET
ajlm-41	28	8	study	study	NOUN
ajlm-41	28	9	was	be	AUX
ajlm-41	28	10	conducted	conduct	VERB
ajlm-41	28	11	in	in	ADP
ajlm-41	28	12	the	the	DET
ajlm-41	28	13	coastal	coastal	ADJ
ajlm-41	28	14	and	and	CCONJ
ajlm-41	28	15	western	western	ADJ
ajlm-41	28	16	regions	region	NOUN
ajlm-41	28	17	of	of	ADP
ajlm-41	28	18	kenya	kenya	NOUN
ajlm-41	28	19	from	from	ADP
ajlm-41	28	20	february	february	PROPN
ajlm-41	28	21	2010	2010	NUM
ajlm-41	28	22	to	to	ADP
ajlm-41	28	23	november	november	PROPN
ajlm-41	28	24	2010	2010	NUM
ajlm-41	28	25	.	.	PUNCT
ajlm-41	29	1	the	the	DET
ajlm-41	29	2	coastal	coastal	ADJ
ajlm-41	29	3	region	region	NOUN
ajlm-41	29	4	sampling	sample	VERB
ajlm-41	29	5	points	point	NOUN
ajlm-41	29	6	were	be	AUX
ajlm-41	29	7	distributed	distribute	VERB
ajlm-41	29	8	in	in	ADP
ajlm-41	29	9	the	the	DET
ajlm-41	29	10	cholera	cholera	NOUN
ajlm-41	29	11	-	-	PUNCT
ajlm-41	29	12	endemic	endemic	ADJ
ajlm-41	29	13	districts	district	NOUN
ajlm-41	29	14	of	of	ADP
ajlm-41	29	15	kwale	kwale	PROPN
ajlm-41	29	16	,	,	PUNCT
ajlm-41	29	17	malindi	malindi	PROPN
ajlm-41	29	18	,	,	PUNCT
ajlm-41	29	19	mombasa	mombasa	PROPN
ajlm-41	29	20	and	and	CCONJ
ajlm-41	29	21	kilifi	kilifi	PROPN
ajlm-41	29	22	(	(	PUNCT
ajlm-41	29	23	figure	figure	NOUN
ajlm-41	29	24	1	1	NUM
ajlm-41	29	25	)	)	PUNCT
ajlm-41	29	26	.	.	PUNCT
ajlm-41	30	1	at	at	ADP
ajlm-41	30	2	each	each	DET
ajlm-41	30	3	sampling	sampling	NOUN
ajlm-41	30	4	point	point	NOUN
ajlm-41	30	5	,	,	PUNCT
ajlm-41	30	6	preference	preference	NOUN
ajlm-41	30	7	was	be	AUX
ajlm-41	30	8	given	give	VERB
ajlm-41	30	9	to	to	ADP
ajlm-41	30	10	watering	watering	NOUN
ajlm-41	30	11	points	point	NOUN
ajlm-41	30	12	and	and	CCONJ
ajlm-41	30	13	where	where	SCONJ
ajlm-41	30	14	there	there	PRON
ajlm-41	30	15	was	be	VERB
ajlm-41	30	16	human	human	ADJ
ajlm-41	30	17	activity	activity	NOUN
ajlm-41	30	18	,	,	PUNCT
ajlm-41	30	19	as	as	SCONJ
ajlm-41	30	20	recommended	recommend	VERB
ajlm-41	30	21	by	by	ADP
ajlm-41	30	22	local	local	ADJ
ajlm-41	30	23	health	health	NOUN
ajlm-41	30	24	officials	official	NOUN
ajlm-41	30	25	.	.	PUNCT
ajlm-41	31	1	the	the	DET
ajlm-41	31	2	western	western	ADJ
ajlm-41	31	3	region	region	NOUN
ajlm-41	31	4	sampling	sample	VERB
ajlm-41	31	5	points	point	NOUN
ajlm-41	31	6	included	include	VERB
ajlm-41	31	7	the	the	DET
ajlm-41	31	8	districts	district	NOUN
ajlm-41	31	9	of	of	ADP
ajlm-41	31	10	kisumu	kisumu	PROPN
ajlm-41	31	11	,	,	PUNCT
ajlm-41	31	12	siaya	siaya	PROPN
ajlm-41	31	13	,	,	PUNCT
ajlm-41	31	14	rachuonyo	rachuonyo	PROPN
ajlm-41	31	15	,	,	PUNCT
ajlm-41	31	16	homa	homa	PROPN
ajlm-41	31	17	bay	bay	PROPN
ajlm-41	31	18	,	,	PUNCT
ajlm-41	31	19	nandi	nandi	PROPN
ajlm-41	31	20	hills	hills	PROPN
ajlm-41	31	21	,	,	PUNCT
ajlm-41	31	22	nyando	nyando	ADJ
ajlm-41	31	23	,	,	PUNCT
ajlm-41	31	24	bondo	bondo	NOUN
ajlm-41	31	25	,	,	PUNCT
ajlm-41	31	26	vihiga	vihiga	ADJ
ajlm-41	31	27	and	and	CCONJ
ajlm-41	31	28	busia	busia	NOUN
ajlm-41	31	29	.	.	PUNCT
ajlm-41	32	1	one	one	NUM
ajlm-41	32	2	sample	sample	NOUN
ajlm-41	32	3	of	of	ADP
ajlm-41	32	4	water	water	NOUN
ajlm-41	32	5	,	,	PUNCT
ajlm-41	32	6	zooplankton	zooplankton	NOUN
ajlm-41	32	7	,	,	PUNCT
ajlm-41	32	8	phytoplankton	phytoplankton	NOUN
ajlm-41	32	9	,	,	PUNCT
ajlm-41	32	10	sediments	sediment	NOUN
ajlm-41	32	11	and/or	and/or	CCONJ
ajlm-41	32	12	floating	float	VERB
ajlm-41	32	13	vegetation	vegetation	NOUN
ajlm-41	32	14	was	be	AUX
ajlm-41	32	15	collected	collect	VERB
ajlm-41	32	16	at	at	ADP
ajlm-41	32	17	each	each	DET
ajlm-41	32	18	site	site	NOUN
ajlm-41	32	19	as	as	ADP
ajlm-41	32	20	available	available	ADJ
ajlm-41	32	21	,	,	PUNCT
ajlm-41	32	22	using	use	VERB
ajlm-41	32	23	the	the	DET
ajlm-41	32	24	method	method	NOUN
ajlm-41	32	25	described	describe	VERB
ajlm-41	32	26	by	by	ADP
ajlm-41	32	27	huq	huq	PROPN
ajlm-41	32	28	et	et	PROPN
ajlm-41	32	29	al.8	al.8	PROPN
ajlm-41	32	30	figure	figure	NOUN
ajlm-41	32	31	1	1	NUM
ajlm-41	32	32	:	:	PUNCT
ajlm-41	32	33	coastal	coastal	ADJ
ajlm-41	32	34	and	and	CCONJ
ajlm-41	32	35	western	western	ADJ
ajlm-41	32	36	regions	region	NOUN
ajlm-41	32	37	of	of	ADP
ajlm-41	32	38	kenya	kenya	NOUN
ajlm-41	32	39	where	where	SCONJ
ajlm-41	32	40	environmental	environmental	ADJ
ajlm-41	32	41	samples	sample	NOUN
ajlm-41	32	42	were	be	AUX
ajlm-41	32	43	collected	collect	VERB
ajlm-41	32	44	.	.	PUNCT
ajlm-41	33	1	isolation	isolation	NOUN
ajlm-41	33	2	began	begin	VERB
ajlm-41	33	3	on	on	ADP
ajlm-41	33	4	the	the	DET
ajlm-41	33	5	first	first	ADJ
ajlm-41	33	6	day	day	NOUN
ajlm-41	33	7	after	after	ADP
ajlm-41	33	8	collection	collection	NOUN
ajlm-41	33	9	of	of	ADP
ajlm-41	33	10	the	the	DET
ajlm-41	33	11	environmental	environmental	ADJ
ajlm-41	33	12	samples	sample	NOUN
ajlm-41	33	13	.	.	PUNCT
ajlm-41	34	1	one	one	NUM
ajlm-41	34	2	 	 	SPACE
ajlm-41	34	3	ml	ml	NOUN
ajlm-41	34	4	each	each	PRON
ajlm-41	34	5	of	of	ADP
ajlm-41	34	6	the	the	DET
ajlm-41	34	7	zooplankton	zooplankton	NOUN
ajlm-41	34	8	and	and	CCONJ
ajlm-41	34	9	phytoplankton	phytoplankton	NOUN
ajlm-41	34	10	homogenates	homogenate	NOUN
ajlm-41	34	11	was	be	AUX
ajlm-41	34	12	enriched	enrich	VERB
ajlm-41	34	13	in	in	ADP
ajlm-41	34	14	10	10	NUM
ajlm-41	34	15	 	 	SPACE
ajlm-41	34	16	ml	ml	PROPN
ajlm-41	34	17	(	(	PUNCT
ajlm-41	34	18	1x	1x	NUM
ajlm-41	34	19	)	)	PUNCT
ajlm-41	34	20	alkaline	alkaline	NOUN
ajlm-41	34	21	peptone	peptone	NOUN
ajlm-41	34	22	water	water	NOUN
ajlm-41	34	23	.	.	PUNCT
ajlm-41	35	1	ten	ten	NUM
ajlm-41	35	2	 	 	SPACE
ajlm-41	35	3	ml	ml	NOUN
ajlm-41	35	4	of	of	ADP
ajlm-41	35	5	each	each	DET
ajlm-41	35	6	plant	plant	NOUN
ajlm-41	35	7	homogenate	homogenate	NOUN
ajlm-41	35	8	and	and	CCONJ
ajlm-41	35	9	sediment	sediment	NOUN
ajlm-41	35	10	sample	sample	NOUN
ajlm-41	35	11	were	be	AUX
ajlm-41	35	12	also	also	ADV
ajlm-41	35	13	enriched	enrich	VERB
ajlm-41	35	14	in	in	ADP
ajlm-41	35	15	5	5	NUM
ajlm-41	35	16	 	 	SPACE
ajlm-41	35	17	ml	ml	NOUN
ajlm-41	35	18	triple	triple	ADJ
ajlm-41	35	19	-	-	PUNCT
ajlm-41	35	20	strength	strength	NOUN
ajlm-41	35	21	alkaline	alkaline	NOUN
ajlm-41	35	22	peptone	peptone	NOUN
ajlm-41	35	23	water	water	NOUN
ajlm-41	35	24	.	.	PUNCT
ajlm-41	36	1	on	on	ADP
ajlm-41	36	2	the	the	DET
ajlm-41	36	3	second	second	ADJ
ajlm-41	36	4	day	day	NOUN
ajlm-41	36	5	,	,	PUNCT
ajlm-41	36	6	subculturing	subculturing	NOUN
ajlm-41	36	7	was	be	AUX
ajlm-41	36	8	done	do	VERB
ajlm-41	36	9	from	from	ADP
ajlm-41	36	10	the	the	DET
ajlm-41	36	11	previous	previous	ADJ
ajlm-41	36	12	day	day	NOUN
ajlm-41	36	13	’s	’s	PART
ajlm-41	36	14	alkaline	alkaline	NOUN
ajlm-41	36	15	peptone	peptone	NOUN
ajlm-41	36	16	water	water	NOUN
ajlm-41	36	17	inoculates	inoculate	VERB
ajlm-41	36	18	on	on	ADP
ajlm-41	36	19	plates	plate	NOUN
ajlm-41	36	20	of	of	ADP
ajlm-41	36	21	thiosulphate	thiosulphate	ADJ
ajlm-41	36	22	citrate	citrate	NOUN
ajlm-41	36	23	bile	bile	NOUN
ajlm-41	36	24	salts	salt	NOUN
ajlm-41	36	25	(	(	PUNCT
ajlm-41	36	26	tcbs	tcbs	NUM
ajlm-41	36	27	)	)	PUNCT
ajlm-41	36	28	.	.	PUNCT
ajlm-41	37	1	on	on	ADP
ajlm-41	37	2	day	day	NOUN
ajlm-41	37	3	three	three	NUM
ajlm-41	37	4	,	,	PUNCT
ajlm-41	37	5	the	the	DET
ajlm-41	37	6	presence	presence	NOUN
ajlm-41	37	7	of	of	ADP
ajlm-41	37	8	yellow	yellow	ADJ
ajlm-41	37	9	mucoid	mucoid	ADJ
ajlm-41	37	10	colonies	colony	NOUN
ajlm-41	37	11	was	be	AUX
ajlm-41	37	12	considered	consider	VERB
ajlm-41	37	13	presumptive	presumptive	ADJ
ajlm-41	37	14	for	for	ADP
ajlm-41	37	15	v.	v.	ADP
ajlm-41	37	16	cholerae	cholerae	PROPN
ajlm-41	37	17	.	.	PUNCT
ajlm-41	38	1	presumptive	presumptive	ADJ
ajlm-41	38	2	colonies	colony	NOUN
ajlm-41	38	3	were	be	AUX
ajlm-41	38	4	tested	test	VERB
ajlm-41	38	5	by	by	ADP
ajlm-41	38	6	measuring	measure	VERB
ajlm-41	38	7	their	their	PRON
ajlm-41	38	8	reaction	reaction	NOUN
ajlm-41	38	9	to	to	ADP
ajlm-41	38	10	an	an	DET
ajlm-41	38	11	oxidase	oxidase	NOUN
ajlm-41	38	12	reagent	reagent	NOUN
ajlm-41	38	13	(	(	PUNCT
ajlm-41	38	14	1	1	NUM
ajlm-41	38	15	%	%	NOUN
ajlm-41	38	16	dimethyl	dimethyl	NOUN
ajlm-41	38	17	-	-	PUNCT
ajlm-41	38	18	p	p	NOUN
ajlm-41	38	19	-	-	PUNCT
ajlm-41	38	20	phenylene	phenylene	NOUN
ajlm-41	38	21	-	-	PUNCT
ajlm-41	38	22	diamine	diamine	NOUN
ajlm-41	38	23	dihydrochloride	dihydrochloride	NOUN
ajlm-41	38	24	)	)	PUNCT
ajlm-41	38	25	,	,	PUNCT
ajlm-41	38	26	along	along	ADP
ajlm-41	38	27	with	with	ADP
ajlm-41	38	28	other	other	ADJ
ajlm-41	38	29	biochemical	biochemical	ADJ
ajlm-41	38	30	tests	test	NOUN
ajlm-41	38	31	(	(	PUNCT
ajlm-41	38	32	voges	voge	VERB
ajlm-41	38	33	proskauer	proskauer	NOUN
ajlm-41	38	34	,	,	PUNCT
ajlm-41	38	35	indole	indole	ADJ
ajlm-41	38	36	and	and	CCONJ
ajlm-41	38	37	carbohydrate	carbohydrate	NOUN
ajlm-41	38	38	fermentation	fermentation	NOUN
ajlm-41	38	39	)	)	PUNCT
ajlm-41	38	40	.	.	PUNCT
ajlm-41	39	1	the	the	DET
ajlm-41	39	2	environmental	environmental	ADJ
ajlm-41	39	3	strains	strain	NOUN
ajlm-41	39	4	agglutinated	agglutinate	VERB
ajlm-41	39	5	with	with	ADP
ajlm-41	39	6	polyvalent	polyvalent	NOUN
ajlm-41	39	7	o	o	NOUN
ajlm-41	39	8	antisera	antisera	NOUN
ajlm-41	39	9	and	and	CCONJ
ajlm-41	39	10	were	be	AUX
ajlm-41	39	11	sucrose	sucrose	VERB
ajlm-41	39	12	fermenters	fermenter	NOUN
ajlm-41	39	13	.	.	PUNCT
ajlm-41	40	1	they	they	PRON
ajlm-41	40	2	formed	form	VERB
ajlm-41	40	3	large	large	ADJ
ajlm-41	40	4	yellow	yellow	ADJ
ajlm-41	40	5	mucoid	mucoid	ADJ
ajlm-41	40	6	colonies	colony	NOUN
ajlm-41	40	7	on	on	ADP
ajlm-41	40	8	the	the	DET
ajlm-41	40	9	tcbs	tcb	NOUN
ajlm-41	40	10	.	.	PUNCT
ajlm-41	41	1	colonies	colony	NOUN
ajlm-41	41	2	were	be	AUX
ajlm-41	41	3	also	also	ADV
ajlm-41	41	4	gram	gram	NOUN
ajlm-41	41	5	stained	stain	VERB
ajlm-41	41	6	to	to	PART
ajlm-41	41	7	confirm	confirm	VERB
ajlm-41	41	8	the	the	DET
ajlm-41	41	9	morphological	morphological	ADJ
ajlm-41	41	10	characteristics	characteristic	NOUN
ajlm-41	41	11	of	of	ADP
ajlm-41	41	12	the	the	DET
ajlm-41	41	13	isolates	isolate	NOUN
ajlm-41	41	14	.	.	PUNCT
ajlm-41	42	1	detection	detection	NOUN
ajlm-41	42	2	of	of	ADP
ajlm-41	42	3	virulence	virulence	NOUN
ajlm-41	42	4	factors	factor	NOUN
ajlm-41	42	5	from	from	ADP
ajlm-41	42	6	environmental	environmental	ADJ
ajlm-41	42	7	and	and	CCONJ
ajlm-41	42	8	clinical	clinical	ADJ
ajlm-41	42	9	v.	v.	ADP
ajlm-41	42	10	cholerae	cholerae	PROPN
ajlm-41	42	11	archived	archive	VERB
ajlm-41	42	12	clinical	clinical	ADJ
ajlm-41	42	13	isolates	isolate	NOUN
ajlm-41	42	14	were	be	AUX
ajlm-41	42	15	sampled	sample	VERB
ajlm-41	42	16	from	from	ADP
ajlm-41	42	17	the	the	DET
ajlm-41	42	18	kenya	kenya	PROPN
ajlm-41	42	19	medical	medical	PROPN
ajlm-41	42	20	research	research	PROPN
ajlm-41	42	21	institute	institute	PROPN
ajlm-41	42	22	(	(	PUNCT
ajlm-41	42	23	kemri	kemri	PROPN
ajlm-41	42	24	)	)	PUNCT
ajlm-41	42	25	laboratory	laboratory	NOUN
ajlm-41	42	26	.	.	PUNCT
ajlm-41	43	1	these	these	DET
ajlm-41	43	2	isolates	isolate	NOUN
ajlm-41	43	3	were	be	AUX
ajlm-41	43	4	mostly	mostly	ADV
ajlm-41	43	5	from	from	ADP
ajlm-41	43	6	outbreaks	outbreak	NOUN
ajlm-41	43	7	which	which	PRON
ajlm-41	43	8	occurred	occur	VERB
ajlm-41	43	9	in	in	ADP
ajlm-41	43	10	the	the	DET
ajlm-41	43	11	years	year	NOUN
ajlm-41	43	12	2009–2010	2009–2010	NUM
ajlm-41	43	13	.	.	PUNCT
ajlm-41	44	1	systematic	systematic	ADJ
ajlm-41	44	2	random	random	ADJ
ajlm-41	44	3	sampling	sampling	NOUN
ajlm-41	44	4	was	be	AUX
ajlm-41	44	5	carried	carry	VERB
ajlm-41	44	6	out	out	ADP
ajlm-41	44	7	in	in	ADP
ajlm-41	44	8	order	order	NOUN
ajlm-41	44	9	to	to	PART
ajlm-41	44	10	choose	choose	VERB
ajlm-41	44	11	clinical	clinical	ADJ
ajlm-41	44	12	strains	strain	NOUN
ajlm-41	44	13	.	.	PUNCT
ajlm-41	45	1	from	from	ADP
ajlm-41	45	2	a	a	DET
ajlm-41	45	3	list	list	NOUN
ajlm-41	45	4	of	of	ADP
ajlm-41	45	5	whole	whole	ADJ
ajlm-41	45	6	population	population	NOUN
ajlm-41	45	7	strain	strain	NOUN
ajlm-41	45	8	numbers	number	NOUN
ajlm-41	45	9	,	,	PUNCT
ajlm-41	45	10	a	a	DET
ajlm-41	45	11	random	random	ADJ
ajlm-41	45	12	strain	strain	NOUN
ajlm-41	45	13	number	number	NOUN
ajlm-41	45	14	was	be	AUX
ajlm-41	45	15	chosen	choose	VERB
ajlm-41	45	16	as	as	ADP
ajlm-41	45	17	the	the	DET
ajlm-41	45	18	start	start	NOUN
ajlm-41	45	19	strain	strain	NOUN
ajlm-41	45	20	.	.	PUNCT
ajlm-41	46	1	thereafter	thereafter	ADV
ajlm-41	46	2	,	,	PUNCT
ajlm-41	46	3	every	every	DET
ajlm-41	46	4	third	third	ADJ
ajlm-41	46	5	strain	strain	NOUN
ajlm-41	46	6	from	from	ADP
ajlm-41	46	7	the	the	DET
ajlm-41	46	8	whole	whole	ADJ
ajlm-41	46	9	population	population	NOUN
ajlm-41	46	10	was	be	AUX
ajlm-41	46	11	sampled	sample	VERB
ajlm-41	46	12	until	until	SCONJ
ajlm-41	46	13	a	a	DET
ajlm-41	46	14	total	total	NOUN
ajlm-41	46	15	of	of	ADP
ajlm-41	46	16	50	50	NUM
ajlm-41	46	17	samples	sample	NOUN
ajlm-41	46	18	were	be	AUX
ajlm-41	46	19	chosen	choose	VERB
ajlm-41	46	20	,	,	PUNCT
ajlm-41	46	21	which	which	PRON
ajlm-41	46	22	is	be	AUX
ajlm-41	46	23	equal	equal	ADJ
ajlm-41	46	24	to	to	ADP
ajlm-41	46	25	the	the	DET
ajlm-41	46	26	number	number	NOUN
ajlm-41	46	27	of	of	ADP
ajlm-41	46	28	environmental	environmental	ADJ
ajlm-41	46	29	strains	strain	NOUN
ajlm-41	46	30	.	.	PUNCT
ajlm-41	47	1	amplification	amplification	NOUN
ajlm-41	47	2	deoxyribonucleic	deoxyribonucleic	ADJ
ajlm-41	47	3	acid	acid	NOUN
ajlm-41	47	4	(	(	PUNCT
ajlm-41	47	5	dna	dna	PROPN
ajlm-41	47	6	)	)	PUNCT
ajlm-41	47	7	was	be	AUX
ajlm-41	47	8	isolated	isolate	VERB
ajlm-41	47	9	from	from	ADP
ajlm-41	47	10	freshly	freshly	ADV
ajlm-41	47	11	-	-	PUNCT
ajlm-41	47	12	cultured	cultured	ADJ
ajlm-41	47	13	environmental	environmental	ADJ
ajlm-41	47	14	and	and	CCONJ
ajlm-41	47	15	clinical	clinical	ADJ
ajlm-41	47	16	v.	v.	ADP
ajlm-41	47	17	cholerae	cholerae	PROPN
ajlm-41	47	18	isolates	isolate	NOUN
ajlm-41	47	19	.	.	PUNCT
ajlm-41	48	1	the	the	DET
ajlm-41	48	2	protocol	protocol	NOUN
ajlm-41	48	3	was	be	AUX
ajlm-41	48	4	as	as	SCONJ
ajlm-41	48	5	follows	follow	VERB
ajlm-41	48	6	:	:	PUNCT
ajlm-41	48	7	on	on	ADP
ajlm-41	48	8	the	the	DET
ajlm-41	48	9	first	first	ADJ
ajlm-41	48	10	day	day	NOUN
ajlm-41	48	11	,	,	PUNCT
ajlm-41	48	12	bacterial	bacterial	ADJ
ajlm-41	48	13	isolates	isolate	NOUN
ajlm-41	48	14	were	be	AUX
ajlm-41	48	15	grown	grow	VERB
ajlm-41	48	16	at	at	ADP
ajlm-41	48	17	37	37	NUM
ajlm-41	48	18	 	 	SPACE
ajlm-41	48	19	°	°	NOUN
ajlm-41	48	20	c	c	NOUN
ajlm-41	48	21	overnight	overnight	ADV
ajlm-41	48	22	in	in	ADP
ajlm-41	48	23	mueller	mueller	PROPN
ajlm-41	48	24	-	-	PUNCT
ajlm-41	48	25	hinton	hinton	PROPN
ajlm-41	48	26	plates	plate	NOUN
ajlm-41	48	27	.	.	PUNCT
ajlm-41	49	1	cells	cell	NOUN
ajlm-41	49	2	were	be	AUX
ajlm-41	49	3	harvested	harvest	VERB
ajlm-41	49	4	and	and	CCONJ
ajlm-41	49	5	suspended	suspend	VERB
ajlm-41	49	6	in	in	ADP
ajlm-41	49	7	distilled	distil	VERB
ajlm-41	49	8	water	water	NOUN
ajlm-41	49	9	on	on	ADP
ajlm-41	49	10	the	the	DET
ajlm-41	49	11	second	second	ADJ
ajlm-41	49	12	day	day	NOUN
ajlm-41	49	13	.	.	PUNCT
ajlm-41	50	1	the	the	DET
ajlm-41	50	2	suspension	suspension	NOUN
ajlm-41	50	3	was	be	AUX
ajlm-41	50	4	heated	heat	VERB
ajlm-41	50	5	in	in	ADP
ajlm-41	50	6	a	a	DET
ajlm-41	50	7	water	water	NOUN
ajlm-41	50	8	bath	bath	NOUN
ajlm-41	50	9	at	at	ADP
ajlm-41	50	10	95	95	NUM
ajlm-41	50	11	°	°	ADP
ajlm-41	50	12	c	c	NOUN
ajlm-41	50	13	for	for	ADP
ajlm-41	50	14	five	five	NUM
ajlm-41	50	15	minutes	minute	NOUN
ajlm-41	50	16	to	to	PART
ajlm-41	50	17	lyse	lyse	VERB
ajlm-41	50	18	the	the	DET
ajlm-41	50	19	cells	cell	NOUN
ajlm-41	50	20	.	.	PUNCT
ajlm-41	51	1	this	this	PRON
ajlm-41	51	2	was	be	AUX
ajlm-41	51	3	then	then	ADV
ajlm-41	51	4	centrifuged	centrifuge	VERB
ajlm-41	51	5	at	at	ADP
ajlm-41	51	6	14	14	NUM
ajlm-41	51	7	 	 	SPACE
ajlm-41	51	8	000	000	NUM
ajlm-41	51	9	x	x	SYM
ajlm-41	51	10	g	g	NOUN
ajlm-41	51	11	for	for	ADP
ajlm-41	51	12	six	six	NUM
ajlm-41	51	13	minutes	minute	NOUN
ajlm-41	51	14	in	in	ADP
ajlm-41	51	15	order	order	NOUN
ajlm-41	51	16	to	to	PART
ajlm-41	51	17	remove	remove	VERB
ajlm-41	51	18	the	the	DET
ajlm-41	51	19	protein	protein	NOUN
ajlm-41	51	20	debris	debris	NOUN
ajlm-41	51	21	.	.	PUNCT
ajlm-41	52	1	a	a	DET
ajlm-41	52	2	sample	sample	NOUN
ajlm-41	52	3	supernatant	supernatant	NOUN
ajlm-41	52	4	was	be	AUX
ajlm-41	52	5	then	then	ADV
ajlm-41	52	6	stored	store	VERB
ajlm-41	52	7	at	at	ADP
ajlm-41	52	8	-20	-20	PROPN
ajlm-41	52	9	°	°	ADP
ajlm-41	52	10	c	c	NOUN
ajlm-41	52	11	for	for	ADP
ajlm-41	52	12	further	further	ADJ
ajlm-41	52	13	use	use	NOUN
ajlm-41	52	14	.	.	PUNCT
ajlm-41	53	1	polymerase	polymerase	NOUN
ajlm-41	53	2	chain	chain	NOUN
ajlm-41	53	3	reaction	reaction	NOUN
ajlm-41	53	4	(	(	PUNCT
ajlm-41	53	5	pcr	pcr	PROPN
ajlm-41	53	6	)	)	PUNCT
ajlm-41	53	7	was	be	AUX
ajlm-41	53	8	performed	perform	VERB
ajlm-41	53	9	in	in	ADP
ajlm-41	53	10	a	a	DET
ajlm-41	53	11	total	total	ADJ
ajlm-41	53	12	volume	volume	NOUN
ajlm-41	53	13	of	of	ADP
ajlm-41	53	14	32	32	NUM
ajlm-41	53	15	µl	µl	ADP
ajlm-41	53	16	containing	contain	VERB
ajlm-41	53	17	5	5	NUM
ajlm-41	53	18	µl	µl	ADP
ajlm-41	53	19	(	(	PUNCT
ajlm-41	53	20	5	5	NUM
ajlm-41	53	21	ng/µl	ng/µl	NUM
ajlm-41	53	22	)	)	PUNCT
ajlm-41	53	23	of	of	ADP
ajlm-41	53	24	dna	dna	PROPN
ajlm-41	53	25	template	template	NOUN
ajlm-41	53	26	,	,	PUNCT
ajlm-41	53	27	1.0	1.0	NUM
ajlm-41	53	28	 	 	SPACE
ajlm-41	53	29	µl	µl	ADP
ajlm-41	53	30	(	(	PUNCT
ajlm-41	53	31	0.1	0.1	NUM
ajlm-41	53	32	 	 	SPACE
ajlm-41	53	33	mm	mm	NOUN
ajlm-41	53	34	)	)	PUNCT
ajlm-41	53	35	each	each	PRON
ajlm-41	53	36	of	of	ADP
ajlm-41	53	37	forward	forward	ADV
ajlm-41	53	38	and	and	CCONJ
ajlm-41	53	39	reverse	reverse	ADJ
ajlm-41	53	40	primers	primer	NOUN
ajlm-41	53	41	,	,	PUNCT
ajlm-41	53	42	healthcare	healthcare	NOUN
ajlm-41	53	43	mastermix	mastermix	NOUN
ajlm-41	53	44	(	(	PUNCT
ajlm-41	53	45	ge	ge	PROPN
ajlm-41	53	46	healthcare	healthcare	PROPN
ajlm-41	53	47	,	,	PUNCT
ajlm-41	53	48	uk	uk	PROPN
ajlm-41	53	49	)	)	PUNCT
ajlm-41	53	50	and	and	CCONJ
ajlm-41	53	51	25	25	NUM
ajlm-41	53	52	 	 	SPACE
ajlm-41	53	53	µl	µl	ADP
ajlm-41	53	54	nuclease	nuclease	NOUN
ajlm-41	53	55	-	-	PUNCT
ajlm-41	53	56	free	free	ADJ
ajlm-41	53	57	water.all	water.all	NOUN
ajlm-41	53	58	strains	strain	NOUN
ajlm-41	53	59	were	be	AUX
ajlm-41	53	60	then	then	ADV
ajlm-41	53	61	screened	screen	VERB
ajlm-41	53	62	for	for	ADP
ajlm-41	53	63	the	the	DET
ajlm-41	53	64	presence	presence	NOUN
ajlm-41	53	65	of	of	ADP
ajlm-41	53	66	genes	gene	NOUN
ajlm-41	53	67	encoding	encode	VERB
ajlm-41	53	68	virulence	virulence	NOUN
ajlm-41	53	69	determinants	determinant	NOUN
ajlm-41	53	70	in	in	ADP
ajlm-41	53	71	v.	v.	ADP
ajlm-41	53	72	cholerae	cholerae	PROPN
ajlm-41	53	73	including	include	VERB
ajlm-41	53	74	cholera	cholera	NOUN
ajlm-41	53	75	toxin	toxin	NOUN
ajlm-41	53	76	(	(	PUNCT
ajlm-41	53	77	ctxa	ctxa	ADJ
ajlm-41	53	78	)	)	PUNCT
ajlm-41	53	79	,	,	PUNCT
ajlm-41	53	80	zonula	zonula	NOUN
ajlm-41	53	81	occludens	occluden	NOUN
ajlm-41	53	82	toxin	toxin	PROPN
ajlm-41	53	83	(	(	PUNCT
ajlm-41	53	84	zot	zot	PROPN
ajlm-41	53	85	)	)	PUNCT
ajlm-41	53	86	,	,	PUNCT
ajlm-41	53	87	accessory	accessory	NOUN
ajlm-41	53	88	cholera	cholera	NOUN
ajlm-41	53	89	enterotoxin	enterotoxin	X
ajlm-41	53	90	(	(	PUNCT
ajlm-41	53	91	ace	ace	PROPN
ajlm-41	53	92	)	)	PUNCT
ajlm-41	53	93	,	,	PUNCT
ajlm-41	53	94	haemolysin	haemolysin	NOUN
ajlm-41	53	95	(	(	PUNCT
ajlm-41	53	96	hlya	hlya	ADJ
ajlm-41	53	97	)	)	PUNCT
ajlm-41	53	98	,	,	PUNCT
ajlm-41	53	99	and	and	CCONJ
ajlm-41	53	100	nag	nag	VERB
ajlm-41	53	101	-	-	PUNCT
ajlm-41	53	102	specific	specific	ADJ
ajlm-41	53	103	heat	heat	NOUN
ajlm-41	53	104	-	-	PUNCT
ajlm-41	53	105	stable	stable	ADJ
ajlm-41	53	106	toxin	toxin	NOUN
ajlm-41	53	107	(	(	PUNCT
ajlm-41	53	108	st	st	NOUN
ajlm-41	53	109	)	)	PUNCT
ajlm-41	53	110	.	.	PUNCT
ajlm-41	54	1	detection	detection	NOUN
ajlm-41	54	2	of	of	ADP
ajlm-41	54	3	the	the	DET
ajlm-41	54	4	tcpa	tcpa	NOUN
ajlm-41	54	5	gene	gene	NOUN
ajlm-41	54	6	specific	specific	ADJ
ajlm-41	54	7	to	to	ADP
ajlm-41	54	8	the	the	DET
ajlm-41	54	9	el	el	PROPN
ajlm-41	54	10	tor	tor	PROPN
ajlm-41	54	11	and	and	CCONJ
ajlm-41	54	12	classical	classical	ADJ
ajlm-41	54	13	biotypes	biotype	NOUN
ajlm-41	54	14	was	be	AUX
ajlm-41	54	15	performed	perform	VERB
ajlm-41	54	16	using	use	VERB
ajlm-41	54	17	a	a	DET
ajlm-41	54	18	common	common	ADJ
ajlm-41	54	19	forward	forward	ADJ
ajlm-41	54	20	primer	primer	NOUN
ajlm-41	54	21	and	and	CCONJ
ajlm-41	54	22	biotype	biotype	NOUN
ajlm-41	54	23	-	-	PUNCT
ajlm-41	54	24	specific	specific	ADJ
ajlm-41	54	25	reverse	reverse	ADJ
ajlm-41	54	26	primers	primer	NOUN
ajlm-41	54	27	.	.	PUNCT
ajlm-41	55	1	similarly	similarly	ADV
ajlm-41	55	2	,	,	PUNCT
ajlm-41	55	3	two	two	NUM
ajlm-41	55	4	forward	forward	ADJ
ajlm-41	55	5	primers	primer	NOUN
ajlm-41	55	6	were	be	AUX
ajlm-41	55	7	used	use	VERB
ajlm-41	55	8	for	for	ADP
ajlm-41	55	9	the	the	DET
ajlm-41	55	10	detection	detection	NOUN
ajlm-41	55	11	of	of	ADP
ajlm-41	55	12	the	the	DET
ajlm-41	55	13	biotype	biotype	NOUN
ajlm-41	55	14	-	-	PUNCT
ajlm-41	55	15	specific	specific	ADJ
ajlm-41	55	16	haemolysin	haemolysin	NOUN
ajlm-41	55	17	gene	gene	NOUN
ajlm-41	55	18	(	(	PUNCT
ajlm-41	55	19	hyla	hyla	NOUN
ajlm-41	55	20	)	)	PUNCT
ajlm-41	55	21	.	.	PUNCT
ajlm-41	56	1	pcr	pcr	ADJ
ajlm-41	56	2	conditions	condition	NOUN
ajlm-41	56	3	and	and	CCONJ
ajlm-41	56	4	primers	primer	NOUN
ajlm-41	56	5	used	use	VERB
ajlm-41	56	6	for	for	ADP
ajlm-41	56	7	the	the	DET
ajlm-41	56	8	detection	detection	NOUN
ajlm-41	56	9	of	of	ADP
ajlm-41	56	10	tcpa	tcpa	NOUN
ajlm-41	56	11	,	,	PUNCT
ajlm-41	56	12	ompu	ompu	ADJ
ajlm-41	56	13	,	,	PUNCT
ajlm-41	56	14	tcpi	tcpi	NOUN
ajlm-41	56	15	,	,	PUNCT
ajlm-41	56	16	toxr	toxr	NOUN
ajlm-41	56	17	and	and	CCONJ
ajlm-41	56	18	hyla	hyla	ADJ
ajlm-41	56	19	genes	gene	NOUN
ajlm-41	56	20	were	be	AUX
ajlm-41	56	21	similar	similar	ADJ
ajlm-41	56	22	to	to	ADP
ajlm-41	56	23	those	those	PRON
ajlm-41	56	24	described	describe	VERB
ajlm-41	56	25	previously	previously	ADV
ajlm-41	56	26	by	by	ADP
ajlm-41	56	27	rivera	rivera	PROPN
ajlm-41	56	28	et	et	PROPN
ajlm-41	56	29	al.9	al.9	PROPN
ajlm-41	56	30	(	(	PUNCT
ajlm-41	56	31	table	table	NOUN
ajlm-41	56	32	1	1	NUM
ajlm-41	56	33	and	and	CCONJ
ajlm-41	56	34	table	table	NOUN
ajlm-41	56	35	2	2	NUM
ajlm-41	56	36	)	)	PUNCT
ajlm-41	56	37	,	,	PUNCT
ajlm-41	56	38	whilst	whilst	SCONJ
ajlm-41	56	39	detection	detection	NOUN
ajlm-41	56	40	of	of	ADP
ajlm-41	56	41	the	the	DET
ajlm-41	56	42	ctxa	ctxa	ADJ
ajlm-41	56	43	gene	gene	NOUN
ajlm-41	56	44	was	be	AUX
ajlm-41	56	45	done	do	VERB
ajlm-41	56	46	using	use	VERB
ajlm-41	56	47	primers	primer	NOUN
ajlm-41	56	48	and	and	CCONJ
ajlm-41	56	49	conditions	condition	NOUN
ajlm-41	56	50	described	describe	VERB
ajlm-41	56	51	before	before	ADV
ajlm-41	56	52	by	by	ADP
ajlm-41	56	53	fields	field	NOUN
ajlm-41	56	54	et	et	PRON
ajlm-41	56	55	al.10	al.10	ADJ
ajlm-41	56	56	all	all	DET
ajlm-41	56	57	pcr	pcr	ADJ
ajlm-41	56	58	assays	assay	NOUN
ajlm-41	56	59	were	be	AUX
ajlm-41	56	60	performed	perform	VERB
ajlm-41	56	61	using	use	VERB
ajlm-41	56	62	an	an	DET
ajlm-41	56	63	automated	automate	VERB
ajlm-41	56	64	dynax	dynax	PROPN
ajlm-41	56	65	thermal	thermal	ADJ
ajlm-41	56	66	cycler	cycler	PROPN
ajlm-41	56	67	.	.	PUNCT
ajlm-41	57	1	pcr	pcr	ADJ
ajlm-41	57	2	products	product	NOUN
ajlm-41	57	3	were	be	AUX
ajlm-41	57	4	analysed	analyse	VERB
ajlm-41	57	5	by	by	ADP
ajlm-41	57	6	electrophoresis	electrophoresis	NOUN
ajlm-41	57	7	on	on	ADP
ajlm-41	57	8	1.5	1.5	NUM
ajlm-41	57	9	%	%	NOUN
ajlm-41	57	10	agarose	agarose	NOUN
ajlm-41	57	11	gels	gel	NOUN
ajlm-41	57	12	,	,	PUNCT
ajlm-41	57	13	stained	stain	VERB
ajlm-41	57	14	with	with	ADP
ajlm-41	57	15	ethidium	ethidium	ADJ
ajlm-41	57	16	bromide	bromide	NOUN
ajlm-41	57	17	,	,	PUNCT
ajlm-41	57	18	visualised	visualise	VERB
ajlm-41	57	19	under	under	ADP
ajlm-41	57	20	uv	uv	NOUN
ajlm-41	57	21	light	light	NOUN
ajlm-41	57	22	and	and	CCONJ
ajlm-41	57	23	recorded	record	VERB
ajlm-41	57	24	with	with	ADP
ajlm-41	57	25	the	the	DET
ajlm-41	57	26	aid	aid	NOUN
ajlm-41	57	27	of	of	ADP
ajlm-41	57	28	a	a	DET
ajlm-41	57	29	gel	gel	NOUN
ajlm-41	57	30	-	-	PUNCT
ajlm-41	57	31	documentation	documentation	NOUN
ajlm-41	57	32	system	system	NOUN
ajlm-41	57	33	.	.	PUNCT
ajlm-41	58	1	table	table	NOUN
ajlm-41	58	2	1	1	NUM
ajlm-41	58	3	:	:	PUNCT
ajlm-41	58	4	primers	primer	NOUN
ajlm-41	58	5	used	use	VERB
ajlm-41	58	6	in	in	ADP
ajlm-41	58	7	the	the	DET
ajlm-41	58	8	study	study	NOUN
ajlm-41	58	9	.	.	PUNCT
ajlm-41	59	1	table	table	NOUN
ajlm-41	59	2	2	2	NUM
ajlm-41	59	3	:	:	PUNCT
ajlm-41	59	4	primers	primer	NOUN
ajlm-41	59	5	pooled	pool	VERB
ajlm-41	59	6	for	for	ADP
ajlm-41	59	7	multiplex	multiplex	PROPN
ajlm-41	59	8	pcr	pcr	PROPN
ajlm-41	59	9	analysis	analysis	NOUN
ajlm-41	59	10	.	.	PUNCT
ajlm-41	60	1	results	result	VERB
ajlm-41	60	2	top	top	ADJ
ajlm-41	60	3	↑	↑	NOUN
ajlm-41	60	4	isolation	isolation	NOUN
ajlm-41	60	5	of	of	ADP
ajlm-41	60	6	v.	v.	ADP
ajlm-41	60	7	cholerae	cholerae	PROPN
ajlm-41	60	8	from	from	ADP
ajlm-41	60	9	environmental	environmental	ADJ
ajlm-41	60	10	sources	source	NOUN
ajlm-41	60	11	the	the	DET
ajlm-41	60	12	coastal	coastal	ADJ
ajlm-41	60	13	region	region	NOUN
ajlm-41	60	14	had	have	VERB
ajlm-41	60	15	a	a	DET
ajlm-41	60	16	total	total	NOUN
ajlm-41	60	17	of	of	ADP
ajlm-41	60	18	23	23	NUM
ajlm-41	60	19	positive	positive	ADJ
ajlm-41	60	20	isolates	isolate	NOUN
ajlm-41	60	21	out	out	ADP
ajlm-41	60	22	of	of	ADP
ajlm-41	60	23	207	207	NUM
ajlm-41	60	24	collected	collect	VERB
ajlm-41	60	25	environmental	environmental	ADJ
ajlm-41	60	26	samples	sample	NOUN
ajlm-41	60	27	(	(	PUNCT
ajlm-41	60	28	11	11	NUM
ajlm-41	60	29	%	%	NOUN
ajlm-41	60	30	)	)	PUNCT
ajlm-41	60	31	(	(	PUNCT
ajlm-41	60	32	table	table	NOUN
ajlm-41	60	33	3	3	NUM
ajlm-41	60	34	)	)	PUNCT
ajlm-41	60	35	.	.	PUNCT
ajlm-41	61	1	kwale	kwale	PROPN
ajlm-41	61	2	had	have	VERB
ajlm-41	61	3	the	the	DET
ajlm-41	61	4	most	most	ADV
ajlm-41	61	5	positive	positive	ADJ
ajlm-41	61	6	isolates	isolate	NOUN
ajlm-41	61	7	,	,	PUNCT
ajlm-41	61	8	accounting	account	VERB
ajlm-41	61	9	for	for	ADP
ajlm-41	61	10	43	43	NUM
ajlm-41	61	11	%	%	NOUN
ajlm-41	61	12	of	of	ADP
ajlm-41	61	13	positive	positive	ADJ
ajlm-41	61	14	isolates	isolate	NOUN
ajlm-41	61	15	collected	collect	VERB
ajlm-41	61	16	in	in	ADP
ajlm-41	61	17	this	this	DET
ajlm-41	61	18	region	region	NOUN
ajlm-41	61	19	,	,	PUNCT
ajlm-41	61	20	followed	follow	VERB
ajlm-41	61	21	by	by	ADP
ajlm-41	61	22	kilifi	kilifi	PROPN
ajlm-41	61	23	(	(	PUNCT
ajlm-41	61	24	35	35	NUM
ajlm-41	61	25	%	%	NOUN
ajlm-41	61	26	)	)	PUNCT
ajlm-41	61	27	and	and	CCONJ
ajlm-41	61	28	mombasa	mombasa	PROPN
ajlm-41	61	29	(	(	PUNCT
ajlm-41	61	30	22	22	NUM
ajlm-41	61	31	%	%	NOUN
ajlm-41	61	32	)	)	PUNCT
ajlm-41	61	33	.	.	PUNCT
ajlm-41	62	1	no	no	DET
ajlm-41	62	2	samples	sample	NOUN
ajlm-41	62	3	collected	collect	VERB
ajlm-41	62	4	in	in	ADP
ajlm-41	62	5	malindi	malindi	PROPN
ajlm-41	62	6	had	have	VERB
ajlm-41	62	7	positive	positive	ADJ
ajlm-41	62	8	isolates	isolate	NOUN
ajlm-41	62	9	.	.	PUNCT
ajlm-41	63	1	the	the	DET
ajlm-41	63	2	western	western	ADJ
ajlm-41	63	3	region	region	NOUN
ajlm-41	63	4	had	have	VERB
ajlm-41	63	5	27	27	NUM
ajlm-41	63	6	positive	positive	ADJ
ajlm-41	63	7	isolates	isolate	NOUN
ajlm-41	63	8	out	out	ADP
ajlm-41	63	9	of	of	ADP
ajlm-41	63	10	199	199	NUM
ajlm-41	63	11	collected	collect	VERB
ajlm-41	63	12	samples	sample	NOUN
ajlm-41	63	13	(	(	PUNCT
ajlm-41	63	14	12	12	NUM
ajlm-41	63	15	%	%	NOUN
ajlm-41	63	16	)	)	PUNCT
ajlm-41	63	17	.	.	PUNCT
ajlm-41	64	1	homa	homa	PROPN
ajlm-41	64	2	bay	bay	PROPN
ajlm-41	64	3	had	have	VERB
ajlm-41	64	4	the	the	DET
ajlm-41	64	5	most	most	ADV
ajlm-41	64	6	positive	positive	ADJ
ajlm-41	64	7	isolates	isolate	NOUN
ajlm-41	64	8	,	,	PUNCT
ajlm-41	64	9	accounting	account	VERB
ajlm-41	64	10	for	for	ADP
ajlm-41	64	11	30	30	NUM
ajlm-41	64	12	%	%	NOUN
ajlm-41	64	13	of	of	ADP
ajlm-41	64	14	positive	positive	ADJ
ajlm-41	64	15	isolates	isolate	NOUN
ajlm-41	64	16	collected	collect	VERB
ajlm-41	64	17	in	in	ADP
ajlm-41	64	18	this	this	DET
ajlm-41	64	19	region	region	NOUN
ajlm-41	64	20	,	,	PUNCT
ajlm-41	64	21	followed	follow	VERB
ajlm-41	64	22	by	by	ADP
ajlm-41	64	23	kisumu	kisumu	PROPN
ajlm-41	64	24	,	,	PUNCT
ajlm-41	64	25	siaya	siaya	NOUN
ajlm-41	64	26	and	and	CCONJ
ajlm-41	64	27	rachuonyo	rachuonyo	NOUN
ajlm-41	64	28	(	(	PUNCT
ajlm-41	64	29	15	15	NUM
ajlm-41	64	30	%	%	NOUN
ajlm-41	64	31	each	each	PRON
ajlm-41	64	32	)	)	PUNCT
ajlm-41	64	33	;	;	PUNCT
ajlm-41	64	34	nandi	nandi	PROPN
ajlm-41	64	35	hills	hills	PROPN
ajlm-41	64	36	and	and	CCONJ
ajlm-41	64	37	nyando	nyando	PROPN
ajlm-41	64	38	(	(	PUNCT
ajlm-41	64	39	7	7	NUM
ajlm-41	64	40	%	%	NOUN
ajlm-41	64	41	each	each	PRON
ajlm-41	64	42	)	)	PUNCT
ajlm-41	64	43	and	and	CCONJ
ajlm-41	64	44	bondo	bondo	NOUN
ajlm-41	64	45	,	,	PUNCT
ajlm-41	64	46	vihiga	vihiga	ADJ
ajlm-41	64	47	and	and	CCONJ
ajlm-41	64	48	busia	busia	PROPN
ajlm-41	64	49	(	(	PUNCT
ajlm-41	64	50	~4	~4	NOUN
ajlm-41	64	51	%	%	NOUN
ajlm-41	64	52	each	each	PRON
ajlm-41	64	53	)	)	PUNCT
ajlm-41	64	54	.	.	PUNCT
ajlm-41	65	1	table	table	NOUN
ajlm-41	65	2	3	3	NUM
ajlm-41	65	3	:	:	PUNCT
ajlm-41	65	4	sources	source	NOUN
ajlm-41	65	5	of	of	ADP
ajlm-41	65	6	v.	v.	ADP
ajlm-41	65	7	cholerae	cholerae	PROPN
ajlm-41	65	8	samples	sample	NOUN
ajlm-41	65	9	collected	collect	VERB
ajlm-41	65	10	in	in	ADP
ajlm-41	65	11	coastal	coastal	ADJ
ajlm-41	65	12	and	and	CCONJ
ajlm-41	65	13	western	western	ADJ
ajlm-41	65	14	kenya	kenya	NOUN
ajlm-41	65	15	by	by	ADP
ajlm-41	65	16	region	region	NOUN
ajlm-41	65	17	.	.	PUNCT
ajlm-41	66	1	detection	detection	NOUN
ajlm-41	66	2	of	of	ADP
ajlm-41	66	3	virulence	virulence	NOUN
ajlm-41	66	4	genes	gene	NOUN
ajlm-41	66	5	from	from	ADP
ajlm-41	66	6	environmental	environmental	ADJ
ajlm-41	66	7	and	and	CCONJ
ajlm-41	66	8	clinical	clinical	ADJ
ajlm-41	66	9	v.	v.	ADP
ajlm-41	66	10	cholerae	cholerae	PROPN
ajlm-41	66	11	isolates	isolate	VERB
ajlm-41	66	12	all	all	DET
ajlm-41	66	13	clinical	clinical	ADJ
ajlm-41	66	14	strains	strain	NOUN
ajlm-41	66	15	(	(	PUNCT
ajlm-41	66	16	50	50	NUM
ajlm-41	66	17	of	of	ADP
ajlm-41	66	18	50	50	NUM
ajlm-41	66	19	)	)	PUNCT
ajlm-41	66	20	were	be	AUX
ajlm-41	66	21	pcr	pcr	ADJ
ajlm-41	66	22	positive	positive	ADJ
ajlm-41	66	23	for	for	ADP
ajlm-41	66	24	the	the	DET
ajlm-41	66	25	gene	gene	NOUN
ajlm-41	66	26	representing	represent	VERB
ajlm-41	66	27	the	the	DET
ajlm-41	66	28	el	el	PROPN
ajlm-41	66	29	tor	tor	NOUN
ajlm-41	66	30	fragment	fragment	NOUN
ajlm-41	66	31	for	for	ADP
ajlm-41	66	32	haemolysin	haemolysin	NOUN
ajlm-41	66	33	(	(	PUNCT
ajlm-41	66	34	hyla	hyla	NOUN
ajlm-41	66	35	)	)	PUNCT
ajlm-41	66	36	(	(	PUNCT
ajlm-41	66	37	figure	figure	NOUN
ajlm-41	66	38	2	2	NUM
ajlm-41	66	39	)	)	PUNCT
ajlm-41	66	40	,	,	PUNCT
ajlm-41	66	41	whilst	whilst	SCONJ
ajlm-41	66	42	only	only	ADV
ajlm-41	66	43	10	10	NUM
ajlm-41	66	44	%	%	NOUN
ajlm-41	66	45	(	(	PUNCT
ajlm-41	66	46	5	5	NUM
ajlm-41	66	47	of	of	ADP
ajlm-41	66	48	50	50	NUM
ajlm-41	66	49	)	)	PUNCT
ajlm-41	66	50	of	of	ADP
ajlm-41	66	51	the	the	DET
ajlm-41	66	52	environmental	environmental	ADJ
ajlm-41	66	53	strains	strain	NOUN
ajlm-41	66	54	were	be	AUX
ajlm-41	66	55	positive	positive	ADJ
ajlm-41	66	56	(	(	PUNCT
ajlm-41	66	57	table	table	NOUN
ajlm-41	66	58	4	4	NUM
ajlm-41	66	59	)	)	PUNCT
ajlm-41	66	60	.	.	PUNCT
ajlm-41	67	1	in	in	ADP
ajlm-41	67	2	addition	addition	NOUN
ajlm-41	67	3	,	,	PUNCT
ajlm-41	67	4	all	all	DET
ajlm-41	67	5	clinical	clinical	ADJ
ajlm-41	67	6	strains	strain	NOUN
ajlm-41	67	7	were	be	AUX
ajlm-41	67	8	pcr	pcr	ADJ
ajlm-41	67	9	positive	positive	ADJ
ajlm-41	67	10	for	for	ADP
ajlm-41	67	11	the	the	DET
ajlm-41	67	12	gene	gene	NOUN
ajlm-41	67	13	representing	represent	VERB
ajlm-41	67	14	the	the	DET
ajlm-41	67	15	classical	classical	ADJ
ajlm-41	67	16	fragment	fragment	NOUN
ajlm-41	67	17	for	for	ADP
ajlm-41	67	18	haemolysin	haemolysin	NOUN
ajlm-41	67	19	as	as	SCONJ
ajlm-41	67	20	compared	compare	VERB
ajlm-41	67	21	with	with	ADP
ajlm-41	67	22	13	13	NUM
ajlm-41	67	23	out	out	ADP
ajlm-41	67	24	of	of	ADP
ajlm-41	67	25	50	50	NUM
ajlm-41	67	26	(	(	PUNCT
ajlm-41	67	27	26	26	NUM
ajlm-41	67	28	%	%	NOUN
ajlm-41	67	29	)	)	PUNCT
ajlm-41	67	30	of	of	ADP
ajlm-41	67	31	the	the	DET
ajlm-41	67	32	environmental	environmental	ADJ
ajlm-41	67	33	strains	strain	NOUN
ajlm-41	67	34	.	.	PUNCT
ajlm-41	68	1	for	for	ADP
ajlm-41	68	2	environmental	environmental	ADJ
ajlm-41	68	3	v.	v.	PROPN
ajlm-41	68	4	cholerae	cholerae	PROPN
ajlm-41	68	5	strains	strain	NOUN
ajlm-41	68	6	,	,	PUNCT
ajlm-41	68	7	the	the	DET
ajlm-41	68	8	results	result	NOUN
ajlm-41	68	9	of	of	ADP
ajlm-41	68	10	the	the	DET
ajlm-41	68	11	multiplex	multiplex	PROPN
ajlm-41	68	12	pcr	pcr	PROPN
ajlm-41	68	13	yielded	yield	VERB
ajlm-41	68	14	positive	positive	ADJ
ajlm-41	68	15	results	result	NOUN
ajlm-41	68	16	for	for	ADP
ajlm-41	68	17	tcpa	tcpa	NOUN
ajlm-41	68	18	(	(	PUNCT
ajlm-41	68	19	el	el	PROPN
ajlm-41	68	20	tor	tor	PROPN
ajlm-41	68	21	)	)	PUNCT
ajlm-41	68	22	at	at	ADP
ajlm-41	68	23	12	12	NUM
ajlm-41	68	24	%	%	NOUN
ajlm-41	68	25	(	(	PUNCT
ajlm-41	68	26	6	6	NUM
ajlm-41	68	27	of	of	ADP
ajlm-41	68	28	50	50	NUM
ajlm-41	68	29	)	)	PUNCT
ajlm-41	68	30	,	,	PUNCT
ajlm-41	68	31	ctxa	ctxa	VERB
ajlm-41	68	32	at	at	ADP
ajlm-41	68	33	8	8	NUM
ajlm-41	68	34	%	%	NOUN
ajlm-41	68	35	(	(	PUNCT
ajlm-41	68	36	4	4	NUM
ajlm-41	68	37	of	of	ADP
ajlm-41	68	38	50	50	NUM
ajlm-41	68	39	)	)	PUNCT
ajlm-41	68	40	,	,	PUNCT
ajlm-41	68	41	zot	zot	PROPN
ajlm-41	68	42	at	at	ADP
ajlm-41	68	43	24	24	NUM
ajlm-41	68	44	%	%	NOUN
ajlm-41	68	45	(	(	PUNCT
ajlm-41	68	46	12	12	NUM
ajlm-41	68	47	of	of	ADP
ajlm-41	68	48	50	50	NUM
ajlm-41	68	49	)	)	PUNCT
ajlm-41	68	50	,	,	PUNCT
ajlm-41	68	51	tcpi	tcpi	NOUN
ajlm-41	68	52	at	at	ADP
ajlm-41	68	53	8	8	NUM
ajlm-41	68	54	%	%	NOUN
ajlm-41	68	55	(	(	PUNCT
ajlm-41	68	56	4	4	NUM
ajlm-41	68	57	of	of	ADP
ajlm-41	68	58	50	50	NUM
ajlm-41	68	59	)	)	PUNCT
ajlm-41	68	60	,	,	PUNCT
ajlm-41	68	61	toxr	toxr	NOUN
ajlm-41	68	62	at	at	ADP
ajlm-41	68	63	22	22	NUM
ajlm-41	68	64	%	%	NOUN
ajlm-41	68	65	(	(	PUNCT
ajlm-41	68	66	11	11	NUM
ajlm-41	68	67	of	of	ADP
ajlm-41	68	68	50	50	NUM
ajlm-41	68	69	)	)	PUNCT
ajlm-41	68	70	and	and	CCONJ
ajlm-41	68	71	ompu	ompu	VERB
ajlm-41	68	72	at	at	ADP
ajlm-41	68	73	0	0	NUM
ajlm-41	68	74	%	%	NOUN
ajlm-41	68	75	(	(	PUNCT
ajlm-41	68	76	0	0	NUM
ajlm-41	68	77	of	of	ADP
ajlm-41	68	78	50	50	NUM
ajlm-41	68	79	)	)	PUNCT
ajlm-41	68	80	in	in	ADP
ajlm-41	68	81	the	the	DET
ajlm-41	68	82	environmental	environmental	ADJ
ajlm-41	68	83	strains	strain	NOUN
ajlm-41	68	84	.	.	PUNCT
ajlm-41	69	1	all	all	DET
ajlm-41	69	2	clinical	clinical	ADJ
ajlm-41	69	3	and	and	CCONJ
ajlm-41	69	4	environmental	environmental	ADJ
ajlm-41	69	5	v.	v.	ADP
ajlm-41	69	6	cholerae	cholerae	PROPN
ajlm-41	69	7	isolates	isolate	NOUN
ajlm-41	69	8	(	(	PUNCT
ajlm-41	69	9	100	100	NUM
ajlm-41	69	10	%	%	NOUN
ajlm-41	69	11	)	)	PUNCT
ajlm-41	69	12	were	be	AUX
ajlm-41	69	13	negative	negative	ADJ
ajlm-41	69	14	for	for	ADP
ajlm-41	69	15	the	the	DET
ajlm-41	69	16	st	st	PROPN
ajlm-41	69	17	gene	gene	PROPN
ajlm-41	69	18	.	.	PUNCT
ajlm-41	70	1	figure	figure	NOUN
ajlm-41	70	2	2	2	NUM
ajlm-41	70	3	:	:	PUNCT
ajlm-41	70	4	example	example	NOUN
ajlm-41	70	5	amplification	amplification	NOUN
ajlm-41	70	6	of	of	ADP
ajlm-41	70	7	ompu	ompu	NOUN
ajlm-41	70	8	,	,	PUNCT
ajlm-41	70	9	toxr	toxr	NOUN
ajlm-41	70	10	and	and	CCONJ
ajlm-41	70	11	hyla	hyla	ADJ
ajlm-41	70	12	genes	gene	NOUN
ajlm-41	70	13	in	in	ADP
ajlm-41	70	14	clinical	clinical	ADJ
ajlm-41	70	15	vibrio	vibrio	ADJ
ajlm-41	70	16	cholera	cholera	NOUN
ajlm-41	70	17	.	.	PUNCT
ajlm-41	71	1	table	table	NOUN
ajlm-41	71	2	4	4	NUM
ajlm-41	71	3	:	:	PUNCT
ajlm-41	71	4	results	result	NOUN
ajlm-41	71	5	of	of	ADP
ajlm-41	71	6	polymerase	polymerase	NOUN
ajlm-41	71	7	chain	chain	NOUN
ajlm-41	71	8	reaction	reaction	NOUN
ajlm-41	71	9	.	.	PUNCT
ajlm-41	72	1	table	table	NOUN
ajlm-41	72	2	4	4	NUM
ajlm-41	72	3	part	part	NOUN
ajlm-41	72	4	2	2	NUM
ajlm-41	72	5	:	:	PUNCT
ajlm-41	72	6	results	result	NOUN
ajlm-41	72	7	of	of	ADP
ajlm-41	72	8	polymerase	polymerase	NOUN
ajlm-41	72	9	chain	chain	NOUN
ajlm-41	72	10	reaction	reaction	NOUN
ajlm-41	72	11	.	.	PUNCT
ajlm-41	73	1	ethical	ethical	ADJ
ajlm-41	73	2	considerations	consideration	NOUN
ajlm-41	73	3	top	top	ADJ
ajlm-41	73	4	↑	↑	PROPN
ajlm-41	73	5	ethical	ethical	ADJ
ajlm-41	73	6	approval	approval	NOUN
ajlm-41	73	7	was	be	AUX
ajlm-41	73	8	provided	provide	VERB
ajlm-41	73	9	by	by	ADP
ajlm-41	73	10	the	the	DET
ajlm-41	73	11	kenya	kenya	PROPN
ajlm-41	73	12	national	national	PROPN
ajlm-41	73	13	ethics	ethics	PROPN
ajlm-41	73	14	review	review	PROPN
ajlm-41	73	15	committee	committee	NOUN
ajlm-41	73	16	(	(	PUNCT
ajlm-41	73	17	approval	approval	NOUN
ajlm-41	73	18	number	number	NOUN
ajlm-41	73	19	kemri	kemri	PROPN
ajlm-41	73	20	/	/	SYM
ajlm-41	73	21	res/7/3/1	res/7/3/1	PROPN
ajlm-41	73	22	)	)	PUNCT
ajlm-41	73	23	.	.	PUNCT
ajlm-41	74	1	potential	potential	ADJ
ajlm-41	74	2	benefits	benefit	NOUN
ajlm-41	74	3	and	and	CCONJ
ajlm-41	74	4	hazards	hazard	NOUN
ajlm-41	74	5	there	there	PRON
ajlm-41	74	6	were	be	VERB
ajlm-41	74	7	no	no	DET
ajlm-41	74	8	potential	potential	ADJ
ajlm-41	74	9	benefits	benefit	NOUN
ajlm-41	74	10	or	or	CCONJ
ajlm-41	74	11	hazards	hazard	NOUN
ajlm-41	74	12	to	to	ADP
ajlm-41	74	13	human	human	ADJ
ajlm-41	74	14	subjects	subject	NOUN
ajlm-41	74	15	as	as	SCONJ
ajlm-41	74	16	they	they	PRON
ajlm-41	74	17	were	be	AUX
ajlm-41	74	18	not	not	PART
ajlm-41	74	19	involved	involve	VERB
ajlm-41	74	20	in	in	ADP
ajlm-41	74	21	the	the	DET
ajlm-41	74	22	study	study	NOUN
ajlm-41	74	23	.	.	PUNCT
ajlm-41	75	1	trustworthiness	trustworthiness	PROPN
ajlm-41	75	2	top	top	VERB
ajlm-41	75	3	↑	↑	NOUN
ajlm-41	75	4	reliability	reliability	NOUN
ajlm-41	75	5	reliability	reliability	NOUN
ajlm-41	75	6	is	be	AUX
ajlm-41	75	7	associated	associate	VERB
ajlm-41	75	8	with	with	ADP
ajlm-41	75	9	accuracy	accuracy	NOUN
ajlm-41	75	10	,	,	PUNCT
ajlm-41	75	11	stability	stability	NOUN
ajlm-41	75	12	,	,	PUNCT
ajlm-41	75	13	consistency	consistency	NOUN
ajlm-41	75	14	and	and	CCONJ
ajlm-41	75	15	reproducibility	reproducibility	NOUN
ajlm-41	75	16	of	of	ADP
ajlm-41	75	17	the	the	DET
ajlm-41	75	18	research	research	NOUN
ajlm-41	75	19	.	.	PUNCT
ajlm-41	76	1	this	this	PRON
ajlm-41	76	2	was	be	AUX
ajlm-41	76	3	ensured	ensure	VERB
ajlm-41	76	4	by	by	ADP
ajlm-41	76	5	peer	peer	NOUN
ajlm-41	76	6	examination	examination	NOUN
ajlm-41	76	7	and	and	CCONJ
ajlm-41	76	8	open	open	ADJ
ajlm-41	76	9	discussion	discussion	NOUN
ajlm-41	76	10	with	with	ADP
ajlm-41	76	11	all	all	DET
ajlm-41	76	12	participants	participant	NOUN
ajlm-41	76	13	.	.	PUNCT
ajlm-41	77	1	validity	validity	NOUN
ajlm-41	77	2	validity	validity	NOUN
ajlm-41	77	3	entails	entail	VERB
ajlm-41	77	4	ensuring	ensure	VERB
ajlm-41	77	5	that	that	SCONJ
ajlm-41	77	6	the	the	DET
ajlm-41	77	7	datasets	dataset	NOUN
ajlm-41	77	8	gathered	gather	VERB
ajlm-41	77	9	or	or	CCONJ
ajlm-41	77	10	items	item	NOUN
ajlm-41	77	11	used	use	VERB
ajlm-41	77	12	are	be	AUX
ajlm-41	77	13	pertinent	pertinent	ADJ
ajlm-41	77	14	or	or	CCONJ
ajlm-41	77	15	relevant	relevant	ADJ
ajlm-41	77	16	to	to	ADP
ajlm-41	77	17	the	the	DET
ajlm-41	77	18	research	research	NOUN
ajlm-41	77	19	conducted	conduct	VERB
ajlm-41	77	20	.	.	PUNCT
ajlm-41	78	1	this	this	PRON
ajlm-41	78	2	was	be	AUX
ajlm-41	78	3	ensured	ensure	VERB
ajlm-41	78	4	by	by	ADP
ajlm-41	78	5	use	use	NOUN
ajlm-41	78	6	of	of	ADP
ajlm-41	78	7	appropriate	appropriate	ADJ
ajlm-41	78	8	research	research	NOUN
ajlm-41	78	9	design	design	NOUN
ajlm-41	78	10	and	and	CCONJ
ajlm-41	78	11	methods	method	NOUN
ajlm-41	78	12	.	.	PUNCT
ajlm-41	79	1	discussion	discussion	NOUN
ajlm-41	79	2	top	top	PROPN
ajlm-41	79	3	↑	↑	NOUN
ajlm-41	79	4	isolation	isolation	NOUN
ajlm-41	79	5	of	of	ADP
ajlm-41	79	6	environmental	environmental	ADJ
ajlm-41	79	7	v.	v.	ADP
ajlm-41	79	8	cholerae	cholerae	PROPN
ajlm-41	79	9	from	from	ADP
ajlm-41	79	10	western	western	ADJ
ajlm-41	79	11	and	and	CCONJ
ajlm-41	79	12	coastal	coastal	ADJ
ajlm-41	79	13	regions	region	NOUN
ajlm-41	79	14	of	of	ADP
ajlm-41	79	15	kenya	kenya	PROPN
ajlm-41	79	16	knowledge	knowledge	NOUN
ajlm-41	79	17	regarding	regard	VERB
ajlm-41	79	18	environmental	environmental	ADJ
ajlm-41	79	19	reservoirs	reservoir	NOUN
ajlm-41	79	20	of	of	ADP
ajlm-41	79	21	v.	v.	ADP
ajlm-41	79	22	cholerae	cholerae	PROPN
ajlm-41	79	23	is	be	AUX
ajlm-41	79	24	of	of	ADP
ajlm-41	79	25	critical	critical	ADJ
ajlm-41	79	26	epidemiological	epidemiological	ADJ
ajlm-41	79	27	and	and	CCONJ
ajlm-41	79	28	public	public	ADJ
ajlm-41	79	29	health	health	NOUN
ajlm-41	79	30	importance	importance	NOUN
ajlm-41	79	31	.	.	PUNCT
ajlm-41	80	1	we	we	PRON
ajlm-41	80	2	identified	identify	VERB
ajlm-41	80	3	environmental	environmental	ADJ
ajlm-41	80	4	reservoirs	reservoir	NOUN
ajlm-41	80	5	of	of	ADP
ajlm-41	80	6	v.	v.	ADP
ajlm-41	80	7	cholera	cholera	NOUN
ajlm-41	80	8	in	in	ADP
ajlm-41	80	9	kenya	kenya	PROPN
ajlm-41	80	10	in	in	ADP
ajlm-41	80	11	a	a	DET
ajlm-41	80	12	disease	disease	NOUN
ajlm-41	80	13	climate	climate	NOUN
ajlm-41	80	14	consisting	consist	VERB
ajlm-41	80	15	of	of	ADP
ajlm-41	80	16	few	few	ADJ
ajlm-41	80	17	reported	report	VERB
ajlm-41	80	18	cases	case	NOUN
ajlm-41	80	19	.	.	PUNCT
ajlm-41	81	1	it	it	PRON
ajlm-41	81	2	is	be	AUX
ajlm-41	81	3	therefore	therefore	ADV
ajlm-41	81	4	likely	likely	ADJ
ajlm-41	81	5	that	that	SCONJ
ajlm-41	81	6	the	the	DET
ajlm-41	81	7	v.	v.	PROPN
ajlm-41	81	8	cholerae	cholerae	PROPN
ajlm-41	81	9	existing	exist	VERB
ajlm-41	81	10	in	in	ADP
ajlm-41	81	11	the	the	DET
ajlm-41	81	12	environment	environment	NOUN
ajlm-41	81	13	amplify	amplify	VERB
ajlm-41	81	14	during	during	ADP
ajlm-41	81	15	the	the	DET
ajlm-41	81	16	off	off	NOUN
ajlm-41	81	17	-	-	PUNCT
ajlm-41	81	18	season	season	NOUN
ajlm-41	81	19	to	to	PART
ajlm-41	81	20	cause	cause	VERB
ajlm-41	81	21	epidemics	epidemic	NOUN
ajlm-41	81	22	.	.	PUNCT
ajlm-41	82	1	prevalence	prevalence	NOUN
ajlm-41	82	2	of	of	ADP
ajlm-41	82	3	virulence	virulence	NOUN
ajlm-41	82	4	factors	factor	NOUN
ajlm-41	82	5	in	in	ADP
ajlm-41	82	6	environmental	environmental	ADJ
ajlm-41	82	7	and	and	CCONJ
ajlm-41	82	8	clinical	clinical	ADJ
ajlm-41	82	9	isolates	isolate	NOUN
ajlm-41	82	10	of	of	ADP
ajlm-41	82	11	v.	v.	ADP
ajlm-41	82	12	cholerae	cholerae	PROPN
ajlm-41	82	13	in	in	ADP
ajlm-41	82	14	this	this	DET
ajlm-41	82	15	study	study	NOUN
ajlm-41	82	16	,	,	PUNCT
ajlm-41	82	17	the	the	DET
ajlm-41	82	18	occurrence	occurrence	NOUN
ajlm-41	82	19	and	and	CCONJ
ajlm-41	82	20	distribution	distribution	NOUN
ajlm-41	82	21	of	of	ADP
ajlm-41	82	22	selected	select	VERB
ajlm-41	82	23	virulence	virulence	NOUN
ajlm-41	82	24	-	-	PUNCT
ajlm-41	82	25	associated	associate	VERB
ajlm-41	82	26	genes	gene	NOUN
ajlm-41	82	27	in	in	ADP
ajlm-41	82	28	environmental	environmental	ADJ
ajlm-41	82	29	and	and	CCONJ
ajlm-41	82	30	clinical	clinical	ADJ
ajlm-41	82	31	strains	strain	NOUN
ajlm-41	82	32	of	of	ADP
ajlm-41	82	33	v.	v.	ADP
ajlm-41	82	34	cholerae	cholerae	PROPN
ajlm-41	82	35	collected	collect	VERB
ajlm-41	82	36	in	in	ADP
ajlm-41	82	37	kenya	kenya	PROPN
ajlm-41	82	38	were	be	AUX
ajlm-41	82	39	demonstrated.environmental	demonstrated.environmental	PROPN
ajlm-41	82	40	studies	study	NOUN
ajlm-41	82	41	of	of	ADP
ajlm-41	82	42	v.	v.	ADP
ajlm-41	82	43	cholerae	cholerae	PROPN
ajlm-41	82	44	have	have	AUX
ajlm-41	82	45	been	be	AUX
ajlm-41	82	46	done	do	VERB
ajlm-41	82	47	with	with	ADP
ajlm-41	82	48	the	the	DET
ajlm-41	82	49	expectation	expectation	NOUN
ajlm-41	82	50	that	that	SCONJ
ajlm-41	82	51	the	the	DET
ajlm-41	82	52	v.	v.	PROPN
ajlm-41	82	53	cholerae	cholerae	PROPN
ajlm-41	82	54	strains	strain	NOUN
ajlm-41	82	55	possessing	possess	VERB
ajlm-41	82	56	the	the	DET
ajlm-41	82	57	entire	entire	ADJ
ajlm-41	82	58	complement	complement	NOUN
ajlm-41	82	59	of	of	ADP
ajlm-41	82	60	virulence	virulence	NOUN
ajlm-41	82	61	genes	gene	NOUN
ajlm-41	82	62	would	would	AUX
ajlm-41	82	63	be	be	AUX
ajlm-41	82	64	isolated	isolate	VERB
ajlm-41	82	65	.	.	PUNCT
ajlm-41	83	1	in	in	ADP
ajlm-41	83	2	this	this	DET
ajlm-41	83	3	study	study	NOUN
ajlm-41	83	4	,	,	PUNCT
ajlm-41	83	5	as	as	ADP
ajlm-41	83	6	in	in	ADP
ajlm-41	83	7	previous	previous	ADJ
ajlm-41	83	8	similar	similar	ADJ
ajlm-41	83	9	studies	study	NOUN
ajlm-41	83	10	,	,	PUNCT
ajlm-41	83	11	this	this	PRON
ajlm-41	83	12	did	do	AUX
ajlm-41	83	13	not	not	PART
ajlm-41	83	14	happen	happen	VERB
ajlm-41	83	15	.	.	PUNCT
ajlm-41	84	1	this	this	PRON
ajlm-41	84	2	can	can	AUX
ajlm-41	84	3	be	be	AUX
ajlm-41	84	4	explained	explain	VERB
ajlm-41	84	5	by	by	ADP
ajlm-41	84	6	the	the	DET
ajlm-41	84	7	fact	fact	NOUN
ajlm-41	84	8	that	that	SCONJ
ajlm-41	84	9	virulence	virulence	NOUN
ajlm-41	84	10	genes	gene	NOUN
ajlm-41	84	11	are	be	AUX
ajlm-41	84	12	dispersed	disperse	VERB
ajlm-41	84	13	amongst	amongst	ADP
ajlm-41	84	14	environmental	environmental	ADJ
ajlm-41	84	15	strains	strain	NOUN
ajlm-41	84	16	of	of	ADP
ajlm-41	84	17	v.	v.	ADP
ajlm-41	84	18	cholerae	cholerae	PROPN
ajlm-41	84	19	and	and	CCONJ
ajlm-41	84	20	may	may	AUX
ajlm-41	84	21	be	be	AUX
ajlm-41	84	22	ferried	ferry	VERB
ajlm-41	84	23	about	about	ADP
ajlm-41	84	24	in	in	ADP
ajlm-41	84	25	mobile	mobile	ADJ
ajlm-41	84	26	genetic	genetic	ADJ
ajlm-41	84	27	elements	element	NOUN
ajlm-41	84	28	.	.	PUNCT
ajlm-41	85	1	these	these	DET
ajlm-41	85	2	genotypes	genotype	NOUN
ajlm-41	85	3	of	of	ADP
ajlm-41	85	4	environmental	environmental	PROPN
ajlm-41	85	5	v.	v.	ADP
ajlm-41	85	6	cholerae	cholerae	PROPN
ajlm-41	85	7	are	be	AUX
ajlm-41	85	8	said	say	VERB
ajlm-41	85	9	to	to	PART
ajlm-41	85	10	act	act	VERB
ajlm-41	85	11	as	as	ADP
ajlm-41	85	12	reservoirs	reservoir	NOUN
ajlm-41	85	13	for	for	ADP
ajlm-41	85	14	the	the	DET
ajlm-41	85	15	virulence	virulence	NOUN
ajlm-41	85	16	factors	factor	NOUN
ajlm-41	85	17	and	and	CCONJ
ajlm-41	85	18	potential	potential	ADJ
ajlm-41	85	19	mixing	mixing	NOUN
ajlm-41	85	20	and	and	CCONJ
ajlm-41	85	21	matching	matching	NOUN
ajlm-41	85	22	leads	lead	NOUN
ajlm-41	85	23	to	to	ADP
ajlm-41	85	24	the	the	DET
ajlm-41	85	25	formation	formation	NOUN
ajlm-41	85	26	of	of	ADP
ajlm-41	85	27	new	new	ADJ
ajlm-41	85	28	pathogenic	pathogenic	ADJ
ajlm-41	85	29	strains.11	strains.11	NOUN
ajlm-41	85	30	two	two	NUM
ajlm-41	85	31	multiplex	multiplex	PROPN
ajlm-41	85	32	pcr	pcr	NOUN
ajlm-41	85	33	assays	assay	NOUN
ajlm-41	85	34	revealed	reveal	VERB
ajlm-41	85	35	that	that	SCONJ
ajlm-41	85	36	all	all	PRON
ajlm-41	85	37	of	of	ADP
ajlm-41	85	38	the	the	DET
ajlm-41	85	39	clinical	clinical	ADJ
ajlm-41	85	40	strains	strain	NOUN
ajlm-41	85	41	were	be	AUX
ajlm-41	85	42	positive	positive	ADJ
ajlm-41	85	43	for	for	ADP
ajlm-41	85	44	ctx	ctx	NOUN
ajlm-41	85	45	,	,	PUNCT
ajlm-41	85	46	zot	zot	PROPN
ajlm-41	85	47	,	,	PUNCT
ajlm-41	85	48	tcpi	tcpi	NOUN
ajlm-41	85	49	,	,	PUNCT
ajlm-41	85	50	and	and	CCONJ
ajlm-41	85	51	ace	ace	VERB
ajlm-41	85	52	,	,	PUNCT
ajlm-41	85	53	as	as	ADV
ajlm-41	85	54	well	well	ADV
ajlm-41	85	55	as	as	ADP
ajlm-41	85	56	hlya	hlya	ADJ
ajlm-41	85	57	(	(	PUNCT
ajlm-41	85	58	both	both	DET
ajlm-41	85	59	el	el	PROPN
ajlm-41	85	60	tor	tor	NOUN
ajlm-41	85	61	and	and	CCONJ
ajlm-41	85	62	classical	classical	ADJ
ajlm-41	85	63	)	)	PUNCT
ajlm-41	85	64	,	,	PUNCT
ajlm-41	85	65	ompu	ompu	NOUN
ajlm-41	85	66	and	and	CCONJ
ajlm-41	85	67	the	the	DET
ajlm-41	85	68	toxr	toxr	NOUN
ajlm-41	85	69	gene	gene	NOUN
ajlm-41	85	70	,	,	PUNCT
ajlm-41	85	71	suggesting	suggest	VERB
ajlm-41	85	72	the	the	DET
ajlm-41	85	73	presence	presence	NOUN
ajlm-41	85	74	of	of	ADP
ajlm-41	85	75	an	an	DET
ajlm-41	85	76	intact	intact	ADJ
ajlm-41	85	77	core	core	NOUN
ajlm-41	85	78	toxin	toxin	NOUN
ajlm-41	85	79	region	region	NOUN
ajlm-41	85	80	in	in	ADP
ajlm-41	85	81	all	all	DET
ajlm-41	85	82	isolates	isolate	NOUN
ajlm-41	85	83	.	.	PUNCT
ajlm-41	86	1	these	these	DET
ajlm-41	86	2	genes	gene	NOUN
ajlm-41	86	3	are	be	AUX
ajlm-41	86	4	found	find	VERB
ajlm-41	86	5	together	together	ADV
ajlm-41	86	6	and	and	CCONJ
ajlm-41	86	7	represent	represent	VERB
ajlm-41	86	8	the	the	DET
ajlm-41	86	9	genome	genome	NOUN
ajlm-41	86	10	of	of	ADP
ajlm-41	86	11	filamentous	filamentous	ADJ
ajlm-41	86	12	bacteriophage	bacteriophage	NOUN
ajlm-41	86	13	ctxφ	ctxφ	NOUN
ajlm-41	86	14	.	.	PUNCT
ajlm-41	87	1	this	this	PRON
ajlm-41	87	2	implies	imply	VERB
ajlm-41	87	3	that	that	SCONJ
ajlm-41	87	4	they	they	PRON
ajlm-41	87	5	possessed	possess	VERB
ajlm-41	87	6	a	a	DET
ajlm-41	87	7	ctxφ	ctxφ	NOUN
ajlm-41	87	8	and	and	CCONJ
ajlm-41	87	9	tcp	tcp	VERB
ajlm-41	87	10	pathogenicity	pathogenicity	NOUN
ajlm-41	87	11	island	island	NOUN
ajlm-41	87	12	.	.	PUNCT
ajlm-41	88	1	the	the	DET
ajlm-41	88	2	pilus	pilus	ADJ
ajlm-41	88	3	colonisation	colonisation	NOUN
ajlm-41	88	4	factor	factor	NOUN
ajlm-41	88	5	tcp	tcp	VERB
ajlm-41	88	6	acts	act	NOUN
ajlm-41	88	7	as	as	ADP
ajlm-41	88	8	a	a	DET
ajlm-41	88	9	receptor	receptor	NOUN
ajlm-41	88	10	for	for	ADP
ajlm-41	88	11	ctxφ	ctxφ	NOUN
ajlm-41	88	12	,	,	PUNCT
ajlm-41	88	13	which	which	PRON
ajlm-41	88	14	can	can	AUX
ajlm-41	88	15	infect	infect	VERB
ajlm-41	88	16	non	non	ADJ
ajlm-41	88	17	-	-	ADJ
ajlm-41	88	18	toxigenic	toxigenic	ADJ
ajlm-41	88	19	v.	v.	ADP
ajlm-41	88	20	cholerae	cholerae	PROPN
ajlm-41	88	21	,	,	PUNCT
ajlm-41	88	22	leading	lead	VERB
ajlm-41	88	23	to	to	ADP
ajlm-41	88	24	the	the	DET
ajlm-41	88	25	emergence	emergence	NOUN
ajlm-41	88	26	of	of	ADP
ajlm-41	88	27	new	new	ADJ
ajlm-41	88	28	toxigenic	toxigenic	ADJ
ajlm-41	88	29	strains	strain	NOUN
ajlm-41	88	30	of	of	ADP
ajlm-41	88	31	v.	v.	ADP
ajlm-41	88	32	cholerae	cholerae	PROPN
ajlm-41	88	33	.	.	PUNCT
ajlm-41	89	1	the	the	DET
ajlm-41	89	2	genes	gene	NOUN
ajlm-41	89	3	that	that	PRON
ajlm-41	89	4	encode	encode	VERB
ajlm-41	89	5	the	the	DET
ajlm-41	89	6	cholera	cholera	NOUN
ajlm-41	89	7	toxin	toxin	NOUN
ajlm-41	89	8	subunits	subunit	NOUN
ajlm-41	89	9	ctxa	ctxa	VERB
ajlm-41	89	10	and	and	CCONJ
ajlm-41	89	11	ctxb	ctxb	NOUN
ajlm-41	89	12	are	be	AUX
ajlm-41	89	13	localised	localise	VERB
ajlm-41	89	14	to	to	ADP
ajlm-41	89	15	a	a	DET
ajlm-41	89	16	ctx	ctx	NOUN
ajlm-41	89	17	genetic	genetic	ADJ
ajlm-41	89	18	element	element	NOUN
ajlm-41	89	19	which	which	PRON
ajlm-41	89	20	is	be	AUX
ajlm-41	89	21	made	make	VERB
ajlm-41	89	22	up	up	ADP
ajlm-41	89	23	of	of	ADP
ajlm-41	89	24	a	a	DET
ajlm-41	89	25	4.6	4.6	NUM
ajlm-41	89	26	kbp	kbp	PROPN
ajlm-41	89	27	central	central	ADJ
ajlm-41	89	28	core	core	NOUN
ajlm-41	89	29	region	region	NOUN
ajlm-41	89	30	and	and	CCONJ
ajlm-41	89	31	a	a	DET
ajlm-41	89	32	2.4	2.4	NUM
ajlm-41	89	33	kbp	kbp	NOUN
ajlm-41	89	34	repetitive	repetitive	ADJ
ajlm-41	89	35	sequence	sequence	NOUN
ajlm-41	89	36	known	know	VERB
ajlm-41	89	37	as	as	ADP
ajlm-41	89	38	rs2.12	rs2.12	NOUN
ajlm-41	89	39	classical	classical	ADJ
ajlm-41	89	40	strains	strain	NOUN
ajlm-41	89	41	of	of	ADP
ajlm-41	89	42	v.	v.	ADP
ajlm-41	89	43	cholerae	cholerae	PROPN
ajlm-41	89	44	 	 	SPACE
ajlm-41	89	45	o1	o1	NOUN
ajlm-41	89	46	contain	contain	VERB
ajlm-41	89	47	two	two	NUM
ajlm-41	89	48	copies	copy	NOUN
ajlm-41	89	49	of	of	ADP
ajlm-41	89	50	the	the	DET
ajlm-41	89	51	ctx	ctx	NOUN
ajlm-41	89	52	element	element	NOUN
ajlm-41	89	53	,	,	PUNCT
ajlm-41	89	54	one	one	NUM
ajlm-41	89	55	on	on	ADP
ajlm-41	89	56	each	each	DET
ajlm-41	89	57	chromosome	chromosome	NOUN
ajlm-41	89	58	.	.	PUNCT
ajlm-41	90	1	waldor	waldor	NOUN
ajlm-41	90	2	and	and	CCONJ
ajlm-41	90	3	mekalanos13	mekalanos13	NOUN
ajlm-41	90	4	were	be	AUX
ajlm-41	90	5	able	able	ADJ
ajlm-41	90	6	to	to	PART
ajlm-41	90	7	show	show	VERB
ajlm-41	90	8	that	that	DET
ajlm-41	90	9	ctx	ctx	NOUN
ajlm-41	90	10	is	be	AUX
ajlm-41	90	11	a	a	DET
ajlm-41	90	12	filamentous	filamentous	ADJ
ajlm-41	90	13	bacteriophage	bacteriophage	NOUN
ajlm-41	90	14	related	relate	VERB
ajlm-41	90	15	to	to	ADP
ajlm-41	90	16	the	the	DET
ajlm-41	90	17	m13	m13	ADJ
ajlm-41	90	18	coliphage.12	coliphage.12	PROPN
ajlm-41	90	19	faruque	faruque	NOUN
ajlm-41	90	20	,	,	PUNCT
ajlm-41	90	21	alberts	albert	NOUN
ajlm-41	90	22	and	and	CCONJ
ajlm-41	90	23	mekalanos14	mekalanos14	NOUN
ajlm-41	90	24	reported	report	VERB
ajlm-41	90	25	that	that	SCONJ
ajlm-41	90	26	an	an	DET
ajlm-41	90	27	environmental	environmental	NOUN
ajlm-41	90	28	v.	v.	ADP
ajlm-41	90	29	cholerae	cholerae	PROPN
ajlm-41	90	30	and	and	CCONJ
ajlm-41	90	31	two	two	NUM
ajlm-41	90	32	v.	v.	ADP
ajlm-41	90	33	mimicus	mimicus	ADJ
ajlm-41	90	34	strains	strain	NOUN
ajlm-41	90	35	,	,	PUNCT
ajlm-41	90	36	all	all	PRON
ajlm-41	90	37	of	of	ADP
ajlm-41	90	38	which	which	PRON
ajlm-41	90	39	lacked	lack	VERB
ajlm-41	90	40	tcp	tcp	NOUN
ajlm-41	90	41	,	,	PUNCT
ajlm-41	90	42	were	be	AUX
ajlm-41	90	43	capable	capable	ADJ
ajlm-41	90	44	of	of	ADP
ajlm-41	90	45	being	be	AUX
ajlm-41	90	46	infected	infect	VERB
ajlm-41	90	47	by	by	ADP
ajlm-41	90	48	ctxф	ctxф	PROPN
ajlm-41	90	49	.	.	PUNCT
ajlm-41	91	1	the	the	DET
ajlm-41	91	2	v.	v.	PROPN
ajlm-41	91	3	cholerae	cholerae	PROPN
ajlm-41	91	4	pathogenicity	pathogenicity	PROPN
ajlm-41	91	5	island	island	NOUN
ajlm-41	91	6	(	(	PUNCT
ajlm-41	91	7	vpi	vpi	PROPN
ajlm-41	91	8	)	)	PUNCT
ajlm-41	91	9	is	be	AUX
ajlm-41	91	10	39.5	39.5	NUM
ajlm-41	91	11	kb	kb	NOUN
ajlm-41	91	12	in	in	ADP
ajlm-41	91	13	size	size	NOUN
ajlm-41	91	14	and	and	CCONJ
ajlm-41	91	15	contains	contain	VERB
ajlm-41	91	16	genes	gene	NOUN
ajlm-41	91	17	associated	associate	VERB
ajlm-41	91	18	with	with	ADP
ajlm-41	91	19	virulence	virulence	NOUN
ajlm-41	91	20	(	(	PUNCT
ajlm-41	91	21	tcp	tcp	PROPN
ajlm-41	91	22	-	-	PUNCT
ajlm-41	91	23	acf	acf	NOUN
ajlm-41	91	24	cluster	cluster	NOUN
ajlm-41	91	25	)	)	PUNCT
ajlm-41	91	26	,	,	PUNCT
ajlm-41	91	27	the	the	DET
ajlm-41	91	28	regulation	regulation	NOUN
ajlm-41	91	29	of	of	ADP
ajlm-41	91	30	virulence	virulence	NOUN
ajlm-41	91	31	(	(	PUNCT
ajlm-41	91	32	toxt	toxt	NOUN
ajlm-41	91	33	and	and	CCONJ
ajlm-41	91	34	tcpp	tcpp	ADJ
ajlm-41	91	35	/	/	SYM
ajlm-41	91	36	h	h	NOUN
ajlm-41	91	37	)	)	PUNCT
ajlm-41	91	38	,	,	PUNCT
ajlm-41	91	39	the	the	DET
ajlm-41	91	40	regulation	regulation	NOUN
ajlm-41	91	41	of	of	ADP
ajlm-41	91	42	chemotaxis	chemotaxis	ADJ
ajlm-41	91	43	(	(	PUNCT
ajlm-41	91	44	tcpi	tcpi	NOUN
ajlm-41	91	45	or	or	CCONJ
ajlm-41	91	46	acfb	acfb	ADJ
ajlm-41	91	47	)	)	PUNCT
ajlm-41	91	48	and	and	CCONJ
ajlm-41	91	49	mobility	mobility	NOUN
ajlm-41	91	50	(	(	PUNCT
ajlm-41	91	51	int	int	NOUN
ajlm-41	91	52	and	and	CCONJ
ajlm-41	91	53	orfi).9	orfi).9	VERB
ajlm-41	91	54	the	the	DET
ajlm-41	91	55	genes	gene	NOUN
ajlm-41	91	56	encoding	encode	VERB
ajlm-41	91	57	tcp	tcp	NOUN
ajlm-41	91	58	have	have	AUX
ajlm-41	91	59	been	be	AUX
ajlm-41	91	60	suggested	suggest	VERB
ajlm-41	91	61	to	to	PART
ajlm-41	91	62	be	be	AUX
ajlm-41	91	63	part	part	NOUN
ajlm-41	91	64	of	of	ADP
ajlm-41	91	65	a	a	DET
ajlm-41	91	66	larger	large	ADJ
ajlm-41	91	67	genetic	genetic	ADJ
ajlm-41	91	68	element	element	NOUN
ajlm-41	91	69	consisting	consist	VERB
ajlm-41	91	70	of	of	ADP
ajlm-41	91	71	a	a	DET
ajlm-41	91	72	cluster	cluster	NOUN
ajlm-41	91	73	of	of	ADP
ajlm-41	91	74	genes	gene	NOUN
ajlm-41	91	75	.	.	PUNCT
ajlm-41	92	1	the	the	DET
ajlm-41	92	2	tcpa	tcpa	NOUN
ajlm-41	92	3	el	el	PROPN
ajlm-41	92	4	tor	tor	NOUN
ajlm-41	92	5	gene	gene	NOUN
ajlm-41	92	6	was	be	AUX
ajlm-41	92	7	positive	positive	ADJ
ajlm-41	92	8	in	in	ADP
ajlm-41	92	9	all	all	DET
ajlm-41	92	10	clinical	clinical	ADJ
ajlm-41	92	11	v.	v.	ADP
ajlm-41	92	12	cholerae	cholerae	PROPN
ajlm-41	92	13	isolates	isolate	NOUN
ajlm-41	92	14	and	and	CCONJ
ajlm-41	92	15	in	in	ADP
ajlm-41	92	16	12	12	NUM
ajlm-41	92	17	%	%	NOUN
ajlm-41	92	18	of	of	ADP
ajlm-41	92	19	environmental	environmental	ADJ
ajlm-41	92	20	isolates	isolate	NOUN
ajlm-41	92	21	in	in	ADP
ajlm-41	92	22	the	the	DET
ajlm-41	92	23	current	current	ADJ
ajlm-41	92	24	study	study	NOUN
ajlm-41	92	25	,	,	PUNCT
ajlm-41	92	26	and	and	CCONJ
ajlm-41	92	27	the	the	DET
ajlm-41	92	28	tcpa	tcpa	NOUN
ajlm-41	92	29	classical	classical	ADJ
ajlm-41	92	30	gene	gene	NOUN
ajlm-41	92	31	was	be	AUX
ajlm-41	92	32	negative	negative	ADJ
ajlm-41	92	33	in	in	ADP
ajlm-41	92	34	all	all	DET
ajlm-41	92	35	isolates	isolate	NOUN
ajlm-41	92	36	.	.	PUNCT
ajlm-41	93	1	harkey	harkey	PROPN
ajlm-41	93	2	et	et	PROPN
ajlm-41	93	3	al.15	al.15	PROPN
ajlm-41	93	4	suggested	suggest	VERB
ajlm-41	93	5	that	that	SCONJ
ajlm-41	93	6	regulators	regulator	NOUN
ajlm-41	93	7	such	such	ADJ
ajlm-41	93	8	as	as	ADP
ajlm-41	93	9	tcpi	tcpi	NOUN
ajlm-41	93	10	that	that	PRON
ajlm-41	93	11	act	act	VERB
ajlm-41	93	12	downstream	downstream	ADV
ajlm-41	93	13	of	of	ADP
ajlm-41	93	14	toxr	toxr	NOUN
ajlm-41	93	15	and	and	CCONJ
ajlm-41	93	16	toxt	toxt	NOUN
ajlm-41	93	17	may	may	AUX
ajlm-41	93	18	function	function	VERB
ajlm-41	93	19	to	to	ADP
ajlm-41	93	20	fine	fine	ADJ
ajlm-41	93	21	tune	tune	NOUN
ajlm-41	93	22	the	the	DET
ajlm-41	93	23	expression	expression	NOUN
ajlm-41	93	24	of	of	ADP
ajlm-41	93	25	the	the	DET
ajlm-41	93	26	tcp	tcp	ADJ
ajlm-41	93	27	virulence	virulence	NOUN
ajlm-41	93	28	determinant	determinant	ADJ
ajlm-41	93	29	throughout	throughout	ADP
ajlm-41	93	30	the	the	DET
ajlm-41	93	31	pathogenic	pathogenic	ADJ
ajlm-41	93	32	cycle	cycle	NOUN
ajlm-41	93	33	of	of	ADP
ajlm-41	93	34	v.	v.	PROPN
ajlm-41	93	35	cholerae	cholerae	PROPN
ajlm-41	93	36	.	.	PUNCT
ajlm-41	94	1	the	the	DET
ajlm-41	94	2	tcpi	tcpi	NOUN
ajlm-41	94	3	encoding	encode	VERB
ajlm-41	94	4	gene	gene	NOUN
ajlm-41	94	5	present	present	ADJ
ajlm-41	94	6	in	in	ADP
ajlm-41	94	7	8	8	NUM
ajlm-41	94	8	%	%	NOUN
ajlm-41	94	9	of	of	ADP
ajlm-41	94	10	our	our	PRON
ajlm-41	94	11	environmental	environmental	ADJ
ajlm-41	94	12	strains	strain	NOUN
ajlm-41	94	13	may	may	AUX
ajlm-41	94	14	thus	thus	ADV
ajlm-41	94	15	have	have	VERB
ajlm-41	94	16	some	some	DET
ajlm-41	94	17	other	other	ADJ
ajlm-41	94	18	physiological	physiological	ADJ
ajlm-41	94	19	functions	function	NOUN
ajlm-41	94	20	as	as	SCONJ
ajlm-41	94	21	well.16	well.16	PROPN
ajlm-41	94	22	the	the	DET
ajlm-41	94	23	outer	outer	ADJ
ajlm-41	94	24	membrane	membrane	NOUN
ajlm-41	94	25	protein	protein	NOUN
ajlm-41	94	26	,	,	PUNCT
ajlm-41	94	27	ompu	ompu	ADJ
ajlm-41	94	28	,	,	PUNCT
ajlm-41	94	29	was	be	AUX
ajlm-41	94	30	reported	report	VERB
ajlm-41	94	31	to	to	PART
ajlm-41	94	32	be	be	AUX
ajlm-41	94	33	a	a	DET
ajlm-41	94	34	potential	potential	ADJ
ajlm-41	94	35	adherence	adherence	NOUN
ajlm-41	94	36	factor	factor	NOUN
ajlm-41	94	37	for	for	ADP
ajlm-41	94	38	v.	v.	PROPN
ajlm-41	94	39	 	 	SPACE
ajlm-41	94	40	cholerae	cholerae	PROPN
ajlm-41	94	41	.	.	PUNCT
ajlm-41	95	1	in	in	ADP
ajlm-41	95	2	this	this	DET
ajlm-41	95	3	study	study	NOUN
ajlm-41	95	4	,	,	PUNCT
ajlm-41	95	5	the	the	DET
ajlm-41	95	6	gene	gene	NOUN
ajlm-41	95	7	was	be	AUX
ajlm-41	95	8	present	present	ADJ
ajlm-41	95	9	in	in	ADP
ajlm-41	95	10	all	all	PRON
ajlm-41	95	11	of	of	ADP
ajlm-41	95	12	the	the	DET
ajlm-41	95	13	v.	v.	PROPN
ajlm-41	95	14	cholerae	cholerae	PROPN
ajlm-41	95	15	strains	strain	NOUN
ajlm-41	95	16	of	of	ADP
ajlm-41	95	17	clinical	clinical	ADJ
ajlm-41	95	18	origin	origin	NOUN
ajlm-41	95	19	that	that	PRON
ajlm-41	95	20	were	be	AUX
ajlm-41	95	21	tested	test	VERB
ajlm-41	95	22	,	,	PUNCT
ajlm-41	95	23	and	and	CCONJ
ajlm-41	95	24	negative	negative	ADJ
ajlm-41	95	25	in	in	ADP
ajlm-41	95	26	v.	v.	PROPN
ajlm-41	95	27	 	 	SPACE
ajlm-41	95	28	cholerae	cholerae	NOUN
ajlm-41	95	29	strains	strain	NOUN
ajlm-41	95	30	isolated	isolate	VERB
ajlm-41	95	31	from	from	ADP
ajlm-41	95	32	the	the	DET
ajlm-41	95	33	environment	environment	NOUN
ajlm-41	95	34	.	.	PUNCT
ajlm-41	96	1	the	the	DET
ajlm-41	96	2	haemolysin	haemolysin	NOUN
ajlm-41	96	3	gene	gene	NOUN
ajlm-41	96	4	has	have	AUX
ajlm-41	96	5	been	be	AUX
ajlm-41	96	6	employed	employ	VERB
ajlm-41	96	7	to	to	PART
ajlm-41	96	8	differentiate	differentiate	VERB
ajlm-41	96	9	between	between	ADP
ajlm-41	96	10	the	the	DET
ajlm-41	96	11	two	two	NUM
ajlm-41	96	12	biotypes	biotype	NOUN
ajlm-41	96	13	of	of	ADP
ajlm-41	96	14	v.	v.	ADP
ajlm-41	96	15	cholera	cholera	NOUN
ajlm-41	96	16	 	 	SPACE
ajlm-41	96	17	o1	o1	NOUN
ajlm-41	96	18	.	.	PUNCT
ajlm-41	97	1	two	two	NUM
ajlm-41	97	2	primer	primer	NOUN
ajlm-41	97	3	sets	set	NOUN
ajlm-41	97	4	for	for	ADP
ajlm-41	97	5	the	the	DET
ajlm-41	97	6	classical	classical	ADJ
ajlm-41	97	7	and	and	CCONJ
ajlm-41	97	8	el	el	PROPN
ajlm-41	97	9	tor	tor	PROPN
ajlm-41	97	10	biotypes	biotype	NOUN
ajlm-41	97	11	were	be	AUX
ajlm-41	97	12	used	use	VERB
ajlm-41	97	13	in	in	ADP
ajlm-41	97	14	this	this	DET
ajlm-41	97	15	study	study	NOUN
ajlm-41	97	16	.	.	PUNCT
ajlm-41	98	1	the	the	DET
ajlm-41	98	2	v.	v.	PROPN
ajlm-41	98	3	cholerae	cholerae	PROPN
ajlm-41	98	4	strains	strain	NOUN
ajlm-41	98	5	of	of	ADP
ajlm-41	98	6	clinical	clinical	ADJ
ajlm-41	98	7	origin	origin	NOUN
ajlm-41	98	8	from	from	ADP
ajlm-41	98	9	both	both	DET
ajlm-41	98	10	biotypes	biotype	NOUN
ajlm-41	98	11	were	be	AUX
ajlm-41	98	12	positive	positive	ADJ
ajlm-41	98	13	for	for	ADP
ajlm-41	98	14	the	the	DET
ajlm-41	98	15	hyla	hyla	ADJ
ajlm-41	98	16	gene	gene	NOUN
ajlm-41	98	17	.	.	PUNCT
ajlm-41	99	1	environmental	environmental	ADJ
ajlm-41	99	2	isolates	isolate	NOUN
ajlm-41	99	3	were	be	AUX
ajlm-41	99	4	26	26	NUM
ajlm-41	99	5	%	%	NOUN
ajlm-41	99	6	positive	positive	ADJ
ajlm-41	99	7	for	for	ADP
ajlm-41	99	8	haemolysin	haemolysin	NOUN
ajlm-41	99	9	of	of	ADP
ajlm-41	99	10	the	the	DET
ajlm-41	99	11	classical	classical	ADJ
ajlm-41	99	12	biotype	biotype	NOUN
ajlm-41	99	13	and	and	CCONJ
ajlm-41	99	14	10	10	NUM
ajlm-41	99	15	%	%	NOUN
ajlm-41	99	16	for	for	ADP
ajlm-41	99	17	the	the	DET
ajlm-41	99	18	el	el	PROPN
ajlm-41	99	19	tor	tor	PROPN
ajlm-41	99	20	biotype	biotype	NOUN
ajlm-41	99	21	.	.	PUNCT
ajlm-41	100	1	this	this	DET
ajlm-41	100	2	phenomenon	phenomenon	NOUN
ajlm-41	100	3	of	of	ADP
ajlm-41	100	4	detecting	detect	VERB
ajlm-41	100	5	both	both	DET
ajlm-41	100	6	fragments	fragment	NOUN
ajlm-41	100	7	encoding	encode	VERB
ajlm-41	100	8	for	for	ADP
ajlm-41	100	9	hyla	hyla	NOUN
ajlm-41	100	10	specific	specific	ADJ
ajlm-41	100	11	to	to	ADP
ajlm-41	100	12	both	both	CCONJ
ajlm-41	100	13	the	the	DET
ajlm-41	100	14	classical	classical	ADJ
ajlm-41	100	15	and	and	CCONJ
ajlm-41	100	16	the	the	DET
ajlm-41	100	17	el	el	PROPN
ajlm-41	100	18	tor	tor	PROPN
ajlm-41	100	19	biotypes	biotype	NOUN
ajlm-41	100	20	in	in	ADP
ajlm-41	100	21	one	one	NUM
ajlm-41	100	22	isolate	isolate	NOUN
ajlm-41	100	23	was	be	AUX
ajlm-41	100	24	observed	observe	VERB
ajlm-41	100	25	in	in	ADP
ajlm-41	100	26	a	a	DET
ajlm-41	100	27	similar	similar	ADJ
ajlm-41	100	28	study.17	study.17	NOUN
ajlm-41	100	29	nag	nag	NOUN
ajlm-41	100	30	-	-	PUNCT
ajlm-41	100	31	st	st	NOUN
ajlm-41	100	32	in	in	ADP
ajlm-41	100	33	v.	v.	ADP
ajlm-41	100	34	cholera	cholera	NOUN
ajlm-41	100	35	 	 	SPACE
ajlm-41	100	36	o1	o1	NOUN
ajlm-41	100	37	strains	strain	NOUN
ajlm-41	100	38	that	that	PRON
ajlm-41	100	39	is	be	AUX
ajlm-41	100	40	closely	closely	ADV
ajlm-41	100	41	related	relate	VERB
ajlm-41	100	42	to	to	ADP
ajlm-41	100	43	the	the	DET
ajlm-41	100	44	heat	heat	NOUN
ajlm-41	100	45	-	-	PUNCT
ajlm-41	100	46	stable	stable	ADJ
ajlm-41	100	47	toxins	toxin	NOUN
ajlm-41	100	48	produced	produce	VERB
ajlm-41	100	49	by	by	ADP
ajlm-41	100	50	enterotoxigenic	enterotoxigenic	PROPN
ajlm-41	100	51	e.	e.	PROPN
ajlm-41	100	52	coli	coli	PROPN
ajlm-41	100	53	and	and	CCONJ
ajlm-41	100	54	other	other	ADJ
ajlm-41	100	55	enteric	enteric	ADJ
ajlm-41	100	56	pathogens	pathogen	NOUN
ajlm-41	100	57	was	be	AUX
ajlm-41	100	58	defined.18	defined.18	VERB
ajlm-41	100	59	the	the	DET
ajlm-41	100	60	heat	heat	NOUN
ajlm-41	100	61	-	-	PUNCT
ajlm-41	100	62	stable	stable	ADJ
ajlm-41	100	63	enterotoxin	enterotoxin	NOUN
ajlm-41	100	64	production	production	NOUN
ajlm-41	100	65	by	by	ADP
ajlm-41	100	66	the	the	DET
ajlm-41	100	67	st	st	PROPN
ajlm-41	100	68	genes	gene	NOUN
ajlm-41	100	69	was	be	AUX
ajlm-41	100	70	tested	test	VERB
ajlm-41	100	71	and	and	CCONJ
ajlm-41	100	72	none	none	NOUN
ajlm-41	100	73	of	of	ADP
ajlm-41	100	74	the	the	DET
ajlm-41	100	75	v.	v.	PROPN
ajlm-41	100	76	cholerae	cholerae	PROPN
ajlm-41	100	77	strains	strain	NOUN
ajlm-41	100	78	(	(	PUNCT
ajlm-41	100	79	of	of	ADP
ajlm-41	100	80	either	either	CCONJ
ajlm-41	100	81	environmental	environmental	ADJ
ajlm-41	100	82	or	or	CCONJ
ajlm-41	100	83	clinical	clinical	ADJ
ajlm-41	100	84	origin	origin	NOUN
ajlm-41	100	85	)	)	PUNCT
ajlm-41	100	86	were	be	AUX
ajlm-41	100	87	positive	positive	ADJ
ajlm-41	100	88	.	.	PUNCT
ajlm-41	101	1	the	the	DET
ajlm-41	101	2	regulation	regulation	NOUN
ajlm-41	101	3	and	and	CCONJ
ajlm-41	101	4	expression	expression	NOUN
ajlm-41	101	5	of	of	ADP
ajlm-41	101	6	genes	gene	NOUN
ajlm-41	101	7	for	for	ADP
ajlm-41	101	8	growth	growth	NOUN
ajlm-41	101	9	and	and	CCONJ
ajlm-41	101	10	survival	survival	NOUN
ajlm-41	101	11	depend	depend	VERB
ajlm-41	101	12	on	on	ADP
ajlm-41	101	13	the	the	DET
ajlm-41	101	14	regulon	regulon	NOUN
ajlm-41	101	15	toxr	toxr	NOUN
ajlm-41	101	16	,	,	PUNCT
ajlm-41	101	17	which	which	PRON
ajlm-41	101	18	is	be	AUX
ajlm-41	101	19	regulated	regulate	VERB
ajlm-41	101	20	by	by	ADP
ajlm-41	101	21	a	a	DET
ajlm-41	101	22	cascade	cascade	NOUN
ajlm-41	101	23	mechanism	mechanism	NOUN
ajlm-41	101	24	involving	involve	VERB
ajlm-41	101	25	three	three	NUM
ajlm-41	101	26	known	know	VERB
ajlm-41	101	27	components	component	NOUN
ajlm-41	101	28	:	:	PUNCT
ajlm-41	101	29	toxr	toxr	NOUN
ajlm-41	101	30	,	,	PUNCT
ajlm-41	101	31	toxs	toxs	NOUN
ajlm-41	101	32	and	and	CCONJ
ajlm-41	101	33	toxt	toxt	NOUN
ajlm-41	101	34	.	.	PUNCT
ajlm-41	102	1	toxr	toxr	NOUN
ajlm-41	102	2	,	,	PUNCT
ajlm-41	102	3	a	a	DET
ajlm-41	102	4	32	32	NUM
ajlm-41	102	5	-	-	PUNCT
ajlm-41	102	6	kda	kda	NOUN
ajlm-41	102	7	transmembrane	transmembrane	ADJ
ajlm-41	102	8	protein	protein	NOUN
ajlm-41	102	9	,	,	PUNCT
ajlm-41	102	10	is	be	AUX
ajlm-41	102	11	the	the	DET
ajlm-41	102	12	master	master	NOUN
ajlm-41	102	13	regulator	regulator	NOUN
ajlm-41	102	14	and	and	CCONJ
ajlm-41	102	15	its	its	PRON
ajlm-41	102	16	expression	expression	NOUN
ajlm-41	102	17	is	be	AUX
ajlm-41	102	18	dependent	dependent	ADJ
ajlm-41	102	19	upon	upon	SCONJ
ajlm-41	102	20	environmental	environmental	ADJ
ajlm-41	102	21	growth	growth	NOUN
ajlm-41	102	22	conditions	condition	NOUN
ajlm-41	102	23	(	(	PUNCT
ajlm-41	102	24	incubation	incubation	NOUN
ajlm-41	102	25	temperature	temperature	NOUN
ajlm-41	102	26	,	,	PUNCT
ajlm-41	102	27	ph	ph	NOUN
ajlm-41	102	28	,	,	PUNCT
ajlm-41	102	29	osmolarity	osmolarity	NOUN
ajlm-41	102	30	,	,	PUNCT
ajlm-41	102	31	bile	bile	NOUN
ajlm-41	102	32	salts	salt	NOUN
ajlm-41	102	33	,	,	PUNCT
ajlm-41	102	34	oxygen	oxygen	NOUN
ajlm-41	102	35	tension	tension	NOUN
ajlm-41	102	36	,	,	PUNCT
ajlm-41	102	37	hydrostatic	hydrostatic	ADJ
ajlm-41	102	38	pressure	pressure	NOUN
ajlm-41	102	39	and	and	CCONJ
ajlm-41	102	40	amino	amino	NOUN
ajlm-41	102	41	acid	acid	NOUN
ajlm-41	102	42	composition	composition	NOUN
ajlm-41	102	43	of	of	ADP
ajlm-41	102	44	the	the	DET
ajlm-41	102	45	medium.19	medium.19	NOUN
ajlm-41	102	46	the	the	DET
ajlm-41	102	47	toxr	toxr	NOUN
ajlm-41	102	48	gene	gene	NOUN
ajlm-41	102	49	encodes	encode	VERB
ajlm-41	102	50	a	a	DET
ajlm-41	102	51	transcriptional	transcriptional	ADJ
ajlm-41	102	52	activator	activator	NOUN
ajlm-41	102	53	controlling	control	VERB
ajlm-41	102	54	ct	ct	NUM
ajlm-41	102	55	gene	gene	NOUN
ajlm-41	102	56	expression	expression	NOUN
ajlm-41	102	57	(	(	PUNCT
ajlm-41	102	58	ctxa	ctxa	ADJ
ajlm-41	102	59	)	)	PUNCT
ajlm-41	102	60	,	,	PUNCT
ajlm-41	102	61	tcp	tcp	ADJ
ajlm-41	102	62	biogenesis	biogenesis	NOUN
ajlm-41	102	63	(	(	PUNCT
ajlm-41	102	64	tcpa	tcpa	NOUN
ajlm-41	102	65	)	)	PUNCT
ajlm-41	102	66	,	,	PUNCT
ajlm-41	102	67	outer	outer	ADJ
ajlm-41	102	68	membrane	membrane	NOUN
ajlm-41	102	69	protein	protein	NOUN
ajlm-41	102	70	expression	expression	NOUN
ajlm-41	102	71	(	(	PUNCT
ajlm-41	102	72	ompu	ompu	ADJ
ajlm-41	102	73	)	)	PUNCT
ajlm-41	102	74	,	,	PUNCT
ajlm-41	102	75	and	and	CCONJ
ajlm-41	102	76	at	at	ADV
ajlm-41	102	77	least	least	ADJ
ajlm-41	102	78	17	17	NUM
ajlm-41	102	79	distinct	distinct	ADJ
ajlm-41	102	80	genes	gene	NOUN
ajlm-41	102	81	in	in	ADP
ajlm-41	102	82	the	the	DET
ajlm-41	102	83	o139	o139	PROPN
ajlm-41	102	84	and	and	CCONJ
ajlm-41	102	85	o1	o1	NOUN
ajlm-41	102	86	strains.20	strains.20	NOUN
ajlm-41	102	87	in	in	ADP
ajlm-41	102	88	this	this	DET
ajlm-41	102	89	study	study	NOUN
ajlm-41	102	90	,	,	PUNCT
ajlm-41	102	91	the	the	DET
ajlm-41	102	92	presence	presence	NOUN
ajlm-41	102	93	of	of	ADP
ajlm-41	102	94	the	the	DET
ajlm-41	102	95	toxr	toxr	NOUN
ajlm-41	102	96	gene	gene	NOUN
ajlm-41	102	97	was	be	AUX
ajlm-41	102	98	verified	verify	VERB
ajlm-41	102	99	in	in	ADP
ajlm-41	102	100	all	all	DET
ajlm-41	102	101	v.	v.	ADP
ajlm-41	102	102	 	 	SPACE
ajlm-41	102	103	cholerae	cholerae	NOUN
ajlm-41	102	104	isolates	isolate	NOUN
ajlm-41	102	105	of	of	ADP
ajlm-41	102	106	clinical	clinical	ADJ
ajlm-41	102	107	origin	origin	NOUN
ajlm-41	102	108	and	and	CCONJ
ajlm-41	102	109	in	in	ADP
ajlm-41	102	110	24	24	NUM
ajlm-41	102	111	%	%	NOUN
ajlm-41	102	112	of	of	ADP
ajlm-41	102	113	the	the	DET
ajlm-41	102	114	environmental	environmental	ADJ
ajlm-41	102	115	isolates	isolate	NOUN
ajlm-41	102	116	.	.	PUNCT
ajlm-41	103	1	conclusion	conclusion	NOUN
ajlm-41	103	2	top	top	PROPN
ajlm-41	103	3	↑	↑	PROPN
ajlm-41	103	4	the	the	DET
ajlm-41	103	5	implications	implication	NOUN
ajlm-41	103	6	of	of	ADP
ajlm-41	103	7	finding	find	VERB
ajlm-41	103	8	v.	v.	PROPN
ajlm-41	103	9	 	 	SPACE
ajlm-41	103	10	cholerae	cholerae	PROPN
ajlm-41	103	11	in	in	ADP
ajlm-41	103	12	environmental	environmental	ADJ
ajlm-41	103	13	sources	source	NOUN
ajlm-41	103	14	with	with	ADP
ajlm-41	103	15	virulence	virulence	NOUN
ajlm-41	103	16	genes	gene	NOUN
ajlm-41	103	17	also	also	ADV
ajlm-41	103	18	found	find	VERB
ajlm-41	103	19	in	in	ADP
ajlm-41	103	20	clinical	clinical	ADJ
ajlm-41	103	21	isolates	isolate	NOUN
ajlm-41	103	22	are	be	AUX
ajlm-41	103	23	significant	significant	ADJ
ajlm-41	103	24	.	.	PUNCT
ajlm-41	104	1	the	the	DET
ajlm-41	104	2	possibility	possibility	NOUN
ajlm-41	104	3	is	be	AUX
ajlm-41	104	4	that	that	SCONJ
ajlm-41	104	5	this	this	PRON
ajlm-41	104	6	may	may	AUX
ajlm-41	104	7	lead	lead	VERB
ajlm-41	104	8	to	to	ADP
ajlm-41	104	9	an	an	DET
ajlm-41	104	10	epidemic	epidemic	NOUN
ajlm-41	104	11	strain	strain	NOUN
ajlm-41	104	12	arising	arise	VERB
ajlm-41	104	13	through	through	ADP
ajlm-41	104	14	gene	gene	NOUN
ajlm-41	104	15	transfer	transfer	NOUN
ajlm-41	104	16	that	that	PRON
ajlm-41	104	17	links	link	VERB
ajlm-41	104	18	genes	gene	NOUN
ajlm-41	104	19	that	that	PRON
ajlm-41	104	20	facilitate	facilitate	VERB
ajlm-41	104	21	transmission	transmission	NOUN
ajlm-41	104	22	in	in	ADP
ajlm-41	104	23	human	human	ADJ
ajlm-41	104	24	populations	population	NOUN
ajlm-41	104	25	,	,	PUNCT
ajlm-41	104	26	whilst	whilst	SCONJ
ajlm-41	104	27	those	those	PRON
ajlm-41	104	28	that	that	PRON
ajlm-41	104	29	foster	foster	ADJ
ajlm-41	104	30	persistence	persistence	NOUN
ajlm-41	104	31	are	be	AUX
ajlm-41	104	32	proliferating	proliferate	VERB
ajlm-41	104	33	in	in	ADP
ajlm-41	104	34	nearby	nearby	ADJ
ajlm-41	104	35	environmental	environmental	ADJ
ajlm-41	104	36	niches	niche	NOUN
ajlm-41	104	37	.	.	PUNCT
ajlm-41	105	1	gene	gene	NOUN
ajlm-41	105	2	interactions	interaction	NOUN
ajlm-41	105	3	are	be	AUX
ajlm-41	105	4	therefore	therefore	ADV
ajlm-41	105	5	important	important	ADJ
ajlm-41	105	6	to	to	ADP
ajlm-41	105	7	understanding	understand	VERB
ajlm-41	105	8	the	the	DET
ajlm-41	105	9	epidemiology	epidemiology	NOUN
ajlm-41	105	10	and	and	CCONJ
ajlm-41	105	11	persistence	persistence	NOUN
ajlm-41	105	12	of	of	ADP
ajlm-41	105	13	virulence	virulence	NOUN
ajlm-41	105	14	factors	factor	NOUN
ajlm-41	105	15	and	and	CCONJ
ajlm-41	105	16	subsequent	subsequent	ADJ
ajlm-41	105	17	epidemic	epidemic	NOUN
ajlm-41	105	18	outbreaks	outbreak	NOUN
ajlm-41	105	19	.	.	PUNCT
ajlm-41	106	1	proper	proper	ADJ
ajlm-41	106	2	hygiene	hygiene	NOUN
ajlm-41	106	3	and	and	CCONJ
ajlm-41	106	4	fish	fish	NOUN
ajlm-41	106	5	-	-	PUNCT
ajlm-41	106	6	handling	handling	NOUN
ajlm-41	106	7	techniques	technique	NOUN
ajlm-41	106	8	should	should	AUX
ajlm-41	106	9	be	be	AUX
ajlm-41	106	10	ensured	ensure	VERB
ajlm-41	106	11	to	to	PART
ajlm-41	106	12	cut	cut	VERB
ajlm-41	106	13	the	the	DET
ajlm-41	106	14	transmission	transmission	NOUN
ajlm-41	106	15	from	from	ADP
ajlm-41	106	16	environmental	environmental	ADJ
ajlm-41	106	17	sources	source	NOUN
ajlm-41	106	18	to	to	ADP
ajlm-41	106	19	humans	human	NOUN
ajlm-41	106	20	.	.	PUNCT
ajlm-41	107	1	acknowledgements	acknowledgement	NOUN
ajlm-41	107	2	top	top	PROPN
ajlm-41	107	3	↑	↑	PROPN
ajlm-41	107	4	the	the	DET
ajlm-41	107	5	authors	author	NOUN
ajlm-41	107	6	would	would	AUX
ajlm-41	107	7	wish	wish	VERB
ajlm-41	107	8	to	to	PART
ajlm-41	107	9	thank	thank	VERB
ajlm-41	107	10	the	the	DET
ajlm-41	107	11	disease	disease	NOUN
ajlm-41	107	12	surveillance	surveillance	NOUN
ajlm-41	107	13	unit	unit	NOUN
ajlm-41	107	14	of	of	ADP
ajlm-41	107	15	the	the	DET
ajlm-41	107	16	ministry	ministry	PROPN
ajlm-41	107	17	of	of	ADP
ajlm-41	107	18	public	public	ADJ
ajlm-41	107	19	health	health	NOUN
ajlm-41	107	20	and	and	CCONJ
ajlm-41	107	21	sanitation	sanitation	NOUN
ajlm-41	107	22	,	,	PUNCT
ajlm-41	107	23	kenya	kenya	NOUN
ajlm-41	107	24	for	for	ADP
ajlm-41	107	25	providing	provide	VERB
ajlm-41	107	26	information	information	NOUN
ajlm-41	107	27	on	on	ADP
ajlm-41	107	28	past	past	ADJ
ajlm-41	107	29	cholera	cholera	NOUN
ajlm-41	107	30	outbreaks	outbreak	NOUN
ajlm-41	107	31	.	.	PUNCT
ajlm-41	108	1	we	we	PRON
ajlm-41	108	2	also	also	ADV
ajlm-41	108	3	thank	thank	VERB
ajlm-41	108	4	kemri	kemri	PROPN
ajlm-41	108	5	–	–	PUNCT
ajlm-41	108	6	cmr	cmr	NOUN
ajlm-41	108	7	members	member	NOUN
ajlm-41	108	8	of	of	ADP
ajlm-41	108	9	staff	staff	NOUN
ajlm-41	108	10	for	for	ADP
ajlm-41	108	11	their	their	PRON
ajlm-41	108	12	support	support	NOUN
ajlm-41	108	13	in	in	ADP
ajlm-41	108	14	this	this	DET
ajlm-41	108	15	work	work	NOUN
ajlm-41	108	16	.	.	PUNCT
ajlm-41	109	1	conflicting	conflict	VERB
ajlm-41	109	2	interests	interest	NOUN
ajlm-41	109	3	the	the	DET
ajlm-41	109	4	authors	author	NOUN
ajlm-41	109	5	declare	declare	VERB
ajlm-41	109	6	that	that	SCONJ
ajlm-41	109	7	they	they	PRON
ajlm-41	109	8	have	have	VERB
ajlm-41	109	9	no	no	DET
ajlm-41	109	10	financial	financial	ADJ
ajlm-41	109	11	or	or	CCONJ
ajlm-41	109	12	personal	personal	ADJ
ajlm-41	109	13	relationship(s	relationship(s	NOUN
ajlm-41	109	14	)	)	PUNCT
ajlm-41	109	15	that	that	PRON
ajlm-41	109	16	may	may	AUX
ajlm-41	109	17	have	have	AUX
ajlm-41	109	18	inappropriately	inappropriately	ADV
ajlm-41	109	19	influenced	influence	VERB
ajlm-41	109	20	them	they	PRON
ajlm-41	109	21	in	in	ADP
ajlm-41	109	22	writing	write	VERB
ajlm-41	109	23	this	this	DET
ajlm-41	109	24	article	article	NOUN
ajlm-41	109	25	.	.	PUNCT
ajlm-41	110	1	authors	author	NOUN
ajlm-41	110	2	’	'	PUNCT
ajlm-41	110	3	contributions	contribution	NOUN
ajlm-41	110	4	r.k	r.k	PROPN
ajlm-41	110	5	.	.	PROPN
ajlm-41	110	6	(	(	PUNCT
ajlm-41	110	7	institute	institute	NOUN
ajlm-41	110	8	of	of	ADP
ajlm-41	110	9	tropical	tropical	ADJ
ajlm-41	110	10	medicine	medicine	NOUN
ajlm-41	110	11	and	and	CCONJ
ajlm-41	110	12	infectious	infectious	ADJ
ajlm-41	110	13	disease	disease	NOUN
ajlm-41	110	14	,	,	PUNCT
ajlm-41	110	15	jomo	jomo	PROPN
ajlm-41	110	16	kenyatta	kenyatta	PROPN
ajlm-41	110	17	university	university	PROPN
ajlm-41	110	18	of	of	ADP
ajlm-41	110	19	agriculture	agriculture	NOUN
ajlm-41	110	20	and	and	CCONJ
ajlm-41	110	21	technology	technology	NOUN
ajlm-41	111	1	[	[	X
ajlm-41	111	2	jkuat	jkuat	X
ajlm-41	111	3	]	]	X
ajlm-41	111	4	)	)	PUNCT
ajlm-41	111	5	analysed	analyse	VERB
ajlm-41	111	6	the	the	DET
ajlm-41	111	7	data	datum	NOUN
ajlm-41	111	8	and	and	CCONJ
ajlm-41	111	9	drafted	draft	VERB
ajlm-41	111	10	the	the	DET
ajlm-41	111	11	manuscript	manuscript	NOUN
ajlm-41	111	12	.	.	PUNCT
ajlm-41	112	1	s.k	s.k	PROPN
ajlm-41	112	2	.	.	PUNCT
ajlm-41	112	3	(	(	PUNCT
ajlm-41	112	4	cmr	cmr	PROPN
ajlm-41	112	5	–	–	PUNCT
ajlm-41	112	6	kemri	kemri	PROPN
ajlm-41	112	7	)	)	PUNCT
ajlm-41	112	8	,	,	PUNCT
ajlm-41	112	9	w.s	w.s	PROPN
ajlm-41	112	10	.	.	PROPN
ajlm-41	112	11	(	(	PUNCT
ajlm-41	112	12	cmr	cmr	PROPN
ajlm-41	112	13	-	-	PUNCT
ajlm-41	112	14	kemri	kemri	PROPN
ajlm-41	112	15	)	)	PUNCT
ajlm-41	112	16	and	and	CCONJ
ajlm-41	112	17	a.w.t.m	a.w.t.m	PROPN
ajlm-41	112	18	.	.	PROPN
ajlm-41	112	19	(	(	PUNCT
ajlm-41	112	20	faculty	faculty	NOUN
ajlm-41	112	21	of	of	ADP
ajlm-41	112	22	science	science	NOUN
ajlm-41	112	23	,	,	PUNCT
ajlm-41	112	24	jkuat	jkuat	PROPN
ajlm-41	112	25	)	)	PUNCT
ajlm-41	112	26	supervised	supervise	VERB
ajlm-41	112	27	the	the	DET
ajlm-41	112	28	carrying	carrying	NOUN
ajlm-41	112	29	out	out	ADP
ajlm-41	112	30	of	of	ADP
ajlm-41	112	31	this	this	DET
ajlm-41	112	32	work	work	NOUN
ajlm-41	112	33	.	.	PUNCT
ajlm-41	113	1	j.n.k	j.n.k	NOUN
ajlm-41	113	2	.	.	PUNCT
ajlm-41	114	1	(	(	PUNCT
ajlm-41	114	2	cmr	cmr	PROPN
ajlm-41	114	3	–	–	PUNCT
ajlm-41	114	4	kemri	kemri	PROPN
ajlm-41	114	5	)	)	PUNCT
ajlm-41	114	6	supervised	supervise	VERB
ajlm-41	114	7	the	the	DET
ajlm-41	114	8	laboratory	laboratory	NOUN
ajlm-41	114	9	protocols	protocol	NOUN
ajlm-41	114	10	and	and	CCONJ
ajlm-41	114	11	execution	execution	NOUN
ajlm-41	114	12	of	of	ADP
ajlm-41	114	13	experiments	experiment	NOUN
ajlm-41	114	14	.	.	PUNCT
ajlm-41	115	1	references	reference	NOUN
ajlm-41	115	2	top	top	VERB
ajlm-41	115	3	↑	↑	PROPN
ajlm-41	115	4	1.world	1.world	NUM
ajlm-41	115	5	health	health	NOUN
ajlm-41	115	6	organization	organization	NOUN
ajlm-41	115	7	.	.	PUNCT
ajlm-41	116	1	weekly	weekly	ADJ
ajlm-41	116	2	epidemiol	epidemiol	PROPN
ajlm-41	116	3	rec	rec	PROPN
ajlm-41	116	4	.	.	PUNCT
ajlm-41	117	1	2004;79:236–244.2.world	2004;79:236–244.2.world	NUM
ajlm-41	117	2	health	health	NOUN
ajlm-41	117	3	organization	organization	NOUN
ajlm-41	117	4	.	.	PUNCT
ajlm-41	118	1	global	global	ADJ
ajlm-41	118	2	task	task	PROPN
ajlm-41	118	3	force	force	NOUN
ajlm-41	118	4	on	on	ADP
ajlm-41	118	5	cholera	cholera	NOUN
ajlm-41	118	6	control	control	NOUN
ajlm-41	118	7	.	.	PUNCT
ajlm-41	119	1	cholera	cholera	NOUN
ajlm-41	119	2	country	country	PROPN
ajlm-41	119	3	profile	profile	NOUN
ajlm-41	119	4	[	[	X
ajlm-41	119	5	document	document	NOUN
ajlm-41	119	6	on	on	ADP
ajlm-41	119	7	the	the	DET
ajlm-41	119	8	internet	internet	NOUN
ajlm-41	119	9	]	]	PUNCT
ajlm-41	119	10	.	.	PUNCT
ajlm-41	120	1	[	[	X
ajlm-41	120	2	cited	cite	VERB
ajlm-41	120	3	april	april	PROPN
ajlm-41	120	4	]	]	PUNCT
ajlm-41	120	5	.	.	PUNCT
ajlm-41	121	1	available	available	ADJ
ajlm-41	121	2	from	from	ADP
ajlm-41	121	3	:	:	PUNCT
ajlm-41	121	4	http://www.who.int/cholera/countries/kenyacountryprofile2010.pdf	http://www.who.int/cholera/countries/kenyacountryprofile2010.pdf	PROPN
ajlm-41	121	5	3.nehebay	3.nehebay	NUM
ajlm-41	121	6	s.	s.	PROPN
ajlm-41	121	7	cholera	cholera	PROPN
ajlm-41	121	8	breaks	break	VERB
ajlm-41	121	9	out	out	ADP
ajlm-41	121	10	in	in	ADP
ajlm-41	121	11	kenya	kenya	PROPN
ajlm-41	121	12	's	's	PART
ajlm-41	121	13	dadaab	dadaab	ADJ
ajlm-41	121	14	refugee	refugee	NOUN
ajlm-41	121	15	camp	camp	NOUN
ajlm-41	121	16	:	:	PUNCT
ajlm-41	121	17	un	un	PROPN
ajlm-41	122	1	[	[	X
ajlm-41	122	2	page	page	NOUN
ajlm-41	122	3	on	on	ADP
ajlm-41	122	4	the	the	DET
ajlm-41	122	5	internet	internet	NOUN
ajlm-41	122	6	]	]	PUNCT
ajlm-41	122	7	.	.	PUNCT
ajlm-41	123	1	c2011	c2011	PRON
ajlm-41	124	1	[	[	X
ajlm-41	124	2	cited	cite	VERB
ajlm-41	124	3	2012	2012	NUM
ajlm-41	124	4	sep	sep	NOUN
ajlm-41	124	5	12	12	NUM
ajlm-41	124	6	]	]	PUNCT
ajlm-41	124	7	.	.	PUNCT
ajlm-41	125	1	available	available	ADJ
ajlm-41	125	2	from	from	ADP
ajlm-41	125	3	http://www.reuters.com/article/2011/11/15/ozatp-kenya-un-refugees-idafjoe7ae0dr20111115	http://www.reuters.com/article/2011/11/15/ozatp-kenya-un-refugees-idafjoe7ae0dr20111115	PROPN
ajlm-41	125	4	4.colwell	4.colwell	NUM
ajlm-41	125	5	rr	rr	PROPN
ajlm-41	125	6	,	,	PUNCT
ajlm-41	125	7	tamlin	tamlin	PROPN
ajlm-41	125	8	ml	ml	PROPN
ajlm-41	125	9	,	,	PUNCT
ajlm-41	125	10	brayton	brayton	PROPN
ajlm-41	125	11	pr	pr	NOUN
ajlm-41	125	12	,	,	PUNCT
ajlm-41	125	13	et	et	PROPN
ajlm-41	125	14	al	al	PROPN
ajlm-41	125	15	.	.	PROPN
ajlm-41	126	1	environmental	environmental	ADJ
ajlm-41	126	2	aspects	aspect	NOUN
ajlm-41	126	3	of	of	ADP
ajlm-41	126	4	vibrio	vibrio	ADJ
ajlm-41	126	5	cholerae	cholerae	NOUN
ajlm-41	126	6	in	in	ADP
ajlm-41	126	7	transmission	transmission	NOUN
ajlm-41	126	8	of	of	ADP
ajlm-41	126	9	cholera	cholera	NOUN
ajlm-41	126	10	.	.	PUNCT
ajlm-41	127	1	in	in	ADP
ajlm-41	127	2	:	:	PUNCT
ajlm-41	127	3	sack	sack	NOUN
ajlm-41	127	4	rb	rb	NOUN
ajlm-41	127	5	,	,	PUNCT
ajlm-41	127	6	zinnaka	zinnaka	PROPN
ajlm-41	127	7	y	y	PROPN
ajlm-41	127	8	,	,	PUNCT
ajlm-41	127	9	editors	editor	NOUN
ajlm-41	127	10	.	.	PUNCT
ajlm-41	128	1	advances	advance	NOUN
ajlm-41	128	2	in	in	ADP
ajlm-41	128	3	research	research	NOUN
ajlm-41	128	4	on	on	ADP
ajlm-41	128	5	cholera	cholera	NOUN
ajlm-41	128	6	and	and	CCONJ
ajlm-41	128	7	related	relate	VERB
ajlm-41	128	8	diarrhoea	diarrhoea	NOUN
ajlm-41	128	9	.	.	PUNCT
ajlm-41	129	1	7th	7th	ADJ
ajlm-41	129	2	ed	ed	NOUN
ajlm-41	129	3	.	.	PUNCT
ajlm-41	130	1	tokyo	tokyo	PROPN
ajlm-41	130	2	:	:	PUNCT
ajlm-41	131	1	ktk	ktk	PROPN
ajlm-41	131	2	scientific	scientific	PROPN
ajlm-41	131	3	publishers	publisher	NOUN
ajlm-41	131	4	,	,	PUNCT
ajlm-41	131	5	1990	1990	NUM
ajlm-41	131	6	;	;	PUNCT
ajlm-41	131	7	pp	pp	X
ajlm-41	131	8	.	.	PUNCT
ajlm-41	132	1	327–343	327–343	NUM
ajlm-41	132	2	.	.	PUNCT
ajlm-41	133	1	5.mutreja	5.mutreja	NUM
ajlm-41	133	2	a	a	NOUN
ajlm-41	133	3	,	,	PUNCT
ajlm-41	133	4	kim	kim	PROPN
ajlm-41	133	5	dw	dw	PROPN
ajlm-41	133	6	,	,	PUNCT
ajlm-41	133	7	thomson	thomson	PROPN
ajlm-41	133	8	nr	nr	PROPN
ajlm-41	133	9	,	,	PUNCT
ajlm-41	133	10	et	et	PROPN
ajlm-41	133	11	al	al	PROPN
ajlm-41	133	12	.	.	PROPN
ajlm-41	133	13	evidence	evidence	NOUN
ajlm-41	133	14	for	for	ADP
ajlm-41	133	15	several	several	ADJ
ajlm-41	133	16	waves	wave	NOUN
ajlm-41	133	17	of	of	ADP
ajlm-41	133	18	global	global	ADJ
ajlm-41	133	19	transmission	transmission	NOUN
ajlm-41	133	20	in	in	ADP
ajlm-41	133	21	the	the	DET
ajlm-41	133	22	seventh	seventh	ADJ
ajlm-41	133	23	cholera	cholera	NOUN
ajlm-41	133	24	pandemic	pandemic	ADJ
ajlm-41	133	25	.	.	PUNCT
ajlm-41	134	1	nature	nature	NOUN
ajlm-41	134	2	2011;477(7365):462–465	2011;477(7365):462–465	NUM
ajlm-41	134	3	.	.	PUNCT
ajlm-41	135	1	http://dx.doi.org/10.1038/nature10392	http://dx.doi.org/10.1038/nature10392	PROPN
ajlm-41	135	2	6.world	6.world	NUM
ajlm-41	135	3	health	health	NOUN
ajlm-41	135	4	organization	organization	NOUN
ajlm-41	135	5	.	.	PUNCT
ajlm-41	136	1	cholera	cholera	NOUN
ajlm-41	136	2	annual	annual	ADJ
ajlm-41	136	3	report	report	NOUN
ajlm-41	136	4	2011	2011	NUM
ajlm-41	136	5	.	.	PUNCT
ajlm-41	137	1	weekly	weekly	ADJ
ajlm-41	137	2	epidemiol	epidemiol	PROPN
ajlm-41	137	3	rec	rec	PROPN
ajlm-41	137	4	.	.	PROPN
ajlm-41	137	5	2012;87(31–32	2012;87(31–32	NUM
ajlm-41	137	6	)	)	PUNCT
ajlm-41	137	7	,	,	PUNCT
ajlm-41	137	8	289–304	289–304	NUM
ajlm-41	137	9	.	.	PUNCT
ajlm-41	138	1	7.mohamed	7.mohamed	NUM
ajlm-41	138	2	aa	aa	NOUN
ajlm-41	138	3	,	,	PUNCT
ajlm-41	138	4	oundo	oundo	PROPN
ajlm-41	138	5	j	j	PROPN
ajlm-41	138	6	,	,	PUNCT
ajlm-41	138	7	kariuki	kariuki	PROPN
ajlm-41	138	8	sm	sm	PROPN
ajlm-41	138	9	,	,	PUNCT
ajlm-41	138	10	et	et	PROPN
ajlm-41	138	11	al	al	PROPN
ajlm-41	138	12	.	.	PROPN
ajlm-41	139	1	molecular	molecular	ADJ
ajlm-41	139	2	epidemiology	epidemiology	NOUN
ajlm-41	139	3	of	of	ADP
ajlm-41	139	4	geographically	geographically	ADV
ajlm-41	139	5	dispersed	disperse	VERB
ajlm-41	139	6	 	 	SPACE
ajlm-41	139	7	vibrio	vibrio	ADJ
ajlm-41	139	8	cholerae	cholerae	PROPN
ajlm-41	139	9	,	,	PUNCT
ajlm-41	139	10	kenya	kenya	PROPN
ajlm-41	139	11	,	,	PUNCT
ajlm-41	139	12	january	january	PROPN
ajlm-41	139	13	2009	2009	NUM
ajlm-41	139	14	–	–	PUNCT
ajlm-41	139	15	may	may	PROPN
ajlm-41	139	16	2010	2010	NUM
ajlm-41	139	17	.	.	PUNCT
ajlm-41	140	1	emerging	emerge	VERB
ajlm-41	140	2	infectious	infectious	ADJ
ajlm-41	140	3	diseases	disease	NOUN
ajlm-41	140	4	.	.	PUNCT
ajlm-41	141	1	2012;18(6):n.p	2012;18(6):n.p	NUM
ajlm-41	141	2	..	..	PUNCT
ajlm-41	141	3	8.huq	8.huq	NUM
ajlm-41	141	4	a	a	PRON
ajlm-41	141	5	,	,	PUNCT
ajlm-41	141	6	sack	sack	NOUN
ajlm-41	141	7	rb	rb	NOUN
ajlm-41	141	8	,	,	PUNCT
ajlm-41	141	9	nizam	nizam	PROPN
ajlm-41	141	10	a	a	PROPN
ajlm-41	141	11	,	,	PUNCT
ajlm-41	141	12	et	et	PROPN
ajlm-41	141	13	al	al	PROPN
ajlm-41	141	14	.	.	PROPN
ajlm-41	142	1	critical	critical	ADJ
ajlm-41	142	2	factors	factor	NOUN
ajlm-41	142	3	influencing	influence	VERB
ajlm-41	142	4	the	the	DET
ajlm-41	142	5	occurrence	occurrence	NOUN
ajlm-41	142	6	of	of	ADP
ajlm-41	142	7	vibrio	vibrio	ADJ
ajlm-41	142	8	cholerae	cholerae	NOUN
ajlm-41	142	9	in	in	ADP
ajlm-41	142	10	the	the	DET
ajlm-41	142	11	environment	environment	NOUN
ajlm-41	142	12	of	of	ADP
ajlm-41	142	13	bangladesh	bangladesh	PROPN
ajlm-41	142	14	.	.	PUNCT
ajlm-41	143	1	appl	appl	PROPN
ajlm-41	143	2	environ	environ	PROPN
ajlm-41	143	3	microbiol	microbiol	PROPN
ajlm-41	143	4	.	.	PUNCT
ajlm-41	144	1	2005;71(8):4645–4654	2005;71(8):4645–4654	NUM
ajlm-41	144	2	.	.	PUNCT
ajlm-41	145	1	http://dx.doi.org/10.1128/aem.71.8.4645-4654.2005	http://dx.doi.org/10.1128/aem.71.8.4645-4654.2005	X
ajlm-41	146	1	9.rivera	9.rivera	NUM
ajlm-41	146	2	in	in	ADP
ajlm-41	146	3	,	,	PUNCT
ajlm-41	146	4	chun	chun	PROPN
ajlm-41	146	5	j	j	PROPN
ajlm-41	146	6	,	,	PUNCT
ajlm-41	146	7	huq	huq	PROPN
ajlm-41	146	8	a	a	PROPN
ajlm-41	146	9	,	,	PUNCT
ajlm-41	146	10	et	et	PROPN
ajlm-41	146	11	al	al	PROPN
ajlm-41	146	12	.	.	PUNCT
ajlm-41	146	13	genotypes	genotype	NOUN
ajlm-41	146	14	associated	associate	VERB
ajlm-41	146	15	with	with	ADP
ajlm-41	146	16	virulence	virulence	NOUN
ajlm-41	146	17	in	in	ADP
ajlm-41	146	18	environmental	environmental	ADJ
ajlm-41	146	19	isolates	isolate	NOUN
ajlm-41	146	20	of	of	ADP
ajlm-41	146	21	vibrio	vibrio	ADJ
ajlm-41	146	22	cholerae	cholerae	PROPN
ajlm-41	146	23	.	.	PUNCT
ajlm-41	147	1	appl	appl	PROPN
ajlm-41	147	2	environ	environ	PROPN
ajlm-41	147	3	microbiol	microbiol	PROPN
ajlm-41	147	4	.	.	PUNCT
ajlm-41	148	1	2001;67(6):2421–2429	2001;67(6):2421–2429	PROPN
ajlm-41	148	2	.	.	PUNCT
ajlm-41	148	3	http://dx.doi.org/10.1128/aem.67.6.2421-2429.2001	http://dx.doi.org/10.1128/aem.67.6.2421-2429.2001	NOUN
ajlm-41	149	1	10.fields	10.fields	NUM
ajlm-41	149	2	pi	pi	NOUN
ajlm-41	149	3	,	,	PUNCT
ajlm-41	149	4	popovic	popovic	PROPN
ajlm-41	149	5	t	t	PROPN
ajlm-41	149	6	,	,	PUNCT
ajlm-41	149	7	wachsmuth	wachsmuth	PROPN
ajlm-41	149	8	k	k	PROPN
ajlm-41	149	9	,	,	PUNCT
ajlm-41	149	10	et	et	PROPN
ajlm-41	149	11	al	al	PROPN
ajlm-41	149	12	.	.	PUNCT
ajlm-41	149	13	use	use	NOUN
ajlm-41	149	14	of	of	ADP
ajlm-41	149	15	polymerase	polymerase	NOUN
ajlm-41	149	16	chain	chain	NOUN
ajlm-41	149	17	reaction	reaction	NOUN
ajlm-41	149	18	for	for	ADP
ajlm-41	149	19	detection	detection	NOUN
ajlm-41	149	20	of	of	ADP
ajlm-41	149	21	toxigenic	toxigenic	ADJ
ajlm-41	149	22	vibrio	vibrio	ADJ
ajlm-41	149	23	cholerae	cholerae	PROPN
ajlm-41	149	24	o1	o1	PROPN
ajlm-41	149	25	strains	strain	VERB
ajlm-41	149	26	from	from	ADP
ajlm-41	149	27	the	the	DET
ajlm-41	149	28	latin	latin	ADJ
ajlm-41	149	29	american	american	PROPN
ajlm-41	149	30	cholera	cholera	NOUN
ajlm-41	149	31	epidemic	epidemic	NOUN
ajlm-41	149	32	.	.	PUNCT
ajlm-41	150	1	j	j	PROPN
ajlm-41	150	2	clin	clin	PROPN
ajlm-41	150	3	microbiol	microbiol	PROPN
ajlm-41	150	4	.	.	PUNCT
ajlm-41	151	1	1992;30(8):2118–2121	1992;30(8):2118–2121	NUM
ajlm-41	151	2	.	.	PUNCT
ajlm-41	152	1	11.karaolis	11.karaolis	NUM
ajlm-41	152	2	dkr	dkr	NOUN
ajlm-41	152	3	.	.	PUNCT
ajlm-41	153	1	a	a	DET
ajlm-41	153	2	vibrio	vibrio	ADJ
ajlm-41	153	3	cholerae	cholerae	NOUN
ajlm-41	153	4	pathogenicity	pathogenicity	PROPN
ajlm-41	153	5	island	island	NOUN
ajlm-41	153	6	associated	associate	VERB
ajlm-41	153	7	with	with	ADP
ajlm-41	153	8	epidemic	epidemic	NOUN
ajlm-41	153	9	and	and	CCONJ
ajlm-41	153	10	pandemic	pandemic	ADJ
ajlm-41	153	11	strains	strain	NOUN
ajlm-41	153	12	.	.	PUNCT
ajlm-41	154	1	proc	proc	PROPN
ajlm-41	154	2	natl	natl	PROPN
ajlm-41	154	3	acad	acad	PROPN
ajlm-41	154	4	sci	sci	PROPN
ajlm-41	154	5	u	u	PROPN
ajlm-41	154	6	s	s	NOUN
ajlm-41	154	7	a.	a.	NOUN
ajlm-41	154	8	1998;95(6):3134–3139	1998;95(6):3134–3139	NUM
ajlm-41	154	9	.	.	PUNCT
ajlm-41	155	1	http://dx.doi.org/10.1073/pnas.95.6.3134	http://dx.doi.org/10.1073/pnas.95.6.3134	PROPN
ajlm-41	156	1	12.garg	12.garg	NUM
ajlm-41	156	2	p	p	X
ajlm-41	156	3	,	,	PUNCT
ajlm-41	156	4	nandy	nandy	PROPN
ajlm-41	156	5	rk	rk	NOUN
ajlm-41	156	6	,	,	PUNCT
ajlm-41	156	7	chaudhury	chaudhury	NOUN
ajlm-41	156	8	p	p	X
ajlm-41	156	9	,	,	PUNCT
ajlm-41	156	10	et	et	PROPN
ajlm-41	156	11	al	al	PROPN
ajlm-41	156	12	.	.	PROPN
ajlm-41	157	1	emergence	emergence	PROPN
ajlm-41	157	2	of	of	ADP
ajlm-41	157	3	vibrio	vibrio	ADJ
ajlm-41	157	4	cholerae	cholerae	PROPN
ajlm-41	157	5	o1	o1	PROPN
ajlm-41	157	6	biotype	biotype	NOUN
ajlm-41	157	7	el	el	PROPN
ajlm-41	157	8	tor	tor	PROPN
ajlm-41	157	9	serotype	serotype	PROPN
ajlm-41	157	10	inaba	inaba	PROPN
ajlm-41	157	11	from	from	ADP
ajlm-41	157	12	the	the	DET
ajlm-41	157	13	prevailing	prevail	VERB
ajlm-41	157	14	o1	o1	NOUN
ajlm-41	157	15	ogawa	ogawa	PROPN
ajlm-41	157	16	serotype	serotype	NOUN
ajlm-41	157	17	strains	strain	NOUN
ajlm-41	157	18	in	in	ADP
ajlm-41	157	19	india	india	PROPN
ajlm-41	157	20	.	.	PUNCT
ajlm-41	158	1	j	j	PROPN
ajlm-41	158	2	clin	clin	PROPN
ajlm-41	158	3	microbiol	microbiol	PROPN
ajlm-41	158	4	.	.	PUNCT
ajlm-41	159	1	2000;38(11):4249–4253	2000;38(11):4249–4253	NUM
ajlm-41	159	2	.	.	PUNCT
ajlm-41	160	1	13.waldor	13.waldor	NUM
ajlm-41	160	2	mk	mk	PROPN
ajlm-41	160	3	,	,	PUNCT
ajlm-41	160	4	mekalanos	mekalanos	PROPN
ajlm-41	160	5	jj	jj	PROPN
ajlm-41	160	6	.	.	PROPN
ajlm-41	160	7	lysogenic	lysogenic	ADJ
ajlm-41	160	8	conversion	conversion	NOUN
ajlm-41	160	9	by	by	ADP
ajlm-41	160	10	a	a	DET
ajlm-41	160	11	filamentous	filamentous	ADJ
ajlm-41	160	12	phage	phage	NOUN
ajlm-41	160	13	encoding	encode	VERB
ajlm-41	160	14	cholera	cholera	NOUN
ajlm-41	160	15	toxin	toxin	NOUN
ajlm-41	160	16	.	.	PUNCT
ajlm-41	161	1	science	science	NOUN
ajlm-41	161	2	.	.	PUNCT
ajlm-41	162	1	1996;272:1910–1914	1996;272:1910–1914	PROPN
ajlm-41	162	2	.	.	PUNCT
ajlm-41	163	1	http://dx.doi.org/10.1126/science.272.5270.1910	http://dx.doi.org/10.1126/science.272.5270.1910	PROPN
ajlm-41	163	2	14.faruque	14.faruque	NUM
ajlm-41	163	3	sm	sm	PROPN
ajlm-41	163	4	,	,	PUNCT
ajlm-41	163	5	albert	albert	PROPN
ajlm-41	163	6	mj	mj	PROPN
ajlm-41	163	7	and	and	CCONJ
ajlm-41	163	8	mekalanos	mekalano	NOUN
ajlm-41	163	9	jj	jj	PROPN
ajlm-41	163	10	.	.	PROPN
ajlm-41	163	11	epidemiology	epidemiology	NOUN
ajlm-41	163	12	,	,	PUNCT
ajlm-41	163	13	genetics	genetic	NOUN
ajlm-41	163	14	and	and	CCONJ
ajlm-41	163	15	ecology	ecology	NOUN
ajlm-41	163	16	of	of	ADP
ajlm-41	163	17	toxigenic	toxigenic	ADJ
ajlm-41	163	18	vibrio	vibrio	ADJ
ajlm-41	163	19	cholerae	cholerae	PROPN
ajlm-41	163	20	.	.	PUNCT
ajlm-41	164	1	microbiol	microbiol	PROPN
ajlm-41	164	2	mol	mol	ADP
ajlm-41	164	3	biol	biol	PROPN
ajlm-41	164	4	rev	rev	PROPN
ajlm-41	164	5	.	.	PUNCT
ajlm-41	165	1	1998;62:1301–1314	1998;62:1301–1314	NOUN
ajlm-41	165	2	.	.	PUNCT
ajlm-41	166	1	15.harkey	15.harkey	NUM
ajlm-41	167	1	cw	cw	NOUN
ajlm-41	167	2	,	,	PUNCT
ajlm-41	167	3	everiss	everiss	PROPN
ajlm-41	167	4	kd	kd	PROPN
ajlm-41	167	5	,	,	PUNCT
ajlm-41	167	6	peterson	peterson	PROPN
ajlm-41	167	7	km	km	PROPN
ajlm-41	167	8	.	.	PUNCT
ajlm-41	168	1	the	the	DET
ajlm-41	168	2	vibrio	vibrio	ADJ
ajlm-41	168	3	cholerae	cholerae	PROPN
ajlm-41	168	4	toxin	toxin	NOUN
ajlm-41	168	5	-	-	PUNCT
ajlm-41	168	6	coregulated	coregulate	VERB
ajlm-41	168	7	-	-	PUNCT
ajlm-41	168	8	pilus	pilus	NOUN
ajlm-41	168	9	gene	gene	NOUN
ajlm-41	168	10	tcpi	tcpi	NOUN
ajlm-41	168	11	encodes	encode	VERB
ajlm-41	168	12	a	a	DET
ajlm-41	168	13	homolog	homolog	NOUN
ajlm-41	168	14	of	of	ADP
ajlm-41	168	15	methyl	methyl	NOUN
ajlm-41	168	16	-	-	PUNCT
ajlm-41	168	17	accepting	accept	VERB
ajlm-41	168	18	chemotaxis	chemotaxis	ADJ
ajlm-41	168	19	proteins	protein	NOUN
ajlm-41	168	20	.	.	PUNCT
ajlm-41	169	1	infect	infect	PROPN
ajlm-41	169	2	immun	immun	PROPN
ajlm-41	169	3	.	.	PUNCT
ajlm-41	170	1	1994;62(7):2669–2678	1994;62(7):2669–2678	PROPN
ajlm-41	170	2	.	.	PUNCT
ajlm-41	171	1	16.chakraborty	16.chakraborty	NUM
ajlm-41	171	2	s	s	PROPN
ajlm-41	171	3	,	,	PUNCT
ajlm-41	171	4	mukhopadhyay	mukhopadhyay	PROPN
ajlm-41	171	5	ak	ak	PROPN
ajlm-41	171	6	,	,	PUNCT
ajlm-41	171	7	bhadra	bhadra	PROPN
ajlm-41	171	8	rk	rk	PRON
ajlm-41	171	9	,	,	PUNCT
ajlm-41	171	10	et	et	PROPN
ajlm-41	171	11	al	al	PROPN
ajlm-41	171	12	.	.	PUNCT
ajlm-41	171	13	virulence	virulence	NOUN
ajlm-41	171	14	genes	gene	NOUN
ajlm-41	171	15	in	in	ADP
ajlm-41	171	16	environmental	environmental	ADJ
ajlm-41	171	17	strains	strain	NOUN
ajlm-41	171	18	of	of	ADP
ajlm-41	171	19	vibrio	vibrio	ADJ
ajlm-41	171	20	cholerae	cholerae	PROPN
ajlm-41	171	21	.	.	PUNCT
ajlm-41	172	1	appl	appl	PROPN
ajlm-41	172	2	environ	environ	PROPN
ajlm-41	172	3	microbiol	microbiol	PROPN
ajlm-41	172	4	.	.	PUNCT
ajlm-41	173	1	2000:66(9):4022–4028	2000:66(9):4022–4028	NUM
ajlm-41	173	2	.	.	PUNCT
ajlm-41	173	3	http://dx.doi.org/10.1128/aem.66.9.4022-4028.2000	http://dx.doi.org/10.1128/aem.66.9.4022-4028.2000	X
ajlm-41	174	1	17.singh	17.singh	NUM
ajlm-41	174	2	dv	dv	PROPN
ajlm-41	174	3	,	,	PUNCT
ajlm-41	174	4	matte	matte	PROPN
ajlm-41	174	5	mh	mh	PROPN
ajlm-41	174	6	,	,	PUNCT
ajlm-41	174	7	matte	matte	NOUN
ajlm-41	174	8	gr	gr	PROPN
ajlm-41	174	9	,	,	PUNCT
ajlm-41	174	10	et	et	PROPN
ajlm-41	174	11	al	al	PROPN
ajlm-41	174	12	.	.	PUNCT
ajlm-41	175	1	molecular	molecular	ADJ
ajlm-41	175	2	analysis	analysis	NOUN
ajlm-41	175	3	of	of	ADP
ajlm-41	175	4	vibrio	vibrio	ADJ
ajlm-41	175	5	cholerae	cholerae	PROPN
ajlm-41	175	6	o1	o1	PROPN
ajlm-41	175	7	,	,	PUNCT
ajlm-41	175	8	o139	o139	NUM
ajlm-41	175	9	,	,	PUNCT
ajlm-41	175	10	non	non	ADJ
ajlm-41	175	11	-	-	NOUN
ajlm-41	175	12	o1	o1	ADJ
ajlm-41	175	13	,	,	PUNCT
ajlm-41	175	14	and	and	CCONJ
ajlm-41	175	15	non	non	ADJ
ajlm-41	175	16	-	-	ADJ
ajlm-41	175	17	o139	o139	ADJ
ajlm-41	175	18	strains	strain	NOUN
ajlm-41	175	19	:	:	PUNCT
ajlm-41	175	20	clonal	clonal	ADJ
ajlm-41	175	21	relationships	relationship	NOUN
ajlm-41	175	22	between	between	ADP
ajlm-41	175	23	clinical	clinical	ADJ
ajlm-41	175	24	and	and	CCONJ
ajlm-41	175	25	environmental	environmental	ADJ
ajlm-41	175	26	isolates	isolate	NOUN
ajlm-41	175	27	.	.	PUNCT
ajlm-41	176	1	appl	appl	PROPN
ajlm-41	176	2	environ	environ	X
ajlm-41	176	3	microbiol	microbiol	PROPN
ajlm-41	176	4	.	.	PUNCT
ajlm-41	177	1	2001;67(2):910–921	2001;67(2):910–921	NUM
ajlm-41	177	2	.	.	PUNCT
ajlm-41	177	3	http://dx.doi.org/10.1128/aem.67.2.910-921.2001	http://dx.doi.org/10.1128/aem.67.2.910-921.2001	PART
ajlm-41	177	4	18.arita	18.arita	PROPN
ajlm-41	177	5	mt	mt	PROPN
ajlm-41	177	6	,	,	PUNCT
ajlm-41	177	7	honda	honda	PROPN
ajlm-41	177	8	t	t	PROPN
ajlm-41	177	9	,	,	PUNCT
ajlm-41	177	10	miwatani	miwatani	PROPN
ajlm-41	177	11	t	t	PROPN
ajlm-41	177	12	,	,	PUNCT
ajlm-41	177	13	et	et	PROPN
ajlm-41	177	14	al	al	PROPN
ajlm-41	177	15	.	.	PUNCT
ajlm-41	177	16	purification	purification	NOUN
ajlm-41	177	17	and	and	CCONJ
ajlm-41	177	18	characterization	characterization	NOUN
ajlm-41	177	19	of	of	ADP
ajlm-41	177	20	a	a	DET
ajlm-41	177	21	heat	heat	NOUN
ajlm-41	177	22	-	-	PUNCT
ajlm-41	177	23	stable	stable	ADJ
ajlm-41	177	24	enterotoxin	enterotoxin	X
ajlm-41	177	25	of	of	ADP
ajlm-41	177	26	vibrio	vibrio	ADJ
ajlm-41	177	27	mimicus	mimicus	NOUN
ajlm-41	177	28	.	.	PUNCT
ajlm-41	178	1	fems	fems	PROPN
ajlm-41	178	2	microbiol	microbiol	PROPN
ajlm-41	178	3	lett	lett	PROPN
ajlm-41	178	4	.	.	PUNCT
ajlm-41	179	1	1991;63(1):105–110	1991;63(1):105–110	X
ajlm-41	179	2	.	.	PUNCT
ajlm-41	180	1	http://dx.doi.org/10.1111/j.1574-6968.1991.tb04513.x	http://dx.doi.org/10.1111/j.1574-6968.1991.tb04513.x	PROPN
ajlm-41	181	1	19.dirita	19.dirita	NUM
ajlm-41	181	2	vj	vj	PROPN
ajlm-41	181	3	.	.	PUNCT
ajlm-41	181	4	co	co	ADJ
ajlm-41	181	5	-	-	NOUN
ajlm-41	181	6	ordinate	ordinate	NOUN
ajlm-41	181	7	expression	expression	NOUN
ajlm-41	181	8	of	of	ADP
ajlm-41	181	9	virulence	virulence	NOUN
ajlm-41	181	10	genes	gene	NOUN
ajlm-41	181	11	by	by	ADP
ajlm-41	181	12	toxr	toxr	NOUN
ajlm-41	181	13	in	in	ADP
ajlm-41	181	14	vibrio	vibrio	ADJ
ajlm-41	181	15	cholerae	cholerae	PROPN
ajlm-41	181	16	.	.	PUNCT
ajlm-41	182	1	mol	mol	ADP
ajlm-41	182	2	microbiol	microbiol	PROPN
ajlm-41	182	3	.	.	PUNCT
ajlm-41	183	1	1992;6(4):451–458	1992;6(4):451–458	NUM
ajlm-41	183	2	.	.	PUNCT
ajlm-41	184	1	http://dx.doi.org/10.1111/j.1365-2958.1992.tb01489.x	http://dx.doi.org/10.1111/j.1365-2958.1992.tb01489.x	PROPN
ajlm-41	185	1	20.herrington	20.herrington	PROPN
ajlm-41	185	2	da	da	PROPN
ajlm-41	185	3	.	.	PUNCT
ajlm-41	186	1	toxin	toxin	PROPN
ajlm-41	186	2	,	,	PUNCT
ajlm-41	186	3	toxin	toxin	NOUN
ajlm-41	186	4	-	-	PUNCT
ajlm-41	186	5	coregulated	coregulate	VERB
ajlm-41	186	6	pili	pili	NOUN
ajlm-41	186	7	,	,	PUNCT
ajlm-41	186	8	and	and	CCONJ
ajlm-41	186	9	the	the	DET
ajlm-41	186	10	toxr	toxr	NOUN
ajlm-41	186	11	regulon	regulon	NOUN
ajlm-41	186	12	are	be	AUX
ajlm-41	186	13	essential	essential	ADJ
ajlm-41	186	14	for	for	ADP
ajlm-41	186	15	vibrio	vibrio	ADJ
ajlm-41	186	16	cholerae	cholerae	NOUN
ajlm-41	186	17	pathogenesis	pathogenesis	NOUN
ajlm-41	186	18	in	in	ADP
ajlm-41	186	19	humans	human	NOUN
ajlm-41	186	20	.	.	PUNCT
ajlm-41	187	1	j	j	PROPN
ajlm-41	187	2	exp	exp	NOUN
ajlm-41	187	3	med	med	PROPN
ajlm-41	187	4	.	.	PUNCT
ajlm-41	188	1	1998;168(4):1487–1492	1998;168(4):1487–1492	NUM
ajlm-41	188	2	.	.	PUNCT
ajlm-41	188	3	http://dx.doi.org/10.1084/jem.168.4.1487	http://dx.doi.org/10.1084/jem.168.4.1487	X
ajlm-41	189	1	21.shi	21.shi	PROPN
ajlm-41	189	2	l	l	PROPN
ajlm-41	189	3	,	,	PUNCT
ajlm-41	189	4	miyoshi	miyoshi	PROPN
ajlm-41	189	5	s	s	PROPN
ajlm-41	189	6	,	,	PUNCT
ajlm-41	189	7	hiura	hiura	NOUN
ajlm-41	189	8	m	m	PROPN
ajlm-41	189	9	,	,	PUNCT
ajlm-41	189	10	et	et	PROPN
ajlm-41	189	11	al	al	PROPN
ajlm-41	189	12	.	.	PROPN
ajlm-41	189	13	1998	1998	NUM
ajlm-41	189	14	.	.	PUNCT
ajlm-41	190	1	detection	detection	NOUN
ajlm-41	190	2	of	of	ADP
ajlm-41	190	3	genes	gene	NOUN
ajlm-41	190	4	encoding	encode	VERB
ajlm-41	190	5	cholera	cholera	NOUN
ajlm-41	190	6	toxin	toxin	NOUN
ajlm-41	190	7	(	(	PUNCT
ajlm-41	190	8	ct	ct	PROPN
ajlm-41	190	9	)	)	PUNCT
ajlm-41	190	10	,	,	PUNCT
ajlm-41	190	11	zonula	zonula	NOUN
ajlm-41	190	12	occludens	occluden	NOUN
ajlm-41	190	13	toxin	toxin	PROPN
ajlm-41	190	14	(	(	PUNCT
ajlm-41	190	15	zot	zot	PROPN
ajlm-41	190	16	)	)	PUNCT
ajlm-41	190	17	,	,	PUNCT
ajlm-41	190	18	accessory	accessory	NOUN
ajlm-41	190	19	cholera	cholera	NOUN
ajlm-41	190	20	enterotoxin	enterotoxin	X
ajlm-41	190	21	(	(	PUNCT
ajlm-41	190	22	ace	ace	NOUN
ajlm-41	190	23	)	)	PUNCT
ajlm-41	190	24	and	and	CCONJ
ajlm-41	190	25	heat	heat	NOUN
ajlm-41	190	26	-	-	PUNCT
ajlm-41	190	27	stable	stable	ADJ
ajlm-41	190	28	enterotoxin	enterotoxin	X
ajlm-41	190	29	(	(	PUNCT
ajlm-41	190	30	st	st	NOUN
ajlm-41	190	31	)	)	PUNCT
ajlm-41	190	32	in	in	ADP
ajlm-41	190	33	vibrio	vibrio	ADJ
ajlm-41	190	34	mimicus	mimicus	ADJ
ajlm-41	190	35	clinical	clinical	ADJ
ajlm-41	190	36	strains	strain	NOUN
ajlm-41	190	37	.	.	PUNCT
ajlm-41	191	1	microbiol	microbiol	PROPN
ajlm-41	191	2	immunol	immunol	NOUN
ajlm-41	191	3	.	.	PUNCT
ajlm-41	192	1	1998;42(12):823–828	1998;42(12):823–828	NUM
ajlm-41	192	2	.	.	PUNCT
ajlm-41	193	1	http://dx.doi.org/10.1111/j.1348-0421.1998.tb02357.x	http://dx.doi.org/10.1111/j.1348-0421.1998.tb02357.x	PROPN
ajlm-41	193	2	22.vicente	22.vicente	NUM
ajlm-41	193	3	ac	ac	PROPN
ajlm-41	193	4	,	,	PUNCT
ajlm-41	193	5	coelho	coelho	PROPN
ajlm-41	193	6	am	am	PROPN
ajlm-41	193	7	,	,	PUNCT
ajlm-41	193	8	salles	salles	PROPN
ajlm-41	193	9	ca	ca	PROPN
ajlm-41	193	10	.	.	PUNCT
ajlm-41	194	1	detection	detection	NOUN
ajlm-41	194	2	of	of	ADP
ajlm-41	194	3	vibrio	vibrio	ADJ
ajlm-41	194	4	cholerae	cholerae	NOUN
ajlm-41	194	5	and	and	CCONJ
ajlm-41	194	6	v.	v.	ADP
ajlm-41	194	7	mimicus	mimicus	ADJ
ajlm-41	194	8	heat	heat	NOUN
ajlm-41	194	9	-	-	PUNCT
ajlm-41	194	10	stable	stable	ADJ
ajlm-41	194	11	toxin	toxin	NOUN
ajlm-41	194	12	gene	gene	NOUN
ajlm-41	194	13	sequence	sequence	NOUN
ajlm-41	194	14	by	by	ADP
ajlm-41	194	15	pcr	pcr	PROPN
ajlm-41	194	16	.	.	PUNCT
ajlm-41	195	1	j	j	PROPN
ajlm-41	195	2	med	med	PROPN
ajlm-41	195	3	microbiol	microbiol	PROPN
ajlm-41	195	4	.	.	PUNCT
ajlm-41	196	1	1997;46(5):398–402	1997;46(5):398–402	X
ajlm-41	196	2	.	.	PUNCT
ajlm-41	197	1	http://dx.doi.org/10.1099/00222615-46-5-398	http://dx.doi.org/10.1099/00222615-46-5-398	X
ajlm-41	198	1	23.bhanumathi	23.bhanumathi	NUM
ajlm-41	198	2	r	r	NOUN
ajlm-41	198	3	,	,	PUNCT
ajlm-41	198	4	sabeena	sabeena	ADJ
ajlm-41	198	5	f	f	PROPN
ajlm-41	198	6	,	,	PUNCT
ajlm-41	198	7	isac	isac	PROPN
ajlm-41	198	8	sr	sr	PROPN
ajlm-41	198	9	,	,	PUNCT
ajlm-41	198	10	et	et	PROPN
ajlm-41	198	11	al	al	PROPN
ajlm-41	198	12	.	.	PUNCT
ajlm-41	199	1	molecular	molecular	ADJ
ajlm-41	199	2	characterization	characterization	NOUN
ajlm-41	199	3	of	of	ADP
ajlm-41	199	4	vibrio	vibrio	ADJ
ajlm-41	199	5	cholerae	cholerae	NOUN
ajlm-41	199	6	o139	o139	PROPN
ajlm-41	199	7	bengal	bengal	PROPN
ajlm-41	199	8	isolated	isolate	VERB
ajlm-41	199	9	from	from	ADP
ajlm-41	199	10	water	water	NOUN
ajlm-41	199	11	and	and	CCONJ
ajlm-41	199	12	the	the	DET
ajlm-41	199	13	aquatic	aquatic	ADJ
ajlm-41	199	14	plant	plant	NOUN
ajlm-41	199	15	eichhornia	eichhornia	NOUN
ajlm-41	199	16	crassipes	crassipe	NOUN
ajlm-41	199	17	in	in	ADP
ajlm-41	199	18	the	the	DET
ajlm-41	199	19	river	river	NOUN
ajlm-41	199	20	ganga	ganga	PROPN
ajlm-41	199	21	,	,	PUNCT
ajlm-41	199	22	varanasi	varanasi	PROPN
ajlm-41	199	23	,	,	PUNCT
ajlm-41	199	24	india	india	PROPN
ajlm-41	199	25	.	.	PUNCT
ajlm-41	200	1	appl	appl	PROPN
ajlm-41	200	2	environ	environ	PROPN
ajlm-41	200	3	microbiol	microbiol	PROPN
ajlm-41	200	4	.	.	PUNCT
ajlm-41	201	1	2003;69:2389–2394	2003;69:2389–2394	NUM
ajlm-41	201	2	.	.	PUNCT
ajlm-41	201	3	http://dx.doi.org/10.1128/aem.69.4.2389-2394.2003	http://dx.doi.org/10.1128/aem.69.4.2389-2394.2003	PUNCT