id	sid	tid	token	lemma	pos
bracis-19036	1	1	on	on	ADP
bracis-19036	1	2	the	the	DET
bracis-19036	1	3	 	 	SPACE
bracis-19036	1	4	analysis	analysis	NOUN
bracis-19036	1	5	of	of	ADP
bracis-19036	1	6	 	 	SPACE
bracis-19036	1	7	cgp	cgp	PROPN
bracis-19036	1	8	mutation	mutation	NOUN
bracis-19036	1	9	operators	operator	NOUN
bracis-19036	1	10	when	when	SCONJ
bracis-19036	1	11	inferring	infer	VERB
bracis-19036	1	12	gene	gene	NOUN
bracis-19036	1	13	regulatory	regulatory	ADJ
bracis-19036	1	14	networks	network	NOUN
bracis-19036	1	15	using	use	VERB
bracis-19036	1	16	scrna	scrna	NOUN
bracis-19036	1	17	-	-	PUNCT
bracis-19036	1	18	seq	seq	NOUN
bracis-19036	1	19	time	time	NOUN
bracis-19036	1	20	series	series	PROPN
bracis-19036	1	21	data	data	PROPN
bracis-19036	1	22	|	|	ADP
bracis-19036	1	23	springer	springer	NOUN
bracis-19036	1	24	nature	nature	PROPN
bracis-19036	1	25	link	link	PROPN
bracis-19036	1	26	(	(	PUNCT
bracis-19036	1	27	formerly	formerly	ADV
bracis-19036	1	28	springerlink	springerlink	NOUN
bracis-19036	1	29	)	)	PUNCT
bracis-19036	1	30	skip	skip	VERB
bracis-19036	1	31	to	to	ADP
bracis-19036	1	32	main	main	ADJ
bracis-19036	1	33	content	content	NOUN
bracis-19036	1	34	advertisement	advertisement	NOUN
bracis-19036	1	35	log	log	NOUN
bracis-19036	1	36	in	in	ADP
bracis-19036	1	37	menu	menu	NOUN
bracis-19036	1	38	find	find	VERB
bracis-19036	1	39	a	a	DET
bracis-19036	1	40	journal	journal	NOUN
bracis-19036	1	41	publish	publish	VERB
bracis-19036	1	42	with	with	ADP
bracis-19036	1	43	us	we	PRON
bracis-19036	1	44	track	track	VERB
bracis-19036	1	45	your	your	PRON
bracis-19036	1	46	research	research	NOUN
bracis-19036	1	47	search	search	NOUN
bracis-19036	1	48	cart	cart	NOUN
bracis-19036	1	49	home	home	NOUN
bracis-19036	1	50	intelligent	intelligent	ADJ
bracis-19036	1	51	systems	system	NOUN
bracis-19036	1	52	conference	conference	NOUN
bracis-19036	1	53	paper	paper	NOUN
bracis-19036	1	54	on	on	ADP
bracis-19036	1	55	the	the	DET
bracis-19036	1	56	 	 	SPACE
bracis-19036	1	57	analysis	analysis	NOUN
bracis-19036	1	58	of	of	ADP
bracis-19036	1	59	 	 	SPACE
bracis-19036	1	60	cgp	cgp	PROPN
bracis-19036	1	61	mutation	mutation	NOUN
bracis-19036	1	62	operators	operator	NOUN
bracis-19036	1	63	when	when	SCONJ
bracis-19036	1	64	inferring	infer	VERB
bracis-19036	1	65	gene	gene	NOUN
bracis-19036	1	66	regulatory	regulatory	ADJ
bracis-19036	1	67	networks	network	NOUN
bracis-19036	1	68	using	use	VERB
bracis-19036	1	69	scrna	scrna	NOUN
bracis-19036	1	70	-	-	PUNCT
bracis-19036	1	71	seq	seq	NOUN
bracis-19036	1	72	time	time	NOUN
bracis-19036	1	73	series	series	PROPN
bracis-19036	1	74	data	data	PROPN
bracis-19036	1	75	conference	conference	PROPN
bracis-19036	1	76	paper	paper	NOUN
bracis-19036	1	77	first	first	ADV
bracis-19036	1	78	online	online	ADV
bracis-19036	1	79	:	:	PUNCT
bracis-19036	1	80	28	28	NUM
bracis-19036	1	81	november	november	NOUN
bracis-19036	1	82	2021	2021	NUM
bracis-19036	1	83	pp	pp	ADP
bracis-19036	1	84	264–279	264–279	NUM
bracis-19036	1	85	cite	cite	VERB
bracis-19036	1	86	this	this	DET
bracis-19036	1	87	conference	conference	NOUN
bracis-19036	1	88	paper	paper	NOUN
bracis-19036	1	89	access	access	NOUN
bracis-19036	1	90	provided	provide	VERB
bracis-19036	1	91	by	by	ADP
bracis-19036	1	92	university	university	PROPN
bracis-19036	1	93	of	of	ADP
bracis-19036	1	94	notre	notre	PROPN
bracis-19036	1	95	dame	dame	PROPN
bracis-19036	1	96	hesburgh	hesburgh	PROPN
bracis-19036	1	97	library	library	PROPN
bracis-19036	1	98	download	download	PROPN
bracis-19036	1	99	book	book	NOUN
bracis-19036	1	100	pdf	pdf	PROPN
bracis-19036	1	101	download	download	NOUN
bracis-19036	1	102	book	book	NOUN
bracis-19036	1	103	epub	epub	PROPN
bracis-19036	1	104	intelligent	intelligent	ADJ
bracis-19036	1	105	systems	system	NOUN
bracis-19036	1	106	(	(	PUNCT
bracis-19036	1	107	bracis	bracis	NOUN
bracis-19036	1	108	2021	2021	NUM
bracis-19036	1	109	)	)	PUNCT
bracis-19036	1	110	on	on	ADP
bracis-19036	1	111	the	the	DET
bracis-19036	1	112	 	 	SPACE
bracis-19036	1	113	analysis	analysis	NOUN
bracis-19036	1	114	of	of	ADP
bracis-19036	1	115	 	 	SPACE
bracis-19036	1	116	cgp	cgp	PROPN
bracis-19036	1	117	mutation	mutation	NOUN
bracis-19036	1	118	operators	operator	NOUN
bracis-19036	1	119	when	when	SCONJ
bracis-19036	1	120	inferring	infer	VERB
bracis-19036	1	121	gene	gene	NOUN
bracis-19036	1	122	regulatory	regulatory	ADJ
bracis-19036	1	123	networks	network	NOUN
bracis-19036	1	124	using	use	VERB
bracis-19036	1	125	scrna	scrna	NOUN
bracis-19036	1	126	-	-	PUNCT
bracis-19036	1	127	seq	seq	NOUN
bracis-19036	1	128	time	time	NOUN
bracis-19036	1	129	series	series	PROPN
bracis-19036	1	130	data	data	PROPN
bracis-19036	1	131	download	download	PROPN
bracis-19036	1	132	book	book	NOUN
bracis-19036	1	133	pdf	pdf	PROPN
bracis-19036	1	134	download	download	NOUN
bracis-19036	1	135	book	book	PROPN
bracis-19036	1	136	epub	epub	PROPN
bracis-19036	1	137	josé	josé	PROPN
bracis-19036	1	138	eduardo	eduardo	PROPN
bracis-19036	1	139	h.	h.	PROPN
bracis-19036	1	140	da	da	PROPN
bracis-19036	1	141	silva10	silva10	PROPN
bracis-19036	1	142	,	,	PUNCT
bracis-19036	1	143	heder	heder	PROPN
bracis-19036	1	144	s.	s.	PROPN
bracis-19036	1	145	bernardino10	bernardino10	PROPN
bracis-19036	1	146	,	,	PUNCT
bracis-19036	1	147	itamar	itamar	PROPN
bracis-19036	1	148	l.	l.	PROPN
bracis-19036	1	149	de	de	PROPN
bracis-19036	1	150	oliveira10	oliveira10	PROPN
bracis-19036	1	151	,	,	PUNCT
bracis-19036	1	152	alex	alex	PROPN
bracis-19036	1	153	b.	b.	PROPN
bracis-19036	1	154	vieira10	vieira10	PROPN
bracis-19036	1	155	&	&	CCONJ
bracis-19036	1	156	…	…	PUNCT
bracis-19036	1	157	helio	helio	PROPN
bracis-19036	1	158	j.	j.	PROPN
bracis-19036	1	159	c.	c.	PROPN
bracis-19036	1	160	barbosa10,11	barbosa10,11	PROPN
bracis-19036	1	161	  	  	SPACE
bracis-19036	1	162	show	show	VERB
bracis-19036	1	163	authors	author	NOUN
bracis-19036	1	164	part	part	NOUN
bracis-19036	1	165	of	of	ADP
bracis-19036	1	166	the	the	DET
bracis-19036	1	167	book	book	NOUN
bracis-19036	1	168	series	series	NOUN
bracis-19036	1	169	:	:	PUNCT
bracis-19036	1	170	lecture	lecture	NOUN
bracis-19036	1	171	notes	note	NOUN
bracis-19036	1	172	in	in	ADP
bracis-19036	1	173	computer	computer	NOUN
bracis-19036	1	174	science	science	NOUN
bracis-19036	1	175	(	(	PUNCT
bracis-19036	1	176	(	(	PUNCT
bracis-19036	1	177	lnai	lnai	ADJ
bracis-19036	1	178	,	,	PUNCT
bracis-19036	1	179	volume	volume	NOUN
bracis-19036	1	180	13073	13073	NUM
bracis-19036	1	181	)	)	PUNCT
bracis-19036	1	182	)	)	PUNCT
bracis-19036	1	183	included	include	VERB
bracis-19036	1	184	in	in	ADP
bracis-19036	1	185	the	the	DET
bracis-19036	1	186	following	follow	VERB
bracis-19036	1	187	conference	conference	NOUN
bracis-19036	1	188	series	series	NOUN
bracis-19036	1	189	:	:	PUNCT
bracis-19036	1	190	brazilian	brazilian	ADJ
bracis-19036	1	191	conference	conference	NOUN
bracis-19036	1	192	on	on	ADP
bracis-19036	1	193	intelligent	intelligent	ADJ
bracis-19036	1	194	systems	system	NOUN
bracis-19036	1	195	744	744	NUM
bracis-19036	1	196	accesses	access	NOUN
bracis-19036	1	197	2	2	NUM
bracis-19036	1	198	citations	citation	NOUN
bracis-19036	1	199	abstract	abstract	ADJ
bracis-19036	1	200	gene	gene	NOUN
bracis-19036	1	201	regulatory	regulatory	ADJ
bracis-19036	1	202	networks	network	NOUN
bracis-19036	1	203	(	(	PUNCT
bracis-19036	1	204	grns	grns	PROPN
bracis-19036	1	205	)	)	PUNCT
bracis-19036	1	206	inference	inference	NOUN
bracis-19036	1	207	from	from	ADP
bracis-19036	1	208	gene	gene	NOUN
bracis-19036	1	209	expression	expression	NOUN
bracis-19036	1	210	data	datum	NOUN
bracis-19036	1	211	is	be	AUX
bracis-19036	1	212	a	a	DET
bracis-19036	1	213	hard	hard	ADJ
bracis-19036	1	214	task	task	NOUN
bracis-19036	1	215	and	and	CCONJ
bracis-19036	1	216	a	a	DET
bracis-19036	1	217	widely	widely	ADV
bracis-19036	1	218	addressed	address	VERB
bracis-19036	1	219	challenge	challenge	NOUN
bracis-19036	1	220	.	.	PUNCT
bracis-19036	2	1	grns	grn	NOUN
bracis-19036	2	2	can	can	AUX
bracis-19036	2	3	be	be	AUX
bracis-19036	2	4	represented	represent	VERB
bracis-19036	2	5	as	as	ADP
bracis-19036	2	6	boolean	boolean	ADJ
bracis-19036	2	7	models	model	NOUN
bracis-19036	2	8	similarly	similarly	ADV
bracis-19036	2	9	to	to	ADP
bracis-19036	2	10	digital	digital	ADJ
bracis-19036	2	11	circuits	circuit	NOUN
bracis-19036	2	12	.	.	PUNCT
bracis-19036	3	1	cartesian	cartesian	ADJ
bracis-19036	3	2	genetic	genetic	ADJ
bracis-19036	3	3	programming	programming	NOUN
bracis-19036	3	4	(	(	PUNCT
bracis-19036	3	5	cgp	cgp	PROPN
bracis-19036	3	6	)	)	PUNCT
bracis-19036	3	7	,	,	PUNCT
bracis-19036	3	8	often	often	ADV
bracis-19036	3	9	used	use	VERB
bracis-19036	3	10	for	for	ADP
bracis-19036	3	11	designing	design	VERB
bracis-19036	3	12	circuits	circuit	NOUN
bracis-19036	3	13	,	,	PUNCT
bracis-19036	3	14	can	can	AUX
bracis-19036	3	15	thus	thus	ADV
bracis-19036	3	16	be	be	AUX
bracis-19036	3	17	adopted	adopt	VERB
bracis-19036	3	18	in	in	ADP
bracis-19036	3	19	the	the	DET
bracis-19036	3	20	inference	inference	NOUN
bracis-19036	3	21	of	of	ADP
bracis-19036	3	22	grns	grns	PROPN
bracis-19036	3	23	.	.	PUNCT
bracis-19036	4	1	the	the	DET
bracis-19036	4	2	main	main	ADJ
bracis-19036	4	3	cgp	cgp	NOUN
bracis-19036	4	4	operator	operator	NOUN
bracis-19036	4	5	for	for	ADP
bracis-19036	4	6	generating	generate	VERB
bracis-19036	4	7	candidate	candidate	NOUN
bracis-19036	4	8	designs	design	NOUN
bracis-19036	4	9	is	be	AUX
bracis-19036	4	10	mutation	mutation	NOUN
bracis-19036	4	11	,	,	PUNCT
bracis-19036	4	12	making	make	VERB
bracis-19036	4	13	its	its	PRON
bracis-19036	4	14	choice	choice	NOUN
bracis-19036	4	15	important	important	ADJ
bracis-19036	4	16	for	for	ADP
bracis-19036	4	17	obtaining	obtain	VERB
bracis-19036	4	18	good	good	ADJ
bracis-19036	4	19	results	result	NOUN
bracis-19036	4	20	.	.	PUNCT
bracis-19036	5	1	although	although	SCONJ
bracis-19036	5	2	there	there	PRON
bracis-19036	5	3	are	be	VERB
bracis-19036	5	4	many	many	ADJ
bracis-19036	5	5	mutation	mutation	NOUN
bracis-19036	5	6	operators	operator	NOUN
bracis-19036	5	7	for	for	ADP
bracis-19036	5	8	cgp	cgp	PROPN
bracis-19036	5	9	,	,	PUNCT
bracis-19036	5	10	to	to	ADP
bracis-19036	5	11	the	the	DET
bracis-19036	5	12	best	good	ADJ
bracis-19036	5	13	of	of	ADP
bracis-19036	5	14	our	our	PRON
bracis-19036	5	15	knowledge	knowledge	NOUN
bracis-19036	5	16	,	,	PUNCT
bracis-19036	5	17	there	there	PRON
bracis-19036	5	18	is	be	VERB
bracis-19036	5	19	no	no	DET
bracis-19036	5	20	analysis	analysis	NOUN
bracis-19036	5	21	of	of	ADP
bracis-19036	5	22	them	they	PRON
bracis-19036	5	23	in	in	ADP
bracis-19036	5	24	the	the	DET
bracis-19036	5	25	grn	grn	PROPN
bracis-19036	5	26	inference	inference	NOUN
bracis-19036	5	27	problem	problem	NOUN
bracis-19036	5	28	.	.	PUNCT
bracis-19036	6	1	an	an	DET
bracis-19036	6	2	evaluation	evaluation	NOUN
bracis-19036	6	3	of	of	ADP
bracis-19036	6	4	the	the	DET
bracis-19036	6	5	single	single	ADJ
bracis-19036	6	6	active	active	ADJ
bracis-19036	6	7	mutation	mutation	NOUN
bracis-19036	6	8	(	(	PUNCT
bracis-19036	6	9	sam	sam	PROPN
bracis-19036	6	10	)	)	PUNCT
bracis-19036	6	11	and	and	CCONJ
bracis-19036	6	12	the	the	DET
bracis-19036	6	13	semantically	semantically	ADV
bracis-19036	6	14	-	-	PUNCT
bracis-19036	6	15	oriented	orient	VERB
bracis-19036	6	16	mutation	mutation	NOUN
bracis-19036	6	17	operator	operator	NOUN
bracis-19036	6	18	(	(	PUNCT
bracis-19036	6	19	somo	somo	PROPN
bracis-19036	6	20	)	)	PUNCT
bracis-19036	6	21	is	be	AUX
bracis-19036	6	22	performed	perform	VERB
bracis-19036	6	23	here	here	ADV
bracis-19036	6	24	for	for	ADP
bracis-19036	6	25	grns	grns	PROPN
bracis-19036	6	26	inference	inference	PROPN
bracis-19036	6	27	.	.	PUNCT
bracis-19036	7	1	also	also	ADV
bracis-19036	7	2	,	,	PUNCT
bracis-19036	7	3	a	a	DET
bracis-19036	7	4	combination	combination	NOUN
bracis-19036	7	5	of	of	ADP
bracis-19036	7	6	both	both	DET
bracis-19036	7	7	operators	operator	NOUN
bracis-19036	7	8	is	be	AUX
bracis-19036	7	9	proposed	propose	VERB
bracis-19036	7	10	.	.	PUNCT
bracis-19036	8	1	we	we	PRON
bracis-19036	8	2	use	use	VERB
bracis-19036	8	3	a	a	DET
bracis-19036	8	4	benchmark	benchmark	ADJ
bracis-19036	8	5	single	single	ADJ
bracis-19036	8	6	-	-	PUNCT
bracis-19036	8	7	cell	cell	NOUN
bracis-19036	8	8	rna	rna	NOUN
bracis-19036	8	9	-	-	PUNCT
bracis-19036	8	10	sequencing	sequence	VERB
bracis-19036	8	11	time	time	NOUN
bracis-19036	8	12	series	series	NOUN
bracis-19036	8	13	data	datum	NOUN
bracis-19036	8	14	and	and	CCONJ
bracis-19036	8	15	its	its	PRON
bracis-19036	8	16	evaluation	evaluation	NOUN
bracis-19036	8	17	pipeline	pipeline	NOUN
bracis-19036	8	18	to	to	PART
bracis-19036	8	19	measure	measure	VERB
bracis-19036	8	20	the	the	DET
bracis-19036	8	21	performance	performance	NOUN
bracis-19036	8	22	of	of	ADP
bracis-19036	8	23	the	the	DET
bracis-19036	8	24	approaches	approach	NOUN
bracis-19036	8	25	.	.	PUNCT
bracis-19036	9	1	the	the	DET
bracis-19036	9	2	experiments	experiment	NOUN
bracis-19036	9	3	indicate	indicate	VERB
bracis-19036	9	4	that	that	SCONJ
bracis-19036	9	5	(	(	PUNCT
bracis-19036	9	6	i	i	NOUN
bracis-19036	9	7	)	)	PUNCT
bracis-19036	9	8	combining	combine	VERB
bracis-19036	9	9	somo	somo	PROPN
bracis-19036	9	10	and	and	CCONJ
bracis-19036	9	11	sam	sam	PROPN
bracis-19036	9	12	provides	provide	VERB
bracis-19036	9	13	the	the	DET
bracis-19036	9	14	best	good	ADJ
bracis-19036	9	15	results	result	NOUN
bracis-19036	9	16	,	,	PUNCT
bracis-19036	9	17	and	and	CCONJ
bracis-19036	9	18	(	(	PUNCT
bracis-19036	9	19	ii	ii	NOUN
bracis-19036	9	20	)	)	PUNCT
bracis-19036	9	21	the	the	DET
bracis-19036	9	22	results	result	NOUN
bracis-19036	9	23	obtained	obtain	VERB
bracis-19036	9	24	by	by	ADP
bracis-19036	9	25	the	the	DET
bracis-19036	9	26	proposal	proposal	NOUN
bracis-19036	9	27	are	be	AUX
bracis-19036	9	28	competitive	competitive	ADJ
bracis-19036	9	29	with	with	ADP
bracis-19036	9	30	those	those	PRON
bracis-19036	9	31	from	from	ADP
bracis-19036	9	32	state	state	NOUN
bracis-19036	9	33	-	-	PUNCT
bracis-19036	9	34	of	of	ADP
bracis-19036	9	35	-	-	PUNCT
bracis-19036	9	36	the	the	DET
bracis-19036	9	37	-	-	PUNCT
bracis-19036	9	38	art	art	NOUN
bracis-19036	9	39	methods	method	NOUN
bracis-19036	9	40	.	.	PUNCT
bracis-19036	10	1	access	access	NOUN
bracis-19036	10	2	provided	provide	VERB
bracis-19036	10	3	by	by	ADP
bracis-19036	10	4	university	university	PROPN
bracis-19036	10	5	of	of	ADP
bracis-19036	10	6	notre	notre	PROPN
bracis-19036	10	7	dame	dame	PROPN
bracis-19036	10	8	hesburgh	hesburgh	PROPN
bracis-19036	10	9	library	library	PROPN
bracis-19036	10	10	.	.	PUNCT
bracis-19036	11	1	download	download	PROPN
bracis-19036	11	2	conference	conference	NOUN
bracis-19036	11	3	paper	paper	NOUN
bracis-19036	11	4	pdf	pdf	NOUN
bracis-19036	11	5	similar	similar	ADJ
bracis-19036	11	6	content	content	NOUN
bracis-19036	11	7	being	be	AUX
bracis-19036	11	8	viewed	view	VERB
bracis-19036	11	9	by	by	ADP
bracis-19036	11	10	others	other	NOUN
bracis-19036	11	11	semantically	semantically	ADV
bracis-19036	11	12	-	-	PUNCT
bracis-19036	11	13	oriented	orient	VERB
bracis-19036	11	14	mutation	mutation	NOUN
bracis-19036	11	15	operator	operator	NOUN
bracis-19036	11	16	in	in	ADP
bracis-19036	11	17	cartesian	cartesian	ADJ
bracis-19036	11	18	genetic	genetic	ADJ
bracis-19036	11	19	programming	programming	NOUN
bracis-19036	11	20	for	for	ADP
bracis-19036	11	21	evolutionary	evolutionary	ADJ
bracis-19036	11	22	circuit	circuit	NOUN
bracis-19036	11	23	design	design	NOUN
bracis-19036	11	24	article	article	NOUN
bracis-19036	11	25	02	02	NUM
bracis-19036	11	26	october	october	PROPN
bracis-19036	11	27	2021	2021	NUM
bracis-19036	11	28	cartesian	cartesian	ADJ
bracis-19036	11	29	genetic	genetic	ADJ
bracis-19036	11	30	programming	programming	NOUN
bracis-19036	11	31	with	with	ADP
bracis-19036	11	32	guided	guide	VERB
bracis-19036	11	33	and	and	CCONJ
bracis-19036	11	34	single	single	ADJ
bracis-19036	11	35	active	active	ADJ
bracis-19036	11	36	mutations	mutation	NOUN
bracis-19036	11	37	for	for	ADP
bracis-19036	11	38	designing	design	VERB
bracis-19036	11	39	combinational	combinational	ADJ
bracis-19036	11	40	logic	logic	NOUN
bracis-19036	11	41	circuits	circuit	NOUN
bracis-19036	11	42	chapter	chapter	NOUN
bracis-19036	11	43	©	©	ADP
bracis-19036	11	44	2019	2019	NUM
bracis-19036	11	45	gene	gene	NOUN
bracis-19036	11	46	regulatory	regulatory	ADJ
bracis-19036	11	47	network	network	NOUN
bracis-19036	11	48	reconstruction	reconstruction	NOUN
bracis-19036	11	49	:	:	PUNCT
bracis-19036	11	50	harnessing	harness	VERB
bracis-19036	11	51	the	the	DET
bracis-19036	11	52	power	power	NOUN
bracis-19036	11	53	of	of	ADP
bracis-19036	11	54	single	single	ADJ
bracis-19036	11	55	-	-	PUNCT
bracis-19036	11	56	cell	cell	NOUN
bracis-19036	11	57	multi	multi	ADJ
bracis-19036	11	58	-	-	ADJ
bracis-19036	11	59	omic	omic	ADJ
bracis-19036	11	60	data	datum	NOUN
bracis-19036	11	61	article	article	NOUN
bracis-19036	11	62	open	open	ADJ
bracis-19036	11	63	access	access	NOUN
bracis-19036	11	64	19	19	NUM
bracis-19036	11	65	october	october	PROPN
bracis-19036	11	66	2023	2023	NUM
bracis-19036	11	67	explore	explore	NOUN
bracis-19036	11	68	related	relate	VERB
bracis-19036	11	69	subjects	subject	NOUN
bracis-19036	11	70	discover	discover	VERB
bracis-19036	11	71	the	the	DET
bracis-19036	11	72	latest	late	ADJ
bracis-19036	11	73	articles	article	NOUN
bracis-19036	11	74	,	,	PUNCT
bracis-19036	11	75	books	book	NOUN
bracis-19036	11	76	and	and	CCONJ
bracis-19036	11	77	news	news	NOUN
bracis-19036	11	78	in	in	ADP
bracis-19036	11	79	related	related	ADJ
bracis-19036	11	80	subjects	subject	NOUN
bracis-19036	11	81	,	,	PUNCT
bracis-19036	11	82	suggested	suggest	VERB
bracis-19036	11	83	using	use	VERB
bracis-19036	11	84	machine	machine	NOUN
bracis-19036	11	85	learning	learning	NOUN
bracis-19036	11	86	.	.	PUNCT
bracis-19036	12	1	gene	gene	NOUN
bracis-19036	12	2	regulatory	regulatory	ADJ
bracis-19036	12	3	networks	network	NOUN
bracis-19036	12	4	genetic	genetic	ADJ
bracis-19036	12	5	models	model	NOUN
bracis-19036	12	6	genome	genome	NOUN
bracis-19036	12	7	-	-	PUNCT
bracis-19036	12	8	wide	wide	ADJ
bracis-19036	12	9	analysis	analysis	NOUN
bracis-19036	12	10	of	of	ADP
bracis-19036	12	11	gene	gene	NOUN
bracis-19036	12	12	expression	expression	NOUN
bracis-19036	12	13	regulatory	regulatory	ADJ
bracis-19036	12	14	networks	network	NOUN
bracis-19036	12	15	sequence	sequence	NOUN
bracis-19036	12	16	annotation	annotation	NOUN
bracis-19036	12	17	somatic	somatic	ADJ
bracis-19036	12	18	hypermutation	hypermutation	NOUN
bracis-19036	12	19	1	1	NUM
bracis-19036	12	20	introduction	introduction	NOUN
bracis-19036	12	21	systems	system	NOUN
bracis-19036	12	22	biology	biology	NOUN
bracis-19036	12	23	is	be	AUX
bracis-19036	12	24	an	an	DET
bracis-19036	12	25	interdisciplinary	interdisciplinary	ADJ
bracis-19036	12	26	research	research	NOUN
bracis-19036	12	27	area	area	NOUN
bracis-19036	12	28	that	that	PRON
bracis-19036	12	29	focuses	focus	VERB
bracis-19036	12	30	on	on	ADP
bracis-19036	12	31	the	the	DET
bracis-19036	12	32	computational	computational	ADJ
bracis-19036	12	33	and	and	CCONJ
bracis-19036	12	34	mathematical	mathematical	ADJ
bracis-19036	12	35	analysis	analysis	NOUN
bracis-19036	12	36	of	of	ADP
bracis-19036	12	37	interactions	interaction	NOUN
bracis-19036	12	38	among	among	ADP
bracis-19036	12	39	the	the	DET
bracis-19036	12	40	components	component	NOUN
bracis-19036	12	41	of	of	ADP
bracis-19036	12	42	a	a	DET
bracis-19036	12	43	biological	biological	ADJ
bracis-19036	12	44	system	system	NOUN
bracis-19036	12	45	 	 	SPACE
bracis-19036	13	1	[	[	X
bracis-19036	13	2	28	28	NUM
bracis-19036	13	3	]	]	PUNCT
bracis-19036	13	4	.	.	PUNCT
bracis-19036	14	1	all	all	DET
bracis-19036	14	2	cellular	cellular	ADJ
bracis-19036	14	3	activities	activity	NOUN
bracis-19036	14	4	are	be	AUX
bracis-19036	14	5	controlled	control	VERB
bracis-19036	14	6	by	by	ADP
bracis-19036	14	7	their	their	PRON
bracis-19036	14	8	genes	gene	NOUN
bracis-19036	14	9	through	through	ADP
bracis-19036	14	10	a	a	DET
bracis-19036	14	11	network	network	NOUN
bracis-19036	14	12	that	that	PRON
bracis-19036	14	13	forms	form	VERB
bracis-19036	14	14	proteins	protein	NOUN
bracis-19036	14	15	from	from	ADP
bracis-19036	14	16	dna	dna	PROPN
bracis-19036	14	17	.	.	PUNCT
bracis-19036	15	1	the	the	DET
bracis-19036	15	2	gene	gene	NOUN
bracis-19036	15	3	expression	expression	NOUN
bracis-19036	15	4	depends	depend	VERB
bracis-19036	15	5	on	on	ADP
bracis-19036	15	6	the	the	DET
bracis-19036	15	7	relationships	relationship	NOUN
bracis-19036	15	8	in	in	ADP
bracis-19036	15	9	this	this	DET
bracis-19036	15	10	network	network	NOUN
bracis-19036	15	11	,	,	PUNCT
bracis-19036	15	12	known	know	VERB
bracis-19036	15	13	as	as	ADP
bracis-19036	15	14	gene	gene	NOUN
bracis-19036	15	15	regulatory	regulatory	ADJ
bracis-19036	15	16	network	network	NOUN
bracis-19036	15	17	(	(	PUNCT
bracis-19036	15	18	grn	grn	PROPN
bracis-19036	15	19	)	)	PUNCT
bracis-19036	15	20	 	 	SPACE
bracis-19036	16	1	[	[	X
bracis-19036	16	2	13	13	NUM
bracis-19036	16	3	]	]	PUNCT
bracis-19036	16	4	.	.	PUNCT
bracis-19036	17	1	several	several	ADJ
bracis-19036	17	2	methods	method	NOUN
bracis-19036	17	3	have	have	AUX
bracis-19036	17	4	been	be	AUX
bracis-19036	17	5	developed	develop	VERB
bracis-19036	17	6	for	for	ADP
bracis-19036	17	7	the	the	DET
bracis-19036	17	8	inference	inference	NOUN
bracis-19036	17	9	of	of	ADP
bracis-19036	17	10	grns	grn	NOUN
bracis-19036	17	11	,	,	PUNCT
bracis-19036	17	12	such	such	ADJ
bracis-19036	17	13	as	as	ADP
bracis-19036	17	14	pidc	pidc	NOUN
bracis-19036	17	15	 	 	SPACE
bracis-19036	18	1	[	[	X
bracis-19036	18	2	3	3	NUM
bracis-19036	18	3	]	]	PUNCT
bracis-19036	18	4	,	,	PUNCT
bracis-19036	18	5	that	that	PRON
bracis-19036	18	6	uses	use	VERB
bracis-19036	18	7	partial	partial	ADJ
bracis-19036	18	8	information	information	NOUN
bracis-19036	18	9	decomposition	decomposition	NOUN
bracis-19036	18	10	(	(	PUNCT
bracis-19036	18	11	pid	pid	NOUN
bracis-19036	18	12	)	)	PUNCT
bracis-19036	18	13	to	to	PART
bracis-19036	18	14	identify	identify	VERB
bracis-19036	18	15	regulatory	regulatory	ADJ
bracis-19036	18	16	relationships	relationship	NOUN
bracis-19036	18	17	between	between	ADP
bracis-19036	18	18	genes	gene	NOUN
bracis-19036	18	19	,	,	PUNCT
bracis-19036	18	20	genie3	genie3	NOUN
bracis-19036	18	21	 	 	SPACE
bracis-19036	19	1	[	[	X
bracis-19036	19	2	12	12	NUM
bracis-19036	19	3	]	]	PUNCT
bracis-19036	19	4	,	,	PUNCT
bracis-19036	19	5	winner	winner	NOUN
bracis-19036	19	6	of	of	ADP
bracis-19036	19	7	the	the	DET
bracis-19036	19	8	dream5	dream5	NOUN
bracis-19036	19	9	network	network	NOUN
bracis-19036	19	10	challenge	challenge	NOUN
bracis-19036	19	11	,	,	PUNCT
bracis-19036	19	12	that	that	PRON
bracis-19036	19	13	decomposes	decompose	VERB
bracis-19036	19	14	the	the	DET
bracis-19036	19	15	prediction	prediction	NOUN
bracis-19036	19	16	of	of	ADP
bracis-19036	19	17	a	a	DET
bracis-19036	19	18	regulatory	regulatory	ADJ
bracis-19036	19	19	network	network	NOUN
bracis-19036	19	20	among	among	ADP
bracis-19036	19	21	p	p	NOUN
bracis-19036	19	22	genes	gene	NOUN
bracis-19036	19	23	into	into	ADP
bracis-19036	19	24	p	p	ADJ
bracis-19036	19	25	different	different	ADJ
bracis-19036	19	26	regression	regression	NOUN
bracis-19036	19	27	problems	problem	NOUN
bracis-19036	19	28	,	,	PUNCT
bracis-19036	19	29	and	and	CCONJ
bracis-19036	19	30	grnboost2	grnboost2	NOUN
bracis-19036	19	31	 	 	SPACE
bracis-19036	20	1	[	[	X
bracis-19036	20	2	19	19	NUM
bracis-19036	20	3	]	]	X
bracis-19036	20	4	,	,	PUNCT
bracis-19036	20	5	that	that	PRON
bracis-19036	20	6	is	be	AUX
bracis-19036	20	7	based	base	VERB
bracis-19036	20	8	on	on	ADP
bracis-19036	20	9	genie3	genie3	NOUN
bracis-19036	20	10	,	,	PUNCT
bracis-19036	20	11	and	and	CCONJ
bracis-19036	20	12	uses	use	VERB
bracis-19036	20	13	a	a	DET
bracis-19036	20	14	gradient	gradient	ADJ
bracis-19036	20	15	boosting	boost	VERB
bracis-19036	20	16	machine	machine	NOUN
bracis-19036	20	17	(	(	PUNCT
bracis-19036	20	18	gbm	gbm	NOUN
bracis-19036	20	19	)	)	PUNCT
bracis-19036	20	20	regression	regression	NOUN
bracis-19036	20	21	 	 	SPACE
bracis-19036	21	1	[	[	X
bracis-19036	21	2	7	7	NUM
bracis-19036	21	3	]	]	PUNCT
bracis-19036	21	4	.	.	PUNCT
bracis-19036	22	1	genie3	genie3	NOUN
bracis-19036	22	2	and	and	CCONJ
bracis-19036	22	3	grnboost2	grnboost2	NOUN
bracis-19036	22	4	are	be	AUX
bracis-19036	22	5	provided	provide	VERB
bracis-19036	22	6	in	in	ADP
bracis-19036	22	7	the	the	DET
bracis-19036	22	8	same	same	ADJ
bracis-19036	22	9	python	python	NOUN
bracis-19036	22	10	package	package	NOUN
bracis-19036	22	11	arboreto	arboreto	VERB
bracis-19036	22	12	 	 	SPACE
bracis-19036	23	1	[	[	X
bracis-19036	23	2	19	19	NUM
bracis-19036	23	3	]	]	PUNCT
bracis-19036	23	4	.	.	PUNCT
bracis-19036	24	1	also	also	ADV
bracis-19036	24	2	,	,	PUNCT
bracis-19036	24	3	evolutionary	evolutionary	ADJ
bracis-19036	24	4	computation	computation	NOUN
bracis-19036	24	5	techniques	technique	NOUN
bracis-19036	24	6	have	have	AUX
bracis-19036	24	7	been	be	AUX
bracis-19036	24	8	applied	apply	VERB
bracis-19036	24	9	to	to	PART
bracis-19036	24	10	infer	infer	VERB
bracis-19036	24	11	gene	gene	NOUN
bracis-19036	24	12	regulatory	regulatory	ADJ
bracis-19036	24	13	networks	network	NOUN
bracis-19036	24	14	.	.	PUNCT
bracis-19036	25	1	for	for	ADP
bracis-19036	25	2	instance	instance	NOUN
bracis-19036	25	3	,	,	PUNCT
bracis-19036	25	4	one	one	PRON
bracis-19036	25	5	can	can	AUX
bracis-19036	25	6	find	find	VERB
bracis-19036	25	7	the	the	DET
bracis-19036	25	8	application	application	NOUN
bracis-19036	25	9	of	of	ADP
bracis-19036	25	10	genetic	genetic	ADJ
bracis-19036	25	11	programming	programming	NOUN
bracis-19036	25	12	and	and	CCONJ
bracis-19036	25	13	evolutionary	evolutionary	ADJ
bracis-19036	25	14	strategies	strategy	NOUN
bracis-19036	25	15	in	in	ADP
bracis-19036	25	16	this	this	DET
bracis-19036	25	17	context	context	NOUN
bracis-19036	25	18	 	 	SPACE
bracis-19036	26	1	[	[	X
bracis-19036	26	2	15	15	NUM
bracis-19036	26	3	,	,	PUNCT
bracis-19036	26	4	26	26	NUM
bracis-19036	26	5	]	]	PUNCT
bracis-19036	26	6	.	.	PUNCT
bracis-19036	27	1	grns	grn	NOUN
bracis-19036	27	2	can	can	AUX
bracis-19036	27	3	be	be	AUX
bracis-19036	27	4	modeled	model	VERB
bracis-19036	27	5	as	as	ADP
bracis-19036	27	6	continuous	continuous	ADJ
bracis-19036	27	7	models	model	NOUN
bracis-19036	27	8	in	in	ADP
bracis-19036	27	9	the	the	DET
bracis-19036	27	10	form	form	NOUN
bracis-19036	27	11	of	of	ADP
bracis-19036	27	12	differential	differential	ADJ
bracis-19036	27	13	equations	equation	NOUN
bracis-19036	27	14	or	or	CCONJ
bracis-19036	27	15	as	as	ADP
bracis-19036	27	16	discrete	discrete	ADJ
bracis-19036	27	17	models	model	NOUN
bracis-19036	27	18	,	,	PUNCT
bracis-19036	27	19	such	such	ADJ
bracis-19036	27	20	as	as	ADP
bracis-19036	27	21	bayesian	bayesian	NOUN
bracis-19036	27	22	and	and	CCONJ
bracis-19036	27	23	boolean	boolean	ADJ
bracis-19036	27	24	networks	network	NOUN
bracis-19036	27	25	.	.	PUNCT
bracis-19036	28	1	for	for	ADP
bracis-19036	28	2	discrete	discrete	ADJ
bracis-19036	28	3	models	model	NOUN
bracis-19036	28	4	,	,	PUNCT
bracis-19036	28	5	a	a	DET
bracis-19036	28	6	common	common	ADJ
bracis-19036	28	7	scheme	scheme	NOUN
bracis-19036	28	8	for	for	ADP
bracis-19036	28	9	representing	represent	VERB
bracis-19036	28	10	the	the	DET
bracis-19036	28	11	genes	gene	NOUN
bracis-19036	28	12	’	'	PUNCT
bracis-19036	28	13	interactions	interaction	NOUN
bracis-19036	28	14	is	be	AUX
bracis-19036	28	15	an	an	DET
bracis-19036	28	16	alphabet	alphabet	NOUN
bracis-19036	28	17	of	of	ADP
bracis-19036	28	18	two	two	NUM
bracis-19036	28	19	symbols	symbol	NOUN
bracis-19036	28	20	\(\gamma	\(\gamma	PUNCT
bracis-19036	28	21	\	\	NOUN
bracis-19036	28	22	)	)	PUNCT
bracis-19036	29	1	=	=	SYM
bracis-19036	29	2	{	{	PUNCT
bracis-19036	29	3	0,1	0,1	NUM
bracis-19036	29	4	}	}	PUNCT
bracis-19036	29	5	,	,	PUNCT
bracis-19036	29	6	where	where	SCONJ
bracis-19036	29	7	0	0	NUM
bracis-19036	29	8	means	mean	VERB
bracis-19036	29	9	inhibition	inhibition	NOUN
bracis-19036	29	10	and	and	CCONJ
bracis-19036	29	11	1	1	NUM
bracis-19036	29	12	means	mean	VERB
bracis-19036	29	13	activation	activation	NOUN
bracis-19036	29	14	.	.	PUNCT
bracis-19036	30	1	a	a	DET
bracis-19036	30	2	model	model	NOUN
bracis-19036	30	3	for	for	ADP
bracis-19036	30	4	this	this	DET
bracis-19036	30	5	type	type	NOUN
bracis-19036	30	6	of	of	ADP
bracis-19036	30	7	network	network	NOUN
bracis-19036	30	8	is	be	AUX
bracis-19036	30	9	similar	similar	ADJ
bracis-19036	30	10	to	to	ADP
bracis-19036	30	11	digital	digital	ADJ
bracis-19036	30	12	circuits	circuit	NOUN
bracis-19036	30	13	,	,	PUNCT
bracis-19036	30	14	which	which	PRON
bracis-19036	30	15	can	can	AUX
bracis-19036	30	16	be	be	AUX
bracis-19036	30	17	evolved	evolve	VERB
bracis-19036	30	18	using	use	VERB
bracis-19036	30	19	cartesian	cartesian	ADJ
bracis-19036	30	20	genetic	genetic	ADJ
bracis-19036	30	21	programming	programming	NOUN
bracis-19036	30	22	(	(	PUNCT
bracis-19036	30	23	cgp	cgp	PROPN
bracis-19036	30	24	)	)	PUNCT
bracis-19036	30	25	 	 	SPACE
bracis-19036	31	1	[	[	X
bracis-19036	31	2	18	18	NUM
bracis-19036	31	3	]	]	X
bracis-19036	31	4	,	,	PUNCT
bracis-19036	31	5	as	as	SCONJ
bracis-19036	31	6	presented	present	VERB
bracis-19036	31	7	in	in	ADP
bracis-19036	31	8	 	 	SPACE
bracis-19036	31	9	[	[	X
bracis-19036	31	10	24	24	NUM
bracis-19036	31	11	,	,	PUNCT
bracis-19036	31	12	25	25	NUM
bracis-19036	31	13	]	]	PUNCT
bracis-19036	31	14	.	.	PUNCT
bracis-19036	32	1	although	although	SCONJ
bracis-19036	32	2	it	it	PRON
bracis-19036	32	3	is	be	AUX
bracis-19036	32	4	possible	possible	ADJ
bracis-19036	32	5	to	to	PART
bracis-19036	32	6	use	use	VERB
bracis-19036	32	7	recombination	recombination	NOUN
bracis-19036	32	8	operators	operator	NOUN
bracis-19036	32	9	,	,	PUNCT
bracis-19036	32	10	cgp	cgp	PROPN
bracis-19036	32	11	mostly	mostly	ADV
bracis-19036	32	12	uses	use	VERB
bracis-19036	32	13	mutation	mutation	NOUN
bracis-19036	32	14	operators	operator	NOUN
bracis-19036	32	15	to	to	PART
bracis-19036	32	16	create	create	VERB
bracis-19036	32	17	genetic	genetic	ADJ
bracis-19036	32	18	variation	variation	NOUN
bracis-19036	32	19	in	in	ADP
bracis-19036	32	20	its	its	PRON
bracis-19036	32	21	offspring	offspring	NOUN
bracis-19036	32	22	.	.	PUNCT
bracis-19036	33	1	there	there	PRON
bracis-19036	33	2	is	be	VERB
bracis-19036	33	3	no	no	DET
bracis-19036	33	4	general	general	ADJ
bracis-19036	33	5	-	-	PUNCT
bracis-19036	33	6	purpose	purpose	NOUN
bracis-19036	33	7	crossover	crossover	NOUN
bracis-19036	33	8	operator	operator	NOUN
bracis-19036	33	9	with	with	ADP
bracis-19036	33	10	good	good	ADJ
bracis-19036	33	11	performance	performance	NOUN
bracis-19036	33	12	for	for	ADP
bracis-19036	33	13	cgp	cgp	PROPN
bracis-19036	33	14	 	 	SPACE
bracis-19036	33	15	[	[	X
bracis-19036	33	16	17	17	NUM
bracis-19036	33	17	]	]	PUNCT
bracis-19036	33	18	.	.	PUNCT
bracis-19036	34	1	point	point	NOUN
bracis-19036	34	2	-	-	PUNCT
bracis-19036	34	3	mutation	mutation	NOUN
bracis-19036	34	4	,	,	PUNCT
bracis-19036	34	5	in	in	ADP
bracis-19036	34	6	which	which	PRON
bracis-19036	34	7	a	a	DET
bracis-19036	34	8	gene	gene	NOUN
bracis-19036	34	9	is	be	AUX
bracis-19036	34	10	randomly	randomly	ADV
bracis-19036	34	11	chosen	choose	VERB
bracis-19036	34	12	and	and	CCONJ
bracis-19036	34	13	changed	change	VERB
bracis-19036	34	14	to	to	ADP
bracis-19036	34	15	another	another	DET
bracis-19036	34	16	value	value	NOUN
bracis-19036	34	17	,	,	PUNCT
bracis-19036	34	18	and	and	CCONJ
bracis-19036	34	19	single	single	ADJ
bracis-19036	34	20	active	active	ADJ
bracis-19036	34	21	mutation	mutation	NOUN
bracis-19036	34	22	(	(	PUNCT
bracis-19036	34	23	sam	sam	PROPN
bracis-19036	34	24	)	)	PUNCT
bracis-19036	34	25	 	 	SPACE
bracis-19036	35	1	[	[	X
bracis-19036	35	2	9	9	X
bracis-19036	35	3	]	]	PUNCT
bracis-19036	35	4	that	that	PRON
bracis-19036	35	5	guarantees	guarantee	VERB
bracis-19036	35	6	a	a	DET
bracis-19036	35	7	phenotypic	phenotypic	ADJ
bracis-19036	35	8	difference	difference	NOUN
bracis-19036	35	9	after	after	ADP
bracis-19036	35	10	the	the	DET
bracis-19036	35	11	mutation	mutation	NOUN
bracis-19036	35	12	,	,	PUNCT
bracis-19036	35	13	are	be	AUX
bracis-19036	35	14	two	two	NUM
bracis-19036	35	15	common	common	ADJ
bracis-19036	35	16	mutation	mutation	NOUN
bracis-19036	35	17	approaches	approach	NOUN
bracis-19036	35	18	used	use	VERB
bracis-19036	35	19	on	on	ADP
bracis-19036	35	20	cgp	cgp	PROPN
bracis-19036	35	21	.	.	PUNCT
bracis-19036	36	1	recently	recently	ADV
bracis-19036	36	2	,	,	PUNCT
bracis-19036	36	3	the	the	DET
bracis-19036	36	4	semantically	semantically	ADV
bracis-19036	36	5	-	-	PUNCT
bracis-19036	36	6	oriented	orient	VERB
bracis-19036	36	7	mutation	mutation	NOUN
bracis-19036	36	8	operator	operator	NOUN
bracis-19036	36	9	(	(	PUNCT
bracis-19036	36	10	somo	somo	PROPN
bracis-19036	36	11	)	)	PUNCT
bracis-19036	36	12	was	be	AUX
bracis-19036	36	13	developed	develop	VERB
bracis-19036	36	14	for	for	ADP
bracis-19036	36	15	designing	design	VERB
bracis-19036	36	16	evolutionary	evolutionary	ADJ
bracis-19036	36	17	circuits	circuit	NOUN
bracis-19036	36	18	 	 	SPACE
bracis-19036	37	1	[	[	X
bracis-19036	37	2	11	11	NUM
bracis-19036	37	3	]	]	PUNCT
bracis-19036	37	4	.	.	PUNCT
bracis-19036	38	1	somo	somo	PROPN
bracis-19036	38	2	can	can	AUX
bracis-19036	38	3	obtain	obtain	VERB
bracis-19036	38	4	feasible	feasible	ADJ
bracis-19036	38	5	circuits	circuit	NOUN
bracis-19036	38	6	using	use	VERB
bracis-19036	38	7	less	less	ADV
bracis-19036	38	8	computational	computational	ADJ
bracis-19036	38	9	effort	effort	NOUN
bracis-19036	38	10	than	than	ADP
bracis-19036	38	11	other	other	ADJ
bracis-19036	38	12	approaches	approach	NOUN
bracis-19036	38	13	from	from	ADP
bracis-19036	38	14	the	the	DET
bracis-19036	38	15	literature	literature	NOUN
bracis-19036	38	16	,	,	PUNCT
bracis-19036	38	17	and	and	CCONJ
bracis-19036	38	18	this	this	DET
bracis-19036	38	19	advantage	advantage	NOUN
bracis-19036	38	20	helps	help	VERB
bracis-19036	38	21	to	to	PART
bracis-19036	38	22	deal	deal	VERB
bracis-19036	38	23	with	with	ADP
bracis-19036	38	24	the	the	DET
bracis-19036	38	25	scalability	scalability	NOUN
bracis-19036	38	26	limitation	limitation	NOUN
bracis-19036	38	27	of	of	ADP
bracis-19036	38	28	cgp	cgp	PROPN
bracis-19036	38	29	.	.	PUNCT
bracis-19036	39	1	however	however	ADV
bracis-19036	39	2	,	,	PUNCT
bracis-19036	39	3	somo	somo	PROPN
bracis-19036	39	4	uses	use	VERB
bracis-19036	39	5	only	only	ADV
bracis-19036	39	6	a	a	DET
bracis-19036	39	7	specific	specific	ADJ
bracis-19036	39	8	population	population	NOUN
bracis-19036	39	9	initialization	initialization	NOUN
bracis-19036	39	10	in	in	ADP
bracis-19036	39	11	order	order	NOUN
bracis-19036	39	12	to	to	PART
bracis-19036	39	13	optimize	optimize	VERB
bracis-19036	39	14	the	the	DET
bracis-19036	39	15	circuit	circuit	NOUN
bracis-19036	39	16	in	in	ADP
bracis-19036	39	17	terms	term	NOUN
bracis-19036	39	18	of	of	ADP
bracis-19036	39	19	reducing	reduce	VERB
bracis-19036	39	20	the	the	DET
bracis-19036	39	21	number	number	NOUN
bracis-19036	39	22	of	of	ADP
bracis-19036	39	23	logic	logic	NOUN
bracis-19036	39	24	elements	element	NOUN
bracis-19036	39	25	.	.	PUNCT
bracis-19036	40	1	there	there	PRON
bracis-19036	40	2	is	be	VERB
bracis-19036	40	3	not	not	PART
bracis-19036	40	4	a	a	DET
bracis-19036	40	5	proper	proper	ADJ
bracis-19036	40	6	optimization	optimization	NOUN
bracis-19036	40	7	step	step	NOUN
bracis-19036	40	8	.	.	PUNCT
bracis-19036	41	1	also	also	ADV
bracis-19036	41	2	,	,	PUNCT
bracis-19036	41	3	point	point	NOUN
bracis-19036	41	4	-	-	PUNCT
bracis-19036	41	5	mutation	mutation	NOUN
bracis-19036	41	6	has	have	VERB
bracis-19036	41	7	a	a	DET
bracis-19036	41	8	parameter	parameter	NOUN
bracis-19036	41	9	,	,	PUNCT
bracis-19036	41	10	\(\mu	\(\mu	PROPN
bracis-19036	41	11	_	_	PUNCT
bracis-19036	41	12	{	{	PUNCT
bracis-19036	41	13	r}\	r}\	NUM
bracis-19036	41	14	)	)	PUNCT
bracis-19036	41	15	,	,	PUNCT
bracis-19036	41	16	which	which	PRON
bracis-19036	41	17	defines	define	VERB
bracis-19036	41	18	the	the	DET
bracis-19036	41	19	percentage	percentage	NOUN
bracis-19036	41	20	of	of	ADP
bracis-19036	41	21	the	the	DET
bracis-19036	41	22	genotype	genotype	NOUN
bracis-19036	41	23	to	to	PART
bracis-19036	41	24	be	be	AUX
bracis-19036	41	25	mutated	mutate	VERB
bracis-19036	41	26	.	.	PUNCT
bracis-19036	42	1	somo	somo	PROPN
bracis-19036	42	2	,	,	PUNCT
bracis-19036	42	3	on	on	ADP
bracis-19036	42	4	the	the	DET
bracis-19036	42	5	other	other	ADJ
bracis-19036	42	6	hand	hand	NOUN
bracis-19036	42	7	,	,	PUNCT
bracis-19036	42	8	has	have	VERB
bracis-19036	42	9	more	more	ADJ
bracis-19036	42	10	sensitive	sensitive	ADJ
bracis-19036	42	11	parameters	parameter	NOUN
bracis-19036	42	12	that	that	PRON
bracis-19036	42	13	control	control	VERB
bracis-19036	42	14	the	the	DET
bracis-19036	42	15	genetic	genetic	ADJ
bracis-19036	42	16	variation	variation	NOUN
bracis-19036	42	17	of	of	ADP
bracis-19036	42	18	the	the	DET
bracis-19036	42	19	offspring	offspring	NOUN
bracis-19036	42	20	.	.	PUNCT
bracis-19036	43	1	therefore	therefore	ADV
bracis-19036	43	2	,	,	PUNCT
bracis-19036	43	3	in	in	ADP
bracis-19036	43	4	this	this	DET
bracis-19036	43	5	paper	paper	NOUN
bracis-19036	43	6	,	,	PUNCT
bracis-19036	43	7	we	we	PRON
bracis-19036	43	8	propose	propose	VERB
bracis-19036	43	9	the	the	DET
bracis-19036	43	10	evaluation	evaluation	NOUN
bracis-19036	43	11	and	and	CCONJ
bracis-19036	43	12	analysis	analysis	NOUN
bracis-19036	43	13	of	of	ADP
bracis-19036	43	14	cgp	cgp	PROPN
bracis-19036	43	15	when	when	SCONJ
bracis-19036	43	16	applied	apply	VERB
bracis-19036	43	17	to	to	ADP
bracis-19036	43	18	the	the	DET
bracis-19036	43	19	context	context	NOUN
bracis-19036	43	20	of	of	ADP
bracis-19036	43	21	the	the	DET
bracis-19036	43	22	gene	gene	NOUN
bracis-19036	43	23	regulation	regulation	NOUN
bracis-19036	43	24	networks	network	NOUN
bracis-19036	43	25	inference	inference	NOUN
bracis-19036	43	26	by	by	ADP
bracis-19036	43	27	using	use	VERB
bracis-19036	43	28	benchmark	benchmark	NOUN
bracis-19036	43	29	curated	curate	VERB
bracis-19036	43	30	models	model	NOUN
bracis-19036	43	31	with	with	ADP
bracis-19036	43	32	single	single	ADJ
bracis-19036	43	33	-	-	PUNCT
bracis-19036	43	34	cell	cell	NOUN
bracis-19036	43	35	rna	rna	NOUN
bracis-19036	43	36	-	-	PUNCT
bracis-19036	43	37	sequencing	sequence	VERB
bracis-19036	43	38	(	(	PUNCT
bracis-19036	43	39	scrna	scrna	NOUN
bracis-19036	43	40	-	-	PUNCT
bracis-19036	43	41	seq	seq	NOUN
bracis-19036	43	42	)	)	PUNCT
bracis-19036	43	43	time	time	NOUN
bracis-19036	43	44	-	-	PUNCT
bracis-19036	43	45	series	series	NOUN
bracis-19036	43	46	gene	gene	NOUN
bracis-19036	43	47	expression	expression	NOUN
bracis-19036	43	48	data	datum	NOUN
bracis-19036	43	49	technology	technology	NOUN
bracis-19036	43	50	.	.	PUNCT
bracis-19036	44	1	here	here	ADV
bracis-19036	44	2	,	,	PUNCT
bracis-19036	44	3	we	we	PRON
bracis-19036	44	4	provide	provide	VERB
bracis-19036	44	5	a	a	DET
bracis-19036	44	6	critical	critical	ADJ
bracis-19036	44	7	assessment	assessment	NOUN
bracis-19036	44	8	of	of	ADP
bracis-19036	44	9	the	the	DET
bracis-19036	44	10	advantages	advantage	NOUN
bracis-19036	44	11	and	and	CCONJ
bracis-19036	44	12	disadvantages	disadvantage	NOUN
bracis-19036	44	13	of	of	ADP
bracis-19036	44	14	using	use	VERB
bracis-19036	44	15	somo	somo	NOUN
bracis-19036	44	16	,	,	PUNCT
bracis-19036	44	17	with	with	ADP
bracis-19036	44	18	and	and	CCONJ
bracis-19036	44	19	without	without	ADP
bracis-19036	44	20	an	an	DET
bracis-19036	44	21	appropriate	appropriate	ADJ
bracis-19036	44	22	optimization	optimization	NOUN
bracis-19036	44	23	scheme	scheme	NOUN
bracis-19036	44	24	with	with	ADP
bracis-19036	44	25	sam	sam	PROPN
bracis-19036	44	26	.	.	PUNCT
bracis-19036	45	1	furthermore	furthermore	ADV
bracis-19036	45	2	,	,	PUNCT
bracis-19036	45	3	we	we	PRON
bracis-19036	45	4	perform	perform	VERB
bracis-19036	45	5	a	a	DET
bracis-19036	45	6	parameter	parameter	NOUN
bracis-19036	45	7	sensitivity	sensitivity	NOUN
bracis-19036	45	8	analysis	analysis	NOUN
bracis-19036	45	9	of	of	ADP
bracis-19036	45	10	somo	somo	NOUN
bracis-19036	45	11	.	.	PUNCT
bracis-19036	46	1	also	also	ADV
bracis-19036	46	2	,	,	PUNCT
bracis-19036	46	3	the	the	DET
bracis-19036	46	4	results	result	NOUN
bracis-19036	46	5	obtained	obtain	VERB
bracis-19036	46	6	by	by	ADP
bracis-19036	46	7	the	the	DET
bracis-19036	46	8	proposal	proposal	NOUN
bracis-19036	46	9	in	in	ADP
bracis-19036	46	10	the	the	DET
bracis-19036	46	11	computational	computational	ADJ
bracis-19036	46	12	experiments	experiment	NOUN
bracis-19036	46	13	are	be	AUX
bracis-19036	46	14	better	well	ADJ
bracis-19036	46	15	than	than	ADP
bracis-19036	46	16	those	those	PRON
bracis-19036	46	17	found	find	VERB
bracis-19036	46	18	by	by	ADP
bracis-19036	46	19	other	other	ADJ
bracis-19036	46	20	gp	gp	NOUN
bracis-19036	46	21	approaches	approach	NOUN
bracis-19036	46	22	and	and	CCONJ
bracis-19036	46	23	similar	similar	ADJ
bracis-19036	46	24	to	to	ADP
bracis-19036	46	25	those	those	PRON
bracis-19036	46	26	reached	reach	VERB
bracis-19036	46	27	by	by	ADP
bracis-19036	46	28	the	the	DET
bracis-19036	46	29	state	state	NOUN
bracis-19036	46	30	-	-	PUNCT
bracis-19036	46	31	of	of	ADP
bracis-19036	46	32	-	-	PUNCT
bracis-19036	46	33	the	the	DET
bracis-19036	46	34	-	-	PUNCT
bracis-19036	46	35	art	art	NOUN
bracis-19036	46	36	algorithm	algorithm	NOUN
bracis-19036	46	37	genie3	genie3	NOUN
bracis-19036	46	38	,	,	PUNCT
bracis-19036	46	39	one	one	NUM
bracis-19036	46	40	of	of	ADP
bracis-19036	46	41	the	the	DET
bracis-19036	46	42	techniques	technique	NOUN
bracis-19036	46	43	more	more	ADV
bracis-19036	46	44	widely	widely	ADV
bracis-19036	46	45	used	use	VERB
bracis-19036	46	46	in	in	ADP
bracis-19036	46	47	the	the	DET
bracis-19036	46	48	literature	literature	NOUN
bracis-19036	46	49	for	for	ADP
bracis-19036	46	50	modeling	model	VERB
bracis-19036	46	51	grns	grn	NOUN
bracis-19036	46	52	.	.	PUNCT
bracis-19036	47	1	our	our	PRON
bracis-19036	47	2	results	result	NOUN
bracis-19036	47	3	show	show	VERB
bracis-19036	47	4	that	that	SCONJ
bracis-19036	47	5	it	it	PRON
bracis-19036	47	6	is	be	AUX
bracis-19036	47	7	important	important	ADJ
bracis-19036	47	8	to	to	PART
bracis-19036	47	9	have	have	VERB
bracis-19036	47	10	an	an	DET
bracis-19036	47	11	optimization	optimization	NOUN
bracis-19036	47	12	step	step	NOUN
bracis-19036	47	13	to	to	PART
bracis-19036	47	14	obtain	obtain	VERB
bracis-19036	47	15	correct	correct	ADJ
bracis-19036	47	16	grns	grn	NOUN
bracis-19036	47	17	and	and	CCONJ
bracis-19036	47	18	that	that	DET
bracis-19036	47	19	somo	somo	NOUN
bracis-19036	47	20	is	be	AUX
bracis-19036	47	21	very	very	ADV
bracis-19036	47	22	sensitive	sensitive	ADJ
bracis-19036	47	23	to	to	ADP
bracis-19036	47	24	its	its	PRON
bracis-19036	47	25	parameters	parameter	NOUN
bracis-19036	47	26	.	.	PUNCT
bracis-19036	48	1	2	2	NUM
bracis-19036	48	2	problem	problem	NOUN
bracis-19036	48	3	definition	definition	NOUN
bracis-19036	48	4	the	the	DET
bracis-19036	48	5	usual	usual	ADJ
bracis-19036	48	6	research	research	NOUN
bracis-19036	48	7	aim	aim	NOUN
bracis-19036	48	8	is	be	AUX
bracis-19036	48	9	to	to	PART
bracis-19036	48	10	infer	infer	VERB
bracis-19036	48	11	the	the	DET
bracis-19036	48	12	network	network	NOUN
bracis-19036	48	13	topology	topology	NOUN
bracis-19036	48	14	from	from	ADP
bracis-19036	48	15	given	give	VERB
bracis-19036	48	16	gene	gene	NOUN
bracis-19036	48	17	expression	expression	NOUN
bracis-19036	48	18	data	datum	NOUN
bracis-19036	48	19	 	 	SPACE
bracis-19036	49	1	[	[	X
bracis-19036	49	2	1	1	NUM
bracis-19036	49	3	]	]	PUNCT
bracis-19036	49	4	.	.	PUNCT
bracis-19036	50	1	the	the	DET
bracis-19036	50	2	gene	gene	NOUN
bracis-19036	50	3	expression	expression	NOUN
bracis-19036	50	4	data	datum	NOUN
bracis-19036	50	5	can	can	AUX
bracis-19036	50	6	be	be	AUX
bracis-19036	50	7	given	give	VERB
bracis-19036	50	8	as	as	ADP
bracis-19036	50	9	a	a	DET
bracis-19036	50	10	steady	steady	ADJ
bracis-19036	50	11	-	-	PUNCT
bracis-19036	50	12	state	state	NOUN
bracis-19036	50	13	or	or	CCONJ
bracis-19036	50	14	time	time	NOUN
bracis-19036	50	15	-	-	PUNCT
bracis-19036	50	16	series	series	NOUN
bracis-19036	50	17	matrix	matrix	NOUN
bracis-19036	50	18	.	.	PUNCT
bracis-19036	51	1	for	for	ADP
bracis-19036	51	2	the	the	DET
bracis-19036	51	3	former	former	ADJ
bracis-19036	51	4	,	,	PUNCT
bracis-19036	51	5	each	each	DET
bracis-19036	51	6	measure	measure	NOUN
bracis-19036	51	7	represents	represent	VERB
bracis-19036	51	8	the	the	DET
bracis-19036	51	9	expression	expression	NOUN
bracis-19036	51	10	level	level	NOUN
bracis-19036	51	11	of	of	ADP
bracis-19036	51	12	a	a	DET
bracis-19036	51	13	given	give	VERB
bracis-19036	51	14	gene	gene	NOUN
bracis-19036	51	15	in	in	ADP
bracis-19036	51	16	a	a	DET
bracis-19036	51	17	certain	certain	ADJ
bracis-19036	51	18	condition	condition	NOUN
bracis-19036	51	19	and	and	CCONJ
bracis-19036	51	20	,	,	PUNCT
bracis-19036	51	21	for	for	ADP
bracis-19036	51	22	the	the	DET
bracis-19036	51	23	latter	latter	ADJ
bracis-19036	51	24	,	,	PUNCT
bracis-19036	51	25	the	the	DET
bracis-19036	51	26	gene	gene	NOUN
bracis-19036	51	27	expression	expression	NOUN
bracis-19036	51	28	measurements	measurement	NOUN
bracis-19036	51	29	is	be	AUX
bracis-19036	51	30	carried	carry	VERB
bracis-19036	51	31	out	out	ADP
bracis-19036	51	32	in	in	ADP
bracis-19036	51	33	each	each	DET
bracis-19036	51	34	time	time	NOUN
bracis-19036	51	35	point	point	NOUN
bracis-19036	51	36	.	.	PUNCT
bracis-19036	52	1	considering	consider	VERB
bracis-19036	52	2	n	n	CCONJ
bracis-19036	52	3	the	the	DET
bracis-19036	52	4	total	total	ADJ
bracis-19036	52	5	number	number	NOUN
bracis-19036	52	6	of	of	ADP
bracis-19036	52	7	genes	gene	NOUN
bracis-19036	52	8	and	and	CCONJ
bracis-19036	52	9	s	s	VERB
bracis-19036	52	10	the	the	DET
bracis-19036	52	11	total	total	ADJ
bracis-19036	52	12	number	number	NOUN
bracis-19036	52	13	of	of	ADP
bracis-19036	52	14	time	time	NOUN
bracis-19036	52	15	-	-	PUNCT
bracis-19036	52	16	points	point	NOUN
bracis-19036	52	17	measured	measure	VERB
bracis-19036	52	18	,	,	PUNCT
bracis-19036	52	19	a	a	DET
bracis-19036	52	20	gene	gene	NOUN
bracis-19036	52	21	expression	expression	NOUN
bracis-19036	52	22	dataset	dataset	NOUN
bracis-19036	52	23	is	be	AUX
bracis-19036	52	24	represented	represent	VERB
bracis-19036	52	25	by	by	ADP
bracis-19036	52	26	a	a	DET
bracis-19036	52	27	s	s	NOUN
bracis-19036	52	28	x	x	NOUN
bracis-19036	52	29	n	n	PRON
bracis-19036	52	30	matrix	matrix	NOUN
bracis-19036	52	31	,	,	PUNCT
bracis-19036	52	32	where	where	SCONJ
bracis-19036	52	33	each	each	DET
bracis-19036	52	34	row	row	NOUN
bracis-19036	52	35	vector	vector	NOUN
bracis-19036	52	36	s	s	PART
bracis-19036	52	37	(	(	PUNCT
bracis-19036	52	38	s	s	NOUN
bracis-19036	52	39	=	=	SYM
bracis-19036	52	40	1	1	NUM
bracis-19036	52	41	,	,	PUNCT
bracis-19036	52	42	...	...	PUNCT
bracis-19036	52	43	,	,	PUNCT
bracis-19036	52	44	s	s	X
bracis-19036	52	45	)	)	PUNCT
bracis-19036	52	46	represents	represent	VERB
bracis-19036	52	47	a	a	DET
bracis-19036	52	48	n	n	ADV
bracis-19036	52	49	-	-	PUNCT
bracis-19036	52	50	dimensional	dimensional	ADJ
bracis-19036	52	51	transcriptome	transcriptome	NOUN
bracis-19036	52	52	,	,	PUNCT
bracis-19036	52	53	and	and	CCONJ
bracis-19036	52	54	each	each	DET
bracis-19036	52	55	column	column	NOUN
bracis-19036	52	56	vector	vector	NOUN
bracis-19036	52	57	y	y	PROPN
bracis-19036	52	58	(	(	PUNCT
bracis-19036	52	59	y	y	NOUN
bracis-19036	52	60	=	=	SYM
bracis-19036	52	61	1	1	NUM
bracis-19036	52	62	,	,	PUNCT
bracis-19036	52	63	...	...	PUNCT
bracis-19036	52	64	,	,	PUNCT
bracis-19036	52	65	n	n	CCONJ
bracis-19036	52	66	)	)	PUNCT
bracis-19036	52	67	corresponds	correspond	VERB
bracis-19036	52	68	to	to	ADP
bracis-19036	52	69	a	a	DET
bracis-19036	52	70	s	s	ADV
bracis-19036	52	71	-	-	ADJ
bracis-19036	52	72	dimensional	dimensional	ADJ
bracis-19036	52	73	gene	gene	NOUN
bracis-19036	52	74	profile	profile	NOUN
bracis-19036	52	75	in	in	ADP
bracis-19036	52	76	the	the	DET
bracis-19036	52	77	total	total	ADJ
bracis-19036	52	78	cell	cell	NOUN
bracis-19036	52	79	population	population	NOUN
bracis-19036	52	80	 	 	SPACE
bracis-19036	53	1	[	[	X
bracis-19036	53	2	4	4	NUM
bracis-19036	53	3	]	]	PUNCT
bracis-19036	53	4	.	.	PUNCT
bracis-19036	54	1	the	the	DET
bracis-19036	54	2	goal	goal	NOUN
bracis-19036	54	3	of	of	ADP
bracis-19036	54	4	the	the	DET
bracis-19036	54	5	network	network	NOUN
bracis-19036	54	6	inference	inference	NOUN
bracis-19036	54	7	method	method	NOUN
bracis-19036	54	8	is	be	AUX
bracis-19036	54	9	to	to	PART
bracis-19036	54	10	use	use	VERB
bracis-19036	54	11	the	the	DET
bracis-19036	54	12	data	data	NOUN
bracis-19036	54	13	matrix	matrix	NOUN
bracis-19036	54	14	to	to	PART
bracis-19036	54	15	predict	predict	VERB
bracis-19036	54	16	a	a	DET
bracis-19036	54	17	set	set	NOUN
bracis-19036	54	18	of	of	ADP
bracis-19036	54	19	regulatory	regulatory	ADJ
bracis-19036	54	20	interactions	interaction	NOUN
bracis-19036	54	21	between	between	ADP
bracis-19036	54	22	any	any	DET
bracis-19036	54	23	two	two	NUM
bracis-19036	54	24	genes	gene	NOUN
bracis-19036	54	25	from	from	ADP
bracis-19036	54	26	the	the	DET
bracis-19036	54	27	total	total	NOUN
bracis-19036	54	28	of	of	ADP
bracis-19036	54	29	n	n	PRON
bracis-19036	54	30	genes	gene	NOUN
bracis-19036	54	31	.	.	PUNCT
bracis-19036	55	1	the	the	DET
bracis-19036	55	2	final	final	ADJ
bracis-19036	55	3	output	output	NOUN
bracis-19036	55	4	is	be	AUX
bracis-19036	55	5	in	in	ADP
bracis-19036	55	6	the	the	DET
bracis-19036	55	7	form	form	NOUN
bracis-19036	55	8	of	of	ADP
bracis-19036	55	9	a	a	DET
bracis-19036	55	10	graph	graph	NOUN
bracis-19036	55	11	with	with	ADP
bracis-19036	55	12	n	n	ADP
bracis-19036	55	13	nodes	node	NOUN
bracis-19036	55	14	and	and	CCONJ
bracis-19036	55	15	a	a	DET
bracis-19036	55	16	set	set	NOUN
bracis-19036	55	17	of	of	ADP
bracis-19036	55	18	edges	edge	NOUN
bracis-19036	55	19	 	 	SPACE
bracis-19036	55	20	[	[	X
bracis-19036	55	21	4	4	NUM
bracis-19036	55	22	]	]	PUNCT
bracis-19036	55	23	.	.	PUNCT
bracis-19036	56	1	figure	figure	NOUN
bracis-19036	56	2	 	 	SPACE
bracis-19036	56	3	1a	1a	PROPN
bracis-19036	56	4	shows	show	VERB
bracis-19036	56	5	an	an	DET
bracis-19036	56	6	example	example	NOUN
bracis-19036	56	7	of	of	ADP
bracis-19036	56	8	a	a	DET
bracis-19036	56	9	grn	grn	PROPN
bracis-19036	56	10	with	with	ADP
bracis-19036	56	11	four	four	NUM
bracis-19036	56	12	genes	gene	NOUN
bracis-19036	56	13	(	(	PUNCT
bracis-19036	56	14	nodes	node	NOUN
bracis-19036	56	15	)	)	PUNCT
bracis-19036	56	16	and	and	CCONJ
bracis-19036	56	17	their	their	PRON
bracis-19036	56	18	regulatory	regulatory	ADJ
bracis-19036	56	19	relationships	relationship	NOUN
bracis-19036	56	20	(	(	PUNCT
bracis-19036	56	21	edges	edge	NOUN
bracis-19036	56	22	)	)	PUNCT
bracis-19036	56	23	.	.	PUNCT
bracis-19036	57	1	blue	blue	PROPN
bracis-19036	57	2	pointed	point	VERB
bracis-19036	57	3	arrows	arrow	NOUN
bracis-19036	57	4	represent	represent	VERB
bracis-19036	57	5	an	an	DET
bracis-19036	57	6	activation	activation	NOUN
bracis-19036	57	7	and	and	CCONJ
bracis-19036	57	8	orange	orange	NOUN
bracis-19036	57	9	lines	line	NOUN
bracis-19036	57	10	,	,	PUNCT
bracis-19036	57	11	inhibition	inhibition	NOUN
bracis-19036	57	12	.	.	PUNCT
bracis-19036	58	1	for	for	ADP
bracis-19036	58	2	example	example	NOUN
bracis-19036	58	3	,	,	PUNCT
bracis-19036	58	4	g1	g1	PROPN
bracis-19036	58	5	activates	activate	VERB
bracis-19036	58	6	g2	g2	PROPN
bracis-19036	58	7	,	,	PUNCT
bracis-19036	58	8	and	and	CCONJ
bracis-19036	58	9	g4	g4	NOUN
bracis-19036	58	10	inhibits	inhibit	VERB
bracis-19036	58	11	g3	g3	PROPN
bracis-19036	58	12	.	.	PUNCT
bracis-19036	58	13	fig	fig	NOUN
bracis-19036	58	14	.	.	PUNCT
bracis-19036	59	1	1	1	X
bracis-19036	59	2	.	.	X
bracis-19036	59	3	illustrations	illustration	NOUN
bracis-19036	59	4	of	of	ADP
bracis-19036	59	5	a	a	DET
bracis-19036	59	6	grn	grn	PROPN
bracis-19036	59	7	with	with	ADP
bracis-19036	59	8	four	four	NUM
bracis-19036	59	9	genes	gene	NOUN
bracis-19036	59	10	(	(	PUNCT
bracis-19036	59	11	g1	g1	NOUN
bracis-19036	59	12	-	-	PUNCT
bracis-19036	59	13	g4	g4	NOUN
bracis-19036	59	14	)	)	PUNCT
bracis-19036	59	15	(	(	PUNCT
bracis-19036	59	16	a	a	X
bracis-19036	59	17	)	)	PUNCT
bracis-19036	59	18	and	and	CCONJ
bracis-19036	59	19	an	an	DET
bracis-19036	59	20	individual	individual	NOUN
bracis-19036	59	21	of	of	ADP
bracis-19036	59	22	cgp	cgp	PROPN
bracis-19036	59	23	(	(	PUNCT
bracis-19036	59	24	b	b	NOUN
bracis-19036	59	25	)	)	PUNCT
bracis-19036	59	26	.	.	PUNCT
bracis-19036	60	1	the	the	DET
bracis-19036	60	2	representation	representation	NOUN
bracis-19036	60	3	is	be	AUX
bracis-19036	60	4	composed	compose	VERB
bracis-19036	60	5	by	by	ADP
bracis-19036	60	6	three	three	NUM
bracis-19036	60	7	primary	primary	ADJ
bracis-19036	60	8	inputs	input	NOUN
bracis-19036	60	9	(	(	PUNCT
bracis-19036	60	10	i0	i0	PROPN
bracis-19036	60	11	,	,	PUNCT
bracis-19036	60	12	i1	i1	PROPN
bracis-19036	60	13	,	,	PUNCT
bracis-19036	60	14	and	and	CCONJ
bracis-19036	60	15	i2	i2	PROPN
bracis-19036	60	16	)	)	PUNCT
bracis-19036	60	17	and	and	CCONJ
bracis-19036	60	18	one	one	NUM
bracis-19036	60	19	output	output	NOUN
bracis-19036	60	20	(	(	PUNCT
bracis-19036	60	21	o0	o0	NOUN
bracis-19036	60	22	)	)	PUNCT
bracis-19036	60	23	.	.	PUNCT
bracis-19036	61	1	continuous	continuous	ADJ
bracis-19036	61	2	lines	line	NOUN
bracis-19036	61	3	defines	define	VERB
bracis-19036	61	4	the	the	DET
bracis-19036	61	5	phenotype	phenotype	NOUN
bracis-19036	61	6	.	.	PUNCT
bracis-19036	62	1	in	in	ADP
bracis-19036	62	2	this	this	DET
bracis-19036	62	3	representation	representation	NOUN
bracis-19036	62	4	,	,	PUNCT
bracis-19036	62	5	\(n_{c}\	\(n_{c}\	PROPN
bracis-19036	62	6	)	)	PUNCT
bracis-19036	62	7	=	=	SYM
bracis-19036	62	8	\(n_{r}\	\(n_{r}\	PROPN
bracis-19036	62	9	)	)	PUNCT
bracis-19036	62	10	=	=	SYM
bracis-19036	62	11	3	3	NUM
bracis-19036	62	12	and	and	CCONJ
bracis-19036	62	13	the	the	DET
bracis-19036	62	14	function	function	NOUN
bracis-19036	62	15	set	set	VERB
bracis-19036	62	16	\(\gamma	\(\gamma	NOUN
bracis-19036	62	17	\	\	NOUN
bracis-19036	62	18	)	)	PUNCT
bracis-19036	62	19	=	=	PRON
bracis-19036	62	20	{	{	PUNCT
bracis-19036	62	21	and	and	CCONJ
bracis-19036	62	22	,	,	PUNCT
bracis-19036	62	23	or	or	CCONJ
bracis-19036	62	24	,	,	PUNCT
bracis-19036	62	25	not	not	PART
bracis-19036	62	26	,	,	PUNCT
bracis-19036	62	27	xor	xor	PROPN
bracis-19036	62	28	}	}	PUNCT
bracis-19036	62	29	.	.	PUNCT
bracis-19036	63	1	full	full	ADJ
bracis-19036	63	2	size	size	NOUN
bracis-19036	63	3	image	image	NOUN
bracis-19036	63	4	discrete	discrete	ADJ
bracis-19036	63	5	and	and	CCONJ
bracis-19036	63	6	continuous	continuous	ADJ
bracis-19036	63	7	models	model	NOUN
bracis-19036	63	8	of	of	ADP
bracis-19036	63	9	grns	grn	NOUN
bracis-19036	63	10	are	be	AUX
bracis-19036	63	11	often	often	ADV
bracis-19036	63	12	used	use	VERB
bracis-19036	63	13	to	to	PART
bracis-19036	63	14	understand	understand	VERB
bracis-19036	63	15	the	the	DET
bracis-19036	63	16	process	process	NOUN
bracis-19036	63	17	.	.	PUNCT
bracis-19036	64	1	when	when	SCONJ
bracis-19036	64	2	considering	consider	VERB
bracis-19036	64	3	continuous	continuous	ADJ
bracis-19036	64	4	models	model	NOUN
bracis-19036	64	5	,	,	PUNCT
bracis-19036	64	6	it	it	PRON
bracis-19036	64	7	is	be	AUX
bracis-19036	64	8	common	common	ADJ
bracis-19036	64	9	to	to	PART
bracis-19036	64	10	use	use	VERB
bracis-19036	64	11	differential	differential	ADJ
bracis-19036	64	12	equations	equation	NOUN
bracis-19036	64	13	to	to	PART
bracis-19036	64	14	model	model	VERB
bracis-19036	64	15	the	the	DET
bracis-19036	64	16	regulatory	regulatory	ADJ
bracis-19036	64	17	relationships	relationship	NOUN
bracis-19036	64	18	between	between	ADP
bracis-19036	64	19	genes	gene	NOUN
bracis-19036	64	20	,	,	PUNCT
bracis-19036	64	21	such	such	ADJ
bracis-19036	64	22	as	as	SCONJ
bracis-19036	64	23	presented	present	VERB
bracis-19036	64	24	in	in	ADP
bracis-19036	64	25	 	 	SPACE
bracis-19036	64	26	[	[	X
bracis-19036	64	27	8	8	NUM
bracis-19036	64	28	,	,	PUNCT
bracis-19036	64	29	24	24	NUM
bracis-19036	64	30	]	]	PUNCT
bracis-19036	64	31	.	.	PUNCT
bracis-19036	65	1	this	this	DET
bracis-19036	65	2	type	type	NOUN
bracis-19036	65	3	of	of	ADP
bracis-19036	65	4	model	model	NOUN
bracis-19036	65	5	uses	use	VERB
bracis-19036	65	6	the	the	DET
bracis-19036	65	7	concentrations	concentration	NOUN
bracis-19036	65	8	of	of	ADP
bracis-19036	65	9	the	the	DET
bracis-19036	65	10	macromolecules	macromolecule	NOUN
bracis-19036	65	11	such	such	ADJ
bracis-19036	65	12	as	as	ADP
bracis-19036	65	13	rnas	rna	NOUN
bracis-19036	65	14	and	and	CCONJ
bracis-19036	65	15	proteins	protein	NOUN
bracis-19036	65	16	(	(	PUNCT
bracis-19036	65	17	both	both	PRON
bracis-19036	65	18	are	be	AUX
bracis-19036	65	19	gene	gene	NOUN
bracis-19036	65	20	products	product	NOUN
bracis-19036	65	21	)	)	PUNCT
bracis-19036	65	22	and	and	CCONJ
bracis-19036	65	23	other	other	ADJ
bracis-19036	65	24	biological	biological	ADJ
bracis-19036	65	25	species	specie	NOUN
bracis-19036	65	26	concentration	concentration	NOUN
bracis-19036	65	27	,	,	PUNCT
bracis-19036	65	28	modeling	model	VERB
bracis-19036	65	29	them	they	PRON
bracis-19036	65	30	through	through	ADP
bracis-19036	65	31	the	the	DET
bracis-19036	65	32	time	time	NOUN
bracis-19036	65	33	-	-	PUNCT
bracis-19036	65	34	rate	rate	NOUN
bracis-19036	65	35	-	-	PUNCT
bracis-19036	65	36	of	of	ADP
bracis-19036	65	37	-	-	PUNCT
bracis-19036	65	38	change	change	NOUN
bracis-19036	65	39	of	of	ADP
bracis-19036	65	40	their	their	PRON
bracis-19036	65	41	concentration	concentration	NOUN
bracis-19036	65	42	variables	variable	NOUN
bracis-19036	65	43	.	.	PUNCT
bracis-19036	66	1	regulatory	regulatory	ADJ
bracis-19036	66	2	interactions	interaction	NOUN
bracis-19036	66	3	take	take	VERB
bracis-19036	66	4	the	the	DET
bracis-19036	66	5	form	form	NOUN
bracis-19036	66	6	of	of	ADP
bracis-19036	66	7	functional	functional	ADJ
bracis-19036	66	8	and	and	CCONJ
bracis-19036	66	9	differential	differential	ADJ
bracis-19036	66	10	relationships	relationship	NOUN
bracis-19036	66	11	between	between	ADP
bracis-19036	66	12	concentration	concentration	NOUN
bracis-19036	66	13	variables	variable	NOUN
bracis-19036	66	14	 	 	SPACE
bracis-19036	67	1	[	[	X
bracis-19036	67	2	22	22	NUM
bracis-19036	67	3	]	]	PUNCT
bracis-19036	67	4	.	.	PUNCT
bracis-19036	68	1	more	more	ADV
bracis-19036	68	2	specifically	specifically	ADV
bracis-19036	68	3	,	,	PUNCT
bracis-19036	68	4	gene	gene	NOUN
bracis-19036	68	5	regulation	regulation	NOUN
bracis-19036	68	6	is	be	AUX
bracis-19036	68	7	modeled	model	VERB
bracis-19036	68	8	by	by	ADP
bracis-19036	68	9	rate	rate	NOUN
bracis-19036	68	10	equations	equation	NOUN
bracis-19036	68	11	that	that	PRON
bracis-19036	68	12	express	express	VERB
bracis-19036	68	13	the	the	DET
bracis-19036	68	14	rate	rate	NOUN
bracis-19036	68	15	of	of	ADP
bracis-19036	68	16	production	production	NOUN
bracis-19036	68	17	of	of	ADP
bracis-19036	68	18	a	a	DET
bracis-19036	68	19	system	system	NOUN
bracis-19036	68	20	component	component	NOUN
bracis-19036	68	21	as	as	ADP
bracis-19036	68	22	a	a	DET
bracis-19036	68	23	function	function	NOUN
bracis-19036	68	24	of	of	ADP
bracis-19036	68	25	the	the	DET
bracis-19036	68	26	concentrations	concentration	NOUN
bracis-19036	68	27	of	of	ADP
bracis-19036	68	28	other	other	ADJ
bracis-19036	68	29	components	component	NOUN
bracis-19036	68	30	.	.	PUNCT
bracis-19036	69	1	also	also	ADV
bracis-19036	69	2	,	,	PUNCT
bracis-19036	69	3	it	it	PRON
bracis-19036	69	4	is	be	AUX
bracis-19036	69	5	possible	possible	ADJ
bracis-19036	69	6	to	to	PART
bracis-19036	69	7	model	model	VERB
bracis-19036	69	8	grns	grn	NOUN
bracis-19036	69	9	through	through	ADP
bracis-19036	69	10	a	a	DET
bracis-19036	69	11	discrete	discrete	ADJ
bracis-19036	69	12	model	model	NOUN
bracis-19036	69	13	,	,	PUNCT
bracis-19036	69	14	such	such	ADJ
bracis-19036	69	15	as	as	ADP
bracis-19036	69	16	boolean	boolean	ADJ
bracis-19036	69	17	networks	network	NOUN
bracis-19036	69	18	.	.	PUNCT
bracis-19036	70	1	boolean	boolean	ADJ
bracis-19036	70	2	networks	network	NOUN
bracis-19036	70	3	use	use	VERB
bracis-19036	70	4	boolean	boolean	ADJ
bracis-19036	70	5	algebra	algebra	NOUN
bracis-19036	70	6	to	to	PART
bracis-19036	70	7	discover	discover	VERB
bracis-19036	70	8	the	the	DET
bracis-19036	70	9	relationship	relationship	NOUN
bracis-19036	70	10	between	between	ADP
bracis-19036	70	11	genes	gene	NOUN
bracis-19036	70	12	.	.	PUNCT
bracis-19036	71	1	moreover	moreover	ADV
bracis-19036	71	2	,	,	PUNCT
bracis-19036	71	3	boolean	boolean	ADJ
bracis-19036	71	4	networks	network	NOUN
bracis-19036	71	5	assume	assume	VERB
bracis-19036	71	6	each	each	DET
bracis-19036	71	7	gene	gene	NOUN
bracis-19036	71	8	g	g	NOUN
bracis-19036	71	9	at	at	ADP
bracis-19036	71	10	a	a	DET
bracis-19036	71	11	time	time	NOUN
bracis-19036	71	12	point	point	NOUN
bracis-19036	71	13	t	t	PROPN
bracis-19036	71	14	to	to	PART
bracis-19036	71	15	be	be	AUX
bracis-19036	71	16	in	in	ADP
bracis-19036	71	17	one	one	NUM
bracis-19036	71	18	of	of	ADP
bracis-19036	71	19	two	two	NUM
bracis-19036	71	20	states	state	NOUN
bracis-19036	71	21	,	,	PUNCT
bracis-19036	71	22	active	active	ADJ
bracis-19036	71	23	or	or	CCONJ
bracis-19036	71	24	inactive	inactive	ADJ
bracis-19036	71	25	,	,	PUNCT
bracis-19036	71	26	according	accord	VERB
bracis-19036	71	27	to	to	ADP
bracis-19036	71	28	its	its	PRON
bracis-19036	71	29	gene	gene	NOUN
bracis-19036	71	30	expression	expression	NOUN
bracis-19036	71	31	data	datum	NOUN
bracis-19036	71	32	at	at	ADP
bracis-19036	71	33	time	time	NOUN
bracis-19036	71	34	t	t	PROPN
bracis-19036	71	35	 	 	SPACE
bracis-19036	72	1	[	[	X
bracis-19036	72	2	2	2	NUM
bracis-19036	72	3	]	]	PUNCT
bracis-19036	72	4	,	,	PUNCT
bracis-19036	72	5	therefore	therefore	ADV
bracis-19036	72	6	,	,	PUNCT
bracis-19036	72	7	one	one	PRON
bracis-19036	72	8	needs	need	VERB
bracis-19036	72	9	to	to	PART
bracis-19036	72	10	binarize	binarize	VERB
bracis-19036	72	11	the	the	DET
bracis-19036	72	12	data	datum	NOUN
bracis-19036	72	13	,	,	PUNCT
bracis-19036	72	14	leading	lead	VERB
bracis-19036	72	15	to	to	ADP
bracis-19036	72	16	information	information	NOUN
bracis-19036	72	17	loss	loss	NOUN
bracis-19036	72	18	.	.	PUNCT
bracis-19036	73	1	given	give	VERB
bracis-19036	73	2	a	a	DET
bracis-19036	73	3	threshold	threshold	NOUN
bracis-19036	73	4	,	,	PUNCT
bracis-19036	73	5	the	the	DET
bracis-19036	73	6	data	data	NOUN
bracis-19036	73	7	is	be	AUX
bracis-19036	73	8	discretized	discretize	VERB
bracis-19036	73	9	in	in	ADP
bracis-19036	73	10	1	1	NUM
bracis-19036	73	11	(	(	PUNCT
bracis-19036	73	12	activation	activation	NOUN
bracis-19036	73	13	)	)	PUNCT
bracis-19036	73	14	or	or	CCONJ
bracis-19036	73	15	0	0	NUM
bracis-19036	73	16	(	(	PUNCT
bracis-19036	73	17	inhibition	inhibition	NOUN
bracis-19036	73	18	)	)	PUNCT
bracis-19036	73	19	.	.	PUNCT
bracis-19036	74	1	boolean	boolean	ADJ
bracis-19036	74	2	-	-	PUNCT
bracis-19036	74	3	based	base	VERB
bracis-19036	74	4	models	model	NOUN
bracis-19036	74	5	simplify	simplify	VERB
bracis-19036	74	6	the	the	DET
bracis-19036	74	7	structure	structure	NOUN
bracis-19036	74	8	and	and	CCONJ
bracis-19036	74	9	dynamics	dynamic	NOUN
bracis-19036	74	10	of	of	ADP
bracis-19036	74	11	gene	gene	NOUN
bracis-19036	74	12	regulation	regulation	NOUN
bracis-19036	74	13	.	.	PUNCT
bracis-19036	75	1	inferred	infer	VERB
bracis-19036	75	2	networks	network	NOUN
bracis-19036	75	3	provide	provide	VERB
bracis-19036	75	4	a	a	DET
bracis-19036	75	5	quantitative	quantitative	ADJ
bracis-19036	75	6	measure	measure	NOUN
bracis-19036	75	7	of	of	ADP
bracis-19036	75	8	gene	gene	NOUN
bracis-19036	75	9	regulatory	regulatory	ADJ
bracis-19036	75	10	mechanisms	mechanism	NOUN
bracis-19036	75	11	 	 	SPACE
bracis-19036	76	1	[	[	X
bracis-19036	76	2	22	22	NUM
bracis-19036	76	3	]	]	PUNCT
bracis-19036	76	4	.	.	PUNCT
bracis-19036	77	1	this	this	DET
bracis-19036	77	2	model	model	NOUN
bracis-19036	77	3	,	,	PUNCT
bracis-19036	77	4	despite	despite	SCONJ
bracis-19036	77	5	its	its	PRON
bracis-19036	77	6	simplicity	simplicity	NOUN
bracis-19036	77	7	,	,	PUNCT
bracis-19036	77	8	can	can	AUX
bracis-19036	77	9	represent	represent	VERB
bracis-19036	77	10	,	,	PUNCT
bracis-19036	77	11	through	through	ADP
bracis-19036	77	12	its	its	PRON
bracis-19036	77	13	dynamics	dynamic	NOUN
bracis-19036	77	14	,	,	PUNCT
bracis-19036	77	15	several	several	ADJ
bracis-19036	77	16	biologically	biologically	ADV
bracis-19036	77	17	significant	significant	ADJ
bracis-19036	77	18	phenomena	phenomenon	NOUN
bracis-19036	77	19	.	.	PUNCT
bracis-19036	78	1	furthermore	furthermore	ADV
bracis-19036	78	2	,	,	PUNCT
bracis-19036	78	3	it	it	PRON
bracis-19036	78	4	is	be	AUX
bracis-19036	78	5	possible	possible	ADJ
bracis-19036	78	6	to	to	PART
bracis-19036	78	7	obtain	obtain	VERB
bracis-19036	78	8	several	several	ADJ
bracis-19036	78	9	practical	practical	ADJ
bracis-19036	78	10	uses	use	NOUN
bracis-19036	78	11	,	,	PUNCT
bracis-19036	78	12	such	such	ADJ
bracis-19036	78	13	as	as	ADP
bracis-19036	78	14	the	the	DET
bracis-19036	78	15	identification	identification	NOUN
bracis-19036	78	16	of	of	ADP
bracis-19036	78	17	drugs	drug	NOUN
bracis-19036	78	18	for	for	ADP
bracis-19036	78	19	cancer	cancer	NOUN
bracis-19036	78	20	treatment	treatment	NOUN
bracis-19036	78	21	through	through	ADP
bracis-19036	78	22	the	the	DET
bracis-19036	78	23	inference	inference	NOUN
bracis-19036	78	24	of	of	ADP
bracis-19036	78	25	the	the	DET
bracis-19036	78	26	relationships	relationship	NOUN
bracis-19036	78	27	between	between	ADP
bracis-19036	78	28	genes	gene	NOUN
bracis-19036	78	29	from	from	ADP
bracis-19036	78	30	experimental	experimental	ADJ
bracis-19036	78	31	data	datum	NOUN
bracis-19036	78	32	such	such	ADJ
bracis-19036	78	33	as	as	ADP
bracis-19036	78	34	gene	gene	NOUN
bracis-19036	78	35	expression	expression	NOUN
bracis-19036	78	36	profiles	profile	NOUN
bracis-19036	78	37	 	 	SPACE
bracis-19036	79	1	[	[	X
bracis-19036	79	2	16	16	NUM
bracis-19036	79	3	]	]	PUNCT
bracis-19036	79	4	.	.	PUNCT
bracis-19036	80	1	there	there	PRON
bracis-19036	80	2	are	be	VERB
bracis-19036	80	3	several	several	ADJ
bracis-19036	80	4	techniques	technique	NOUN
bracis-19036	80	5	for	for	ADP
bracis-19036	80	6	measuring	measure	VERB
bracis-19036	80	7	the	the	DET
bracis-19036	80	8	expression	expression	NOUN
bracis-19036	80	9	of	of	ADP
bracis-19036	80	10	a	a	DET
bracis-19036	80	11	gene	gene	NOUN
bracis-19036	80	12	.	.	PUNCT
bracis-19036	81	1	for	for	ADP
bracis-19036	81	2	instance	instance	NOUN
bracis-19036	81	3	,	,	PUNCT
bracis-19036	81	4	single	single	ADJ
bracis-19036	81	5	-	-	PUNCT
bracis-19036	81	6	cell	cell	NOUN
bracis-19036	81	7	rna	rna	NOUN
bracis-19036	81	8	-	-	PUNCT
bracis-19036	81	9	sequencing	sequence	VERB
bracis-19036	81	10	(	(	PUNCT
bracis-19036	81	11	scrna	scrna	NOUN
bracis-19036	81	12	-	-	PUNCT
bracis-19036	81	13	seq	seq	NOUN
bracis-19036	81	14	)	)	PUNCT
bracis-19036	81	15	is	be	AUX
bracis-19036	81	16	attractive	attractive	ADJ
bracis-19036	81	17	for	for	ADP
bracis-19036	81	18	grn	grn	PROPN
bracis-19036	81	19	inference	inference	NOUN
bracis-19036	81	20	due	due	ADP
bracis-19036	81	21	to	to	ADP
bracis-19036	81	22	its	its	PRON
bracis-19036	81	23	production	production	NOUN
bracis-19036	81	24	of	of	ADP
bracis-19036	81	25	thousands	thousand	NOUN
bracis-19036	81	26	of	of	ADP
bracis-19036	81	27	independent	independent	ADJ
bracis-19036	81	28	measurements	measurement	NOUN
bracis-19036	81	29	 	 	SPACE
bracis-19036	82	1	[	[	X
bracis-19036	82	2	14	14	NUM
bracis-19036	82	3	]	]	PUNCT
bracis-19036	82	4	and	and	CCONJ
bracis-19036	82	5	there	there	PRON
bracis-19036	82	6	are	be	VERB
bracis-19036	82	7	methods	method	NOUN
bracis-19036	82	8	that	that	PRON
bracis-19036	82	9	sort	sort	VERB
bracis-19036	82	10	cells	cell	NOUN
bracis-19036	82	11	along	along	ADP
bracis-19036	82	12	“	"	PUNCT
bracis-19036	82	13	trajectories	trajectory	NOUN
bracis-19036	82	14	”	"	PUNCT
bracis-19036	82	15	describing	describe	VERB
bracis-19036	82	16	the	the	DET
bracis-19036	82	17	development	development	NOUN
bracis-19036	82	18	or	or	CCONJ
bracis-19036	82	19	progress	progress	NOUN
bracis-19036	82	20	of	of	ADP
bracis-19036	82	21	the	the	DET
bracis-19036	82	22	cell	cell	NOUN
bracis-19036	83	1	[	[	X
bracis-19036	83	2	10	10	NUM
bracis-19036	83	3	,	,	PUNCT
bracis-19036	83	4	21	21	NUM
bracis-19036	83	5	,	,	PUNCT
bracis-19036	83	6	23	23	NUM
bracis-19036	83	7	,	,	PUNCT
bracis-19036	83	8	27	27	NUM
bracis-19036	83	9	]	]	PUNCT
bracis-19036	83	10	,	,	PUNCT
bracis-19036	83	11	called	call	VERB
bracis-19036	83	12	pseudotime	pseudotime	NOUN
bracis-19036	83	13	,	,	PUNCT
bracis-19036	83	14	which	which	PRON
bracis-19036	83	15	is	be	AUX
bracis-19036	83	16	a	a	DET
bracis-19036	83	17	measure	measure	NOUN
bracis-19036	83	18	of	of	ADP
bracis-19036	83	19	how	how	SCONJ
bracis-19036	83	20	far	far	ADV
bracis-19036	83	21	a	a	DET
bracis-19036	83	22	cell	cell	NOUN
bracis-19036	83	23	has	have	AUX
bracis-19036	83	24	moved	move	VERB
bracis-19036	83	25	through	through	ADP
bracis-19036	83	26	biological	biological	ADJ
bracis-19036	83	27	progress	progress	NOUN
bracis-19036	83	28	.	.	PUNCT
bracis-19036	84	1	also	also	ADV
bracis-19036	84	2	,	,	PUNCT
bracis-19036	84	3	when	when	SCONJ
bracis-19036	84	4	using	use	VERB
bracis-19036	84	5	scrna	scrna	NOUN
bracis-19036	84	6	-	-	PUNCT
bracis-19036	84	7	seq	seq	NOUN
bracis-19036	84	8	data	datum	NOUN
bracis-19036	84	9	technologies	technology	NOUN
bracis-19036	84	10	,	,	PUNCT
bracis-19036	84	11	it	it	PRON
bracis-19036	84	12	is	be	AUX
bracis-19036	84	13	common	common	ADJ
bracis-19036	84	14	to	to	PART
bracis-19036	84	15	observe	observe	VERB
bracis-19036	84	16	a	a	DET
bracis-19036	84	17	dropout	dropout	NOUN
bracis-19036	84	18	,	,	PUNCT
bracis-19036	84	19	which	which	PRON
bracis-19036	84	20	occurs	occur	VERB
bracis-19036	84	21	when	when	SCONJ
bracis-19036	84	22	a	a	DET
bracis-19036	84	23	gene	gene	NOUN
bracis-19036	84	24	is	be	AUX
bracis-19036	84	25	observed	observe	VERB
bracis-19036	84	26	at	at	ADP
bracis-19036	84	27	a	a	DET
bracis-19036	84	28	low	low	ADJ
bracis-19036	84	29	or	or	CCONJ
bracis-19036	84	30	moderate	moderate	ADJ
bracis-19036	84	31	expression	expression	NOUN
bracis-19036	84	32	level	level	NOUN
bracis-19036	84	33	in	in	ADP
bracis-19036	84	34	one	one	NUM
bracis-19036	84	35	cell	cell	NOUN
bracis-19036	84	36	but	but	CCONJ
bracis-19036	84	37	it	it	PRON
bracis-19036	84	38	is	be	AUX
bracis-19036	84	39	not	not	PART
bracis-19036	84	40	detected	detect	VERB
bracis-19036	84	41	in	in	ADP
bracis-19036	84	42	another	another	DET
bracis-19036	84	43	cell	cell	NOUN
bracis-19036	84	44	of	of	ADP
bracis-19036	84	45	the	the	DET
bracis-19036	84	46	same	same	ADJ
bracis-19036	84	47	type	type	NOUN
bracis-19036	84	48	.	.	PUNCT
bracis-19036	85	1	dropouts	dropout	NOUN
bracis-19036	85	2	make	make	VERB
bracis-19036	85	3	it	it	PRON
bracis-19036	85	4	difficult	difficult	ADJ
bracis-19036	85	5	to	to	PART
bracis-19036	85	6	get	get	VERB
bracis-19036	85	7	correct	correct	ADJ
bracis-19036	85	8	grns	grn	NOUN
bracis-19036	85	9	.	.	PUNCT
bracis-19036	86	1	3	3	NUM
bracis-19036	86	2	cartesian	cartesian	ADJ
bracis-19036	86	3	genetic	genetic	ADJ
bracis-19036	86	4	programming	programming	NOUN
bracis-19036	86	5	cartesian	cartesian	ADJ
bracis-19036	86	6	genetic	genetic	ADJ
bracis-19036	86	7	programming	programming	NOUN
bracis-19036	86	8	is	be	AUX
bracis-19036	86	9	a	a	DET
bracis-19036	86	10	genetic	genetic	ADJ
bracis-19036	86	11	programming	programming	NOUN
bracis-19036	86	12	technique	technique	NOUN
bracis-19036	86	13	in	in	ADP
bracis-19036	86	14	which	which	PRON
bracis-19036	86	15	programs	program	NOUN
bracis-19036	86	16	are	be	AUX
bracis-19036	86	17	directed	direct	VERB
bracis-19036	86	18	acyclic	acyclic	ADJ
bracis-19036	86	19	graphs	graph	NOUN
bracis-19036	86	20	(	(	PUNCT
bracis-19036	86	21	dags	dag	NOUN
bracis-19036	86	22	)	)	PUNCT
bracis-19036	86	23	encoded	encode	VERB
bracis-19036	86	24	by	by	ADP
bracis-19036	86	25	a	a	DET
bracis-19036	86	26	matrix	matrix	NOUN
bracis-19036	86	27	of	of	ADP
bracis-19036	86	28	processing	processing	NOUN
bracis-19036	86	29	nodes	node	NOUN
bracis-19036	86	30	,	,	PUNCT
bracis-19036	86	31	with	with	ADP
bracis-19036	86	32	\(n_{c}\	\(n_{c}\	NOUN
bracis-19036	86	33	)	)	PUNCT
bracis-19036	86	34	columns	column	NOUN
bracis-19036	86	35	and	and	CCONJ
bracis-19036	86	36	\(n_{r}\	\(n_{r}\	PROPN
bracis-19036	86	37	)	)	PUNCT
bracis-19036	86	38	rows	row	NOUN
bracis-19036	86	39	.	.	PUNCT
bracis-19036	86	40	 	 	SPACE
bracis-19036	87	1	[	[	X
bracis-19036	87	2	17	17	NUM
bracis-19036	87	3	]	]	PUNCT
bracis-19036	87	4	.	.	PUNCT
bracis-19036	88	1	the	the	DET
bracis-19036	88	2	genes	gene	NOUN
bracis-19036	88	3	are	be	AUX
bracis-19036	88	4	integer	integer	NOUN
bracis-19036	88	5	values	value	NOUN
bracis-19036	88	6	and	and	CCONJ
bracis-19036	88	7	,	,	PUNCT
bracis-19036	88	8	for	for	ADP
bracis-19036	88	9	each	each	DET
bracis-19036	88	10	gene	gene	NOUN
bracis-19036	88	11	,	,	PUNCT
bracis-19036	88	12	there	there	PRON
bracis-19036	88	13	are	be	VERB
bracis-19036	88	14	inputs	input	NOUN
bracis-19036	88	15	and	and	CCONJ
bracis-19036	88	16	operation	operation	NOUN
bracis-19036	88	17	/	/	SYM
bracis-19036	88	18	function	function	NOUN
bracis-19036	88	19	that	that	SCONJ
bracis-19036	88	20	the	the	DET
bracis-19036	88	21	node	node	NOUN
bracis-19036	88	22	performs	perform	VERB
bracis-19036	88	23	.	.	PUNCT
bracis-19036	89	1	given	give	VERB
bracis-19036	89	2	a	a	DET
bracis-19036	89	3	node	node	NOUN
bracis-19036	89	4	in	in	ADP
bracis-19036	89	5	the	the	DET
bracis-19036	89	6	matrix	matrix	NOUN
bracis-19036	89	7	,	,	PUNCT
bracis-19036	89	8	the	the	DET
bracis-19036	89	9	nodes	node	NOUN
bracis-19036	89	10	at	at	ADP
bracis-19036	89	11	its	its	PRON
bracis-19036	89	12	left	left	ADJ
bracis-19036	89	13	side	side	NOUN
bracis-19036	89	14	can	can	AUX
bracis-19036	89	15	be	be	AUX
bracis-19036	89	16	used	use	VERB
bracis-19036	89	17	as	as	ADP
bracis-19036	89	18	inputs	input	NOUN
bracis-19036	89	19	.	.	PUNCT
bracis-19036	90	1	there	there	PRON
bracis-19036	90	2	is	be	VERB
bracis-19036	90	3	a	a	DET
bracis-19036	90	4	user	user	NOUN
bracis-19036	90	5	-	-	PUNCT
bracis-19036	90	6	defined	define	VERB
bracis-19036	90	7	parameter	parameter	NOUN
bracis-19036	90	8	(	(	PUNCT
bracis-19036	90	9	levels	level	NOUN
bracis-19036	90	10	-	-	PUNCT
bracis-19036	90	11	back	back	NOUN
bracis-19036	90	12	)	)	PUNCT
bracis-19036	90	13	that	that	PRON
bracis-19036	90	14	limits	limit	VERB
bracis-19036	90	15	the	the	DET
bracis-19036	90	16	number	number	NOUN
bracis-19036	90	17	of	of	ADP
bracis-19036	90	18	columns	column	NOUN
bracis-19036	90	19	at	at	ADP
bracis-19036	90	20	the	the	DET
bracis-19036	90	21	left	left	ADJ
bracis-19036	90	22	side	side	NOUN
bracis-19036	90	23	where	where	SCONJ
bracis-19036	90	24	inputs	input	NOUN
bracis-19036	90	25	can	can	AUX
bracis-19036	90	26	be	be	AUX
bracis-19036	90	27	selected	select	VERB
bracis-19036	90	28	to	to	PART
bracis-19036	90	29	constrain	constrain	VERB
bracis-19036	90	30	the	the	DET
bracis-19036	90	31	connectivity	connectivity	NOUN
bracis-19036	90	32	of	of	ADP
bracis-19036	90	33	the	the	DET
bracis-19036	90	34	graph	graph	NOUN
bracis-19036	90	35	.	.	PUNCT
bracis-19036	91	1	the	the	DET
bracis-19036	91	2	number	number	NOUN
bracis-19036	91	3	of	of	ADP
bracis-19036	91	4	inputs	input	NOUN
bracis-19036	91	5	that	that	PRON
bracis-19036	91	6	a	a	DET
bracis-19036	91	7	node	node	NOUN
bracis-19036	91	8	can	can	AUX
bracis-19036	91	9	receive	receive	VERB
bracis-19036	91	10	is	be	AUX
bracis-19036	91	11	called	call	VERB
bracis-19036	91	12	arity	arity	NOUN
bracis-19036	91	13	.	.	PUNCT
bracis-19036	92	1	also	also	ADV
bracis-19036	92	2	,	,	PUNCT
bracis-19036	92	3	the	the	DET
bracis-19036	92	4	genotype	genotype	NOUN
bracis-19036	92	5	contains	contain	VERB
bracis-19036	92	6	nodes	node	NOUN
bracis-19036	92	7	that	that	PRON
bracis-19036	92	8	contribute	contribute	VERB
bracis-19036	92	9	directly	directly	ADV
bracis-19036	92	10	to	to	ADP
bracis-19036	92	11	the	the	DET
bracis-19036	92	12	output	output	NOUN
bracis-19036	92	13	,	,	PUNCT
bracis-19036	92	14	called	call	VERB
bracis-19036	92	15	active	active	ADJ
bracis-19036	92	16	nodes	node	NOUN
bracis-19036	92	17	,	,	PUNCT
bracis-19036	92	18	and	and	CCONJ
bracis-19036	92	19	those	those	PRON
bracis-19036	92	20	that	that	PRON
bracis-19036	92	21	do	do	VERB
bracis-19036	92	22	not	not	PART
bracis-19036	92	23	,	,	PUNCT
bracis-19036	92	24	the	the	DET
bracis-19036	92	25	inactive	inactive	ADJ
bracis-19036	92	26	nodes	node	NOUN
bracis-19036	92	27	.	.	PUNCT
bracis-19036	93	1	the	the	DET
bracis-19036	93	2	phenotype	phenotype	NOUN
bracis-19036	93	3	is	be	AUX
bracis-19036	93	4	composed	compose	VERB
bracis-19036	93	5	only	only	ADV
bracis-19036	93	6	of	of	ADP
bracis-19036	93	7	the	the	DET
bracis-19036	93	8	active	active	ADJ
bracis-19036	93	9	nodes	node	NOUN
bracis-19036	93	10	and	and	CCONJ
bracis-19036	93	11	the	the	DET
bracis-19036	93	12	genotype	genotype	NOUN
bracis-19036	93	13	-	-	PUNCT
bracis-19036	93	14	phenotype	phenotype	NOUN
bracis-19036	93	15	mapping	mapping	NOUN
bracis-19036	93	16	is	be	AUX
bracis-19036	93	17	done	do	VERB
bracis-19036	93	18	by	by	ADP
bracis-19036	93	19	recursively	recursively	ADV
bracis-19036	93	20	determining	determine	VERB
bracis-19036	93	21	the	the	DET
bracis-19036	93	22	nodes	node	NOUN
bracis-19036	93	23	that	that	PRON
bracis-19036	93	24	contribute	contribute	VERB
bracis-19036	93	25	to	to	ADP
bracis-19036	93	26	each	each	DET
bracis-19036	93	27	output	output	NOUN
bracis-19036	93	28	,	,	PUNCT
bracis-19036	93	29	starting	start	VERB
bracis-19036	93	30	on	on	ADP
bracis-19036	93	31	the	the	DET
bracis-19036	93	32	output	output	NOUN
bracis-19036	93	33	and	and	CCONJ
bracis-19036	93	34	ending	end	VERB
bracis-19036	93	35	on	on	ADP
bracis-19036	93	36	the	the	DET
bracis-19036	93	37	primary	primary	ADJ
bracis-19036	93	38	inputs	input	NOUN
bracis-19036	93	39	.	.	PUNCT
bracis-19036	94	1	the	the	DET
bracis-19036	94	2	function	function	NOUN
bracis-19036	94	3	set	set	NOUN
bracis-19036	94	4	is	be	AUX
bracis-19036	94	5	user	user	NOUN
bracis-19036	94	6	-	-	PUNCT
bracis-19036	94	7	defined	define	VERB
bracis-19036	94	8	and	and	CCONJ
bracis-19036	94	9	problem	problem	NOUN
bracis-19036	94	10	-	-	PUNCT
bracis-19036	94	11	dependent	dependent	ADJ
bracis-19036	94	12	.	.	PUNCT
bracis-19036	95	1	for	for	ADP
bracis-19036	95	2	example	example	NOUN
bracis-19036	95	3	,	,	PUNCT
bracis-19036	95	4	logic	logic	NOUN
bracis-19036	95	5	functions	function	NOUN
bracis-19036	95	6	or	or	CCONJ
bracis-19036	95	7	gates	gate	NOUN
bracis-19036	95	8	are	be	AUX
bracis-19036	95	9	used	use	VERB
bracis-19036	95	10	when	when	SCONJ
bracis-19036	95	11	designing	design	VERB
bracis-19036	95	12	digital	digital	ADJ
bracis-19036	95	13	circuits	circuit	NOUN
bracis-19036	95	14	.	.	PUNCT
bracis-19036	96	1	figure	figure	NOUN
bracis-19036	96	2	 	 	SPACE
bracis-19036	96	3	1b	1b	PROPN
bracis-19036	96	4	presents	present	VERB
bracis-19036	96	5	a	a	DET
bracis-19036	96	6	cgp	cgp	PROPN
bracis-19036	96	7	individual	individual	NOUN
bracis-19036	96	8	with	with	ADP
bracis-19036	96	9	three	three	NUM
bracis-19036	96	10	primary	primary	ADJ
bracis-19036	96	11	inputs	input	NOUN
bracis-19036	96	12	and	and	CCONJ
bracis-19036	96	13	one	one	NUM
bracis-19036	96	14	output	output	NOUN
bracis-19036	96	15	.	.	PUNCT
bracis-19036	97	1	the	the	DET
bracis-19036	97	2	functions	function	NOUN
bracis-19036	97	3	are	be	AUX
bracis-19036	97	4	logical	logical	ADJ
bracis-19036	97	5	ones	one	NOUN
bracis-19036	97	6	.	.	PUNCT
bracis-19036	98	1	grey	grey	ADJ
bracis-19036	98	2	nodes	node	NOUN
bracis-19036	98	3	are	be	AUX
bracis-19036	98	4	active	active	ADJ
bracis-19036	98	5	and	and	CCONJ
bracis-19036	98	6	white	white	ADJ
bracis-19036	98	7	nodes	node	NOUN
bracis-19036	98	8	,	,	PUNCT
bracis-19036	98	9	inactive	inactive	ADJ
bracis-19036	98	10	.	.	PUNCT
bracis-19036	99	1	the	the	DET
bracis-19036	99	2	most	most	ADV
bracis-19036	99	3	common	common	ADJ
bracis-19036	99	4	search	search	NOUN
bracis-19036	99	5	technique	technique	NOUN
bracis-19036	99	6	used	use	VERB
bracis-19036	99	7	in	in	ADP
bracis-19036	99	8	cgp	cgp	PROPN
bracis-19036	99	9	is	be	AUX
bracis-19036	99	10	the	the	DET
bracis-19036	99	11	\((1	\((1	NOUN
bracis-19036	99	12	+	+	CCONJ
bracis-19036	99	13	\lambda	\lambda	PROPN
bracis-19036	99	14	)	)	PUNCT
bracis-19036	99	15	\	\	NOUN
bracis-19036	99	16	)	)	PUNCT
bracis-19036	99	17	evolutionary	evolutionary	ADJ
bracis-19036	99	18	strategy	strategy	NOUN
bracis-19036	99	19	(	(	PUNCT
bracis-19036	99	20	es	es	NOUN
bracis-19036	99	21	)	)	PUNCT
bracis-19036	99	22	 	 	SPACE
bracis-19036	100	1	[	[	X
bracis-19036	100	2	17	17	NUM
bracis-19036	100	3	]	]	PUNCT
bracis-19036	100	4	,	,	PUNCT
bracis-19036	100	5	where	where	SCONJ
bracis-19036	100	6	\(\lambda	\(\lambda	NOUN
bracis-19036	100	7	\	\	NOUN
bracis-19036	100	8	)	)	PUNCT
bracis-19036	100	9	is	be	AUX
bracis-19036	100	10	the	the	DET
bracis-19036	100	11	number	number	NOUN
bracis-19036	100	12	of	of	ADP
bracis-19036	100	13	new	new	ADJ
bracis-19036	100	14	solutions	solution	NOUN
bracis-19036	100	15	generated	generate	VERB
bracis-19036	100	16	at	at	ADP
bracis-19036	100	17	each	each	DET
bracis-19036	100	18	iteration	iteration	NOUN
bracis-19036	100	19	.	.	PUNCT
bracis-19036	101	1	in	in	ADP
bracis-19036	101	2	this	this	DET
bracis-19036	101	3	case	case	NOUN
bracis-19036	101	4	,	,	PUNCT
bracis-19036	101	5	the	the	DET
bracis-19036	101	6	best	good	ADJ
bracis-19036	101	7	individual	individual	NOUN
bracis-19036	101	8	,	,	PUNCT
bracis-19036	101	9	the	the	DET
bracis-19036	101	10	one	one	NOUN
bracis-19036	101	11	with	with	ADP
bracis-19036	101	12	more	more	ADJ
bracis-19036	101	13	matches	match	NOUN
bracis-19036	101	14	concerning	concern	VERB
bracis-19036	101	15	its	its	PRON
bracis-19036	101	16	truth	truth	NOUN
bracis-19036	101	17	-	-	PUNCT
bracis-19036	101	18	table	table	NOUN
bracis-19036	101	19	,	,	PUNCT
bracis-19036	101	20	between	between	ADP
bracis-19036	101	21	the	the	DET
bracis-19036	101	22	parent	parent	NOUN
bracis-19036	101	23	and	and	CCONJ
bracis-19036	101	24	the	the	DET
bracis-19036	101	25	\(\lambda	\(\lambda	PRON
bracis-19036	101	26	\	\	NOUN
bracis-19036	101	27	)	)	PUNCT
bracis-19036	101	28	new	new	ADJ
bracis-19036	101	29	generated	generate	VERB
bracis-19036	101	30	solutions	solution	NOUN
bracis-19036	101	31	is	be	AUX
bracis-19036	101	32	selected	select	VERB
bracis-19036	101	33	for	for	ADP
bracis-19036	101	34	the	the	DET
bracis-19036	101	35	next	next	ADJ
bracis-19036	101	36	generation	generation	NOUN
bracis-19036	101	37	.	.	PUNCT
bracis-19036	102	1	3.1	3.1	NUM
bracis-19036	102	2	mutation	mutation	NOUN
bracis-19036	102	3	operators	operator	NOUN
bracis-19036	102	4	cgp	cgp	PROPN
bracis-19036	102	5	normally	normally	ADV
bracis-19036	102	6	uses	use	VERB
bracis-19036	102	7	only	only	ADJ
bracis-19036	102	8	mutation	mutation	NOUN
bracis-19036	102	9	to	to	PART
bracis-19036	102	10	generate	generate	VERB
bracis-19036	102	11	new	new	ADJ
bracis-19036	102	12	individuals	individual	NOUN
bracis-19036	102	13	and	and	CCONJ
bracis-19036	102	14	crossover	crossover	ADP
bracis-19036	102	15	operators	operator	NOUN
bracis-19036	102	16	have	have	AUX
bracis-19036	102	17	received	receive	VERB
bracis-19036	102	18	little	little	ADJ
bracis-19036	102	19	attention	attention	NOUN
bracis-19036	102	20	in	in	ADP
bracis-19036	102	21	the	the	DET
bracis-19036	102	22	cgp	cgp	PROPN
bracis-19036	102	23	 	 	SPACE
bracis-19036	103	1	[	[	X
bracis-19036	103	2	17	17	NUM
bracis-19036	103	3	]	]	PUNCT
bracis-19036	103	4	.	.	PUNCT
bracis-19036	104	1	the	the	DET
bracis-19036	104	2	two	two	NUM
bracis-19036	104	3	most	most	ADV
bracis-19036	104	4	adopted	adopt	VERB
bracis-19036	104	5	mutation	mutation	NOUN
bracis-19036	104	6	approaches	approach	NOUN
bracis-19036	104	7	are	be	AUX
bracis-19036	104	8	point	point	NOUN
bracis-19036	104	9	mutation	mutation	NOUN
bracis-19036	104	10	 	 	SPACE
bracis-19036	105	1	[	[	X
bracis-19036	105	2	17	17	NUM
bracis-19036	105	3	]	]	PUNCT
bracis-19036	105	4	and	and	CCONJ
bracis-19036	105	5	sam	sam	PROPN
bracis-19036	105	6	 	 	SPACE
bracis-19036	106	1	[	[	X
bracis-19036	106	2	9	9	NUM
bracis-19036	106	3	]	]	PUNCT
bracis-19036	106	4	.	.	PUNCT
bracis-19036	107	1	point	point	NOUN
bracis-19036	107	2	mutation	mutation	NOUN
bracis-19036	107	3	is	be	AUX
bracis-19036	107	4	a	a	DET
bracis-19036	107	5	simple	simple	ADJ
bracis-19036	107	6	approach	approach	NOUN
bracis-19036	107	7	that	that	PRON
bracis-19036	107	8	randomly	randomly	ADV
bracis-19036	107	9	selects	select	VERB
bracis-19036	107	10	a	a	DET
bracis-19036	107	11	node	node	NOUN
bracis-19036	107	12	and	and	CCONJ
bracis-19036	107	13	a	a	DET
bracis-19036	107	14	gene	gene	NOUN
bracis-19036	107	15	and	and	CCONJ
bracis-19036	107	16	changes	change	VERB
bracis-19036	107	17	it	it	PRON
bracis-19036	107	18	to	to	ADP
bracis-19036	107	19	another	another	DET
bracis-19036	107	20	valid	valid	ADJ
bracis-19036	107	21	value	value	NOUN
bracis-19036	107	22	.	.	PUNCT
bracis-19036	108	1	however	however	ADV
bracis-19036	108	2	,	,	PUNCT
bracis-19036	108	3	the	the	DET
bracis-19036	108	4	changes	change	NOUN
bracis-19036	108	5	may	may	AUX
bracis-19036	108	6	occur	occur	VERB
bracis-19036	108	7	in	in	ADP
bracis-19036	108	8	inactive	inactive	ADJ
bracis-19036	108	9	nodes	node	NOUN
bracis-19036	108	10	leading	lead	VERB
bracis-19036	108	11	to	to	ADP
bracis-19036	108	12	a	a	DET
bracis-19036	108	13	lack	lack	NOUN
bracis-19036	108	14	of	of	ADP
bracis-19036	108	15	modifications	modification	NOUN
bracis-19036	108	16	in	in	ADP
bracis-19036	108	17	the	the	DET
bracis-19036	108	18	phenotype	phenotype	NOUN
bracis-19036	108	19	.	.	PUNCT
bracis-19036	109	1	sam	sam	PROPN
bracis-19036	109	2	,	,	PUNCT
bracis-19036	109	3	proposed	propose	VERB
bracis-19036	109	4	for	for	ADP
bracis-19036	109	5	reducing	reduce	VERB
bracis-19036	109	6	the	the	DET
bracis-19036	109	7	number	number	NOUN
bracis-19036	109	8	of	of	ADP
bracis-19036	109	9	wasted	waste	VERB
bracis-19036	109	10	objective	objective	ADJ
bracis-19036	109	11	function	function	NOUN
bracis-19036	109	12	evaluations	evaluation	NOUN
bracis-19036	109	13	,	,	PUNCT
bracis-19036	109	14	operates	operate	VERB
bracis-19036	109	15	by	by	ADP
bracis-19036	109	16	(	(	PUNCT
bracis-19036	109	17	i	i	NOUN
bracis-19036	109	18	)	)	PUNCT
bracis-19036	109	19	randomly	randomly	ADV
bracis-19036	109	20	selecting	select	VERB
bracis-19036	109	21	one	one	NUM
bracis-19036	109	22	node	node	NOUN
bracis-19036	109	23	and	and	CCONJ
bracis-19036	109	24	one	one	NUM
bracis-19036	109	25	of	of	ADP
bracis-19036	109	26	its	its	PRON
bracis-19036	109	27	elements	element	NOUN
bracis-19036	109	28	(	(	PUNCT
bracis-19036	109	29	inputs	input	NOUN
bracis-19036	109	30	or	or	CCONJ
bracis-19036	109	31	function	function	NOUN
bracis-19036	109	32	)	)	PUNCT
bracis-19036	109	33	and	and	CCONJ
bracis-19036	109	34	(	(	PUNCT
bracis-19036	109	35	ii	ii	NOUN
bracis-19036	109	36	)	)	PUNCT
bracis-19036	109	37	changing	change	VERB
bracis-19036	109	38	its	its	PRON
bracis-19036	109	39	value	value	NOUN
bracis-19036	109	40	to	to	ADP
bracis-19036	109	41	another	another	DET
bracis-19036	109	42	valid	valid	ADJ
bracis-19036	109	43	value	value	NOUN
bracis-19036	109	44	.	.	PUNCT
bracis-19036	110	1	steps	step	NOUN
bracis-19036	110	2	(	(	PUNCT
bracis-19036	110	3	i	i	NOUN
bracis-19036	110	4	)	)	PUNCT
bracis-19036	110	5	and	and	CCONJ
bracis-19036	110	6	(	(	PUNCT
bracis-19036	110	7	ii	ii	NOUN
bracis-19036	110	8	)	)	PUNCT
bracis-19036	110	9	are	be	AUX
bracis-19036	110	10	repeated	repeat	VERB
bracis-19036	110	11	until	until	SCONJ
bracis-19036	110	12	an	an	DET
bracis-19036	110	13	active	active	ADJ
bracis-19036	110	14	node	node	NOUN
bracis-19036	110	15	is	be	AUX
bracis-19036	110	16	modified	modify	VERB
bracis-19036	110	17	.	.	PUNCT
bracis-19036	111	1	as	as	ADP
bracis-19036	111	2	a	a	DET
bracis-19036	111	3	result	result	NOUN
bracis-19036	111	4	,	,	PUNCT
bracis-19036	111	5	sam	sam	PROPN
bracis-19036	111	6	ensures	ensure	VERB
bracis-19036	111	7	that	that	SCONJ
bracis-19036	111	8	one	one	NUM
bracis-19036	111	9	active	active	ADJ
bracis-19036	111	10	node	node	NOUN
bracis-19036	111	11	is	be	AUX
bracis-19036	111	12	changed	change	VERB
bracis-19036	111	13	.	.	PUNCT
bracis-19036	112	1	somo	somo	NOUN
bracis-19036	112	2	 	 	SPACE
bracis-19036	113	1	[	[	X
bracis-19036	113	2	11	11	NUM
bracis-19036	113	3	]	]	PUNCT
bracis-19036	113	4	was	be	AUX
bracis-19036	113	5	developed	develop	VERB
bracis-19036	113	6	for	for	ADP
bracis-19036	113	7	the	the	DET
bracis-19036	113	8	design	design	NOUN
bracis-19036	113	9	of	of	ADP
bracis-19036	113	10	digital	digital	ADJ
bracis-19036	113	11	circuits	circuit	NOUN
bracis-19036	113	12	using	use	VERB
bracis-19036	113	13	cgp	cgp	PROPN
bracis-19036	113	14	,	,	PUNCT
bracis-19036	113	15	where	where	SCONJ
bracis-19036	113	16	the	the	DET
bracis-19036	113	17	purely	purely	ADV
bracis-19036	113	18	stochastic	stochastic	ADJ
bracis-19036	113	19	mutation	mutation	NOUN
bracis-19036	113	20	operator	operator	NOUN
bracis-19036	113	21	is	be	AUX
bracis-19036	113	22	replaced	replace	VERB
bracis-19036	113	23	and	and	CCONJ
bracis-19036	113	24	operates	operate	VERB
bracis-19036	113	25	in	in	ADP
bracis-19036	113	26	the	the	DET
bracis-19036	113	27	phenotype	phenotype	NOUN
bracis-19036	113	28	space	space	NOUN
bracis-19036	113	29	.	.	PUNCT
bracis-19036	114	1	the	the	DET
bracis-19036	114	2	somo	somo	PROPN
bracis-19036	114	3	steps	step	NOUN
bracis-19036	114	4	are	be	AUX
bracis-19036	114	5	presented	present	VERB
bracis-19036	114	6	in	in	ADP
bracis-19036	114	7	algorithm	algorithm	NOUN
bracis-19036	114	8	 	 	SPACE
bracis-19036	114	9	1	1	NUM
bracis-19036	114	10	,	,	PUNCT
bracis-19036	114	11	which	which	PRON
bracis-19036	114	12	can	can	AUX
bracis-19036	114	13	be	be	AUX
bracis-19036	114	14	summarized	summarize	VERB
bracis-19036	114	15	as	as	ADP
bracis-19036	114	16	:	:	PUNCT
bracis-19036	114	17	(	(	PUNCT
bracis-19036	114	18	i	i	NOUN
bracis-19036	114	19	)	)	PUNCT
bracis-19036	114	20	all	all	DET
bracis-19036	114	21	inactive	inactive	ADJ
bracis-19036	114	22	nodes	node	NOUN
bracis-19036	114	23	have	have	VERB
bracis-19036	114	24	their	their	PRON
bracis-19036	114	25	inputs	input	NOUN
bracis-19036	114	26	changed	change	VERB
bracis-19036	114	27	randomly	randomly	ADV
bracis-19036	114	28	to	to	ADP
bracis-19036	114	29	another	another	DET
bracis-19036	114	30	valid	valid	ADJ
bracis-19036	114	31	value	value	NOUN
bracis-19036	114	32	;	;	PUNCT
bracis-19036	114	33	functions	function	NOUN
bracis-19036	114	34	are	be	AUX
bracis-19036	114	35	changed	change	VERB
bracis-19036	114	36	with	with	ADP
bracis-19036	114	37	a	a	DET
bracis-19036	114	38	probability	probability	NOUN
bracis-19036	114	39	\(p_{f}\	\(p_{f}\	NOUN
bracis-19036	114	40	)	)	PUNCT
bracis-19036	114	41	;	;	PUNCT
bracis-19036	114	42	(	(	PUNCT
bracis-19036	114	43	ii	ii	NOUN
bracis-19036	114	44	)	)	PUNCT
bracis-19036	114	45	a	a	DET
bracis-19036	114	46	random	random	ADJ
bracis-19036	114	47	node	node	NOUN
bracis-19036	114	48	(	(	PUNCT
bracis-19036	114	49	c	c	NOUN
bracis-19036	114	50	)	)	PUNCT
bracis-19036	114	51	is	be	AUX
bracis-19036	114	52	chosen	choose	VERB
bracis-19036	114	53	,	,	PUNCT
bracis-19036	114	54	in	in	ADP
bracis-19036	114	55	order	order	NOUN
bracis-19036	114	56	to	to	PART
bracis-19036	114	57	be	be	AUX
bracis-19036	114	58	mutated	mutate	VERB
bracis-19036	114	59	using	use	VERB
bracis-19036	114	60	somo	somo	NOUN
bracis-19036	114	61	;	;	PUNCT
bracis-19036	114	62	(	(	PUNCT
bracis-19036	114	63	iii	iii	X
bracis-19036	114	64	)	)	PUNCT
bracis-19036	114	65	c	c	PROPN
bracis-19036	114	66	has	have	VERB
bracis-19036	114	67	its	its	PRON
bracis-19036	114	68	function	function	NOUN
bracis-19036	114	69	modified	modify	VERB
bracis-19036	114	70	randomly	randomly	ADV
bracis-19036	114	71	with	with	ADP
bracis-19036	114	72	a	a	DET
bracis-19036	114	73	probability	probability	NOUN
bracis-19036	114	74	\(p_{f}\	\(p_{f}\	NOUN
bracis-19036	114	75	)	)	PUNCT
bracis-19036	114	76	;	;	PUNCT
bracis-19036	114	77	(	(	PUNCT
bracis-19036	114	78	iv	iv	X
bracis-19036	114	79	)	)	PUNCT
bracis-19036	114	80	a	a	DET
bracis-19036	114	81	random	random	ADJ
bracis-19036	114	82	input	input	NOUN
bracis-19036	114	83	(	(	PUNCT
bracis-19036	114	84	e	e	NOUN
bracis-19036	114	85	)	)	PUNCT
bracis-19036	114	86	is	be	AUX
bracis-19036	114	87	chosen	choose	VERB
bracis-19036	114	88	from	from	ADP
bracis-19036	114	89	c.	c.	PROPN
bracis-19036	114	90	step	step	NOUN
bracis-19036	114	91	(	(	PUNCT
bracis-19036	114	92	i	i	NOUN
bracis-19036	114	93	)	)	PUNCT
bracis-19036	114	94	ensures	ensure	VERB
bracis-19036	114	95	that	that	SCONJ
bracis-19036	114	96	new	new	ADJ
bracis-19036	114	97	genetic	genetic	ADJ
bracis-19036	114	98	material	material	NOUN
bracis-19036	114	99	is	be	AUX
bracis-19036	114	100	generated	generate	VERB
bracis-19036	114	101	before	before	ADP
bracis-19036	114	102	performing	perform	VERB
bracis-19036	114	103	the	the	DET
bracis-19036	114	104	actual	actual	ADJ
bracis-19036	114	105	mutation	mutation	NOUN
bracis-19036	114	106	.	.	PUNCT
bracis-19036	115	1	with	with	ADP
bracis-19036	115	2	the	the	DET
bracis-19036	115	3	random	random	ADJ
bracis-19036	115	4	input	input	NOUN
bracis-19036	115	5	(	(	PUNCT
bracis-19036	115	6	e	e	NOUN
bracis-19036	115	7	)	)	PUNCT
bracis-19036	115	8	chosen	choose	VERB
bracis-19036	115	9	,	,	PUNCT
bracis-19036	115	10	somo	somo	PROPN
bracis-19036	115	11	identifies	identify	VERB
bracis-19036	115	12	the	the	DET
bracis-19036	115	13	best	good	ADJ
bracis-19036	115	14	input	input	NOUN
bracis-19036	115	15	considering	consider	VERB
bracis-19036	115	16	all	all	DET
bracis-19036	115	17	previous	previous	ADJ
bracis-19036	115	18	nodes	node	NOUN
bracis-19036	115	19	in	in	ADP
bracis-19036	115	20	the	the	DET
bracis-19036	115	21	genotype	genotype	NOUN
bracis-19036	115	22	and	and	CCONJ
bracis-19036	115	23	then	then	ADV
bracis-19036	115	24	performs	perform	VERB
bracis-19036	115	25	the	the	DET
bracis-19036	115	26	mutation	mutation	NOUN
bracis-19036	115	27	.	.	PUNCT
bracis-19036	116	1	the	the	DET
bracis-19036	116	2	identification	identification	NOUN
bracis-19036	116	3	of	of	ADP
bracis-19036	116	4	the	the	DET
bracis-19036	116	5	most	most	ADV
bracis-19036	116	6	suitable	suitable	ADJ
bracis-19036	116	7	node	node	NOUN
bracis-19036	116	8	is	be	AUX
bracis-19036	116	9	based	base	VERB
bracis-19036	116	10	on	on	ADP
bracis-19036	116	11	semantics	semantic	NOUN
bracis-19036	116	12	.	.	PUNCT
bracis-19036	117	1	initially	initially	ADV
bracis-19036	117	2	,	,	PUNCT
bracis-19036	117	3	it	it	PRON
bracis-19036	117	4	calculates	calculate	VERB
bracis-19036	117	5	the	the	DET
bracis-19036	117	6	score	score	NOUN
bracis-19036	117	7	of	of	ADP
bracis-19036	117	8	every	every	DET
bracis-19036	117	9	node	node	NOUN
bracis-19036	117	10	of	of	ADP
bracis-19036	117	11	the	the	DET
bracis-19036	117	12	genotype	genotype	NOUN
bracis-19036	117	13	that	that	PRON
bracis-19036	117	14	may	may	AUX
bracis-19036	117	15	be	be	AUX
bracis-19036	117	16	connected	connect	VERB
bracis-19036	117	17	to	to	ADP
bracis-19036	117	18	the	the	DET
bracis-19036	117	19	mutated	mutate	VERB
bracis-19036	117	20	node	node	PROPN
bracis-19036	117	21	c.	c.	NOUN
bracis-19036	117	22	if	if	SCONJ
bracis-19036	117	23	more	more	ADJ
bracis-19036	117	24	nodes	node	NOUN
bracis-19036	117	25	receive	receive	VERB
bracis-19036	117	26	the	the	DET
bracis-19036	117	27	same	same	ADJ
bracis-19036	117	28	score	score	NOUN
bracis-19036	117	29	,	,	PUNCT
bracis-19036	117	30	the	the	DET
bracis-19036	117	31	node	node	PROPN
bracis-19036	117	32	closest	close	ADJ
bracis-19036	117	33	to	to	ADP
bracis-19036	117	34	the	the	DET
bracis-19036	117	35	program	program	NOUN
bracis-19036	117	36	inputs	input	NOUN
bracis-19036	117	37	is	be	AUX
bracis-19036	117	38	preferred	prefer	VERB
bracis-19036	117	39	.	.	PUNCT
bracis-19036	118	1	the	the	DET
bracis-19036	118	2	score	score	NOUN
bracis-19036	118	3	reflects	reflect	VERB
bracis-19036	118	4	the	the	DET
bracis-19036	118	5	hamming	hamming	NOUN
bracis-19036	118	6	distance	distance	NOUN
bracis-19036	118	7	(	(	PUNCT
bracis-19036	118	8	hd	hd	NOUN
bracis-19036	118	9	)	)	PUNCT
bracis-19036	118	10	.	.	PUNCT
bracis-19036	119	1	in	in	ADP
bracis-19036	119	2	the	the	DET
bracis-19036	119	3	sequence	sequence	NOUN
bracis-19036	119	4	,	,	PUNCT
bracis-19036	119	5	all	all	DET
bracis-19036	119	6	left	left	ADJ
bracis-19036	119	7	-	-	PUNCT
bracis-19036	119	8	sided	side	VERB
bracis-19036	119	9	nodes	node	NOUN
bracis-19036	119	10	from	from	ADP
bracis-19036	119	11	the	the	DET
bracis-19036	119	12	mutated	mutate	VERB
bracis-19036	119	13	node	node	NOUN
bracis-19036	119	14	c	c	PROPN
bracis-19036	119	15	are	be	AUX
bracis-19036	119	16	connected	connect	VERB
bracis-19036	119	17	at	at	ADP
bracis-19036	119	18	e	e	NOUN
bracis-19036	119	19	and	and	CCONJ
bracis-19036	119	20	simulated	simulate	VERB
bracis-19036	119	21	in	in	ADP
bracis-19036	119	22	three	three	NUM
bracis-19036	119	23	different	different	ADJ
bracis-19036	119	24	ways	way	NOUN
bracis-19036	119	25	:	:	PUNCT
bracis-19036	119	26	(	(	PUNCT
bracis-19036	119	27	a	a	X
bracis-19036	119	28	)	)	PUNCT
bracis-19036	119	29	using	use	VERB
bracis-19036	119	30	the	the	DET
bracis-19036	119	31	function	function	NOUN
bracis-19036	119	32	of	of	ADP
bracis-19036	119	33	the	the	DET
bracis-19036	119	34	node	node	NOUN
bracis-19036	119	35	being	be	AUX
bracis-19036	119	36	connected	connect	VERB
bracis-19036	119	37	,	,	PUNCT
bracis-19036	119	38	(	(	PUNCT
bracis-19036	119	39	b	b	NOUN
bracis-19036	119	40	)	)	PUNCT
bracis-19036	119	41	forcing	force	VERB
bracis-19036	119	42	e	e	NOUN
bracis-19036	119	43	to	to	PART
bracis-19036	119	44	logic	logic	NOUN
bracis-19036	119	45	zero	zero	NUM
bracis-19036	119	46	(	(	PUNCT
bracis-19036	119	47	\(val^	\(val^	X
bracis-19036	119	48	{	{	PUNCT
bracis-19036	119	49	[	[	NOUN
bracis-19036	119	50	0]}_{e=0}\	0]}_{e=0}\	NUM
bracis-19036	119	51	)	)	PUNCT
bracis-19036	119	52	)	)	PUNCT
bracis-19036	119	53	,	,	PUNCT
bracis-19036	119	54	and	and	CCONJ
bracis-19036	119	55	(	(	PUNCT
bracis-19036	119	56	c	c	X
bracis-19036	119	57	)	)	PUNCT
bracis-19036	119	58	forcing	force	VERB
bracis-19036	119	59	e	e	NOUN
bracis-19036	119	60	to	to	ADP
bracis-19036	119	61	a	a	DET
bracis-19036	119	62	logic	logic	NOUN
bracis-19036	119	63	one	one	NUM
bracis-19036	119	64	(	(	PUNCT
bracis-19036	119	65	\(val^{[0]}_{e=1}\	\(val^{[0]}_{e=1}\	NUM
bracis-19036	119	66	)	)	PUNCT
bracis-19036	119	67	)	)	PUNCT
bracis-19036	119	68	.	.	PUNCT
bracis-19036	120	1	the	the	DET
bracis-19036	120	2	desired	desire	VERB
bracis-19036	120	3	input	input	NOUN
bracis-19036	120	4	value	value	NOUN
bracis-19036	120	5	is	be	AUX
bracis-19036	120	6	denoted	denote	VERB
bracis-19036	120	7	as	as	ADP
bracis-19036	120	8	req	req	NOUN
bracis-19036	120	9	and	and	CCONJ
bracis-19036	120	10	it	it	PRON
bracis-19036	120	11	can	can	AUX
bracis-19036	120	12	be	be	AUX
bracis-19036	120	13	equal	equal	ADJ
bracis-19036	120	14	to	to	ADP
bracis-19036	120	15	‘	'	PUNCT
bracis-19036	120	16	0	0	NUM
bracis-19036	120	17	’	'	PUNCT
bracis-19036	120	18	,	,	PUNCT
bracis-19036	120	19	‘	'	PUNCT
bracis-19036	120	20	1	1	NUM
bracis-19036	120	21	’	'	PUNCT
bracis-19036	120	22	or	or	CCONJ
bracis-19036	120	23	‘	'	PUNCT
bracis-19036	120	24	x	x	X
bracis-19036	120	25	’	'	PUNCT
bracis-19036	120	26	,	,	PUNCT
bracis-19036	120	27	where	where	SCONJ
bracis-19036	120	28	‘	'	PUNCT
bracis-19036	120	29	x	x	X
bracis-19036	120	30	’	'	PUNCT
bracis-19036	120	31	means	mean	VERB
bracis-19036	120	32	that	that	SCONJ
bracis-19036	120	33	it	it	PRON
bracis-19036	120	34	does	do	AUX
bracis-19036	120	35	not	not	PART
bracis-19036	120	36	matter	matter	VERB
bracis-19036	120	37	what	what	DET
bracis-19036	120	38	boolean	boolean	ADJ
bracis-19036	120	39	value	value	NOUN
bracis-19036	120	40	the	the	DET
bracis-19036	120	41	input	input	NOUN
bracis-19036	120	42	e	e	NOUN
bracis-19036	120	43	takes	take	VERB
bracis-19036	120	44	.	.	PUNCT
bracis-19036	121	1	the	the	DET
bracis-19036	121	2	value	value	NOUN
bracis-19036	121	3	of	of	ADP
bracis-19036	121	4	req	req	NOUN
bracis-19036	121	5	is	be	AUX
bracis-19036	121	6	determined	determine	VERB
bracis-19036	121	7	by	by	ADP
bracis-19036	121	8	using	use	VERB
bracis-19036	121	9	the	the	DET
bracis-19036	121	10	ternary	ternary	ADJ
bracis-19036	121	11	operator	operator	NOUN
bracis-19036	121	12	\	\	NOUN
bracis-19036	121	13	(	(	PUNCT
bracis-19036	121	14	{	{	PUNCT
bracis-19036	121	15	\theta	\theta	PROPN
bracis-19036	121	16	}	}	PUNCT
bracis-19036	121	17	\	\	PROPN
bracis-19036	121	18	)	)	PUNCT
bracis-19036	121	19	and	and	CCONJ
bracis-19036	121	20	the	the	DET
bracis-19036	121	21	reduction	reduction	NOUN
bracis-19036	121	22	operator	operator	NOUN
bracis-19036	121	23	\(\bigodot	\(\bigodot	NOUN
bracis-19036	121	24	\	\	NOUN
bracis-19036	121	25	)	)	PUNCT
bracis-19036	121	26	,	,	PUNCT
bracis-19036	121	27	defined	define	VERB
bracis-19036	121	28	in	in	ADP
bracis-19036	121	29	equations	equation	NOUN
bracis-19036	121	30	 	 	SPACE
bracis-19036	121	31	1	1	NUM
bracis-19036	121	32	and	and	CCONJ
bracis-19036	121	33	 	 	SPACE
bracis-19036	121	34	2	2	X
bracis-19036	121	35	.	.	PUNCT
bracis-19036	122	1	the	the	DET
bracis-19036	122	2	term	term	NOUN
bracis-19036	122	3	[	[	X
bracis-19036	122	4	o	o	X
bracis-19036	122	5	]	]	X
bracis-19036	122	6	in	in	ADP
bracis-19036	122	7	superscript	superscript	PROPN
bracis-19036	122	8	points	point	NOUN
bracis-19036	122	9	to	to	ADP
bracis-19036	122	10	a	a	DET
bracis-19036	122	11	boolean	boolean	ADJ
bracis-19036	122	12	value	value	NOUN
bracis-19036	122	13	associated	associate	VERB
bracis-19036	122	14	with	with	ADP
bracis-19036	122	15	a	a	DET
bracis-19036	122	16	program	program	NOUN
bracis-19036	122	17	output	output	NOUN
bracis-19036	122	18	node	node	NOUN
bracis-19036	122	19	o.	o.	PROPN
bracis-19036	122	20	in	in	ADP
bracis-19036	122	21	somo	somo	PROPN
bracis-19036	122	22	,	,	PUNCT
bracis-19036	122	23	the	the	DET
bracis-19036	122	24	mutated	mutate	VERB
bracis-19036	122	25	input	input	NOUN
bracis-19036	122	26	e	e	NOUN
bracis-19036	122	27	of	of	ADP
bracis-19036	122	28	c	c	PROPN
bracis-19036	122	29	is	be	AUX
bracis-19036	122	30	connected	connect	VERB
bracis-19036	122	31	to	to	ADP
bracis-19036	122	32	the	the	DET
bracis-19036	122	33	best	good	ADJ
bracis-19036	122	34	node	node	NOUN
bracis-19036	122	35	in	in	ADP
bracis-19036	122	36	the	the	DET
bracis-19036	122	37	genotype	genotype	NOUN
bracis-19036	122	38	of	of	ADP
bracis-19036	122	39	the	the	DET
bracis-19036	122	40	current	current	ADJ
bracis-19036	122	41	generation	generation	NOUN
bracis-19036	122	42	.	.	PUNCT
bracis-19036	123	1	differently	differently	ADV
bracis-19036	123	2	from	from	ADP
bracis-19036	123	3	the	the	DET
bracis-19036	123	4	standard	standard	PROPN
bracis-19036	123	5	cgp	cgp	PROPN
bracis-19036	123	6	,	,	PUNCT
bracis-19036	123	7	somo	somo	PROPN
bracis-19036	123	8	uses	use	VERB
bracis-19036	123	9	\(\lambda	\(\lambda	NOUN
bracis-19036	123	10	\	\	NOUN
bracis-19036	123	11	)	)	PUNCT
bracis-19036	124	1	=	=	SYM
bracis-19036	124	2	1	1	NUM
bracis-19036	124	3	and	and	CCONJ
bracis-19036	124	4	a	a	DET
bracis-19036	124	5	different	different	ADJ
bracis-19036	124	6	population	population	NOUN
bracis-19036	124	7	initialization	initialization	NOUN
bracis-19036	124	8	.	.	PUNCT
bracis-19036	125	1	in	in	ADP
bracis-19036	125	2	somo	somo	PROPN
bracis-19036	125	3	,	,	PUNCT
bracis-19036	125	4	the	the	DET
bracis-19036	125	5	population	population	NOUN
bracis-19036	125	6	is	be	AUX
bracis-19036	125	7	started	start	VERB
bracis-19036	125	8	with	with	ADP
bracis-19036	125	9	a	a	DET
bracis-19036	125	10	candidate	candidate	NOUN
bracis-19036	125	11	solution	solution	NOUN
bracis-19036	125	12	having	have	VERB
bracis-19036	125	13	no	no	DET
bracis-19036	125	14	active	active	ADJ
bracis-19036	125	15	gate	gate	NOUN
bracis-19036	125	16	in	in	ADP
bracis-19036	125	17	order	order	NOUN
bracis-19036	125	18	to	to	PART
bracis-19036	125	19	maximize	maximize	VERB
bracis-19036	125	20	the	the	DET
bracis-19036	125	21	efficiency	efficiency	NOUN
bracis-19036	125	22	and	and	CCONJ
bracis-19036	125	23	minimize	minimize	VERB
bracis-19036	125	24	the	the	DET
bracis-19036	125	25	number	number	NOUN
bracis-19036	125	26	of	of	ADP
bracis-19036	125	27	active	active	ADJ
bracis-19036	125	28	gates	gate	NOUN
bracis-19036	125	29	of	of	ADP
bracis-19036	125	30	the	the	DET
bracis-19036	125	31	evolved	evolved	ADJ
bracis-19036	125	32	solutions	solution	NOUN
bracis-19036	125	33	 	 	SPACE
bracis-19036	126	1	[	[	X
bracis-19036	126	2	11	11	NUM
bracis-19036	126	3	]	]	PUNCT
bracis-19036	126	4	.	.	PUNCT
bracis-19036	127	1	4	4	NUM
bracis-19036	127	2	proposal	proposal	NOUN
bracis-19036	127	3	and	and	CCONJ
bracis-19036	127	4	 	 	SPACE
bracis-19036	127	5	methods	method	NOUN
bracis-19036	127	6	here	here	ADV
bracis-19036	127	7	,	,	PUNCT
bracis-19036	127	8	we	we	PRON
bracis-19036	127	9	evaluate	evaluate	VERB
bracis-19036	127	10	different	different	ADJ
bracis-19036	127	11	approaches	approach	NOUN
bracis-19036	127	12	using	use	VERB
bracis-19036	127	13	somo	somo	NOUN
bracis-19036	127	14	aiming	aim	VERB
bracis-19036	127	15	at	at	ADP
bracis-19036	127	16	discovering	discover	VERB
bracis-19036	127	17	if	if	SCONJ
bracis-19036	127	18	using	use	VERB
bracis-19036	127	19	an	an	DET
bracis-19036	127	20	appropriate	appropriate	ADJ
bracis-19036	127	21	optimization	optimization	NOUN
bracis-19036	127	22	step	step	NOUN
bracis-19036	127	23	helps	help	VERB
bracis-19036	127	24	it	it	PRON
bracis-19036	127	25	to	to	PART
bracis-19036	127	26	obtain	obtain	VERB
bracis-19036	127	27	better	well	ADJ
bracis-19036	127	28	grns	grn	NOUN
bracis-19036	127	29	.	.	PUNCT
bracis-19036	128	1	we	we	PRON
bracis-19036	128	2	propose	propose	VERB
bracis-19036	128	3	the	the	DET
bracis-19036	128	4	use	use	NOUN
bracis-19036	128	5	of	of	ADP
bracis-19036	128	6	somo	somo	NOUN
bracis-19036	128	7	with	with	ADP
bracis-19036	128	8	sam	sam	PROPN
bracis-19036	128	9	as	as	ADP
bracis-19036	128	10	(	(	PUNCT
bracis-19036	128	11	i	i	NOUN
bracis-19036	128	12	)	)	PUNCT
bracis-19036	128	13	somo	somo	PROPN
bracis-19036	128	14	can	can	AUX
bracis-19036	128	15	obtain	obtain	VERB
bracis-19036	128	16	a	a	DET
bracis-19036	128	17	feasible	feasible	ADJ
bracis-19036	128	18	solution	solution	NOUN
bracis-19036	128	19	quickly	quickly	ADV
bracis-19036	128	20	but	but	CCONJ
bracis-19036	128	21	with	with	ADP
bracis-19036	128	22	many	many	ADJ
bracis-19036	128	23	logic	logic	NOUN
bracis-19036	128	24	elements	element	NOUN
bracis-19036	128	25	,	,	PUNCT
bracis-19036	128	26	and	and	CCONJ
bracis-19036	128	27	(	(	PUNCT
bracis-19036	128	28	ii	ii	NOUN
bracis-19036	128	29	)	)	PUNCT
bracis-19036	128	30	sam	sam	PROPN
bracis-19036	128	31	is	be	AUX
bracis-19036	128	32	appropriate	appropriate	ADJ
bracis-19036	128	33	for	for	ADP
bracis-19036	128	34	reducing	reduce	VERB
bracis-19036	128	35	the	the	DET
bracis-19036	128	36	number	number	NOUN
bracis-19036	128	37	of	of	ADP
bracis-19036	128	38	logic	logic	NOUN
bracis-19036	128	39	elements	element	NOUN
bracis-19036	128	40	.	.	PUNCT
bracis-19036	129	1	the	the	DET
bracis-19036	129	2	proposal	proposal	NOUN
bracis-19036	129	3	is	be	AUX
bracis-19036	129	4	presented	present	VERB
bracis-19036	129	5	in	in	ADP
bracis-19036	129	6	algorithm	algorithm	NOUN
bracis-19036	129	7	 	 	SPACE
bracis-19036	129	8	2	2	NUM
bracis-19036	129	9	.	.	PUNCT
bracis-19036	130	1	in	in	ADP
bracis-19036	130	2	 	 	SPACE
bracis-19036	130	3	[	[	PUNCT
bracis-19036	130	4	11	11	NUM
bracis-19036	130	5	]	]	PUNCT
bracis-19036	130	6	,	,	PUNCT
bracis-19036	130	7	the	the	DET
bracis-19036	130	8	percentage	percentage	NOUN
bracis-19036	130	9	of	of	ADP
bracis-19036	130	10	inactive	inactive	ADJ
bracis-19036	130	11	nodes	node	NOUN
bracis-19036	130	12	to	to	PART
bracis-19036	130	13	be	be	AUX
bracis-19036	130	14	mutated	mutate	VERB
bracis-19036	130	15	(	(	PUNCT
bracis-19036	130	16	\(p_{q}\	\(p_{q}\	NOUN
bracis-19036	130	17	)	)	PUNCT
bracis-19036	130	18	)	)	PUNCT
bracis-19036	130	19	is	be	AUX
bracis-19036	130	20	equal	equal	ADJ
bracis-19036	130	21	to	to	ADP
bracis-19036	130	22	100	100	NUM
bracis-19036	130	23	.	.	PUNCT
bracis-19036	131	1	here	here	ADV
bracis-19036	131	2	,	,	PUNCT
bracis-19036	131	3	we	we	PRON
bracis-19036	131	4	analyze	analyze	VERB
bracis-19036	131	5	the	the	DET
bracis-19036	131	6	performance	performance	NOUN
bracis-19036	131	7	of	of	ADP
bracis-19036	131	8	somo	somo	NOUN
bracis-19036	131	9	when	when	SCONJ
bracis-19036	131	10	using	use	VERB
bracis-19036	131	11	\(p_{q}\	\(p_{q}\	NOUN
bracis-19036	131	12	)	)	PUNCT
bracis-19036	131	13	=	=	PUNCT
bracis-19036	131	14	50	50	NUM
bracis-19036	131	15	%	%	NOUN
bracis-19036	131	16	with	with	ADP
bracis-19036	131	17	sam	sam	PROPN
bracis-19036	131	18	as	as	ADP
bracis-19036	131	19	optimization	optimization	NOUN
bracis-19036	131	20	step	step	NOUN
bracis-19036	131	21	.	.	PUNCT
bracis-19036	132	1	in	in	ADP
bracis-19036	132	2	addition	addition	NOUN
bracis-19036	132	3	,	,	PUNCT
bracis-19036	132	4	as	as	SCONJ
bracis-19036	132	5	highlighted	highlight	VERB
bracis-19036	132	6	in	in	ADP
bracis-19036	132	7	 	 	SPACE
bracis-19036	132	8	[	[	PUNCT
bracis-19036	132	9	11	11	NUM
bracis-19036	132	10	]	]	PUNCT
bracis-19036	132	11	,	,	PUNCT
bracis-19036	132	12	somo	somo	PROPN
bracis-19036	132	13	usually	usually	ADV
bracis-19036	132	14	gets	get	AUX
bracis-19036	132	15	stuck	stuck	ADJ
bracis-19036	132	16	in	in	ADP
bracis-19036	132	17	local	local	ADJ
bracis-19036	132	18	optima	optima	NOUN
bracis-19036	132	19	.	.	PUNCT
bracis-19036	133	1	to	to	PART
bracis-19036	133	2	avoid	avoid	VERB
bracis-19036	133	3	this	this	DET
bracis-19036	133	4	issue	issue	NOUN
bracis-19036	133	5	,	,	PUNCT
bracis-19036	133	6	we	we	PRON
bracis-19036	133	7	use	use	VERB
bracis-19036	133	8	a	a	DET
bracis-19036	133	9	restart	restart	NOUN
bracis-19036	133	10	strategy	strategy	NOUN
bracis-19036	133	11	for	for	ADP
bracis-19036	133	12	exploiting	exploit	VERB
bracis-19036	133	13	different	different	ADJ
bracis-19036	133	14	locations	location	NOUN
bracis-19036	133	15	of	of	ADP
bracis-19036	133	16	the	the	DET
bracis-19036	133	17	search	search	NOUN
bracis-19036	133	18	space	space	NOUN
bracis-19036	133	19	.	.	PUNCT
bracis-19036	134	1	the	the	DET
bracis-19036	134	2	restart	restart	NOUN
bracis-19036	134	3	strategy	strategy	NOUN
bracis-19036	134	4	consists	consist	VERB
bracis-19036	134	5	of	of	ADP
bracis-19036	134	6	initializing	initialize	VERB
bracis-19036	134	7	a	a	DET
bracis-19036	134	8	new	new	ADJ
bracis-19036	134	9	population	population	NOUN
bracis-19036	134	10	and	and	CCONJ
bracis-19036	134	11	restart	restart	VERB
bracis-19036	134	12	the	the	DET
bracis-19036	134	13	search	search	NOUN
bracis-19036	134	14	for	for	ADP
bracis-19036	134	15	every	every	DET
bracis-19036	134	16	k	k	PROPN
bracis-19036	134	17	objective	objective	ADJ
bracis-19036	134	18	function	function	NOUN
bracis-19036	134	19	evaluations	evaluation	NOUN
bracis-19036	134	20	.	.	PUNCT
bracis-19036	135	1	the	the	DET
bracis-19036	135	2	criteria	criterion	NOUN
bracis-19036	135	3	for	for	ADP
bracis-19036	135	4	evaluating	evaluate	VERB
bracis-19036	135	5	and	and	CCONJ
bracis-19036	135	6	comparing	compare	VERB
bracis-19036	135	7	methods	method	NOUN
bracis-19036	135	8	are	be	AUX
bracis-19036	135	9	varied	varied	ADJ
bracis-19036	135	10	,	,	PUNCT
bracis-19036	135	11	but	but	CCONJ
bracis-19036	135	12	[	[	X
bracis-19036	135	13	20	20	NUM
bracis-19036	135	14	]	]	PUNCT
bracis-19036	135	15	presented	present	VERB
bracis-19036	135	16	a	a	DET
bracis-19036	135	17	set	set	NOUN
bracis-19036	135	18	of	of	ADP
bracis-19036	135	19	benchmark	benchmark	NOUN
bracis-19036	135	20	problems	problem	NOUN
bracis-19036	135	21	when	when	SCONJ
bracis-19036	135	22	considering	consider	VERB
bracis-19036	135	23	scrna	scrna	NOUN
bracis-19036	135	24	-	-	PUNCT
bracis-19036	135	25	seq	seq	NOUN
bracis-19036	135	26	data	datum	NOUN
bracis-19036	135	27	for	for	ADP
bracis-19036	135	28	inferring	infer	VERB
bracis-19036	135	29	grns	grn	NOUN
bracis-19036	135	30	.	.	PUNCT
bracis-19036	136	1	this	this	DET
bracis-19036	136	2	set	set	NOUN
bracis-19036	136	3	is	be	AUX
bracis-19036	136	4	composed	compose	VERB
bracis-19036	136	5	of	of	ADP
bracis-19036	136	6	toy	toy	NOUN
bracis-19036	136	7	,	,	PUNCT
bracis-19036	136	8	curated	curate	VERB
bracis-19036	136	9	,	,	PUNCT
bracis-19036	136	10	and	and	CCONJ
bracis-19036	136	11	real	real	ADJ
bracis-19036	136	12	datasets	dataset	NOUN
bracis-19036	136	13	.	.	PUNCT
bracis-19036	137	1	for	for	ADP
bracis-19036	137	2	toy	toy	NOUN
bracis-19036	137	3	and	and	CCONJ
bracis-19036	137	4	curated	curate	VERB
bracis-19036	137	5	models	model	NOUN
bracis-19036	137	6	,	,	PUNCT
bracis-19036	137	7	we	we	PRON
bracis-19036	137	8	have	have	VERB
bracis-19036	137	9	the	the	DET
bracis-19036	137	10	ground	ground	NOUN
bracis-19036	137	11	-	-	PUNCT
bracis-19036	137	12	truth	truth	NOUN
bracis-19036	137	13	network	network	NOUN
bracis-19036	137	14	,	,	PUNCT
bracis-19036	137	15	which	which	PRON
bracis-19036	137	16	facilitates	facilitate	VERB
bracis-19036	137	17	the	the	DET
bracis-19036	137	18	evaluation	evaluation	NOUN
bracis-19036	137	19	of	of	ADP
bracis-19036	137	20	new	new	ADJ
bracis-19036	137	21	methods	method	NOUN
bracis-19036	137	22	.	.	PUNCT
bracis-19036	138	1	also	also	ADV
bracis-19036	138	2	,	,	PUNCT
bracis-19036	138	3	there	there	PRON
bracis-19036	138	4	is	be	VERB
bracis-19036	138	5	an	an	DET
bracis-19036	138	6	extensive	extensive	ADJ
bracis-19036	138	7	comparison	comparison	NOUN
bracis-19036	138	8	between	between	ADP
bracis-19036	138	9	several	several	ADJ
bracis-19036	138	10	algorithms	algorithm	NOUN
bracis-19036	138	11	from	from	ADP
bracis-19036	138	12	the	the	DET
bracis-19036	138	13	literature	literature	NOUN
bracis-19036	138	14	using	use	VERB
bracis-19036	138	15	the	the	DET
bracis-19036	138	16	pipeline	pipeline	NOUN
bracis-19036	138	17	provided	provide	VERB
bracis-19036	138	18	in	in	ADP
bracis-19036	138	19	[	[	X
bracis-19036	138	20	20	20	NUM
bracis-19036	138	21	]	]	PUNCT
bracis-19036	138	22	.	.	PUNCT
bracis-19036	139	1	in	in	ADP
bracis-19036	139	2	this	this	DET
bracis-19036	139	3	paper	paper	NOUN
bracis-19036	139	4	,	,	PUNCT
bracis-19036	139	5	we	we	PRON
bracis-19036	139	6	use	use	VERB
bracis-19036	139	7	curated	curate	VERB
bracis-19036	139	8	scrna	scrna	NOUN
bracis-19036	139	9	-	-	PUNCT
bracis-19036	139	10	seq	seq	NOUN
bracis-19036	139	11	data	datum	NOUN
bracis-19036	139	12	in	in	ADP
bracis-19036	139	13	the	the	DET
bracis-19036	139	14	form	form	NOUN
bracis-19036	139	15	of	of	ADP
bracis-19036	139	16	pseudotime	pseudotime	ADJ
bracis-19036	139	17	-	-	PUNCT
bracis-19036	139	18	series	series	NOUN
bracis-19036	139	19	.	.	PUNCT
bracis-19036	140	1	these	these	DET
bracis-19036	140	2	datasets	dataset	NOUN
bracis-19036	140	3	were	be	AUX
bracis-19036	140	4	made	make	VERB
bracis-19036	140	5	considering	consider	VERB
bracis-19036	140	6	2,000	2,000	NUM
bracis-19036	140	7	cells	cell	NOUN
bracis-19036	140	8	with	with	ADP
bracis-19036	140	9	three	three	NUM
bracis-19036	140	10	configurations	configuration	NOUN
bracis-19036	140	11	:	:	PUNCT
bracis-19036	140	12	0	0	NUM
bracis-19036	140	13	%	%	NOUN
bracis-19036	140	14	,	,	PUNCT
bracis-19036	140	15	50	50	NUM
bracis-19036	140	16	%	%	NOUN
bracis-19036	140	17	,	,	PUNCT
bracis-19036	140	18	and	and	CCONJ
bracis-19036	140	19	70	70	NUM
bracis-19036	140	20	%	%	NOUN
bracis-19036	140	21	dropout	dropout	NOUN
bracis-19036	140	22	rates	rate	NOUN
bracis-19036	140	23	.	.	PUNCT
bracis-19036	141	1	for	for	ADP
bracis-19036	141	2	each	each	DET
bracis-19036	141	3	configuration	configuration	NOUN
bracis-19036	141	4	,	,	PUNCT
bracis-19036	141	5	10	10	NUM
bracis-19036	141	6	datasets	dataset	NOUN
bracis-19036	141	7	are	be	AUX
bracis-19036	141	8	given	give	VERB
bracis-19036	141	9	.	.	PUNCT
bracis-19036	142	1	furthermore	furthermore	ADV
bracis-19036	142	2	,	,	PUNCT
bracis-19036	142	3	each	each	DET
bracis-19036	142	4	problem	problem	NOUN
bracis-19036	142	5	has	have	VERB
bracis-19036	142	6	a	a	DET
bracis-19036	142	7	different	different	ADJ
bracis-19036	142	8	number	number	NOUN
bracis-19036	142	9	of	of	ADP
bracis-19036	142	10	pseudotimes	pseudotime	NOUN
bracis-19036	142	11	.	.	PUNCT
bracis-19036	143	1	as	as	SCONJ
bracis-19036	143	2	each	each	DET
bracis-19036	143	3	pseudotime	pseudotime	NOUN
bracis-19036	143	4	gives	give	VERB
bracis-19036	143	5	information	information	NOUN
bracis-19036	143	6	about	about	ADP
bracis-19036	143	7	one	one	NUM
bracis-19036	143	8	possible	possible	ADJ
bracis-19036	143	9	cell	cell	NOUN
bracis-19036	143	10	trajectory	trajectory	NOUN
bracis-19036	143	11	,	,	PUNCT
bracis-19036	143	12	for	for	ADP
bracis-19036	143	13	each	each	DET
bracis-19036	143	14	pseudotime	pseudotime	NOUN
bracis-19036	144	1	one	one	NUM
bracis-19036	144	2	grn	grn	PROPN
bracis-19036	144	3	is	be	AUX
bracis-19036	144	4	inferred	infer	VERB
bracis-19036	144	5	.	.	PUNCT
bracis-19036	145	1	then	then	ADV
bracis-19036	145	2	,	,	PUNCT
bracis-19036	145	3	the	the	DET
bracis-19036	145	4	final	final	ADJ
bracis-19036	145	5	grn	grn	PROPN
bracis-19036	145	6	is	be	AUX
bracis-19036	145	7	given	give	VERB
bracis-19036	145	8	by	by	ADP
bracis-19036	145	9	merging	merge	VERB
bracis-19036	145	10	the	the	DET
bracis-19036	145	11	partial	partial	ADJ
bracis-19036	145	12	grns	grn	NOUN
bracis-19036	145	13	discovered	discover	VERB
bracis-19036	145	14	for	for	ADP
bracis-19036	145	15	each	each	DET
bracis-19036	145	16	pseudotime	pseudotime	NOUN
bracis-19036	145	17	.	.	PUNCT
bracis-19036	146	1	this	this	DET
bracis-19036	146	2	final	final	ADJ
bracis-19036	146	3	grn	grn	PROPN
bracis-19036	146	4	is	be	AUX
bracis-19036	146	5	evaluated	evaluate	VERB
bracis-19036	146	6	considering	consider	VERB
bracis-19036	146	7	the	the	DET
bracis-19036	146	8	pipeline	pipeline	NOUN
bracis-19036	146	9	presented	present	VERB
bracis-19036	146	10	in	in	ADP
bracis-19036	146	11	 	 	SPACE
bracis-19036	146	12	[	[	X
bracis-19036	146	13	20	20	NUM
bracis-19036	146	14	]	]	PUNCT
bracis-19036	146	15	which	which	PRON
bracis-19036	146	16	considers	consider	VERB
bracis-19036	146	17	the	the	DET
bracis-19036	146	18	area	area	NOUN
bracis-19036	146	19	under	under	ADP
bracis-19036	146	20	the	the	DET
bracis-19036	146	21	precision	precision	NOUN
bracis-19036	146	22	-	-	PUNCT
bracis-19036	146	23	recall	recall	NOUN
bracis-19036	146	24	curve	curve	NOUN
bracis-19036	146	25	(	(	PUNCT
bracis-19036	146	26	auprc	auprc	ADJ
bracis-19036	146	27	)	)	PUNCT
bracis-19036	146	28	and	and	CCONJ
bracis-19036	146	29	the	the	DET
bracis-19036	146	30	area	area	NOUN
bracis-19036	146	31	under	under	ADP
bracis-19036	146	32	the	the	DET
bracis-19036	146	33	receiver	receiver	NOUN
bracis-19036	146	34	operating	operate	VERB
bracis-19036	146	35	characteristic	characteristic	ADJ
bracis-19036	146	36	curve	curve	NOUN
bracis-19036	146	37	(	(	PUNCT
bracis-19036	146	38	auroc	auroc	NOUN
bracis-19036	146	39	)	)	PUNCT
bracis-19036	146	40	values	value	NOUN
bracis-19036	146	41	for	for	ADP
bracis-19036	146	42	comparison	comparison	NOUN
bracis-19036	146	43	.	.	PUNCT
bracis-19036	147	1	auprc	auprc	PROPN
bracis-19036	147	2	is	be	AUX
bracis-19036	147	3	calculated	calculate	VERB
bracis-19036	147	4	as	as	ADP
bracis-19036	147	5	the	the	DET
bracis-19036	147	6	area	area	NOUN
bracis-19036	147	7	under	under	ADP
bracis-19036	147	8	the	the	DET
bracis-19036	147	9	precision	precision	NOUN
bracis-19036	147	10	-	-	PUNCT
bracis-19036	147	11	recall	recall	NOUN
bracis-19036	147	12	(	(	PUNCT
bracis-19036	147	13	pr	pr	NOUN
bracis-19036	147	14	)	)	PUNCT
bracis-19036	147	15	curve	curve	NOUN
bracis-19036	147	16	and	and	CCONJ
bracis-19036	147	17	shows	show	VERB
bracis-19036	147	18	the	the	DET
bracis-19036	147	19	trade	trade	NOUN
bracis-19036	147	20	-	-	PUNCT
bracis-19036	147	21	off	off	NOUN
bracis-19036	147	22	between	between	ADP
bracis-19036	147	23	precision	precision	NOUN
bracis-19036	147	24	and	and	CCONJ
bracis-19036	147	25	recall	recall	NOUN
bracis-19036	147	26	across	across	ADP
bracis-19036	147	27	different	different	ADJ
bracis-19036	147	28	decision	decision	NOUN
bracis-19036	147	29	thresholds	threshold	NOUN
bracis-19036	147	30	.	.	PUNCT
bracis-19036	148	1	the	the	DET
bracis-19036	148	2	x	x	NOUN
bracis-19036	148	3	-	-	NOUN
bracis-19036	148	4	axis	axis	NOUN
bracis-19036	148	5	of	of	ADP
bracis-19036	148	6	a	a	DET
bracis-19036	148	7	pr	pr	NOUN
bracis-19036	148	8	curve	curve	NOUN
bracis-19036	148	9	is	be	AUX
bracis-19036	148	10	the	the	DET
bracis-19036	148	11	recall	recall	NOUN
bracis-19036	148	12	and	and	CCONJ
bracis-19036	148	13	the	the	DET
bracis-19036	148	14	x	x	NOUN
bracis-19036	148	15	-	-	NOUN
bracis-19036	148	16	axis	axis	NOUN
bracis-19036	148	17	is	be	AUX
bracis-19036	148	18	the	the	DET
bracis-19036	148	19	false	false	ADJ
bracis-19036	148	20	-	-	PUNCT
bracis-19036	148	21	positive	positive	ADJ
bracis-19036	148	22	ratio	ratio	NOUN
bracis-19036	148	23	(	(	PUNCT
bracis-19036	148	24	fpr	fpr	NOUN
bracis-19036	148	25	)	)	PUNCT
bracis-19036	148	26	.	.	PUNCT
bracis-19036	149	1	considering	consider	VERB
bracis-19036	149	2	tp	tp	PRON
bracis-19036	149	3	as	as	ADP
bracis-19036	149	4	true	true	ADJ
bracis-19036	149	5	positive	positive	ADJ
bracis-19036	149	6	,	,	PUNCT
bracis-19036	149	7	fp	fp	INTJ
bracis-19036	149	8	as	as	ADP
bracis-19036	149	9	false	false	ADJ
bracis-19036	149	10	positive	positive	ADJ
bracis-19036	149	11	and	and	CCONJ
bracis-19036	149	12	fn	fn	NOUN
bracis-19036	149	13	as	as	ADP
bracis-19036	149	14	false	false	ADJ
bracis-19036	149	15	negative	negative	ADJ
bracis-19036	149	16	,	,	PUNCT
bracis-19036	149	17	we	we	PRON
bracis-19036	149	18	can	can	AUX
bracis-19036	149	19	define	define	VERB
bracis-19036	149	20	precision	precision	NOUN
bracis-19036	149	21	=	=	SYM
bracis-19036	149	22	\(\frac{tp}{tp+fp}\	\(\frac{tp}{tp+fp}\	PROPN
bracis-19036	149	23	)	)	PUNCT
bracis-19036	149	24	and	and	CCONJ
bracis-19036	149	25	recall	recall	NOUN
bracis-19036	149	26	=	=	SYM
bracis-19036	149	27	\(\frac{tp}{tp+fn}\	\(\frac{tp}{tp+fn}\	PROPN
bracis-19036	149	28	)	)	PUNCT
bracis-19036	149	29	.	.	PUNCT
bracis-19036	150	1	for	for	ADP
bracis-19036	150	2	auroc	auroc	NOUN
bracis-19036	150	3	,	,	PUNCT
bracis-19036	150	4	the	the	DET
bracis-19036	150	5	roc	roc	PROPN
bracis-19036	150	6	curve	curve	NOUN
bracis-19036	150	7	is	be	AUX
bracis-19036	150	8	plotted	plot	VERB
bracis-19036	150	9	considering	consider	VERB
bracis-19036	150	10	the	the	DET
bracis-19036	150	11	false	false	ADJ
bracis-19036	150	12	-	-	PUNCT
bracis-19036	150	13	positive	positive	ADJ
bracis-19036	150	14	ratio	ratio	NOUN
bracis-19036	150	15	(	(	PUNCT
bracis-19036	150	16	fpr	fpr	NOUN
bracis-19036	150	17	)	)	PUNCT
bracis-19036	150	18	on	on	ADP
bracis-19036	150	19	the	the	DET
bracis-19036	150	20	x	x	NOUN
bracis-19036	150	21	-	-	NOUN
bracis-19036	150	22	axis	axis	NOUN
bracis-19036	150	23	and	and	CCONJ
bracis-19036	150	24	the	the	DET
bracis-19036	150	25	recall	recall	NOUN
bracis-19036	150	26	,	,	PUNCT
bracis-19036	150	27	on	on	ADP
bracis-19036	150	28	the	the	DET
bracis-19036	150	29	y	y	NOUN
bracis-19036	150	30	-	-	PUNCT
bracis-19036	150	31	axis	axis	NOUN
bracis-19036	150	32	.	.	PUNCT
bracis-19036	151	1	recall	recall	PROPN
bracis-19036	151	2	was	be	AUX
bracis-19036	151	3	defined	define	VERB
bracis-19036	151	4	previously	previously	ADV
bracis-19036	151	5	and	and	CCONJ
bracis-19036	151	6	fpr	fpr	PRON
bracis-19036	151	7	=	=	SYM
bracis-19036	151	8	\(\frac{fp}{tn+fp}\	\(\frac{fp}{tn+fp}\	PROPN
bracis-19036	151	9	)	)	PUNCT
bracis-19036	151	10	.	.	PUNCT
bracis-19036	152	1	an	an	DET
bracis-19036	152	2	excellent	excellent	ADJ
bracis-19036	152	3	model	model	NOUN
bracis-19036	152	4	has	have	AUX
bracis-19036	152	5	auc	auc	VERB
bracis-19036	152	6	close	close	ADV
bracis-19036	152	7	to	to	ADP
bracis-19036	152	8	1	1	NUM
bracis-19036	152	9	,	,	PUNCT
bracis-19036	152	10	which	which	PRON
bracis-19036	152	11	means	mean	VERB
bracis-19036	152	12	it	it	PRON
bracis-19036	152	13	has	have	VERB
bracis-19036	152	14	good	good	ADJ
bracis-19036	152	15	separability	separability	NOUN
bracis-19036	152	16	.	.	PUNCT
bracis-19036	153	1	for	for	ADP
bracis-19036	153	2	many	many	ADJ
bracis-19036	153	3	real	real	ADJ
bracis-19036	153	4	-	-	PUNCT
bracis-19036	153	5	world	world	NOUN
bracis-19036	153	6	datasets	dataset	NOUN
bracis-19036	153	7	,	,	PUNCT
bracis-19036	153	8	particularly	particularly	ADV
bracis-19036	153	9	medical	medical	ADJ
bracis-19036	153	10	datasets	dataset	NOUN
bracis-19036	153	11	,	,	PUNCT
bracis-19036	153	12	the	the	DET
bracis-19036	153	13	fraction	fraction	NOUN
bracis-19036	153	14	of	of	ADP
bracis-19036	153	15	positives	positive	NOUN
bracis-19036	153	16	is	be	AUX
bracis-19036	153	17	often	often	ADV
bracis-19036	153	18	less	less	ADJ
bracis-19036	153	19	than	than	ADP
bracis-19036	153	20	0.5	0.5	NUM
bracis-19036	153	21	,	,	PUNCT
bracis-19036	153	22	meaning	mean	VERB
bracis-19036	153	23	that	that	SCONJ
bracis-19036	153	24	auprc	auprc	PROPN
bracis-19036	153	25	has	have	VERB
bracis-19036	153	26	a	a	DET
bracis-19036	153	27	lower	low	ADJ
bracis-19036	153	28	baseline	baseline	NOUN
bracis-19036	153	29	value	value	NOUN
bracis-19036	153	30	than	than	ADP
bracis-19036	153	31	auroc	auroc	NOUN
bracis-19036	153	32	 	 	SPACE
bracis-19036	154	1	[	[	X
bracis-19036	154	2	6	6	NUM
bracis-19036	154	3	]	]	PUNCT
bracis-19036	154	4	.	.	PUNCT
bracis-19036	155	1	5	5	NUM
bracis-19036	155	2	computational	computational	ADJ
bracis-19036	155	3	experiments	experiment	NOUN
bracis-19036	155	4	computational	computational	ADJ
bracis-19036	155	5	experiments	experiment	NOUN
bracis-19036	155	6	were	be	AUX
bracis-19036	155	7	conducted	conduct	VERB
bracis-19036	155	8	to	to	PART
bracis-19036	155	9	analyze	analyze	VERB
bracis-19036	155	10	the	the	DET
bracis-19036	155	11	performance	performance	NOUN
bracis-19036	155	12	of	of	ADP
bracis-19036	155	13	cgp	cgp	PROPN
bracis-19036	155	14	mutation	mutation	NOUN
bracis-19036	155	15	operators	operator	NOUN
bracis-19036	155	16	when	when	SCONJ
bracis-19036	155	17	applied	apply	VERB
bracis-19036	155	18	to	to	ADP
bracis-19036	155	19	the	the	DET
bracis-19036	155	20	inference	inference	NOUN
bracis-19036	155	21	of	of	ADP
bracis-19036	155	22	grns	grn	NOUN
bracis-19036	155	23	using	use	VERB
bracis-19036	155	24	the	the	DET
bracis-19036	155	25	benchmark	benchmark	NOUN
bracis-19036	155	26	scrna	scrna	NOUN
bracis-19036	155	27	-	-	PUNCT
bracis-19036	155	28	seq	seq	NOUN
bracis-19036	155	29	time	time	NOUN
bracis-19036	155	30	-	-	PUNCT
bracis-19036	155	31	series	series	NOUN
bracis-19036	155	32	data	datum	NOUN
bracis-19036	155	33	from	from	ADP
bracis-19036	155	34	 	 	SPACE
bracis-19036	155	35	[	[	X
bracis-19036	155	36	20	20	NUM
bracis-19036	155	37	]	]	PUNCT
bracis-19036	155	38	.	.	PUNCT
bracis-19036	156	1	here	here	ADV
bracis-19036	156	2	,	,	PUNCT
bracis-19036	156	3	we	we	PRON
bracis-19036	156	4	highlight	highlight	VERB
bracis-19036	156	5	whether	whether	SCONJ
bracis-19036	156	6	obtaining	obtain	VERB
bracis-19036	156	7	feasible	feasible	ADJ
bracis-19036	156	8	solutions	solution	NOUN
bracis-19036	156	9	in	in	ADP
bracis-19036	156	10	a	a	DET
bracis-19036	156	11	faster	fast	ADJ
bracis-19036	156	12	way	way	NOUN
bracis-19036	156	13	has	have	VERB
bracis-19036	156	14	a	a	DET
bracis-19036	156	15	positive	positive	ADJ
bracis-19036	156	16	impact	impact	NOUN
bracis-19036	156	17	on	on	ADP
bracis-19036	156	18	the	the	DET
bracis-19036	156	19	quality	quality	NOUN
bracis-19036	156	20	of	of	ADP
bracis-19036	156	21	the	the	DET
bracis-19036	156	22	solutions	solution	NOUN
bracis-19036	156	23	.	.	PUNCT
bracis-19036	157	1	also	also	ADV
bracis-19036	157	2	,	,	PUNCT
bracis-19036	157	3	we	we	PRON
bracis-19036	157	4	analyze	analyze	VERB
bracis-19036	157	5	the	the	DET
bracis-19036	157	6	importance	importance	NOUN
bracis-19036	157	7	of	of	ADP
bracis-19036	157	8	reducing	reduce	VERB
bracis-19036	157	9	the	the	DET
bracis-19036	157	10	number	number	NOUN
bracis-19036	157	11	of	of	ADP
bracis-19036	157	12	logic	logic	NOUN
bracis-19036	157	13	elements	element	NOUN
bracis-19036	157	14	.	.	PUNCT
bracis-19036	158	1	the	the	DET
bracis-19036	158	2	computational	computational	ADJ
bracis-19036	158	3	experiments	experiment	NOUN
bracis-19036	158	4	are	be	AUX
bracis-19036	158	5	composed	compose	VERB
bracis-19036	158	6	of	of	ADP
bracis-19036	158	7	two	two	NUM
bracis-19036	158	8	parts	part	NOUN
bracis-19036	158	9	:	:	PUNCT
bracis-19036	158	10	(	(	PUNCT
bracis-19036	158	11	i	i	NOUN
bracis-19036	158	12	)	)	PUNCT
bracis-19036	158	13	the	the	DET
bracis-19036	158	14	performance	performance	NOUN
bracis-19036	158	15	of	of	ADP
bracis-19036	158	16	cgp	cgp	PROPN
bracis-19036	158	17	variants	variant	NOUN
bracis-19036	158	18	are	be	AUX
bracis-19036	158	19	compared	compare	VERB
bracis-19036	158	20	and	and	CCONJ
bracis-19036	158	21	,	,	PUNCT
bracis-19036	158	22	(	(	PUNCT
bracis-19036	158	23	ii	ii	NOUN
bracis-19036	158	24	)	)	PUNCT
bracis-19036	158	25	the	the	DET
bracis-19036	158	26	results	result	NOUN
bracis-19036	158	27	obtained	obtain	VERB
bracis-19036	158	28	by	by	ADP
bracis-19036	158	29	the	the	DET
bracis-19036	158	30	two	two	NUM
bracis-19036	158	31	best	good	ADJ
bracis-19036	158	32	cgp	cgp	NOUN
bracis-19036	158	33	approaches	approach	NOUN
bracis-19036	158	34	are	be	AUX
bracis-19036	158	35	compared	compare	VERB
bracis-19036	158	36	to	to	ADP
bracis-19036	158	37	those	those	PRON
bracis-19036	158	38	found	find	VERB
bracis-19036	158	39	by	by	ADP
bracis-19036	158	40	genie3	genie3	NOUN
bracis-19036	158	41	.	.	PUNCT
bracis-19036	159	1	the	the	DET
bracis-19036	159	2	problems	problem	NOUN
bracis-19036	159	3	considered	consider	VERB
bracis-19036	159	4	in	in	ADP
bracis-19036	159	5	our	our	PRON
bracis-19036	159	6	analysis	analysis	NOUN
bracis-19036	159	7	are	be	AUX
bracis-19036	159	8	presented	present	VERB
bracis-19036	159	9	in	in	ADP
bracis-19036	159	10	table	table	NOUN
bracis-19036	159	11	 	 	SPACE
bracis-19036	159	12	1	1	NUM
bracis-19036	159	13	,	,	PUNCT
bracis-19036	159	14	with	with	ADP
bracis-19036	159	15	information	information	NOUN
bracis-19036	159	16	of	of	ADP
bracis-19036	159	17	the	the	DET
bracis-19036	159	18	number	number	NOUN
bracis-19036	159	19	of	of	ADP
bracis-19036	159	20	genes	gene	NOUN
bracis-19036	159	21	(	(	PUNCT
bracis-19036	159	22	#	#	NOUN
bracis-19036	159	23	genes	gene	NOUN
bracis-19036	159	24	)	)	PUNCT
bracis-19036	159	25	and	and	CCONJ
bracis-19036	159	26	the	the	DET
bracis-19036	159	27	number	number	NOUN
bracis-19036	159	28	of	of	ADP
bracis-19036	159	29	pseudotimes	pseudotime	NOUN
bracis-19036	159	30	(	(	PUNCT
bracis-19036	159	31	#	#	SYM
bracis-19036	159	32	pseudotimes	pseudotime	NOUN
bracis-19036	159	33	)	)	PUNCT
bracis-19036	159	34	.	.	PUNCT
bracis-19036	160	1	these	these	DET
bracis-19036	160	2	problems	problem	NOUN
bracis-19036	160	3	are	be	AUX
bracis-19036	160	4	curated	curate	VERB
bracis-19036	160	5	models	model	NOUN
bracis-19036	160	6	with	with	ADP
bracis-19036	160	7	2,000	2,000	NUM
bracis-19036	160	8	cells	cell	NOUN
bracis-19036	160	9	and	and	CCONJ
bracis-19036	160	10	are	be	AUX
bracis-19036	160	11	presented	present	VERB
bracis-19036	160	12	in	in	ADP
bracis-19036	160	13	three	three	NUM
bracis-19036	160	14	different	different	ADJ
bracis-19036	160	15	configurations	configuration	NOUN
bracis-19036	160	16	considering	consider	VERB
bracis-19036	160	17	0	0	NUM
bracis-19036	160	18	%	%	NOUN
bracis-19036	160	19	,	,	PUNCT
bracis-19036	160	20	50	50	NUM
bracis-19036	160	21	%	%	NOUN
bracis-19036	160	22	,	,	PUNCT
bracis-19036	160	23	and	and	CCONJ
bracis-19036	160	24	70	70	NUM
bracis-19036	160	25	%	%	NOUN
bracis-19036	160	26	dropout	dropout	NOUN
bracis-19036	160	27	.	.	PUNCT
bracis-19036	161	1	in	in	ADP
bracis-19036	161	2	order	order	NOUN
bracis-19036	161	3	to	to	PART
bracis-19036	161	4	remove	remove	VERB
bracis-19036	161	5	or	or	CCONJ
bracis-19036	161	6	soften	soften	VERB
bracis-19036	161	7	the	the	DET
bracis-19036	161	8	effects	effect	NOUN
bracis-19036	161	9	of	of	ADP
bracis-19036	161	10	technical	technical	ADJ
bracis-19036	161	11	and	and	CCONJ
bracis-19036	161	12	biological	biological	ADJ
bracis-19036	161	13	variations	variation	NOUN
bracis-19036	161	14	as	as	ADV
bracis-19036	161	15	well	well	ADV
bracis-19036	161	16	as	as	ADP
bracis-19036	161	17	obtain	obtain	VERB
bracis-19036	161	18	a	a	DET
bracis-19036	161	19	single	single	ADJ
bracis-19036	161	20	curve	curve	NOUN
bracis-19036	161	21	that	that	PRON
bracis-19036	161	22	represents	represent	VERB
bracis-19036	161	23	gene	gene	NOUN
bracis-19036	161	24	expression	expression	NOUN
bracis-19036	161	25	over	over	ADP
bracis-19036	161	26	time	time	NOUN
bracis-19036	161	27	,	,	PUNCT
bracis-19036	161	28	we	we	PRON
bracis-19036	161	29	use	use	VERB
bracis-19036	161	30	data	datum	NOUN
bracis-19036	161	31	approximation	approximation	NOUN
bracis-19036	161	32	via	via	ADP
bracis-19036	161	33	cubic	cubic	ADJ
bracis-19036	161	34	smoothing	smoothing	NOUN
bracis-19036	161	35	splines	spline	NOUN
bracis-19036	161	36	implemented	implement	VERB
bracis-19036	161	37	in	in	ADP
bracis-19036	161	38	python	python	NOUN
bracis-19036	161	39	and	and	CCONJ
bracis-19036	161	40	distributed	distribute	VERB
bracis-19036	161	41	through	through	ADP
bracis-19036	161	42	the	the	DET
bracis-19036	161	43	library	library	NOUN
bracis-19036	161	44	csapsfootnote	csapsfootnote	VERB
bracis-19036	161	45	1	1	NUM
bracis-19036	161	46	.	.	PUNCT
bracis-19036	162	1	then	then	ADV
bracis-19036	162	2	,	,	PUNCT
bracis-19036	162	3	the	the	DET
bracis-19036	162	4	data	data	NOUN
bracis-19036	162	5	is	be	AUX
bracis-19036	162	6	binarized	binarize	VERB
bracis-19036	162	7	with	with	ADP
bracis-19036	162	8	bikmeans	bikmean	NOUN
bracis-19036	162	9	through	through	ADP
bracis-19036	162	10	gene	gene	NOUN
bracis-19036	162	11	expression	expression	NOUN
bracis-19036	162	12	data	datum	NOUN
bracis-19036	162	13	pre	pre	ADJ
bracis-19036	162	14	-	-	ADJ
bracis-19036	162	15	processing	processing	ADJ
bracis-19036	162	16	tool	tool	NOUN
bracis-19036	162	17	(	(	PUNCT
bracis-19036	162	18	gedprotools)footnote	gedprotools)footnote	PROPN
bracis-19036	162	19	2	2	X
bracis-19036	162	20	.	.	PUNCT
bracis-19036	163	1	all	all	DET
bracis-19036	163	2	methods	method	NOUN
bracis-19036	163	3	were	be	AUX
bracis-19036	163	4	implemented	implement	VERB
bracis-19036	163	5	in	in	ADP
bracis-19036	163	6	c++	c++	NOUN
bracis-19036	163	7	and	and	CCONJ
bracis-19036	163	8	the	the	DET
bracis-19036	163	9	source	source	NOUN
bracis-19036	163	10	codes	code	NOUN
bracis-19036	163	11	are	be	AUX
bracis-19036	163	12	availablefootnote	availablefootnote	ADP
bracis-19036	163	13	3	3	NUM
bracis-19036	163	14	.	.	PUNCT
bracis-19036	164	1	the	the	DET
bracis-19036	164	2	experiments	experiment	NOUN
bracis-19036	164	3	were	be	AUX
bracis-19036	164	4	run	run	VERB
bracis-19036	164	5	in	in	ADP
bracis-19036	164	6	a	a	DET
bracis-19036	164	7	ubuntu	ubuntu	ADJ
bracis-19036	164	8	server	server	NOUN
bracis-19036	164	9	20.04	20.04	NUM
bracis-19036	164	10	lts	lts	PROPN
bracis-19036	164	11	(	(	PUNCT
bracis-19036	164	12	hvm	hvm	PROPN
bracis-19036	164	13	)	)	PUNCT
bracis-19036	164	14	with	with	ADP
bracis-19036	164	15	16	16	NUM
bracis-19036	164	16	vcpus	vcpus	PROPN
bracis-19036	164	17	intel(r	intel(r	PROPN
bracis-19036	164	18	)	)	PUNCT
bracis-19036	164	19	xeon(r	xeon(r	PROPN
bracis-19036	164	20	)	)	PUNCT
bracis-19036	164	21	cpu	cpu	NOUN
bracis-19036	164	22	e5	e5	PROPN
bracis-19036	164	23	-	-	PUNCT
bracis-19036	164	24	2666	2666	NUM
bracis-19036	164	25	v3	v3	PROPN
bracis-19036	164	26	@	@	ADP
bracis-19036	164	27	2.90ghz	2.90ghz	NUM
bracis-19036	164	28	and	and	CCONJ
bracis-19036	164	29	30	30	NUM
bracis-19036	164	30	gb	gb	NOUN
bracis-19036	164	31	ram	ram	NOUN
bracis-19036	164	32	and	and	CCONJ
bracis-19036	164	33	the	the	DET
bracis-19036	164	34	results	result	NOUN
bracis-19036	164	35	are	be	AUX
bracis-19036	164	36	evaluated	evaluate	VERB
bracis-19036	164	37	using	use	VERB
bracis-19036	164	38	the	the	DET
bracis-19036	164	39	pipeline	pipeline	NOUN
bracis-19036	164	40	presented	present	VERB
bracis-19036	164	41	in	in	ADP
bracis-19036	164	42	 	 	SPACE
bracis-19036	164	43	[	[	X
bracis-19036	164	44	20	20	NUM
bracis-19036	164	45	]	]	PUNCT
bracis-19036	164	46	which	which	PRON
bracis-19036	164	47	considers	consider	VERB
bracis-19036	164	48	the	the	DET
bracis-19036	164	49	auprc	auprc	ADJ
bracis-19036	164	50	and	and	CCONJ
bracis-19036	164	51	auroc	auroc	NOUN
bracis-19036	164	52	values	value	NOUN
bracis-19036	164	53	for	for	ADP
bracis-19036	164	54	comparison	comparison	NOUN
bracis-19036	164	55	.	.	PUNCT
bracis-19036	165	1	table	table	NOUN
bracis-19036	165	2	1	1	NUM
bracis-19036	165	3	.	.	PUNCT
bracis-19036	166	1	problems	problem	NOUN
bracis-19036	166	2	used	use	VERB
bracis-19036	166	3	in	in	ADP
bracis-19036	166	4	the	the	DET
bracis-19036	166	5	experiments.full	experiments.full	NUM
bracis-19036	166	6	size	size	NOUN
bracis-19036	166	7	table	table	NOUN
bracis-19036	166	8	5.1	5.1	NUM
bracis-19036	166	9	comparative	comparative	ADJ
bracis-19036	166	10	analysis	analysis	NOUN
bracis-19036	166	11	of	of	ADP
bracis-19036	166	12	 	 	SPACE
bracis-19036	166	13	the	the	DET
bracis-19036	166	14	 	 	SPACE
bracis-19036	166	15	cgp	cgp	NOUN
bracis-19036	166	16	techniques	technique	NOUN
bracis-19036	166	17	we	we	PRON
bracis-19036	166	18	compare	compare	VERB
bracis-19036	166	19	the	the	DET
bracis-19036	166	20	standard	standard	ADJ
bracis-19036	166	21	cgp	cgp	PROPN
bracis-19036	166	22	with	with	ADP
bracis-19036	166	23	sam	sam	PROPN
bracis-19036	166	24	and	and	CCONJ
bracis-19036	166	25	the	the	DET
bracis-19036	166	26	cgp	cgp	NOUN
bracis-19036	166	27	with	with	ADP
bracis-19036	166	28	somo	somo	NOUN
bracis-19036	166	29	in	in	ADP
bracis-19036	166	30	different	different	ADJ
bracis-19036	166	31	approaches	approach	NOUN
bracis-19036	166	32	:	:	PUNCT
bracis-19036	166	33	(	(	PUNCT
bracis-19036	166	34	i	i	NOUN
bracis-19036	166	35	)	)	PUNCT
bracis-19036	166	36	cgp	cgp	PROPN
bracis-19036	166	37	:	:	PUNCT
bracis-19036	166	38	standard	standard	PROPN
bracis-19036	166	39	cgp	cgp	PROPN
bracis-19036	166	40	using	use	VERB
bracis-19036	166	41	sam	sam	PROPN
bracis-19036	166	42	for	for	ADP
bracis-19036	166	43	obtaining	obtain	VERB
bracis-19036	166	44	the	the	DET
bracis-19036	166	45	first	first	ADJ
bracis-19036	166	46	feasible	feasible	ADJ
bracis-19036	166	47	solution	solution	NOUN
bracis-19036	166	48	and	and	CCONJ
bracis-19036	166	49	for	for	ADP
bracis-19036	166	50	optimizing	optimizing	NOUN
bracis-19036	166	51	;	;	PUNCT
bracis-19036	166	52	(	(	PUNCT
bracis-19036	166	53	ii	ii	NOUN
bracis-19036	166	54	)	)	PUNCT
bracis-19036	166	55	somo	somo	PROPN
bracis-19036	166	56	:	:	PUNCT
bracis-19036	166	57	cgp	cgp	PROPN
bracis-19036	166	58	using	use	VERB
bracis-19036	166	59	somo	somo	NOUN
bracis-19036	166	60	without	without	ADP
bracis-19036	166	61	optimization	optimization	NOUN
bracis-19036	166	62	step	step	NOUN
bracis-19036	166	63	;	;	PUNCT
bracis-19036	166	64	(	(	PUNCT
bracis-19036	166	65	iii	iii	X
bracis-19036	166	66	)	)	PUNCT
bracis-19036	166	67	somo	somo	PROPN
bracis-19036	166	68	-	-	PUNCT
bracis-19036	166	69	sam	sam	PROPN
bracis-19036	166	70	:	:	PUNCT
bracis-19036	166	71	cgp	cgp	PROPN
bracis-19036	166	72	using	use	VERB
bracis-19036	166	73	somo	somo	NOUN
bracis-19036	166	74	with	with	ADP
bracis-19036	166	75	optimization	optimization	NOUN
bracis-19036	166	76	step	step	NOUN
bracis-19036	166	77	;	;	PUNCT
bracis-19036	166	78	(	(	PUNCT
bracis-19036	166	79	iv	iv	X
bracis-19036	166	80	)	)	PUNCT
bracis-19036	166	81	somo	somo	PROPN
bracis-19036	166	82	-	-	PUNCT
bracis-19036	166	83	sam	sam	NOUN
bracis-19036	166	84	-	-	PUNCT
bracis-19036	166	85	r	r	NOUN
bracis-19036	166	86	:	:	PUNCT
bracis-19036	166	87	cgp	cgp	PROPN
bracis-19036	166	88	using	use	VERB
bracis-19036	166	89	somo	somo	NOUN
bracis-19036	166	90	with	with	ADP
bracis-19036	166	91	optimization	optimization	NOUN
bracis-19036	166	92	step	step	NOUN
bracis-19036	166	93	and	and	CCONJ
bracis-19036	166	94	evolutionary	evolutionary	ADJ
bracis-19036	166	95	search	search	NOUN
bracis-19036	166	96	restart	restart	NOUN
bracis-19036	166	97	;	;	PUNCT
bracis-19036	166	98	(	(	PUNCT
bracis-19036	166	99	v	v	NOUN
bracis-19036	166	100	)	)	PUNCT
bracis-19036	166	101	somo	somo	PROPN
bracis-19036	166	102	-	-	PUNCT
bracis-19036	166	103	sam	sam	NOUN
bracis-19036	166	104	-	-	PUNCT
bracis-19036	166	105	pq50	pq50	PROPN
bracis-19036	166	106	:	:	PUNCT
bracis-19036	166	107	cgp	cgp	PROPN
bracis-19036	166	108	using	use	VERB
bracis-19036	166	109	somo	somo	NOUN
bracis-19036	166	110	with	with	ADP
bracis-19036	166	111	optimization	optimization	NOUN
bracis-19036	166	112	step	step	NOUN
bracis-19036	166	113	and	and	CCONJ
bracis-19036	166	114	\(p_q\	\(p_q\	ADJ
bracis-19036	166	115	)	)	PUNCT
bracis-19036	166	116	=	=	SYM
bracis-19036	167	1	50	50	NUM
bracis-19036	167	2	%	%	NOUN
bracis-19036	167	3	.	.	PUNCT
bracis-19036	168	1	the	the	DET
bracis-19036	168	2	suffix	suffix	PROPN
bracis-19036	168	3	r	r	NOUN
bracis-19036	168	4	means	mean	VERB
bracis-19036	168	5	that	that	SCONJ
bracis-19036	168	6	the	the	DET
bracis-19036	168	7	evolutionary	evolutionary	ADJ
bracis-19036	168	8	process	process	NOUN
bracis-19036	168	9	is	be	AUX
bracis-19036	168	10	restarted	restart	VERB
bracis-19036	168	11	with	with	ADP
bracis-19036	168	12	a	a	DET
bracis-19036	168	13	different	different	ADJ
bracis-19036	168	14	initial	initial	ADJ
bracis-19036	168	15	population	population	NOUN
bracis-19036	168	16	every	every	DET
bracis-19036	168	17	1,000	1,000	NUM
bracis-19036	168	18	evaluations	evaluation	NOUN
bracis-19036	168	19	.	.	PUNCT
bracis-19036	169	1	here	here	ADV
bracis-19036	169	2	,	,	PUNCT
bracis-19036	169	3	we	we	PRON
bracis-19036	169	4	aim	aim	VERB
bracis-19036	169	5	to	to	PART
bracis-19036	169	6	evaluate	evaluate	VERB
bracis-19036	169	7	the	the	DET
bracis-19036	169	8	performance	performance	NOUN
bracis-19036	169	9	of	of	ADP
bracis-19036	169	10	somo	somo	NOUN
bracis-19036	169	11	with	with	ADP
bracis-19036	169	12	an	an	DET
bracis-19036	169	13	appropriate	appropriate	ADJ
bracis-19036	169	14	optimization	optimization	NOUN
bracis-19036	169	15	step	step	NOUN
bracis-19036	169	16	.	.	PUNCT
bracis-19036	170	1	somo	somo	PROPN
bracis-19036	170	2	is	be	AUX
bracis-19036	170	3	able	able	ADJ
bracis-19036	170	4	to	to	PART
bracis-19036	170	5	obtain	obtain	VERB
bracis-19036	170	6	feasible	feasible	ADJ
bracis-19036	170	7	solutions	solution	NOUN
bracis-19036	170	8	in	in	ADP
bracis-19036	170	9	a	a	DET
bracis-19036	170	10	faster	fast	ADJ
bracis-19036	170	11	way	way	NOUN
bracis-19036	170	12	than	than	ADP
bracis-19036	170	13	other	other	ADJ
bracis-19036	170	14	approaches	approach	NOUN
bracis-19036	170	15	but	but	CCONJ
bracis-19036	170	16	this	this	DET
bracis-19036	170	17	solution	solution	NOUN
bracis-19036	170	18	usually	usually	ADV
bracis-19036	170	19	has	have	VERB
bracis-19036	170	20	many	many	ADJ
bracis-19036	170	21	logic	logic	ADJ
bracis-19036	170	22	elements	element	NOUN
bracis-19036	170	23	.	.	PUNCT
bracis-19036	171	1	table	table	NOUN
bracis-19036	171	2	2	2	NUM
bracis-19036	171	3	.	.	PUNCT
bracis-19036	171	4	auprc	auprc	ADJ
bracis-19036	171	5	results	result	NOUN
bracis-19036	171	6	for	for	ADP
bracis-19036	171	7	all	all	DET
bracis-19036	171	8	problems	problem	NOUN
bracis-19036	171	9	.	.	PUNCT
bracis-19036	172	1	the	the	DET
bracis-19036	172	2	suffix	suffix	NOUN
bracis-19036	172	3	after	after	ADP
bracis-19036	172	4	the	the	DET
bracis-19036	172	5	problem	problem	NOUN
bracis-19036	172	6	’s	’s	PART
bracis-19036	172	7	name	name	NOUN
bracis-19036	172	8	is	be	AUX
bracis-19036	172	9	the	the	DET
bracis-19036	172	10	dropout	dropout	NOUN
bracis-19036	172	11	rate.full	rate.full	NOUN
bracis-19036	172	12	size	size	NOUN
bracis-19036	172	13	table	table	NOUN
bracis-19036	172	14	table	table	NOUN
bracis-19036	172	15	3	3	NUM
bracis-19036	172	16	.	.	PUNCT
bracis-19036	172	17	auroc	auroc	NOUN
bracis-19036	172	18	results	result	NOUN
bracis-19036	172	19	for	for	ADP
bracis-19036	172	20	all	all	DET
bracis-19036	172	21	problems	problem	NOUN
bracis-19036	172	22	.	.	PUNCT
bracis-19036	173	1	the	the	DET
bracis-19036	173	2	suffix	suffix	NOUN
bracis-19036	173	3	after	after	ADP
bracis-19036	173	4	the	the	DET
bracis-19036	173	5	problem	problem	NOUN
bracis-19036	173	6	’s	’s	PART
bracis-19036	173	7	name	name	NOUN
bracis-19036	173	8	is	be	AUX
bracis-19036	173	9	the	the	DET
bracis-19036	173	10	dropout	dropout	NOUN
bracis-19036	173	11	rate	rate	NOUN
bracis-19036	173	12	.	.	PUNCT
bracis-19036	174	1	algorithms	algorithm	NOUN
bracis-19036	174	2	marked	mark	VERB
bracis-19036	174	3	with	with	ADP
bracis-19036	174	4	an	an	DET
bracis-19036	174	5	asterisk	asterisk	NOUN
bracis-19036	174	6	have	have	VERB
bracis-19036	174	7	statistical	statistical	ADJ
bracis-19036	174	8	difference.full	difference.full	ADJ
bracis-19036	174	9	size	size	NOUN
bracis-19036	174	10	table	table	NOUN
bracis-19036	174	11	table	table	NOUN
bracis-19036	174	12	4	4	NUM
bracis-19036	174	13	.	.	PUNCT
bracis-19036	175	1	algorithm	algorithm	NOUN
bracis-19036	175	2	counting	counting	NOUN
bracis-19036	175	3	considering	consider	VERB
bracis-19036	175	4	the	the	DET
bracis-19036	175	5	best	good	ADJ
bracis-19036	175	6	values	value	NOUN
bracis-19036	175	7	of	of	ADP
bracis-19036	175	8	median	median	PROPN
bracis-19036	175	9	.	.	PUNCT
bracis-19036	176	1	values	value	NOUN
bracis-19036	176	2	between	between	ADP
bracis-19036	176	3	parenthesis	parenthesis	NOUN
bracis-19036	176	4	is	be	AUX
bracis-19036	176	5	the	the	DET
bracis-19036	176	6	algorithm	algorithm	NOUN
bracis-19036	176	7	counting	counting	NOUN
bracis-19036	176	8	considering	consider	VERB
bracis-19036	176	9	the	the	DET
bracis-19036	176	10	statistical	statistical	ADJ
bracis-19036	176	11	equality.full	equality.full	ADJ
bracis-19036	176	12	size	size	NOUN
bracis-19036	176	13	table	table	NOUN
bracis-19036	176	14	for	for	ADP
bracis-19036	176	15	the	the	DET
bracis-19036	176	16	standard	standard	PROPN
bracis-19036	176	17	cgp	cgp	PROPN
bracis-19036	176	18	,	,	PUNCT
bracis-19036	176	19	we	we	PRON
bracis-19036	176	20	use	use	VERB
bracis-19036	176	21	\(\lambda	\(\lambda	NOUN
bracis-19036	176	22	\	\	NOUN
bracis-19036	176	23	)	)	PUNCT
bracis-19036	176	24	=	=	SYM
bracis-19036	176	25	4	4	NUM
bracis-19036	176	26	and	and	CCONJ
bracis-19036	176	27	random	random	ADJ
bracis-19036	176	28	population	population	NOUN
bracis-19036	176	29	initialization	initialization	NOUN
bracis-19036	176	30	.	.	PUNCT
bracis-19036	177	1	when	when	SCONJ
bracis-19036	177	2	considering	consider	VERB
bracis-19036	177	3	somo	somo	NOUN
bracis-19036	177	4	,	,	PUNCT
bracis-19036	177	5	we	we	PRON
bracis-19036	177	6	use	use	VERB
bracis-19036	177	7	\(\lambda	\(\lambda	NOUN
bracis-19036	177	8	\	\	NOUN
bracis-19036	177	9	)	)	PUNCT
bracis-19036	177	10	=	=	SYM
bracis-19036	177	11	2	2	NUM
bracis-19036	177	12	,	,	PUNCT
bracis-19036	177	13	\(p_{f	\(p_{f	NOUN
bracis-19036	177	14	}	}	PUNCT
bracis-19036	177	15	=	=	SYM
bracis-19036	177	16	0\	0\	PROPN
bracis-19036	177	17	)	)	PUNCT
bracis-19036	177	18	and	and	CCONJ
bracis-19036	177	19	the	the	DET
bracis-19036	177	20	population	population	NOUN
bracis-19036	177	21	initialization	initialization	NOUN
bracis-19036	177	22	suggested	suggest	VERB
bracis-19036	177	23	in	in	ADP
bracis-19036	177	24	 	 	SPACE
bracis-19036	177	25	[	[	X
bracis-19036	177	26	11	11	NUM
bracis-19036	177	27	]	]	PUNCT
bracis-19036	177	28	.	.	PUNCT
bracis-19036	178	1	also	also	ADV
bracis-19036	178	2	,	,	PUNCT
bracis-19036	178	3	in	in	ADP
bracis-19036	178	4	 	 	SPACE
bracis-19036	178	5	[	[	X
bracis-19036	178	6	11	11	NUM
bracis-19036	178	7	]	]	PUNCT
bracis-19036	178	8	the	the	DET
bracis-19036	178	9	value	value	NOUN
bracis-19036	178	10	of	of	ADP
bracis-19036	178	11	\(n_c\	\(n_c\	NOUN
bracis-19036	178	12	)	)	PUNCT
bracis-19036	178	13	is	be	AUX
bracis-19036	178	14	variable	variable	ADJ
bracis-19036	178	15	,	,	PUNCT
bracis-19036	178	16	considering	consider	VERB
bracis-19036	178	17	a	a	DET
bracis-19036	178	18	multiple	multiple	NOUN
bracis-19036	178	19	of	of	ADP
bracis-19036	178	20	the	the	DET
bracis-19036	178	21	number	number	NOUN
bracis-19036	178	22	of	of	ADP
bracis-19036	178	23	standard	standard	ADJ
bracis-19036	178	24	gates	gate	NOUN
bracis-19036	178	25	required	require	VERB
bracis-19036	178	26	to	to	PART
bracis-19036	178	27	implement	implement	VERB
bracis-19036	178	28	each	each	DET
bracis-19036	178	29	circuit	circuit	NOUN
bracis-19036	178	30	.	.	PUNCT
bracis-19036	179	1	however	however	ADV
bracis-19036	179	2	,	,	PUNCT
bracis-19036	179	3	the	the	DET
bracis-19036	179	4	definition	definition	NOUN
bracis-19036	179	5	of	of	ADP
bracis-19036	179	6	the	the	DET
bracis-19036	179	7	number	number	NOUN
bracis-19036	179	8	of	of	ADP
bracis-19036	179	9	gates	gate	NOUN
bracis-19036	179	10	to	to	PART
bracis-19036	179	11	implement	implement	VERB
bracis-19036	179	12	a	a	DET
bracis-19036	179	13	circuit	circuit	NOUN
bracis-19036	179	14	can	can	AUX
bracis-19036	179	15	not	not	PART
bracis-19036	179	16	be	be	AUX
bracis-19036	179	17	easily	easily	ADV
bracis-19036	179	18	defined	define	VERB
bracis-19036	179	19	a	a	DET
bracis-19036	179	20	priori	priori	NOUN
bracis-19036	179	21	and	and	CCONJ
bracis-19036	179	22	,	,	PUNCT
bracis-19036	179	23	hence	hence	ADV
bracis-19036	179	24	,	,	PUNCT
bracis-19036	179	25	we	we	PRON
bracis-19036	179	26	fixed	fix	VERB
bracis-19036	179	27	\(n_c\	\(n_c\	NOUN
bracis-19036	179	28	)	)	PUNCT
bracis-19036	179	29	as	as	ADV
bracis-19036	179	30	usually	usually	ADV
bracis-19036	179	31	considered	consider	VERB
bracis-19036	179	32	when	when	SCONJ
bracis-19036	179	33	using	use	VERB
bracis-19036	179	34	the	the	DET
bracis-19036	179	35	standard	standard	ADJ
bracis-19036	179	36	cgp	cgp	NOUN
bracis-19036	179	37	and	and	CCONJ
bracis-19036	179	38	used	use	VERB
bracis-19036	179	39	only	only	ADV
bracis-19036	179	40	\(n_c	\(n_c	NOUN
bracis-19036	179	41	=	=	SYM
bracis-19036	179	42	100\	100\	NUM
bracis-19036	179	43	)	)	PUNCT
bracis-19036	179	44	.	.	PUNCT
bracis-19036	180	1	the	the	DET
bracis-19036	180	2	other	other	ADJ
bracis-19036	180	3	parameters	parameter	NOUN
bracis-19036	180	4	are	be	AUX
bracis-19036	180	5	\(n_r	\(n_r	ADJ
bracis-19036	180	6	=	=	SYM
bracis-19036	180	7	1\	1\	NUM
bracis-19036	180	8	)	)	PUNCT
bracis-19036	180	9	and	and	CCONJ
bracis-19036	180	10	\(lb	\(lb	NOUN
bracis-19036	180	11	=	=	NOUN
bracis-19036	180	12	n_c\	n_c\	NOUN
bracis-19036	180	13	)	)	PUNCT
bracis-19036	180	14	.	.	PUNCT
bracis-19036	181	1	for	for	ADP
bracis-19036	181	2	each	each	DET
bracis-19036	181	3	problem	problem	NOUN
bracis-19036	181	4	,	,	PUNCT
bracis-19036	181	5	5	5	NUM
bracis-19036	181	6	independent	independent	ADJ
bracis-19036	181	7	runs	run	NOUN
bracis-19036	181	8	were	be	AUX
bracis-19036	181	9	performed	perform	VERB
bracis-19036	181	10	with	with	ADP
bracis-19036	181	11	a	a	DET
bracis-19036	181	12	maximum	maximum	NOUN
bracis-19036	181	13	of	of	ADP
bracis-19036	181	14	100,000	100,000	NUM
bracis-19036	181	15	objective	objective	ADJ
bracis-19036	181	16	function	function	NOUN
bracis-19036	181	17	evaluations	evaluation	NOUN
bracis-19036	181	18	.	.	PUNCT
bracis-19036	182	1	for	for	ADP
bracis-19036	182	2	somo	somo	PROPN
bracis-19036	182	3	-	-	PUNCT
bracis-19036	182	4	sam	sam	NOUN
bracis-19036	182	5	-	-	PUNCT
bracis-19036	182	6	r	r	NOUN
bracis-19036	182	7	,	,	PUNCT
bracis-19036	182	8	the	the	DET
bracis-19036	182	9	number	number	NOUN
bracis-19036	182	10	of	of	ADP
bracis-19036	182	11	evaluations	evaluation	NOUN
bracis-19036	182	12	to	to	PART
bracis-19036	182	13	restart	restart	VERB
bracis-19036	182	14	is	be	AUX
bracis-19036	182	15	1,000	1,000	NUM
bracis-19036	182	16	and	and	CCONJ
bracis-19036	182	17	was	be	AUX
bracis-19036	182	18	defined	define	VERB
bracis-19036	182	19	during	during	ADP
bracis-19036	182	20	preliminary	preliminary	ADJ
bracis-19036	182	21	experiments	experiment	NOUN
bracis-19036	182	22	,	,	PUNCT
bracis-19036	182	23	analyzing	analyze	VERB
bracis-19036	182	24	the	the	DET
bracis-19036	182	25	average	average	ADJ
bracis-19036	182	26	number	number	NOUN
bracis-19036	182	27	of	of	ADP
bracis-19036	182	28	evaluations	evaluation	NOUN
bracis-19036	182	29	needed	need	VERB
bracis-19036	182	30	to	to	PART
bracis-19036	182	31	find	find	VERB
bracis-19036	182	32	a	a	DET
bracis-19036	182	33	feasible	feasible	ADJ
bracis-19036	182	34	solution	solution	NOUN
bracis-19036	182	35	.	.	PUNCT
bracis-19036	183	1	also	also	ADV
bracis-19036	183	2	,	,	PUNCT
bracis-19036	183	3	the	the	DET
bracis-19036	183	4	accumulated	accumulate	VERB
bracis-19036	183	5	number	number	NOUN
bracis-19036	183	6	of	of	ADP
bracis-19036	183	7	evaluations	evaluation	NOUN
bracis-19036	183	8	is	be	AUX
bracis-19036	183	9	used	use	VERB
bracis-19036	183	10	in	in	ADP
bracis-19036	183	11	the	the	DET
bracis-19036	183	12	stop	stop	NOUN
bracis-19036	183	13	criteria	criterion	NOUN
bracis-19036	183	14	.	.	PUNCT
bracis-19036	184	1	tables	table	NOUN
bracis-19036	184	2	 	 	SPACE
bracis-19036	184	3	2	2	NUM
bracis-19036	184	4	and	and	CCONJ
bracis-19036	184	5	 	 	SPACE
bracis-19036	184	6	3	3	NUM
bracis-19036	184	7	present	present	VERB
bracis-19036	184	8	the	the	DET
bracis-19036	184	9	results	result	NOUN
bracis-19036	184	10	of	of	ADP
bracis-19036	184	11	the	the	DET
bracis-19036	184	12	cgp	cgp	PROPN
bracis-19036	184	13	methods	method	NOUN
bracis-19036	184	14	,	,	PUNCT
bracis-19036	184	15	respectively	respectively	ADV
bracis-19036	184	16	,	,	PUNCT
bracis-19036	184	17	for	for	ADP
bracis-19036	184	18	auprc	auprc	ADJ
bracis-19036	184	19	and	and	CCONJ
bracis-19036	184	20	auroc	auroc	NOUN
bracis-19036	184	21	.	.	PUNCT
bracis-19036	185	1	the	the	DET
bracis-19036	185	2	best	good	ADJ
bracis-19036	185	3	(	(	PUNCT
bracis-19036	185	4	maximum	maximum	ADJ
bracis-19036	185	5	)	)	PUNCT
bracis-19036	185	6	,	,	PUNCT
bracis-19036	185	7	first	first	ADJ
bracis-19036	185	8	quantile	quantile	NOUN
bracis-19036	185	9	(	(	PUNCT
bracis-19036	185	10	q1	q1	PROPN
bracis-19036	185	11	)	)	PUNCT
bracis-19036	185	12	,	,	PUNCT
bracis-19036	185	13	median	median	NOUN
bracis-19036	185	14	,	,	PUNCT
bracis-19036	185	15	mean	mean	ADJ
bracis-19036	185	16	,	,	PUNCT
bracis-19036	185	17	third	third	ADJ
bracis-19036	185	18	quantile	quantile	NOUN
bracis-19036	185	19	(	(	PUNCT
bracis-19036	185	20	q3	q3	PROPN
bracis-19036	185	21	)	)	PUNCT
bracis-19036	185	22	,	,	PUNCT
bracis-19036	185	23	and	and	CCONJ
bracis-19036	185	24	standard	standard	ADJ
bracis-19036	185	25	deviation	deviation	NOUN
bracis-19036	185	26	values	value	NOUN
bracis-19036	185	27	of	of	ADP
bracis-19036	185	28	the	the	DET
bracis-19036	185	29	results	result	NOUN
bracis-19036	185	30	are	be	AUX
bracis-19036	185	31	shown	show	VERB
bracis-19036	185	32	,	,	PUNCT
bracis-19036	185	33	and	and	CCONJ
bracis-19036	185	34	the	the	DET
bracis-19036	185	35	best	good	ADJ
bracis-19036	185	36	values	value	NOUN
bracis-19036	185	37	are	be	AUX
bracis-19036	185	38	highlighted	highlight	VERB
bracis-19036	185	39	in	in	ADP
bracis-19036	185	40	boldface	boldface	NOUN
bracis-19036	185	41	.	.	PUNCT
bracis-19036	186	1	also	also	ADV
bracis-19036	186	2	,	,	PUNCT
bracis-19036	186	3	the	the	DET
bracis-19036	186	4	methods	method	NOUN
bracis-19036	186	5	with	with	ADP
bracis-19036	186	6	an	an	DET
bracis-19036	186	7	asterisk	asterisk	NOUN
bracis-19036	186	8	have	have	VERB
bracis-19036	186	9	statistical	statistical	ADJ
bracis-19036	186	10	difference	difference	NOUN
bracis-19036	186	11	,	,	PUNCT
bracis-19036	186	12	when	when	SCONJ
bracis-19036	186	13	considering	consider	VERB
bracis-19036	186	14	dunn	dunn	PROPN
bracis-19036	186	15	’s	’s	PART
bracis-19036	186	16	test	test	NOUN
bracis-19036	186	17	for	for	ADP
bracis-19036	186	18	95	95	NUM
bracis-19036	186	19	%	%	NOUN
bracis-19036	186	20	of	of	ADP
bracis-19036	186	21	confidence	confidence	NOUN
bracis-19036	186	22	.	.	PUNCT
bracis-19036	187	1	based	base	VERB
bracis-19036	187	2	on	on	ADP
bracis-19036	187	3	these	these	DET
bracis-19036	187	4	results	result	NOUN
bracis-19036	187	5	,	,	PUNCT
bracis-19036	187	6	one	one	PRON
bracis-19036	187	7	can	can	AUX
bracis-19036	187	8	see	see	VERB
bracis-19036	187	9	that	that	SCONJ
bracis-19036	187	10	the	the	DET
bracis-19036	187	11	results	result	NOUN
bracis-19036	187	12	of	of	ADP
bracis-19036	187	13	somo	somo	NOUN
bracis-19036	187	14	-	-	PUNCT
bracis-19036	187	15	sam	sam	PROPN
bracis-19036	187	16	and	and	CCONJ
bracis-19036	187	17	somo	somo	PROPN
bracis-19036	187	18	-	-	PUNCT
bracis-19036	187	19	sam	sam	NOUN
bracis-19036	187	20	-	-	PUNCT
bracis-19036	187	21	r	r	NOUN
bracis-19036	187	22	are	be	AUX
bracis-19036	187	23	equal	equal	ADJ
bracis-19036	187	24	in	in	ADP
bracis-19036	187	25	some	some	DET
bracis-19036	187	26	cases	case	NOUN
bracis-19036	187	27	.	.	PUNCT
bracis-19036	188	1	this	this	PRON
bracis-19036	188	2	is	be	AUX
bracis-19036	188	3	expected	expect	VERB
bracis-19036	188	4	as	as	SCONJ
bracis-19036	188	5	the	the	DET
bracis-19036	188	6	first	first	ADJ
bracis-19036	188	7	feasible	feasible	ADJ
bracis-19036	188	8	solution	solution	NOUN
bracis-19036	188	9	was	be	AUX
bracis-19036	188	10	obtained	obtain	VERB
bracis-19036	188	11	before	before	ADP
bracis-19036	188	12	reaching	reach	VERB
bracis-19036	188	13	the	the	DET
bracis-19036	188	14	first	first	ADJ
bracis-19036	188	15	restart	restart	NOUN
bracis-19036	188	16	point	point	NOUN
bracis-19036	188	17	(	(	PUNCT
bracis-19036	188	18	1,000	1,000	NUM
bracis-19036	188	19	evaluations	evaluation	NOUN
bracis-19036	188	20	)	)	PUNCT
bracis-19036	188	21	.	.	PUNCT
bracis-19036	189	1	in	in	ADP
bracis-19036	189	2	general	general	ADJ
bracis-19036	189	3	,	,	PUNCT
bracis-19036	189	4	most	most	ADJ
bracis-19036	189	5	cgp	cgp	PROPN
bracis-19036	189	6	approaches	approach	NOUN
bracis-19036	189	7	have	have	VERB
bracis-19036	189	8	no	no	DET
bracis-19036	189	9	statistical	statistical	ADJ
bracis-19036	189	10	difference	difference	NOUN
bracis-19036	189	11	when	when	SCONJ
bracis-19036	189	12	compared	compare	VERB
bracis-19036	189	13	to	to	ADP
bracis-19036	189	14	each	each	DET
bracis-19036	189	15	other	other	ADJ
bracis-19036	189	16	,	,	PUNCT
bracis-19036	189	17	both	both	CCONJ
bracis-19036	189	18	in	in	ADP
bracis-19036	189	19	auprc	auprc	ADJ
bracis-19036	189	20	and	and	CCONJ
bracis-19036	189	21	auroc	auroc	NOUN
bracis-19036	189	22	.	.	PUNCT
bracis-19036	190	1	when	when	SCONJ
bracis-19036	190	2	considering	consider	VERB
bracis-19036	190	3	the	the	DET
bracis-19036	190	4	median	median	NOUN
bracis-19036	190	5	,	,	PUNCT
bracis-19036	190	6	we	we	PRON
bracis-19036	190	7	count	count	VERB
bracis-19036	190	8	the	the	DET
bracis-19036	190	9	times	time	NOUN
bracis-19036	190	10	that	that	SCONJ
bracis-19036	190	11	each	each	DET
bracis-19036	190	12	algorithm	algorithm	NOUN
bracis-19036	190	13	reached	reach	VERB
bracis-19036	190	14	the	the	DET
bracis-19036	190	15	best	good	ADJ
bracis-19036	190	16	result	result	NOUN
bracis-19036	190	17	.	.	PUNCT
bracis-19036	191	1	values	value	NOUN
bracis-19036	191	2	in	in	ADP
bracis-19036	191	3	parentheses	parenthesis	NOUN
bracis-19036	191	4	consider	consider	VERB
bracis-19036	191	5	the	the	DET
bracis-19036	191	6	statistical	statistical	ADJ
bracis-19036	191	7	tests	test	NOUN
bracis-19036	191	8	and	and	CCONJ
bracis-19036	191	9	when	when	SCONJ
bracis-19036	191	10	there	there	PRON
bracis-19036	191	11	is	be	VERB
bracis-19036	191	12	no	no	DET
bracis-19036	191	13	statistical	statistical	ADJ
bracis-19036	191	14	difference	difference	NOUN
bracis-19036	191	15	,	,	PUNCT
bracis-19036	191	16	all	all	DET
bracis-19036	191	17	methods	method	NOUN
bracis-19036	191	18	score	score	VERB
bracis-19036	191	19	.	.	PUNCT
bracis-19036	192	1	this	this	DET
bracis-19036	192	2	counting	counting	NOUN
bracis-19036	192	3	is	be	AUX
bracis-19036	192	4	shown	show	VERB
bracis-19036	192	5	in	in	ADP
bracis-19036	192	6	table	table	NOUN
bracis-19036	192	7	 	 	SPACE
bracis-19036	192	8	4	4	NUM
bracis-19036	192	9	.	.	PUNCT
bracis-19036	192	10	fig	fig	NOUN
bracis-19036	192	11	.	.	PUNCT
bracis-19036	193	1	2	2	X
bracis-19036	193	2	.	.	X
bracis-19036	193	3	results	result	NOUN
bracis-19036	193	4	for	for	ADP
bracis-19036	193	5	the	the	DET
bracis-19036	193	6	problems	problem	NOUN
bracis-19036	193	7	considering	consider	VERB
bracis-19036	193	8	all	all	DET
bracis-19036	193	9	scenarios	scenario	NOUN
bracis-19036	193	10	.	.	PUNCT
bracis-19036	194	1	full	full	ADJ
bracis-19036	194	2	size	size	NOUN
bracis-19036	194	3	image	image	NOUN
bracis-19036	194	4	fig	fig	NOUN
bracis-19036	194	5	.	.	PUNCT
bracis-19036	195	1	3	3	X
bracis-19036	195	2	.	.	X
bracis-19036	195	3	pps	pps	PROPN
bracis-19036	195	4	considering	consider	VERB
bracis-19036	195	5	auprc	auprc	ADJ
bracis-19036	195	6	and	and	CCONJ
bracis-19036	195	7	auroc	auroc	NOUN
bracis-19036	195	8	for	for	ADP
bracis-19036	195	9	the	the	DET
bracis-19036	195	10	best	good	ADJ
bracis-19036	195	11	approaches	approach	NOUN
bracis-19036	195	12	.	.	PUNCT
bracis-19036	196	1	full	full	ADJ
bracis-19036	196	2	size	size	NOUN
bracis-19036	196	3	image	image	NOUN
bracis-19036	196	4	also	also	ADV
bracis-19036	196	5	,	,	PUNCT
bracis-19036	196	6	the	the	DET
bracis-19036	196	7	approaches	approach	NOUN
bracis-19036	196	8	using	use	VERB
bracis-19036	196	9	an	an	DET
bracis-19036	196	10	optimization	optimization	NOUN
bracis-19036	196	11	step	step	NOUN
bracis-19036	196	12	performed	perform	VERB
bracis-19036	196	13	better	well	ADV
bracis-19036	196	14	than	than	ADP
bracis-19036	196	15	the	the	DET
bracis-19036	196	16	other	other	ADJ
bracis-19036	196	17	ones	one	NOUN
bracis-19036	196	18	.	.	PUNCT
bracis-19036	197	1	the	the	DET
bracis-19036	197	2	restart	restart	NOUN
bracis-19036	197	3	scheme	scheme	NOUN
bracis-19036	197	4	helps	help	VERB
bracis-19036	197	5	to	to	PART
bracis-19036	197	6	escape	escape	VERB
bracis-19036	197	7	from	from	ADP
bracis-19036	197	8	local	local	ADJ
bracis-19036	197	9	optima	optima	NOUN
bracis-19036	197	10	but	but	CCONJ
bracis-19036	197	11	it	it	PRON
bracis-19036	197	12	does	do	AUX
bracis-19036	197	13	not	not	PART
bracis-19036	197	14	provide	provide	VERB
bracis-19036	197	15	good	good	ADJ
bracis-19036	197	16	results	result	NOUN
bracis-19036	197	17	.	.	PUNCT
bracis-19036	198	1	furthermore	furthermore	ADV
bracis-19036	198	2	,	,	PUNCT
bracis-19036	198	3	the	the	DET
bracis-19036	198	4	results	result	NOUN
bracis-19036	198	5	when	when	SCONJ
bracis-19036	198	6	using	use	VERB
bracis-19036	198	7	\(p_{q}\	\(p_{q}\	NOUN
bracis-19036	198	8	)	)	PUNCT
bracis-19036	198	9	=	=	SYM
bracis-19036	198	10	50	50	NUM
bracis-19036	198	11	%	%	NOUN
bracis-19036	198	12	are	be	AUX
bracis-19036	198	13	better	well	ADJ
bracis-19036	198	14	than	than	ADP
bracis-19036	198	15	the	the	DET
bracis-19036	198	16	standard	standard	ADJ
bracis-19036	198	17	values	value	NOUN
bracis-19036	198	18	presented	present	VERB
bracis-19036	198	19	in	in	ADP
bracis-19036	198	20	 	 	SPACE
bracis-19036	198	21	[	[	X
bracis-19036	198	22	11	11	NUM
bracis-19036	198	23	]	]	PUNCT
bracis-19036	198	24	.	.	PUNCT
bracis-19036	199	1	the	the	DET
bracis-19036	199	2	somo	somo	PROPN
bracis-19036	199	3	population	population	NOUN
bracis-19036	199	4	initialization	initialization	NOUN
bracis-19036	199	5	is	be	AUX
bracis-19036	199	6	essential	essential	ADJ
bracis-19036	199	7	for	for	ADP
bracis-19036	199	8	a	a	DET
bracis-19036	199	9	good	good	ADJ
bracis-19036	199	10	performance	performance	NOUN
bracis-19036	199	11	of	of	ADP
bracis-19036	199	12	the	the	DET
bracis-19036	199	13	algorithm	algorithm	NOUN
bracis-19036	199	14	as	as	ADV
bracis-19036	199	15	well	well	ADV
bracis-19036	199	16	as	as	ADP
bracis-19036	199	17	using	use	VERB
bracis-19036	199	18	\(\lambda	\(\lambda	NOUN
bracis-19036	199	19	\	\	NOUN
bracis-19036	199	20	)	)	PUNCT
bracis-19036	200	1	=	=	SYM
bracis-19036	200	2	1	1	X
bracis-19036	200	3	.	.	PUNCT
bracis-19036	200	4	finally	finally	ADV
bracis-19036	200	5	,	,	PUNCT
bracis-19036	200	6	based	base	VERB
bracis-19036	200	7	on	on	ADP
bracis-19036	200	8	table	table	NOUN
bracis-19036	200	9	 	 	SPACE
bracis-19036	200	10	4	4	NUM
bracis-19036	200	11	,	,	PUNCT
bracis-19036	200	12	one	one	PRON
bracis-19036	200	13	can	can	AUX
bracis-19036	200	14	conclude	conclude	VERB
bracis-19036	200	15	that	that	SCONJ
bracis-19036	200	16	the	the	DET
bracis-19036	200	17	best	good	ADJ
bracis-19036	200	18	methods	method	NOUN
bracis-19036	200	19	are	be	AUX
bracis-19036	200	20	somo	somo	ADJ
bracis-19036	200	21	-	-	PUNCT
bracis-19036	200	22	sam	sam	PROPN
bracis-19036	200	23	and	and	CCONJ
bracis-19036	200	24	somo	somo	PROPN
bracis-19036	200	25	-	-	PUNCT
bracis-19036	200	26	sam	sam	NOUN
bracis-19036	200	27	-	-	PUNCT
bracis-19036	200	28	pq50	pq50	PROPN
bracis-19036	200	29	when	when	SCONJ
bracis-19036	200	30	auprc	auprc	ADJ
bracis-19036	200	31	is	be	AUX
bracis-19036	200	32	considered	consider	VERB
bracis-19036	200	33	.	.	PUNCT
bracis-19036	201	1	for	for	ADP
bracis-19036	201	2	auroc	auroc	NOUN
bracis-19036	201	3	,	,	PUNCT
bracis-19036	201	4	the	the	DET
bracis-19036	201	5	best	good	ADJ
bracis-19036	201	6	algorithms	algorithm	NOUN
bracis-19036	201	7	are	be	AUX
bracis-19036	201	8	somo	somo	ADJ
bracis-19036	201	9	-	-	PUNCT
bracis-19036	201	10	sam	sam	PROPN
bracis-19036	201	11	and	and	CCONJ
bracis-19036	201	12	somo	somo	PROPN
bracis-19036	201	13	.	.	PUNCT
bracis-19036	202	1	however	however	ADV
bracis-19036	202	2	,	,	PUNCT
bracis-19036	202	3	here	here	ADV
bracis-19036	202	4	we	we	PRON
bracis-19036	202	5	consider	consider	VERB
bracis-19036	202	6	one	one	NUM
bracis-19036	202	7	approach	approach	NOUN
bracis-19036	202	8	using	use	VERB
bracis-19036	202	9	the	the	DET
bracis-19036	202	10	standard	standard	ADJ
bracis-19036	202	11	somo	somo	NOUN
bracis-19036	202	12	with	with	ADP
bracis-19036	202	13	sam	sam	PROPN
bracis-19036	202	14	as	as	ADP
bracis-19036	202	15	optimization	optimization	NOUN
bracis-19036	202	16	step	step	NOUN
bracis-19036	202	17	(	(	PUNCT
bracis-19036	202	18	somo	somo	PROPN
bracis-19036	202	19	-	-	PUNCT
bracis-19036	202	20	sam	sam	NOUN
bracis-19036	202	21	)	)	PUNCT
bracis-19036	202	22	and	and	CCONJ
bracis-19036	202	23	another	another	DET
bracis-19036	202	24	approach	approach	NOUN
bracis-19036	202	25	varying	vary	VERB
bracis-19036	202	26	the	the	DET
bracis-19036	202	27	parameter	parameter	NOUN
bracis-19036	202	28	\(p_{q}\	\(p_{q}\	NOUN
bracis-19036	202	29	)	)	PUNCT
bracis-19036	202	30	,	,	PUNCT
bracis-19036	202	31	namely	namely	ADV
bracis-19036	202	32	somo	somo	PROPN
bracis-19036	202	33	-	-	PUNCT
bracis-19036	202	34	sam	sam	NOUN
bracis-19036	202	35	-	-	PUNCT
bracis-19036	202	36	pq50	pq50	PROPN
bracis-19036	202	37	.	.	PUNCT
bracis-19036	203	1	5.2	5.2	NUM
bracis-19036	203	2	comparative	comparative	ADJ
bracis-19036	203	3	analysis	analysis	NOUN
bracis-19036	203	4	with	with	ADP
bracis-19036	203	5	 	 	SPACE
bracis-19036	203	6	genie3	genie3	NOUN
bracis-19036	203	7	as	as	SCONJ
bracis-19036	203	8	observed	observe	VERB
bracis-19036	203	9	in	in	ADP
bracis-19036	203	10	sect	sect	NOUN
bracis-19036	203	11	.	.	PUNCT
bracis-19036	203	12	 	 	SPACE
bracis-19036	203	13	5.1	5.1	NUM
bracis-19036	203	14	,	,	PUNCT
bracis-19036	203	15	the	the	DET
bracis-19036	203	16	two	two	NUM
bracis-19036	203	17	best	good	ADJ
bracis-19036	203	18	cgp	cgp	PROPN
bracis-19036	203	19	variants	variant	NOUN
bracis-19036	203	20	are	be	AUX
bracis-19036	203	21	somo	somo	ADJ
bracis-19036	203	22	-	-	PUNCT
bracis-19036	203	23	sam	sam	PROPN
bracis-19036	203	24	and	and	CCONJ
bracis-19036	203	25	somo	somo	NOUN
bracis-19036	203	26	-	-	PUNCT
bracis-19036	203	27	sampq50	sampq50	NOUN
bracis-19036	203	28	,	,	PUNCT
bracis-19036	203	29	and	and	CCONJ
bracis-19036	203	30	we	we	PRON
bracis-19036	203	31	compare	compare	VERB
bracis-19036	203	32	them	they	PRON
bracis-19036	203	33	here	here	ADV
bracis-19036	203	34	with	with	ADP
bracis-19036	203	35	genie3	genie3	NOUN
bracis-19036	203	36	.	.	PUNCT
bracis-19036	204	1	according	accord	VERB
bracis-19036	204	2	to	to	ADP
bracis-19036	204	3	 	 	SPACE
bracis-19036	204	4	[	[	PUNCT
bracis-19036	204	5	20	20	NUM
bracis-19036	204	6	]	]	PUNCT
bracis-19036	204	7	,	,	PUNCT
bracis-19036	204	8	genie3	genie3	NOUN
bracis-19036	204	9	is	be	AUX
bracis-19036	204	10	the	the	DET
bracis-19036	204	11	best	good	ADJ
bracis-19036	204	12	algorithm	algorithm	NOUN
bracis-19036	204	13	for	for	ADP
bracis-19036	204	14	inferring	infer	VERB
bracis-19036	204	15	grns	grn	NOUN
bracis-19036	204	16	.	.	PUNCT
bracis-19036	205	1	performance	performance	NOUN
bracis-19036	205	2	profiles	profile	NOUN
bracis-19036	205	3	(	(	PUNCT
bracis-19036	205	4	pps	pps	NOUN
bracis-19036	205	5	)	)	PUNCT
bracis-19036	205	6	 	 	SPACE
bracis-19036	206	1	[	[	X
bracis-19036	206	2	5	5	NUM
bracis-19036	206	3	]	]	PUNCT
bracis-19036	206	4	were	be	AUX
bracis-19036	206	5	used	use	VERB
bracis-19036	206	6	in	in	ADP
bracis-19036	206	7	order	order	NOUN
bracis-19036	206	8	to	to	PART
bracis-19036	206	9	analyze	analyze	VERB
bracis-19036	206	10	the	the	DET
bracis-19036	206	11	relative	relative	ADJ
bracis-19036	206	12	performance	performance	NOUN
bracis-19036	206	13	of	of	ADP
bracis-19036	206	14	the	the	DET
bracis-19036	206	15	algorithms	algorithm	NOUN
bracis-19036	206	16	.	.	PUNCT
bracis-19036	207	1	considering	consider	VERB
bracis-19036	207	2	p	p	PRON
bracis-19036	207	3	as	as	ADP
bracis-19036	207	4	a	a	DET
bracis-19036	207	5	particular	particular	ADJ
bracis-19036	207	6	problem	problem	NOUN
bracis-19036	207	7	(	(	PUNCT
bracis-19036	207	8	model	model	NOUN
bracis-19036	207	9	)	)	PUNCT
bracis-19036	207	10	and	and	CCONJ
bracis-19036	207	11	s	s	X
bracis-19036	207	12	as	as	ADP
bracis-19036	207	13	a	a	DET
bracis-19036	207	14	particular	particular	ADJ
bracis-19036	207	15	solver	solver	NOUN
bracis-19036	207	16	,	,	PUNCT
bracis-19036	207	17	\(\rho	\(\rho	PROPN
bracis-19036	207	18	(	(	PUNCT
bracis-19036	207	19	p	p	NOUN
bracis-19036	207	20	,	,	PUNCT
bracis-19036	207	21	s)\	s)\	NOUN
bracis-19036	207	22	)	)	PUNCT
bracis-19036	207	23	is	be	AUX
bracis-19036	207	24	defined	define	VERB
bracis-19036	207	25	as	as	ADP
bracis-19036	207	26	the	the	DET
bracis-19036	207	27	performance	performance	NOUN
bracis-19036	207	28	ratio	ratio	NOUN
bracis-19036	207	29	within	within	ADP
bracis-19036	207	30	a	a	DET
bracis-19036	207	31	factor	factor	NOUN
bracis-19036	207	32	of	of	ADP
bracis-19036	207	33	\(\tau	\(\tau	PROPN
bracis-19036	207	34	\	\	NOUN
bracis-19036	207	35	)	)	PUNCT
bracis-19036	207	36	of	of	ADP
bracis-19036	207	37	the	the	DET
bracis-19036	207	38	best	good	ADJ
bracis-19036	207	39	possible	possible	ADJ
bracis-19036	207	40	ratio	ratio	NOUN
bracis-19036	207	41	.	.	PUNCT
bracis-19036	208	1	from	from	ADP
bracis-19036	208	2	pps	pps	PROPN
bracis-19036	208	3	,	,	PUNCT
bracis-19036	208	4	it	it	PRON
bracis-19036	208	5	is	be	AUX
bracis-19036	208	6	possible	possible	ADJ
bracis-19036	208	7	to	to	PART
bracis-19036	208	8	extract	extract	VERB
bracis-19036	208	9	:	:	PUNCT
bracis-19036	208	10	(	(	PUNCT
bracis-19036	208	11	i	i	NOUN
bracis-19036	208	12	)	)	PUNCT
bracis-19036	208	13	the	the	DET
bracis-19036	208	14	approach	approach	NOUN
bracis-19036	208	15	that	that	PRON
bracis-19036	208	16	obtained	obtain	VERB
bracis-19036	208	17	the	the	DET
bracis-19036	208	18	best	good	ADJ
bracis-19036	208	19	results	result	NOUN
bracis-19036	208	20	for	for	ADP
bracis-19036	208	21	most	most	ADJ
bracis-19036	208	22	problems	problem	NOUN
bracis-19036	208	23	(	(	PUNCT
bracis-19036	208	24	largest	large	ADJ
bracis-19036	208	25	\(\rho	\(\rho	ADJ
bracis-19036	208	26	(	(	PUNCT
bracis-19036	208	27	1)\	1)\	NUM
bracis-19036	208	28	)	)	PUNCT
bracis-19036	208	29	)	)	PUNCT
bracis-19036	208	30	,	,	PUNCT
bracis-19036	208	31	(	(	PUNCT
bracis-19036	208	32	ii	ii	NOUN
bracis-19036	208	33	)	)	PUNCT
bracis-19036	208	34	the	the	DET
bracis-19036	208	35	most	most	ADV
bracis-19036	208	36	reliable	reliable	ADJ
bracis-19036	208	37	approach	approach	NOUN
bracis-19036	208	38	(	(	PUNCT
bracis-19036	208	39	smaller	small	ADJ
bracis-19036	208	40	\(\tau	\(\tau	NOUN
bracis-19036	208	41	\	\	NOUN
bracis-19036	208	42	)	)	PUNCT
bracis-19036	209	1	such	such	ADJ
bracis-19036	209	2	that	that	DET
bracis-19036	209	3	\(\rho	\(\rho	PROPN
bracis-19036	209	4	(	(	PUNCT
bracis-19036	209	5	\tau	\tau	PROPN
bracis-19036	209	6	)	)	PUNCT
bracis-19036	209	7	=	=	SYM
bracis-19036	209	8	1\	1\	NUM
bracis-19036	209	9	)	)	PUNCT
bracis-19036	209	10	)	)	PUNCT
bracis-19036	209	11	,	,	PUNCT
bracis-19036	209	12	and	and	CCONJ
bracis-19036	209	13	(	(	PUNCT
bracis-19036	209	14	iii	iii	X
bracis-19036	209	15	)	)	PUNCT
bracis-19036	209	16	the	the	DET
bracis-19036	209	17	best	good	ADJ
bracis-19036	209	18	overall	overall	ADJ
bracis-19036	209	19	performance	performance	NOUN
bracis-19036	209	20	(	(	PUNCT
bracis-19036	209	21	largest	large	ADJ
bracis-19036	209	22	area	area	NOUN
bracis-19036	209	23	under	under	ADP
bracis-19036	209	24	the	the	DET
bracis-19036	209	25	performance	performance	NOUN
bracis-19036	209	26	profiles	profile	NOUN
bracis-19036	209	27	curves	curve	NOUN
bracis-19036	209	28	)	)	PUNCT
bracis-19036	209	29	.	.	PUNCT
bracis-19036	210	1	moreover	moreover	ADV
bracis-19036	210	2	,	,	PUNCT
bracis-19036	210	3	boxplots	boxplot	NOUN
bracis-19036	210	4	of	of	ADP
bracis-19036	210	5	the	the	DET
bracis-19036	210	6	results	result	NOUN
bracis-19036	210	7	are	be	AUX
bracis-19036	210	8	presented	present	VERB
bracis-19036	210	9	in	in	ADP
bracis-19036	210	10	fig	fig	NOUN
bracis-19036	210	11	.	.	PUNCT
bracis-19036	210	12	 	 	SPACE
bracis-19036	211	1	2	2	NUM
bracis-19036	211	2	.	.	PUNCT
bracis-19036	211	3	also	also	ADV
bracis-19036	211	4	,	,	PUNCT
bracis-19036	211	5	kruskal	kruskal	PROPN
bracis-19036	211	6	wallis	wallis	PROPN
bracis-19036	211	7	statistical	statistical	ADJ
bracis-19036	211	8	test	test	NOUN
bracis-19036	211	9	and	and	CCONJ
bracis-19036	211	10	dunn	dunn	PROPN
bracis-19036	211	11	’s	’s	PART
bracis-19036	211	12	post	post	X
bracis-19036	211	13	hoc	hoc	X
bracis-19036	211	14	test	test	NOUN
bracis-19036	211	15	were	be	AUX
bracis-19036	211	16	carried	carry	VERB
bracis-19036	211	17	out	out	ADP
bracis-19036	211	18	and	and	CCONJ
bracis-19036	211	19	the	the	DET
bracis-19036	211	20	results	result	NOUN
bracis-19036	211	21	show	show	VERB
bracis-19036	211	22	that	that	SCONJ
bracis-19036	211	23	there	there	PRON
bracis-19036	211	24	is	be	VERB
bracis-19036	211	25	statistical	statistical	ADJ
bracis-19036	211	26	difference	difference	NOUN
bracis-19036	211	27	only	only	ADV
bracis-19036	211	28	when	when	SCONJ
bracis-19036	211	29	comparing	compare	VERB
bracis-19036	211	30	cgp	cgp	NOUN
bracis-19036	211	31	approaches	approach	NOUN
bracis-19036	211	32	with	with	ADP
bracis-19036	211	33	genie3	genie3	NOUN
bracis-19036	211	34	.	.	PUNCT
bracis-19036	212	1	based	base	VERB
bracis-19036	212	2	on	on	ADP
bracis-19036	212	3	the	the	DET
bracis-19036	212	4	pps	pps	NOUN
bracis-19036	212	5	presented	present	VERB
bracis-19036	212	6	in	in	ADP
bracis-19036	212	7	fig	fig	NOUN
bracis-19036	212	8	.	.	PUNCT
bracis-19036	212	9	 	 	SPACE
bracis-19036	212	10	3	3	NUM
bracis-19036	212	11	is	be	AUX
bracis-19036	212	12	possible	possible	ADJ
bracis-19036	212	13	to	to	PART
bracis-19036	212	14	conclude	conclude	VERB
bracis-19036	212	15	that	that	PRON
bracis-19036	212	16	:	:	PUNCT
bracis-19036	212	17	(	(	PUNCT
bracis-19036	212	18	i	i	NOUN
bracis-19036	212	19	)	)	PUNCT
bracis-19036	212	20	genie3	genie3	NOUN
bracis-19036	212	21	has	have	VERB
bracis-19036	212	22	the	the	DET
bracis-19036	212	23	best	good	ADJ
bracis-19036	212	24	performance	performance	NOUN
bracis-19036	212	25	in	in	ADP
bracis-19036	212	26	most	most	ADJ
bracis-19036	212	27	of	of	ADP
bracis-19036	212	28	the	the	DET
bracis-19036	212	29	problems	problem	NOUN
bracis-19036	212	30	(	(	PUNCT
bracis-19036	212	31	largest	large	ADJ
bracis-19036	212	32	\(\rho	\(\rho	ADJ
bracis-19036	212	33	(	(	PUNCT
bracis-19036	212	34	1)\	1)\	NUM
bracis-19036	212	35	)	)	PUNCT
bracis-19036	212	36	)	)	PUNCT
bracis-19036	212	37	,	,	PUNCT
bracis-19036	212	38	followed	follow	VERB
bracis-19036	212	39	by	by	ADP
bracis-19036	212	40	somo	somo	PROPN
bracis-19036	212	41	-	-	PUNCT
bracis-19036	212	42	sam	sam	PROPN
bracis-19036	212	43	and	and	CCONJ
bracis-19036	212	44	somo	somo	PROPN
bracis-19036	212	45	-	-	PUNCT
bracis-19036	212	46	sam	sam	NOUN
bracis-19036	212	47	-	-	PUNCT
bracis-19036	212	48	pq50	pq50	PROPN
bracis-19036	212	49	,	,	PUNCT
bracis-19036	212	50	respectively	respectively	ADV
bracis-19036	212	51	.	.	PUNCT
bracis-19036	213	1	(	(	PUNCT
bracis-19036	213	2	ii	ii	NOUN
bracis-19036	213	3	)	)	PUNCT
bracis-19036	213	4	genie3	genie3	NOUN
bracis-19036	213	5	is	be	AUX
bracis-19036	213	6	the	the	DET
bracis-19036	213	7	most	most	ADV
bracis-19036	213	8	reliable	reliable	ADJ
bracis-19036	213	9	variant	variant	NOUN
bracis-19036	213	10	(	(	PUNCT
bracis-19036	213	11	smallest	small	ADJ
bracis-19036	213	12	\(\tau	\(\tau	ADV
bracis-19036	213	13	\	\	NOUN
bracis-19036	213	14	)	)	PUNCT
bracis-19036	213	15	such	such	ADJ
bracis-19036	213	16	that	that	DET
bracis-19036	213	17	\(\rho	\(\rho	PROPN
bracis-19036	213	18	(	(	PUNCT
bracis-19036	213	19	\tau	\tau	PROPN
bracis-19036	213	20	)	)	PUNCT
bracis-19036	214	1	=	=	SYM
bracis-19036	214	2	1\	1\	NUM
bracis-19036	214	3	)	)	PUNCT
bracis-19036	214	4	)	)	PUNCT
bracis-19036	214	5	,	,	PUNCT
bracis-19036	214	6	followed	follow	VERB
bracis-19036	214	7	by	by	ADP
bracis-19036	214	8	somo	somo	PROPN
bracis-19036	214	9	-	-	PUNCT
bracis-19036	214	10	sam	sam	NOUN
bracis-19036	214	11	-	-	PUNCT
bracis-19036	214	12	pq50	pq50	PROPN
bracis-19036	214	13	and	and	CCONJ
bracis-19036	214	14	somo	somo	PROPN
bracis-19036	214	15	-	-	PUNCT
bracis-19036	214	16	sam	sam	PROPN
bracis-19036	214	17	,	,	PUNCT
bracis-19036	214	18	respectively	respectively	ADV
bracis-19036	214	19	,	,	PUNCT
bracis-19036	214	20	and	and	CCONJ
bracis-19036	214	21	;	;	PUNCT
bracis-19036	214	22	(	(	PUNCT
bracis-19036	214	23	iii	iii	X
bracis-19036	214	24	)	)	PUNCT
bracis-19036	214	25	genie3	genie3	NOUN
bracis-19036	214	26	presents	present	VERB
bracis-19036	214	27	the	the	DET
bracis-19036	214	28	best	good	ADJ
bracis-19036	214	29	overall	overall	ADJ
bracis-19036	214	30	performance	performance	NOUN
bracis-19036	214	31	(	(	PUNCT
bracis-19036	214	32	largest	large	ADJ
bracis-19036	214	33	auc	auc	NOUN
bracis-19036	214	34	)	)	PUNCT
bracis-19036	214	35	,	,	PUNCT
bracis-19036	214	36	followed	follow	VERB
bracis-19036	214	37	by	by	ADP
bracis-19036	214	38	somo	somo	PROPN
bracis-19036	214	39	-	-	PUNCT
bracis-19036	214	40	sam	sam	NOUN
bracis-19036	214	41	-	-	PUNCT
bracis-19036	214	42	pq50	pq50	PROPN
bracis-19036	214	43	and	and	CCONJ
bracis-19036	214	44	somo	somo	PROPN
bracis-19036	214	45	-	-	PUNCT
bracis-19036	214	46	sam	sam	PROPN
bracis-19036	214	47	,	,	PUNCT
bracis-19036	214	48	respectively	respectively	ADV
bracis-19036	214	49	.	.	PUNCT
bracis-19036	215	1	thus	thus	ADV
bracis-19036	215	2	,	,	PUNCT
bracis-19036	215	3	genie3	genie3	NOUN
bracis-19036	215	4	is	be	AUX
bracis-19036	215	5	a	a	DET
bracis-19036	215	6	good	good	ADJ
bracis-19036	215	7	choice	choice	NOUN
bracis-19036	215	8	when	when	SCONJ
bracis-19036	215	9	considering	consider	VERB
bracis-19036	215	10	only	only	ADV
bracis-19036	215	11	auprc	auprc	ADJ
bracis-19036	215	12	.	.	PUNCT
bracis-19036	216	1	however	however	ADV
bracis-19036	216	2	,	,	PUNCT
bracis-19036	216	3	as	as	SCONJ
bracis-19036	216	4	highlighted	highlight	VERB
bracis-19036	216	5	in	in	ADP
bracis-19036	216	6	sect	sect	NOUN
bracis-19036	216	7	.	.	PUNCT
bracis-19036	216	8	 	 	SPACE
bracis-19036	216	9	4	4	NUM
bracis-19036	216	10	,	,	PUNCT
bracis-19036	216	11	for	for	ADP
bracis-19036	216	12	many	many	ADJ
bracis-19036	216	13	real	real	ADJ
bracis-19036	216	14	-	-	PUNCT
bracis-19036	216	15	world	world	NOUN
bracis-19036	216	16	medical	medical	ADJ
bracis-19036	216	17	datasets	dataset	NOUN
bracis-19036	216	18	the	the	DET
bracis-19036	216	19	fraction	fraction	NOUN
bracis-19036	216	20	of	of	ADP
bracis-19036	216	21	positives	positive	NOUN
bracis-19036	216	22	is	be	AUX
bracis-19036	216	23	often	often	ADV
bracis-19036	216	24	less	less	ADJ
bracis-19036	216	25	than	than	ADP
bracis-19036	216	26	0.5	0.5	NUM
bracis-19036	216	27	.	.	PUNCT
bracis-19036	217	1	on	on	ADP
bracis-19036	217	2	the	the	DET
bracis-19036	217	3	other	other	ADJ
bracis-19036	217	4	hand	hand	NOUN
bracis-19036	217	5	,	,	PUNCT
bracis-19036	217	6	when	when	SCONJ
bracis-19036	217	7	considering	consider	VERB
bracis-19036	217	8	the	the	DET
bracis-19036	217	9	performance	performance	NOUN
bracis-19036	217	10	profiles	profile	NOUN
bracis-19036	217	11	of	of	ADP
bracis-19036	217	12	auroc	auroc	NOUN
bracis-19036	217	13	,	,	PUNCT
bracis-19036	217	14	we	we	PRON
bracis-19036	217	15	can	can	AUX
bracis-19036	217	16	conclude	conclude	VERB
bracis-19036	217	17	that	that	PRON
bracis-19036	217	18	:	:	PUNCT
bracis-19036	217	19	(	(	PUNCT
bracis-19036	217	20	i	i	NOUN
bracis-19036	217	21	)	)	PUNCT
bracis-19036	217	22	genie3	genie3	NOUN
bracis-19036	217	23	hast	hast	VERB
bracis-19036	217	24	the	the	DET
bracis-19036	217	25	best	good	ADJ
bracis-19036	217	26	performance	performance	NOUN
bracis-19036	217	27	in	in	ADP
bracis-19036	217	28	most	most	ADJ
bracis-19036	217	29	of	of	ADP
bracis-19036	217	30	the	the	DET
bracis-19036	217	31	problems	problem	NOUN
bracis-19036	217	32	,	,	PUNCT
bracis-19036	217	33	followed	follow	VERB
bracis-19036	217	34	by	by	ADP
bracis-19036	217	35	somo	somo	PROPN
bracis-19036	217	36	-	-	PUNCT
bracis-19036	217	37	sam	sam	PROPN
bracis-19036	217	38	and	and	CCONJ
bracis-19036	217	39	somo	somo	PROPN
bracis-19036	217	40	-	-	PUNCT
bracis-19036	217	41	sam-50	sam-50	ADV
bracis-19036	217	42	,	,	PUNCT
bracis-19036	217	43	respectively	respectively	ADV
bracis-19036	217	44	;	;	PUNCT
bracis-19036	217	45	(	(	PUNCT
bracis-19036	217	46	ii	ii	NOUN
bracis-19036	217	47	)	)	PUNCT
bracis-19036	217	48	somo	somo	PROPN
bracis-19036	217	49	-	-	PUNCT
bracis-19036	217	50	sam	sam	PROPN
bracis-19036	217	51	and	and	CCONJ
bracis-19036	217	52	somo	somo	PROPN
bracis-19036	217	53	-	-	PUNCT
bracis-19036	217	54	sam	sam	NOUN
bracis-19036	217	55	-	-	PUNCT
bracis-19036	217	56	pq50	pq50	PROPN
bracis-19036	217	57	are	be	AUX
bracis-19036	217	58	the	the	DET
bracis-19036	217	59	most	most	ADV
bracis-19036	217	60	reliable	reliable	ADJ
bracis-19036	217	61	variants	variant	NOUN
bracis-19036	217	62	,	,	PUNCT
bracis-19036	217	63	and	and	CCONJ
bracis-19036	217	64	;	;	PUNCT
bracis-19036	217	65	(	(	PUNCT
bracis-19036	217	66	iii	iii	X
bracis-19036	217	67	)	)	PUNCT
bracis-19036	217	68	somo	somo	PROPN
bracis-19036	217	69	-	-	PUNCT
bracis-19036	217	70	sam	sam	PROPN
bracis-19036	217	71	presents	present	VERB
bracis-19036	217	72	the	the	DET
bracis-19036	217	73	best	good	ADJ
bracis-19036	217	74	overall	overall	ADJ
bracis-19036	217	75	performance	performance	NOUN
bracis-19036	217	76	,	,	PUNCT
bracis-19036	217	77	followed	follow	VERB
bracis-19036	217	78	by	by	ADP
bracis-19036	217	79	somo	somo	PROPN
bracis-19036	217	80	-	-	PUNCT
bracis-19036	217	81	sam	sam	NOUN
bracis-19036	217	82	-	-	PUNCT
bracis-19036	217	83	pq50	pq50	PROPN
bracis-19036	217	84	and	and	CCONJ
bracis-19036	217	85	genie3	genie3	NOUN
bracis-19036	217	86	,	,	PUNCT
bracis-19036	217	87	respectively	respectively	ADV
bracis-19036	217	88	.	.	PUNCT
bracis-19036	218	1	then	then	ADV
bracis-19036	218	2	,	,	PUNCT
bracis-19036	218	3	somo	somo	PROPN
bracis-19036	218	4	-	-	PUNCT
bracis-19036	218	5	sam	sam	NOUN
bracis-19036	218	6	highlights	highlight	VERB
bracis-19036	218	7	the	the	DET
bracis-19036	218	8	importance	importance	NOUN
bracis-19036	218	9	of	of	ADP
bracis-19036	218	10	using	use	VERB
bracis-19036	218	11	an	an	DET
bracis-19036	218	12	appropriate	appropriate	ADJ
bracis-19036	218	13	optimization	optimization	NOUN
bracis-19036	218	14	step	step	NOUN
bracis-19036	218	15	.	.	PUNCT
bracis-19036	219	1	also	also	ADV
bracis-19036	219	2	,	,	PUNCT
bracis-19036	219	3	somo	somo	PROPN
bracis-19036	219	4	is	be	AUX
bracis-19036	219	5	very	very	ADV
bracis-19036	219	6	sensitive	sensitive	ADJ
bracis-19036	219	7	to	to	ADP
bracis-19036	219	8	the	the	DET
bracis-19036	219	9	parameter	parameter	NOUN
bracis-19036	219	10	\(p_{q}\	\(p_{q}\	NOUN
bracis-19036	219	11	)	)	PUNCT
bracis-19036	219	12	,	,	PUNCT
bracis-19036	219	13	i.e.	i.e.	X
bracis-19036	219	14	keeping	keep	VERB
bracis-19036	219	15	some	some	DET
bracis-19036	219	16	inactive	inactive	ADJ
bracis-19036	219	17	nodes	node	NOUN
bracis-19036	219	18	unchanged	unchanged	ADJ
bracis-19036	219	19	before	before	ADP
bracis-19036	219	20	performing	perform	VERB
bracis-19036	219	21	somo	somo	NOUN
bracis-19036	219	22	helps	help	VERB
bracis-19036	219	23	to	to	PART
bracis-19036	219	24	obtain	obtain	VERB
bracis-19036	219	25	better	well	ADJ
bracis-19036	219	26	results	result	NOUN
bracis-19036	219	27	.	.	PUNCT
bracis-19036	220	1	one	one	NUM
bracis-19036	220	2	possible	possible	ADJ
bracis-19036	220	3	reason	reason	NOUN
bracis-19036	220	4	is	be	AUX
bracis-19036	220	5	the	the	DET
bracis-19036	220	6	fact	fact	NOUN
bracis-19036	220	7	that	that	SCONJ
bracis-19036	220	8	,	,	PUNCT
bracis-19036	220	9	when	when	SCONJ
bracis-19036	220	10	using	use	VERB
bracis-19036	220	11	sam	sam	PROPN
bracis-19036	220	12	,	,	PUNCT
bracis-19036	220	13	we	we	PRON
bracis-19036	220	14	adopt	adopt	VERB
bracis-19036	220	15	\(\lambda	\(\lambda	NOUN
bracis-19036	220	16	=	=	SYM
bracis-19036	220	17	4\	4\	PROPN
bracis-19036	220	18	)	)	PUNCT
bracis-19036	220	19	,	,	PUNCT
bracis-19036	220	20	then	then	ADV
bracis-19036	220	21	,	,	PUNCT
bracis-19036	220	22	cgp	cgp	PROPN
bracis-19036	220	23	is	be	AUX
bracis-19036	220	24	able	able	ADJ
bracis-19036	220	25	to	to	PART
bracis-19036	220	26	create	create	VERB
bracis-19036	220	27	more	more	ADV
bracis-19036	220	28	diverse	diverse	ADJ
bracis-19036	220	29	offspring	offspring	NOUN
bracis-19036	220	30	than	than	ADP
bracis-19036	220	31	with	with	ADP
bracis-19036	220	32	\(\lambda	\(\lambda	NOUN
bracis-19036	220	33	=	=	SYM
bracis-19036	220	34	1\	1\	NUM
bracis-19036	220	35	)	)	PUNCT
bracis-19036	220	36	as	as	ADP
bracis-19036	220	37	the	the	DET
bracis-19036	220	38	standard	standard	ADJ
bracis-19036	220	39	somo	somo	PROPN
bracis-19036	220	40	uses	use	NOUN
bracis-19036	220	41	.	.	PUNCT
bracis-19036	221	1	however	however	ADV
bracis-19036	221	2	,	,	PUNCT
bracis-19036	221	3	only	only	ADV
bracis-19036	221	4	when	when	SCONJ
bracis-19036	221	5	considering	consider	VERB
bracis-19036	221	6	mcad	mcad	PROPN
bracis-19036	221	7	,	,	PUNCT
bracis-19036	221	8	approaches	approach	VERB
bracis-19036	221	9	that	that	PRON
bracis-19036	221	10	use	use	VERB
bracis-19036	221	11	cgp	cgp	NOUN
bracis-19036	221	12	obtained	obtain	VERB
bracis-19036	221	13	better	well	ADJ
bracis-19036	221	14	results	result	NOUN
bracis-19036	221	15	on	on	ADP
bracis-19036	221	16	auprc	auprc	ADJ
bracis-19036	221	17	and	and	CCONJ
bracis-19036	221	18	auroc	auroc	NOUN
bracis-19036	221	19	.	.	PUNCT
bracis-19036	222	1	with	with	ADP
bracis-19036	222	2	respect	respect	NOUN
bracis-19036	222	3	to	to	ADP
bracis-19036	222	4	mcad	mcad	PROPN
bracis-19036	222	5	it	it	PRON
bracis-19036	222	6	is	be	AUX
bracis-19036	222	7	interesting	interesting	ADJ
bracis-19036	222	8	to	to	PART
bracis-19036	222	9	highlight	highlight	VERB
bracis-19036	222	10	that	that	SCONJ
bracis-19036	222	11	this	this	DET
bracis-19036	222	12	problem	problem	NOUN
bracis-19036	222	13	is	be	AUX
bracis-19036	222	14	the	the	DET
bracis-19036	222	15	only	only	ADJ
bracis-19036	222	16	one	one	NUM
bracis-19036	222	17	with	with	ADP
bracis-19036	222	18	2	2	NUM
bracis-19036	222	19	pseudotimes	pseudotime	NOUN
bracis-19036	222	20	.	.	PUNCT
bracis-19036	223	1	the	the	DET
bracis-19036	223	2	evaluation	evaluation	NOUN
bracis-19036	223	3	pipeline	pipeline	NOUN
bracis-19036	223	4	considers	consider	VERB
bracis-19036	223	5	the	the	DET
bracis-19036	223	6	“	"	PUNCT
bracis-19036	223	7	top	top	ADJ
bracis-19036	223	8	k	k	NOUN
bracis-19036	223	9	”	"	PUNCT
bracis-19036	223	10	regulatory	regulatory	ADJ
bracis-19036	223	11	relationships	relationship	NOUN
bracis-19036	223	12	and	and	CCONJ
bracis-19036	223	13	,	,	PUNCT
bracis-19036	223	14	when	when	SCONJ
bracis-19036	223	15	merging	merge	VERB
bracis-19036	223	16	the	the	DET
bracis-19036	223	17	2	2	NUM
bracis-19036	223	18	solutions	solution	NOUN
bracis-19036	223	19	to	to	PART
bracis-19036	223	20	obtain	obtain	VERB
bracis-19036	223	21	the	the	DET
bracis-19036	223	22	final	final	ADJ
bracis-19036	223	23	grn	grn	PROPN
bracis-19036	223	24	,	,	PUNCT
bracis-19036	223	25	it	it	PRON
bracis-19036	223	26	is	be	AUX
bracis-19036	223	27	possible	possible	ADJ
bracis-19036	223	28	to	to	PART
bracis-19036	223	29	construct	construct	VERB
bracis-19036	223	30	a	a	DET
bracis-19036	223	31	smaller	small	ADJ
bracis-19036	223	32	grn	grn	NOUN
bracis-19036	223	33	(	(	PUNCT
bracis-19036	223	34	less	less	ADJ
bracis-19036	223	35	number	number	NOUN
bracis-19036	223	36	of	of	ADP
bracis-19036	223	37	regulatory	regulatory	ADJ
bracis-19036	223	38	relationships	relationship	NOUN
bracis-19036	223	39	)	)	PUNCT
bracis-19036	223	40	that	that	PRON
bracis-19036	223	41	consider	consider	VERB
bracis-19036	223	42	the	the	DET
bracis-19036	223	43	most	most	ADV
bracis-19036	223	44	important	important	ADJ
bracis-19036	223	45	regulatory	regulatory	ADJ
bracis-19036	223	46	relationships	relationship	NOUN
bracis-19036	223	47	leading	lead	VERB
bracis-19036	223	48	to	to	ADP
bracis-19036	223	49	a	a	DET
bracis-19036	223	50	better	well	ADJ
bracis-19036	223	51	evaluation	evaluation	NOUN
bracis-19036	223	52	.	.	PUNCT
bracis-19036	224	1	the	the	DET
bracis-19036	224	2	statistical	statistical	ADJ
bracis-19036	224	3	tests	test	NOUN
bracis-19036	224	4	show	show	VERB
bracis-19036	224	5	that	that	SCONJ
bracis-19036	224	6	there	there	PRON
bracis-19036	224	7	is	be	VERB
bracis-19036	224	8	no	no	DET
bracis-19036	224	9	statistical	statistical	ADJ
bracis-19036	224	10	difference	difference	NOUN
bracis-19036	224	11	between	between	ADP
bracis-19036	224	12	the	the	DET
bracis-19036	224	13	cgp	cgp	PROPN
bracis-19036	224	14	approaches	approach	VERB
bracis-19036	224	15	.	.	PUNCT
bracis-19036	225	1	the	the	DET
bracis-19036	225	2	statistical	statistical	ADJ
bracis-19036	225	3	difference	difference	NOUN
bracis-19036	225	4	is	be	AUX
bracis-19036	225	5	observed	observe	VERB
bracis-19036	225	6	only	only	ADV
bracis-19036	225	7	when	when	SCONJ
bracis-19036	225	8	comparing	compare	VERB
bracis-19036	225	9	the	the	DET
bracis-19036	225	10	cgp	cgp	PROPN
bracis-19036	225	11	variants	variant	NOUN
bracis-19036	225	12	with	with	ADP
bracis-19036	225	13	genie3	genie3	NOUN
bracis-19036	225	14	,	,	PUNCT
bracis-19036	225	15	reinforcing	reinforce	VERB
bracis-19036	225	16	the	the	DET
bracis-19036	225	17	superiority	superiority	NOUN
bracis-19036	225	18	of	of	ADP
bracis-19036	225	19	genie3	genie3	NOUN
bracis-19036	225	20	as	as	SCONJ
bracis-19036	225	21	shown	show	VERB
bracis-19036	225	22	in	in	ADP
bracis-19036	225	23	the	the	DET
bracis-19036	225	24	auprc	auprc	ADJ
bracis-19036	225	25	boxplots	boxplot	NOUN
bracis-19036	225	26	.	.	PUNCT
bracis-19036	226	1	6	6	NUM
bracis-19036	226	2	conclusions	conclusion	NOUN
bracis-19036	226	3	and	and	CCONJ
bracis-19036	226	4	 	 	SPACE
bracis-19036	226	5	future	future	ADJ
bracis-19036	226	6	work	work	NOUN
bracis-19036	226	7	here	here	ADV
bracis-19036	226	8	,	,	PUNCT
bracis-19036	226	9	we	we	PRON
bracis-19036	226	10	analyze	analyze	VERB
bracis-19036	226	11	the	the	DET
bracis-19036	226	12	performance	performance	NOUN
bracis-19036	226	13	of	of	ADP
bracis-19036	226	14	cgp	cgp	PROPN
bracis-19036	226	15	mutation	mutation	PROPN
bracis-19036	226	16	operators	operator	NOUN
bracis-19036	226	17	applied	apply	VERB
bracis-19036	226	18	when	when	SCONJ
bracis-19036	226	19	inferring	infer	VERB
bracis-19036	226	20	grn	grn	PROPN
bracis-19036	226	21	using	use	VERB
bracis-19036	226	22	benchmark	benchmark	NOUN
bracis-19036	226	23	curated	curate	VERB
bracis-19036	226	24	scrna	scrna	NOUN
bracis-19036	226	25	-	-	PUNCT
bracis-19036	226	26	seq	seq	NOUN
bracis-19036	226	27	time	time	NOUN
bracis-19036	226	28	series	series	PROPN
bracis-19036	226	29	data	data	PROPN
bracis-19036	226	30	.	.	PUNCT
bracis-19036	227	1	these	these	DET
bracis-19036	227	2	approaches	approach	NOUN
bracis-19036	227	3	include	include	VERB
bracis-19036	227	4	mainly	mainly	ADV
bracis-19036	227	5	two	two	NUM
bracis-19036	227	6	aspects	aspect	NOUN
bracis-19036	227	7	:	:	PUNCT
bracis-19036	227	8	(	(	PUNCT
bracis-19036	227	9	i	i	NOUN
bracis-19036	227	10	)	)	PUNCT
bracis-19036	227	11	a	a	DET
bracis-19036	227	12	proposal	proposal	NOUN
bracis-19036	227	13	using	use	VERB
bracis-19036	227	14	sam	sam	PROPN
bracis-19036	227	15	to	to	PART
bracis-19036	227	16	optimize	optimize	VERB
bracis-19036	227	17	the	the	DET
bracis-19036	227	18	solution	solution	NOUN
bracis-19036	227	19	obtained	obtain	VERB
bracis-19036	227	20	by	by	ADP
bracis-19036	227	21	somo	somo	NOUN
bracis-19036	227	22	,	,	PUNCT
bracis-19036	227	23	and	and	CCONJ
bracis-19036	227	24	(	(	PUNCT
bracis-19036	227	25	ii	ii	NOUN
bracis-19036	227	26	)	)	PUNCT
bracis-19036	227	27	a	a	DET
bracis-19036	227	28	parameter	parameter	NOUN
bracis-19036	227	29	sensitivity	sensitivity	NOUN
bracis-19036	227	30	analysis	analysis	NOUN
bracis-19036	227	31	for	for	ADP
bracis-19036	227	32	somo	somo	NOUN
bracis-19036	227	33	.	.	PUNCT
bracis-19036	228	1	we	we	PRON
bracis-19036	228	2	compared	compare	VERB
bracis-19036	228	3	the	the	DET
bracis-19036	228	4	cgp	cgp	PROPN
bracis-19036	228	5	approaches	approach	VERB
bracis-19036	228	6	,	,	PUNCT
bracis-19036	228	7	and	and	CCONJ
bracis-19036	228	8	the	the	DET
bracis-19036	228	9	best	well	ADV
bracis-19036	228	10	-	-	PUNCT
bracis-19036	228	11	obtained	obtain	VERB
bracis-19036	228	12	cgp	cgp	PROPN
bracis-19036	228	13	methods	method	NOUN
bracis-19036	228	14	with	with	ADP
bracis-19036	228	15	genie3	genie3	NOUN
bracis-19036	228	16	.	.	PUNCT
bracis-19036	229	1	the	the	DET
bracis-19036	229	2	results	result	NOUN
bracis-19036	229	3	show	show	VERB
bracis-19036	229	4	that	that	SCONJ
bracis-19036	229	5	modifying	modify	VERB
bracis-19036	229	6	\(p_{q}\	\(p_{q}\	NOUN
bracis-19036	229	7	)	)	PUNCT
bracis-19036	229	8	to	to	ADP
bracis-19036	229	9	50	50	NUM
bracis-19036	229	10	%	%	NOUN
bracis-19036	229	11	helped	help	VERB
bracis-19036	229	12	cgp	cgp	PROPN
bracis-19036	229	13	to	to	PART
bracis-19036	229	14	obtain	obtain	VERB
bracis-19036	229	15	better	well	ADJ
bracis-19036	229	16	results	result	NOUN
bracis-19036	229	17	,	,	PUNCT
bracis-19036	229	18	as	as	SCONJ
bracis-19036	229	19	a	a	DET
bracis-19036	229	20	more	more	ADV
bracis-19036	229	21	diverse	diverse	ADJ
bracis-19036	229	22	offspring	offspring	NOUN
bracis-19036	229	23	is	be	AUX
bracis-19036	229	24	generated	generate	VERB
bracis-19036	229	25	.	.	PUNCT
bracis-19036	230	1	genie3	genie3	NOUN
bracis-19036	230	2	performed	perform	VERB
bracis-19036	230	3	better	well	ADV
bracis-19036	230	4	in	in	ADP
bracis-19036	230	5	most	most	ADJ
bracis-19036	230	6	problems	problem	NOUN
bracis-19036	230	7	,	,	PUNCT
bracis-19036	230	8	except	except	SCONJ
bracis-19036	230	9	in	in	ADP
bracis-19036	230	10	mcad	mcad	PROPN
bracis-19036	230	11	.	.	PUNCT
bracis-19036	231	1	the	the	DET
bracis-19036	231	2	mcad	mcad	PROPN
bracis-19036	231	3	problem	problem	NOUN
bracis-19036	231	4	has	have	VERB
bracis-19036	231	5	only	only	ADV
bracis-19036	231	6	two	two	NUM
bracis-19036	231	7	pseudotimes	pseudotime	NOUN
bracis-19036	231	8	and	and	CCONJ
bracis-19036	231	9	the	the	DET
bracis-19036	231	10	cgp	cgp	PROPN
bracis-19036	231	11	solutions	solutions	PROPN
bracis-19036	231	12	’	'	PUNCT
bracis-19036	231	13	merge	merge	NOUN
bracis-19036	231	14	can	can	AUX
bracis-19036	231	15	obtain	obtain	VERB
bracis-19036	231	16	a	a	DET
bracis-19036	231	17	smaller	small	ADJ
bracis-19036	231	18	grn	grn	NOUN
bracis-19036	231	19	that	that	PRON
bracis-19036	231	20	is	be	AUX
bracis-19036	231	21	better	well	ADV
bracis-19036	231	22	evaluated	evaluate	VERB
bracis-19036	231	23	in	in	ADP
bracis-19036	231	24	the	the	DET
bracis-19036	231	25	pipeline	pipeline	NOUN
bracis-19036	231	26	.	.	PUNCT
bracis-19036	232	1	also	also	ADV
bracis-19036	232	2	,	,	PUNCT
bracis-19036	232	3	there	there	PRON
bracis-19036	232	4	is	be	VERB
bracis-19036	232	5	no	no	DET
bracis-19036	232	6	statistical	statistical	ADJ
bracis-19036	232	7	difference	difference	NOUN
bracis-19036	232	8	between	between	ADP
bracis-19036	232	9	the	the	DET
bracis-19036	232	10	cgp	cgp	PROPN
bracis-19036	232	11	approaches	approach	VERB
bracis-19036	232	12	,	,	PUNCT
bracis-19036	232	13	but	but	CCONJ
bracis-19036	232	14	there	there	PRON
bracis-19036	232	15	is	be	VERB
bracis-19036	232	16	when	when	SCONJ
bracis-19036	232	17	comparing	compare	VERB
bracis-19036	232	18	the	the	DET
bracis-19036	232	19	cgp	cgp	PROPN
bracis-19036	232	20	variants	variant	NOUN
bracis-19036	232	21	with	with	ADP
bracis-19036	232	22	genie3	genie3	NOUN
bracis-19036	232	23	.	.	PUNCT
bracis-19036	233	1	according	accord	VERB
bracis-19036	233	2	to	to	ADP
bracis-19036	233	3	pps	pps	PROPN
bracis-19036	233	4	,	,	PUNCT
bracis-19036	233	5	genie3	genie3	NOUN
bracis-19036	233	6	obtained	obtain	VERB
bracis-19036	233	7	the	the	DET
bracis-19036	233	8	best	good	ADJ
bracis-19036	233	9	results	result	NOUN
bracis-19036	233	10	in	in	ADP
bracis-19036	233	11	general	general	ADJ
bracis-19036	233	12	but	but	CCONJ
bracis-19036	233	13	one	one	NUM
bracis-19036	233	14	can	can	AUX
bracis-19036	233	15	highlight	highlight	VERB
bracis-19036	233	16	that	that	SCONJ
bracis-19036	233	17	both	both	CCONJ
bracis-19036	233	18	somo	somo	PROPN
bracis-19036	233	19	-	-	PUNCT
bracis-19036	233	20	sam	sam	PROPN
bracis-19036	233	21	and	and	CCONJ
bracis-19036	233	22	somo	somo	PROPN
bracis-19036	233	23	-	-	PUNCT
bracis-19036	233	24	sam	sam	NOUN
bracis-19036	233	25	-	-	PUNCT
bracis-19036	233	26	pq50	pq50	PROPN
bracis-19036	233	27	are	be	AUX
bracis-19036	233	28	more	more	ADV
bracis-19036	233	29	reliable	reliable	ADJ
bracis-19036	233	30	when	when	SCONJ
bracis-19036	233	31	auroc	auroc	NOUN
bracis-19036	233	32	is	be	AUX
bracis-19036	233	33	considered	consider	VERB
bracis-19036	233	34	.	.	PUNCT
bracis-19036	234	1	furthermore	furthermore	ADV
bracis-19036	234	2	,	,	PUNCT
bracis-19036	234	3	the	the	DET
bracis-19036	234	4	use	use	NOUN
bracis-19036	234	5	of	of	ADP
bracis-19036	234	6	somo	somo	NOUN
bracis-19036	234	7	for	for	ADP
bracis-19036	234	8	obtaining	obtain	VERB
bracis-19036	234	9	faster	fast	ADJ
bracis-19036	234	10	first	first	ADJ
bracis-19036	234	11	feasible	feasible	ADJ
bracis-19036	234	12	solutions	solution	NOUN
bracis-19036	234	13	and	and	CCONJ
bracis-19036	234	14	sam	sam	PROPN
bracis-19036	234	15	as	as	ADP
bracis-19036	234	16	an	an	DET
bracis-19036	234	17	appropriate	appropriate	ADJ
bracis-19036	234	18	optimization	optimization	NOUN
bracis-19036	234	19	step	step	NOUN
bracis-19036	234	20	helps	help	VERB
bracis-19036	234	21	cgp	cgp	PROPN
bracis-19036	234	22	to	to	PART
bracis-19036	234	23	obtain	obtain	VERB
bracis-19036	234	24	better	well	ADJ
bracis-19036	234	25	results	result	NOUN
bracis-19036	234	26	when	when	SCONJ
bracis-19036	234	27	inferring	infer	VERB
bracis-19036	234	28	gene	gene	NOUN
bracis-19036	234	29	regulatory	regulatory	ADJ
bracis-19036	234	30	networks	network	NOUN
bracis-19036	234	31	when	when	SCONJ
bracis-19036	234	32	compared	compare	VERB
bracis-19036	234	33	to	to	ADP
bracis-19036	234	34	the	the	DET
bracis-19036	234	35	standard	standard	ADJ
bracis-19036	234	36	somo	somo	NOUN
bracis-19036	234	37	and	and	CCONJ
bracis-19036	234	38	to	to	ADP
bracis-19036	234	39	the	the	DET
bracis-19036	234	40	standard	standard	ADJ
bracis-19036	234	41	cgp	cgp	PROPN
bracis-19036	234	42	.	.	PUNCT
bracis-19036	235	1	thus	thus	ADV
bracis-19036	235	2	,	,	PUNCT
bracis-19036	235	3	one	one	PRON
bracis-19036	235	4	can	can	AUX
bracis-19036	235	5	conclude	conclude	VERB
bracis-19036	235	6	that	that	SCONJ
bracis-19036	235	7	using	use	VERB
bracis-19036	235	8	sam	sam	PROPN
bracis-19036	235	9	with	with	ADP
bracis-19036	235	10	somo	somo	PROPN
bracis-19036	235	11	improves	improve	VERB
bracis-19036	235	12	the	the	DET
bracis-19036	235	13	inferred	infer	VERB
bracis-19036	235	14	grns	grn	NOUN
bracis-19036	235	15	.	.	PUNCT
bracis-19036	236	1	as	as	ADP
bracis-19036	236	2	future	future	ADJ
bracis-19036	236	3	work	work	NOUN
bracis-19036	236	4	,	,	PUNCT
bracis-19036	236	5	we	we	PRON
bracis-19036	236	6	intend	intend	VERB
bracis-19036	236	7	to	to	PART
bracis-19036	236	8	explore	explore	VERB
bracis-19036	236	9	even	even	ADV
bracis-19036	236	10	more	more	ADV
bracis-19036	236	11	the	the	DET
bracis-19036	236	12	somo	somo	PROPN
bracis-19036	236	13	parameters	parameter	NOUN
bracis-19036	236	14	,	,	PUNCT
bracis-19036	236	15	considering	consider	VERB
bracis-19036	236	16	other	other	ADJ
bracis-19036	236	17	values	value	NOUN
bracis-19036	236	18	of	of	ADP
bracis-19036	236	19	\(p_{q}\	\(p_{q}\	NOUN
bracis-19036	236	20	)	)	PUNCT
bracis-19036	236	21	and	and	CCONJ
bracis-19036	236	22	\(p_{f}\	\(p_{f}\	NOUN
bracis-19036	236	23	)	)	PUNCT
bracis-19036	236	24	in	in	ADP
bracis-19036	236	25	the	the	DET
bracis-19036	236	26	context	context	NOUN
bracis-19036	236	27	of	of	ADP
bracis-19036	236	28	the	the	DET
bracis-19036	236	29	inference	inference	NOUN
bracis-19036	236	30	of	of	ADP
bracis-19036	236	31	grns	grn	NOUN
bracis-19036	236	32	and	and	CCONJ
bracis-19036	236	33	the	the	DET
bracis-19036	236	34	impact	impact	NOUN
bracis-19036	236	35	of	of	ADP
bracis-19036	236	36	\(n_{c}\	\(n_{c}\	NOUN
bracis-19036	236	37	)	)	PUNCT
bracis-19036	236	38	when	when	SCONJ
bracis-19036	236	39	adopting	adopt	VERB
bracis-19036	236	40	values	value	NOUN
bracis-19036	236	41	of	of	ADP
bracis-19036	236	42	\(\lambda	\(\lambda	NOUN
bracis-19036	236	43	>	>	X
bracis-19036	236	44	1\	1\	NUM
bracis-19036	236	45	)	)	PUNCT
bracis-19036	236	46	.	.	PUNCT
bracis-19036	237	1	also	also	ADV
bracis-19036	237	2	,	,	PUNCT
bracis-19036	237	3	we	we	PRON
bracis-19036	237	4	intend	intend	VERB
bracis-19036	237	5	to	to	PART
bracis-19036	237	6	investigate	investigate	VERB
bracis-19036	237	7	the	the	DET
bracis-19036	237	8	impact	impact	NOUN
bracis-19036	237	9	of	of	ADP
bracis-19036	237	10	the	the	DET
bracis-19036	237	11	number	number	NOUN
bracis-19036	237	12	of	of	ADP
bracis-19036	237	13	pseudotimes	pseudotime	NOUN
bracis-19036	237	14	in	in	ADP
bracis-19036	237	15	the	the	DET
bracis-19036	237	16	merging	merge	VERB
bracis-19036	237	17	step	step	NOUN
bracis-19036	237	18	of	of	ADP
bracis-19036	237	19	cgp	cgp	PROPN
bracis-19036	237	20	.	.	PUNCT
bracis-19036	237	21	notes	note	VERB
bracis-19036	237	22	1.https://csaps.readthedocs.io/en/latest/index.html	1.https://csaps.readthedocs.io/en/latest/index.html	NUM
bracis-19036	237	23	.	.	PUNCT
bracis-19036	238	1	2.http://lidecc.cs.uns.edu.ar/files/gedprotools.zip	2.http://lidecc.cs.uns.edu.ar/files/gedprotools.zip	NUM
bracis-19036	238	2	.	.	PUNCT
bracis-19036	239	1	3.https://github.com/ciml	3.https://github.com/ciml	NUM
bracis-19036	239	2	.	.	PUNCT
bracis-19036	240	1	references	reference	NOUN
bracis-19036	240	2	aalto	aalto	PROPN
bracis-19036	240	3	,	,	PUNCT
bracis-19036	240	4	a.	a.	PROPN
bracis-19036	240	5	,	,	PUNCT
bracis-19036	240	6	viitasaari	viitasaari	NOUN
bracis-19036	240	7	,	,	PUNCT
bracis-19036	240	8	l.	l.	PROPN
bracis-19036	240	9	,	,	PUNCT
bracis-19036	240	10	ilmonen	ilmonen	PROPN
bracis-19036	240	11	,	,	PUNCT
bracis-19036	240	12	p.	p.	NOUN
bracis-19036	240	13	,	,	PUNCT
bracis-19036	240	14	mombaerts	mombaert	NOUN
bracis-19036	240	15	,	,	PUNCT
bracis-19036	240	16	l.	l.	PROPN
bracis-19036	240	17	,	,	PUNCT
bracis-19036	240	18	gonçalves	gonçalves	PROPN
bracis-19036	240	19	,	,	PUNCT
bracis-19036	240	20	j.	j.	PROPN
bracis-19036	240	21	:	:	PUNCT
bracis-19036	240	22	gene	gene	NOUN
bracis-19036	240	23	regulatory	regulatory	ADJ
bracis-19036	240	24	network	network	NOUN
bracis-19036	240	25	inference	inference	NOUN
bracis-19036	240	26	from	from	ADP
bracis-19036	240	27	sparsely	sparsely	ADV
bracis-19036	240	28	sampled	sample	VERB
bracis-19036	240	29	noisy	noisy	ADJ
bracis-19036	240	30	data	datum	NOUN
bracis-19036	240	31	.	.	PUNCT
bracis-19036	241	1	nat	nat	PROPN
bracis-19036	241	2	.	.	PUNCT
bracis-19036	242	1	commun	commun	PROPN
bracis-19036	242	2	.	.	PUNCT
bracis-19036	243	1	11(1	11(1	NUM
bracis-19036	243	2	)	)	PUNCT
bracis-19036	243	3	,	,	PUNCT
bracis-19036	243	4	1–9	1–9	NUM
bracis-19036	243	5	(	(	PUNCT
bracis-19036	243	6	2020	2020	NUM
bracis-19036	243	7	)	)	PUNCT
bracis-19036	243	8	google	google	PROPN
bracis-19036	243	9	scholar	scholar	NOUN
bracis-19036	243	10	  	  	SPACE
bracis-19036	243	11	banf	banf	NOUN
bracis-19036	243	12	,	,	PUNCT
bracis-19036	243	13	m.	m.	NOUN
bracis-19036	243	14	,	,	PUNCT
bracis-19036	243	15	rhee	rhee	PROPN
bracis-19036	243	16	,	,	PUNCT
bracis-19036	243	17	s.y	s.y	PROPN
bracis-19036	243	18	.	.	PROPN
bracis-19036	243	19	:	:	PUNCT
bracis-19036	244	1	computational	computational	ADJ
bracis-19036	244	2	inference	inference	NOUN
bracis-19036	244	3	of	of	ADP
bracis-19036	244	4	gene	gene	NOUN
bracis-19036	244	5	regulatory	regulatory	ADJ
bracis-19036	244	6	networks	network	NOUN
bracis-19036	244	7	:	:	PUNCT
bracis-19036	244	8	approaches	approach	NOUN
bracis-19036	244	9	,	,	PUNCT
bracis-19036	244	10	limitations	limitation	NOUN
bracis-19036	244	11	and	and	CCONJ
bracis-19036	244	12	opportunities	opportunity	NOUN
bracis-19036	244	13	.	.	PUNCT
bracis-19036	245	1	biochimica	biochimica	PROPN
bracis-19036	245	2	et	et	PROPN
bracis-19036	245	3	biophysica	biophysica	PROPN
bracis-19036	245	4	acta	acta	PROPN
bracis-19036	245	5	(	(	PUNCT
bracis-19036	245	6	bba	bba	NOUN
bracis-19036	245	7	)	)	PUNCT
bracis-19036	245	8	gene	gene	NOUN
bracis-19036	245	9	regul	regul	NOUN
bracis-19036	245	10	.	.	PUNCT
bracis-19036	246	1	mech	mech	PROPN
bracis-19036	246	2	.	.	PUNCT
bracis-19036	247	1	1860(1	1860(1	NUM
bracis-19036	247	2	)	)	PUNCT
bracis-19036	247	3	,	,	PUNCT
bracis-19036	247	4	41–52	41–52	NUM
bracis-19036	247	5	(	(	PUNCT
bracis-19036	247	6	2017	2017	NUM
bracis-19036	247	7	)	)	PUNCT
bracis-19036	248	1	google	google	PROPN
bracis-19036	248	2	scholar	scholar	NOUN
bracis-19036	248	3	  	  	SPACE
bracis-19036	248	4	chan	chan	PROPN
bracis-19036	248	5	,	,	PUNCT
bracis-19036	248	6	t.e	t.e	PROPN
bracis-19036	248	7	.	.	PROPN
bracis-19036	248	8	,	,	PUNCT
bracis-19036	248	9	stumpf	stumpf	PROPN
bracis-19036	248	10	,	,	PUNCT
bracis-19036	248	11	m.p	m.p	PROPN
bracis-19036	248	12	.	.	PROPN
bracis-19036	248	13	,	,	PUNCT
bracis-19036	248	14	babtie	babtie	PROPN
bracis-19036	248	15	,	,	PUNCT
bracis-19036	248	16	a.c	a.c	PROPN
bracis-19036	248	17	.	.	PROPN
bracis-19036	248	18	:	:	PUNCT
bracis-19036	249	1	gene	gene	NOUN
bracis-19036	249	2	regulatory	regulatory	ADJ
bracis-19036	249	3	network	network	NOUN
bracis-19036	249	4	inference	inference	NOUN
bracis-19036	249	5	from	from	ADP
bracis-19036	249	6	single	single	ADJ
bracis-19036	249	7	-	-	PUNCT
bracis-19036	249	8	cell	cell	NOUN
bracis-19036	249	9	data	datum	NOUN
bracis-19036	249	10	using	use	VERB
bracis-19036	249	11	multivariate	multivariate	NOUN
bracis-19036	249	12	information	information	NOUN
bracis-19036	249	13	measures	measure	NOUN
bracis-19036	249	14	.	.	PUNCT
bracis-19036	250	1	cell	cell	NOUN
bracis-19036	250	2	syst	syst	NOUN
bracis-19036	250	3	.	.	PUNCT
bracis-19036	251	1	5(3	5(3	NUM
bracis-19036	251	2	)	)	PUNCT
bracis-19036	251	3	,	,	PUNCT
bracis-19036	251	4	251–267	251–267	NUM
bracis-19036	251	5	(	(	PUNCT
bracis-19036	251	6	2017	2017	NUM
bracis-19036	251	7	)	)	PUNCT
bracis-19036	251	8	google	google	PROPN
bracis-19036	251	9	scholar	scholar	NOUN
bracis-19036	251	10	  	  	SPACE
bracis-19036	251	11	chen	chen	PROPN
bracis-19036	251	12	,	,	PUNCT
bracis-19036	251	13	s.	s.	PROPN
bracis-19036	251	14	,	,	PUNCT
bracis-19036	251	15	mar	mar	PROPN
bracis-19036	251	16	,	,	PUNCT
bracis-19036	251	17	j.c	j.c	PROPN
bracis-19036	251	18	.	.	PROPN
bracis-19036	251	19	:	:	PUNCT
bracis-19036	252	1	evaluating	evaluate	VERB
bracis-19036	252	2	methods	method	NOUN
bracis-19036	252	3	of	of	ADP
bracis-19036	252	4	inferring	infer	VERB
bracis-19036	252	5	gene	gene	NOUN
bracis-19036	252	6	regulatory	regulatory	ADJ
bracis-19036	252	7	networks	network	NOUN
bracis-19036	252	8	highlights	highlight	VERB
bracis-19036	252	9	their	their	PRON
bracis-19036	252	10	lack	lack	NOUN
bracis-19036	252	11	of	of	ADP
bracis-19036	252	12	performance	performance	NOUN
bracis-19036	252	13	for	for	ADP
bracis-19036	252	14	single	single	ADJ
bracis-19036	252	15	cell	cell	NOUN
bracis-19036	252	16	gene	gene	NOUN
bracis-19036	252	17	expression	expression	NOUN
bracis-19036	252	18	data	datum	NOUN
bracis-19036	252	19	.	.	PUNCT
bracis-19036	253	1	bmc	bmc	PROPN
bracis-19036	253	2	bioinf	bioinf	PROPN
bracis-19036	253	3	.	.	PUNCT
bracis-19036	254	1	19(1	19(1	NUM
bracis-19036	254	2	)	)	PUNCT
bracis-19036	254	3	,	,	PUNCT
bracis-19036	254	4	1–21	1–21	PROPN
bracis-19036	254	5	(	(	PUNCT
bracis-19036	254	6	2018	2018	NUM
bracis-19036	254	7	)	)	PUNCT
bracis-19036	254	8	google	google	PROPN
bracis-19036	254	9	scholar	scholar	NOUN
bracis-19036	254	10	  	  	SPACE
bracis-19036	254	11	dolan	dolan	PROPN
bracis-19036	254	12	,	,	PUNCT
bracis-19036	254	13	e.d	e.d	PROPN
bracis-19036	254	14	.	.	PROPN
bracis-19036	254	15	,	,	PUNCT
bracis-19036	254	16	moré	moré	PROPN
bracis-19036	254	17	,	,	PUNCT
bracis-19036	254	18	j.j	j.j	PROPN
bracis-19036	254	19	.	.	PROPN
bracis-19036	254	20	:	:	PUNCT
bracis-19036	254	21	benchmarking	benchmarke	VERB
bracis-19036	254	22	optimization	optimization	NOUN
bracis-19036	254	23	software	software	NOUN
bracis-19036	254	24	with	with	ADP
bracis-19036	254	25	performance	performance	NOUN
bracis-19036	254	26	profiles	profile	NOUN
bracis-19036	254	27	.	.	PUNCT
bracis-19036	255	1	math	math	NOUN
bracis-19036	255	2	.	.	PUNCT
bracis-19036	256	1	programm	programm	PROPN
bracis-19036	256	2	.	.	PUNCT
bracis-19036	256	3	91(2	91(2	NUM
bracis-19036	256	4	)	)	PUNCT
bracis-19036	256	5	,	,	PUNCT
bracis-19036	256	6	201–213	201–213	NUM
bracis-19036	256	7	(	(	PUNCT
bracis-19036	256	8	2002	2002	NUM
bracis-19036	256	9	)	)	PUNCT
bracis-19036	256	10	google	google	PROPN
bracis-19036	256	11	scholar	scholar	NOUN
bracis-19036	256	12	  	  	SPACE
bracis-19036	256	13	draelos	draelos	PROPN
bracis-19036	256	14	,	,	PUNCT
bracis-19036	256	15	r.	r.	PROPN
bracis-19036	256	16	:	:	PUNCT
bracis-19036	256	17	measuring	measure	VERB
bracis-19036	256	18	performance	performance	NOUN
bracis-19036	256	19	:	:	PUNCT
bracis-19036	256	20	auprc	auprc	ADJ
bracis-19036	256	21	and	and	CCONJ
bracis-19036	256	22	average	average	ADJ
bracis-19036	256	23	precision	precision	NOUN
bracis-19036	256	24	(	(	PUNCT
bracis-19036	256	25	2019	2019	NUM
bracis-19036	256	26	)	)	PUNCT
bracis-19036	256	27	.	.	PUNCT
bracis-19036	257	1	glassboxmedicine.com/2019/03/02/measuring-performance-auprc/	glassboxmedicine.com/2019/03/02/measuring-performance-auprc/	PROPN
bracis-19036	257	2	friedman	friedman	PROPN
bracis-19036	257	3	,	,	PUNCT
bracis-19036	257	4	j.h	j.h	PROPN
bracis-19036	257	5	.	.	PROPN
bracis-19036	257	6	:	:	PUNCT
bracis-19036	257	7	greedy	greedy	ADJ
bracis-19036	257	8	function	function	NOUN
bracis-19036	257	9	approximation	approximation	NOUN
bracis-19036	257	10	:	:	PUNCT
bracis-19036	257	11	a	a	DET
bracis-19036	257	12	gradient	gradient	ADJ
bracis-19036	257	13	boosting	boost	VERB
bracis-19036	257	14	machine	machine	NOUN
bracis-19036	257	15	.	.	PUNCT
bracis-19036	258	1	ann	ann	PROPN
bracis-19036	258	2	.	.	PUNCT
bracis-19036	258	3	statist	statist	PROPN
bracis-19036	258	4	.	.	PUNCT
bracis-19036	258	5	,	,	PUNCT
bracis-19036	259	1	pp	pp	PROPN
bracis-19036	259	2	.	.	PUNCT
bracis-19036	260	1	1189–1232	1189–1232	NUM
bracis-19036	260	2	(	(	PUNCT
bracis-19036	260	3	2001	2001	NUM
bracis-19036	260	4	)	)	PUNCT
bracis-19036	260	5	google	google	PROPN
bracis-19036	260	6	scholar	scholar	NOUN
bracis-19036	260	7	  	  	SPACE
bracis-19036	260	8	gebert	gebert	NOUN
bracis-19036	260	9	,	,	PUNCT
bracis-19036	260	10	j.	j.	PROPN
bracis-19036	260	11	,	,	PUNCT
bracis-19036	260	12	radde	radde	ADJ
bracis-19036	260	13	,	,	PUNCT
bracis-19036	260	14	n.	n.	PROPN
bracis-19036	260	15	,	,	PUNCT
bracis-19036	260	16	weber	weber	PROPN
bracis-19036	260	17	,	,	PUNCT
bracis-19036	260	18	g.w	g.w	PROPN
bracis-19036	260	19	.	.	PUNCT
bracis-19036	260	20	:	:	PUNCT
bracis-19036	261	1	modeling	model	VERB
bracis-19036	261	2	gene	gene	NOUN
bracis-19036	261	3	regulatory	regulatory	ADJ
bracis-19036	261	4	networks	network	NOUN
bracis-19036	261	5	with	with	ADP
bracis-19036	261	6	piecewise	piecewise	NOUN
bracis-19036	261	7	linear	linear	PROPN
bracis-19036	261	8	differential	differential	NOUN
bracis-19036	261	9	equations	equation	NOUN
bracis-19036	261	10	.	.	PUNCT
bracis-19036	262	1	eur	eur	PROPN
bracis-19036	262	2	.	.	PUNCT
bracis-19036	263	1	j.	j.	PROPN
bracis-19036	263	2	oper	oper	PROPN
bracis-19036	263	3	.	.	PUNCT
bracis-19036	264	1	res	re	NOUN
bracis-19036	264	2	.	.	PUNCT
bracis-19036	265	1	181(3	181(3	NUM
bracis-19036	265	2	)	)	PUNCT
bracis-19036	265	3	,	,	PUNCT
bracis-19036	265	4	1148–1165	1148–1165	NUM
bracis-19036	265	5	(	(	PUNCT
bracis-19036	265	6	2007	2007	NUM
bracis-19036	265	7	)	)	PUNCT
bracis-19036	265	8	google	google	PROPN
bracis-19036	265	9	scholar	scholar	NOUN
bracis-19036	265	10	  	  	SPACE
bracis-19036	265	11	goldman	goldman	PROPN
bracis-19036	265	12	,	,	PUNCT
bracis-19036	265	13	b.w	b.w	PROPN
bracis-19036	265	14	.	.	PROPN
bracis-19036	265	15	,	,	PUNCT
bracis-19036	265	16	punch	punch	VERB
bracis-19036	265	17	,	,	PUNCT
bracis-19036	265	18	w.f	w.f	PROPN
bracis-19036	265	19	.	.	PROPN
bracis-19036	265	20	:	:	PUNCT
bracis-19036	266	1	reducing	reduce	VERB
bracis-19036	266	2	wasted	waste	VERB
bracis-19036	266	3	evaluations	evaluation	NOUN
bracis-19036	266	4	in	in	ADP
bracis-19036	266	5	cartesian	cartesian	ADJ
bracis-19036	266	6	genetic	genetic	ADJ
bracis-19036	266	7	programming	programming	NOUN
bracis-19036	266	8	.	.	PUNCT
bracis-19036	267	1	in	in	ADP
bracis-19036	267	2	:	:	PUNCT
bracis-19036	267	3	krawiec	krawiec	PROPN
bracis-19036	267	4	,	,	PUNCT
bracis-19036	267	5	k.	k.	PROPN
bracis-19036	267	6	,	,	PUNCT
bracis-19036	267	7	et	et	PROPN
bracis-19036	267	8	al	al	PROPN
bracis-19036	267	9	.	.	PUNCT
bracis-19036	267	10	(	(	PUNCT
bracis-19036	267	11	eds	ed	NOUN
bracis-19036	267	12	.	.	PUNCT
bracis-19036	267	13	)	)	PUNCT
bracis-19036	267	14	eurogp	eurogp	NOUN
bracis-19036	267	15	2013	2013	NUM
bracis-19036	267	16	.	.	PUNCT
bracis-19036	268	1	lncs	lncs	PROPN
bracis-19036	268	2	,	,	PUNCT
bracis-19036	268	3	vol	vol	NOUN
bracis-19036	268	4	.	.	PROPN
bracis-19036	268	5	7831	7831	NUM
bracis-19036	268	6	,	,	PUNCT
bracis-19036	268	7	pp	pp	ADJ
bracis-19036	268	8	.	.	PUNCT
bracis-19036	269	1	61–72	61–72	NUM
bracis-19036	269	2	.	.	PUNCT
bracis-19036	270	1	springer	springer	NOUN
bracis-19036	270	2	,	,	PUNCT
bracis-19036	270	3	heidelberg	heidelberg	PROPN
bracis-19036	270	4	(	(	PUNCT
bracis-19036	270	5	2013	2013	NUM
bracis-19036	270	6	)	)	PUNCT
bracis-19036	270	7	.	.	PUNCT
bracis-19036	271	1	https://doi.org/10.1007/978-3-642-37207-0_6	https://doi.org/10.1007/978-3-642-37207-0_6	PUNCT
bracis-19036	271	2	haghverdi	haghverdi	ADV
bracis-19036	271	3	,	,	PUNCT
bracis-19036	271	4	l.	l.	PROPN
bracis-19036	271	5	,	,	PUNCT
bracis-19036	271	6	büttner	büttner	PROPN
bracis-19036	271	7	,	,	PUNCT
bracis-19036	271	8	m.	m.	NOUN
bracis-19036	271	9	,	,	PUNCT
bracis-19036	271	10	wolf	wolf	PROPN
bracis-19036	271	11	,	,	PUNCT
bracis-19036	271	12	f.a	f.a	PROPN
bracis-19036	271	13	.	.	PROPN
bracis-19036	271	14	,	,	PUNCT
bracis-19036	271	15	buettner	buettner	PROPN
bracis-19036	271	16	,	,	PUNCT
bracis-19036	271	17	f.	f.	PROPN
bracis-19036	271	18	,	,	PUNCT
bracis-19036	271	19	theis	theis	PROPN
bracis-19036	271	20	,	,	PUNCT
bracis-19036	271	21	f.j	f.j	PROPN
bracis-19036	271	22	.	.	PROPN
bracis-19036	271	23	:	:	PUNCT
bracis-19036	272	1	diffusion	diffusion	NOUN
bracis-19036	272	2	pseudotime	pseudotime	PROPN
bracis-19036	272	3	robustly	robustly	ADV
bracis-19036	272	4	reconstructs	reconstruct	VERB
bracis-19036	272	5	lineage	lineage	NOUN
bracis-19036	272	6	branching	branching	NOUN
bracis-19036	272	7	.	.	PUNCT
bracis-19036	273	1	nat	nat	PROPN
bracis-19036	273	2	.	.	PUNCT
bracis-19036	274	1	methods	method	NOUN
bracis-19036	274	2	13(10	13(10	NUM
bracis-19036	274	3	)	)	PUNCT
bracis-19036	274	4	,	,	PUNCT
bracis-19036	274	5	845	845	NUM
bracis-19036	274	6	(	(	PUNCT
bracis-19036	274	7	2016	2016	NUM
bracis-19036	274	8	)	)	PUNCT
bracis-19036	274	9	google	google	PROPN
bracis-19036	274	10	scholar	scholar	NOUN
bracis-19036	274	11	  	  	SPACE
bracis-19036	274	12	hodan	hodan	PROPN
bracis-19036	274	13	,	,	PUNCT
bracis-19036	274	14	d.	d.	PROPN
bracis-19036	274	15	,	,	PUNCT
bracis-19036	274	16	mrazek	mrazek	NOUN
bracis-19036	274	17	,	,	PUNCT
bracis-19036	274	18	v.	v.	ADV
bracis-19036	274	19	,	,	PUNCT
bracis-19036	274	20	vasicek	vasicek	PROPN
bracis-19036	274	21	,	,	PUNCT
bracis-19036	274	22	z.	z.	PROPN
bracis-19036	274	23	:	:	PUNCT
bracis-19036	274	24	semantically	semantically	ADV
bracis-19036	274	25	-	-	PUNCT
bracis-19036	274	26	oriented	orient	VERB
bracis-19036	274	27	mutation	mutation	NOUN
bracis-19036	274	28	operator	operator	NOUN
bracis-19036	274	29	in	in	ADP
bracis-19036	274	30	cartesian	cartesian	ADJ
bracis-19036	274	31	genetic	genetic	ADJ
bracis-19036	274	32	programming	programming	NOUN
bracis-19036	274	33	for	for	ADP
bracis-19036	274	34	evolutionary	evolutionary	ADJ
bracis-19036	274	35	circuit	circuit	NOUN
bracis-19036	274	36	design	design	NOUN
bracis-19036	274	37	.	.	PUNCT
bracis-19036	275	1	in	in	ADP
bracis-19036	275	2	:	:	PUNCT
bracis-19036	275	3	proceedings	proceeding	NOUN
bracis-19036	275	4	of	of	ADP
bracis-19036	275	5	the	the	DET
bracis-19036	275	6	2020	2020	NUM
bracis-19036	275	7	genetic	genetic	ADJ
bracis-19036	275	8	and	and	CCONJ
bracis-19036	275	9	evolutionary	evolutionary	ADJ
bracis-19036	275	10	computation	computation	NOUN
bracis-19036	275	11	conference	conference	NOUN
bracis-19036	275	12	,	,	PUNCT
bracis-19036	275	13	pp	pp	ADP
bracis-19036	275	14	.	.	PUNCT
bracis-19036	276	1	940–948	940–948	NUM
bracis-19036	276	2	(	(	PUNCT
bracis-19036	276	3	2020	2020	NUM
bracis-19036	276	4	)	)	PUNCT
bracis-19036	276	5	google	google	PROPN
bracis-19036	276	6	scholar	scholar	NOUN
bracis-19036	276	7	  	  	SPACE
bracis-19036	276	8	irrthum	irrthum	NOUN
bracis-19036	276	9	,	,	PUNCT
bracis-19036	276	10	a.	a.	NOUN
bracis-19036	276	11	,	,	PUNCT
bracis-19036	276	12	wehenkel	wehenkel	NOUN
bracis-19036	276	13	,	,	PUNCT
bracis-19036	276	14	l.	l.	PROPN
bracis-19036	276	15	,	,	PUNCT
bracis-19036	276	16	geurts	geurt	NOUN
bracis-19036	276	17	,	,	PUNCT
bracis-19036	276	18	p.	p.	PROPN
bracis-19036	276	19	,	,	PUNCT
bracis-19036	276	20	et	et	PROPN
bracis-19036	276	21	al	al	PROPN
bracis-19036	276	22	.	.	PROPN
bracis-19036	276	23	:	:	PUNCT
bracis-19036	277	1	inferring	infer	VERB
bracis-19036	277	2	regulatory	regulatory	ADJ
bracis-19036	277	3	networks	network	NOUN
bracis-19036	277	4	from	from	ADP
bracis-19036	277	5	expression	expression	NOUN
bracis-19036	277	6	data	datum	NOUN
bracis-19036	277	7	using	use	VERB
bracis-19036	277	8	tree	tree	NOUN
bracis-19036	277	9	-	-	PUNCT
bracis-19036	277	10	based	base	VERB
bracis-19036	277	11	methods	method	NOUN
bracis-19036	277	12	.	.	PUNCT
bracis-19036	278	1	plos	plos	PROPN
bracis-19036	278	2	one	one	NUM
bracis-19036	278	3	5(9	5(9	NUM
bracis-19036	278	4	)	)	PUNCT
bracis-19036	278	5	,	,	PUNCT
bracis-19036	278	6	e12776	e12776	PROPN
bracis-19036	278	7	(	(	PUNCT
bracis-19036	278	8	2010	2010	NUM
bracis-19036	278	9	)	)	PUNCT
bracis-19036	278	10	article	article	NOUN
bracis-19036	278	11	  	  	SPACE
bracis-19036	278	12	google	google	PROPN
bracis-19036	278	13	scholar	scholar	NOUN
bracis-19036	278	14	  	  	SPACE
bracis-19036	278	15	jackson	jackson	PROPN
bracis-19036	278	16	,	,	PUNCT
bracis-19036	278	17	c.a	c.a	PROPN
bracis-19036	278	18	.	.	PROPN
bracis-19036	278	19	,	,	PUNCT
bracis-19036	278	20	castro	castro	PROPN
bracis-19036	278	21	,	,	PUNCT
bracis-19036	278	22	d.m	d.m	PROPN
bracis-19036	278	23	.	.	PROPN
bracis-19036	278	24	,	,	PUNCT
bracis-19036	278	25	saldi	saldi	PROPN
bracis-19036	278	26	,	,	PUNCT
bracis-19036	278	27	g.a	g.a	PROPN
bracis-19036	278	28	.	.	PROPN
bracis-19036	278	29	,	,	PUNCT
bracis-19036	278	30	bonneau	bonneau	PROPN
bracis-19036	278	31	,	,	PUNCT
bracis-19036	278	32	r.	r.	PROPN
bracis-19036	278	33	,	,	PUNCT
bracis-19036	278	34	gresham	gresham	PROPN
bracis-19036	278	35	,	,	PUNCT
bracis-19036	278	36	d.	d.	PROPN
bracis-19036	278	37	:	:	PUNCT
bracis-19036	278	38	gene	gene	NOUN
bracis-19036	278	39	regulatory	regulatory	ADJ
bracis-19036	278	40	network	network	NOUN
bracis-19036	278	41	reconstruction	reconstruction	NOUN
bracis-19036	278	42	using	use	VERB
bracis-19036	278	43	single	single	ADJ
bracis-19036	278	44	-	-	PUNCT
bracis-19036	278	45	cell	cell	NOUN
bracis-19036	278	46	rna	rna	NOUN
bracis-19036	278	47	sequencing	sequencing	NOUN
bracis-19036	278	48	of	of	ADP
bracis-19036	278	49	barcoded	barcode	VERB
bracis-19036	278	50	genotypes	genotype	NOUN
bracis-19036	278	51	in	in	ADP
bracis-19036	278	52	diverse	diverse	ADJ
bracis-19036	278	53	environments	environment	NOUN
bracis-19036	278	54	.	.	PUNCT
bracis-19036	279	1	elife	elife	NOUN
bracis-19036	279	2	9	9	NUM
bracis-19036	279	3	,	,	PUNCT
bracis-19036	279	4	e51254	e51254	X
bracis-19036	279	5	(	(	PUNCT
bracis-19036	279	6	2020	2020	NUM
bracis-19036	279	7	)	)	PUNCT
bracis-19036	279	8	article	article	NOUN
bracis-19036	279	9	  	  	SPACE
bracis-19036	279	10	google	google	PROPN
bracis-19036	279	11	scholar	scholar	NOUN
bracis-19036	279	12	  	  	SPACE
bracis-19036	279	13	liu	liu	PROPN
bracis-19036	279	14	,	,	PUNCT
bracis-19036	279	15	s.	s.	PROPN
bracis-19036	279	16	,	,	PUNCT
bracis-19036	279	17	trapnell	trapnell	INTJ
bracis-19036	279	18	,	,	PUNCT
bracis-19036	279	19	c.	c.	NOUN
bracis-19036	279	20	:	:	PUNCT
bracis-19036	279	21	single	single	ADJ
bracis-19036	279	22	-	-	PUNCT
bracis-19036	279	23	cell	cell	NOUN
bracis-19036	279	24	transcriptome	transcriptome	ADJ
bracis-19036	279	25	sequencing	sequencing	NOUN
bracis-19036	279	26	:	:	PUNCT
bracis-19036	279	27	recent	recent	ADJ
bracis-19036	279	28	advances	advance	NOUN
bracis-19036	279	29	and	and	CCONJ
bracis-19036	279	30	remaining	remain	VERB
bracis-19036	279	31	challenges	challenge	NOUN
bracis-19036	279	32	.	.	PUNCT
bracis-19036	280	1	f1000research	f1000research	NOUN
bracis-19036	280	2	5	5	NUM
bracis-19036	280	3	(	(	PUNCT
bracis-19036	280	4	2016	2016	NUM
bracis-19036	280	5	)	)	PUNCT
bracis-19036	280	6	google	google	PROPN
bracis-19036	280	7	scholar	scholar	NOUN
bracis-19036	280	8	  	  	SPACE
bracis-19036	280	9	ma	ma	PROPN
bracis-19036	280	10	,	,	PUNCT
bracis-19036	280	11	b.	b.	PROPN
bracis-19036	280	12	,	,	PUNCT
bracis-19036	280	13	jiao	jiao	PROPN
bracis-19036	280	14	,	,	PUNCT
bracis-19036	280	15	x.	x.	PROPN
bracis-19036	280	16	,	,	PUNCT
bracis-19036	280	17	meng	meng	PROPN
bracis-19036	280	18	,	,	PUNCT
bracis-19036	280	19	f.	f.	PROPN
bracis-19036	280	20	,	,	PUNCT
bracis-19036	280	21	xu	xu	PROPN
bracis-19036	280	22	,	,	PUNCT
bracis-19036	280	23	f.	f.	PROPN
bracis-19036	280	24	,	,	PUNCT
bracis-19036	280	25	geng	geng	PROPN
bracis-19036	280	26	,	,	PUNCT
bracis-19036	280	27	y.	y.	PROPN
bracis-19036	280	28	,	,	PUNCT
bracis-19036	280	29	gao	gao	PROPN
bracis-19036	280	30	,	,	PUNCT
bracis-19036	280	31	r.	r.	PROPN
bracis-19036	280	32	,	,	PUNCT
bracis-19036	280	33	wang	wang	PROPN
bracis-19036	280	34	,	,	PUNCT
bracis-19036	280	35	w.	w.	PROPN
bracis-19036	280	36	,	,	PUNCT
bracis-19036	280	37	sun	sun	PROPN
bracis-19036	280	38	,	,	PUNCT
bracis-19036	280	39	y.	y.	NOUN
bracis-19036	280	40	:	:	PUNCT
bracis-19036	280	41	identification	identification	NOUN
bracis-19036	280	42	of	of	ADP
bracis-19036	280	43	gene	gene	NOUN
bracis-19036	280	44	regulatory	regulatory	ADJ
bracis-19036	280	45	networks	network	NOUN
bracis-19036	280	46	by	by	ADP
bracis-19036	280	47	integrating	integrate	VERB
bracis-19036	280	48	genetic	genetic	ADJ
bracis-19036	280	49	programming	programming	NOUN
bracis-19036	280	50	with	with	ADP
bracis-19036	280	51	particle	particle	NOUN
bracis-19036	280	52	filtering	filtering	NOUN
bracis-19036	280	53	.	.	PUNCT
bracis-19036	281	1	ieee	ieee	NOUN
bracis-19036	281	2	access	access	NOUN
bracis-19036	281	3	7	7	NUM
bracis-19036	281	4	,	,	PUNCT
bracis-19036	281	5	113760–113770	113760–113770	NUM
bracis-19036	281	6	(	(	PUNCT
bracis-19036	281	7	2019	2019	NUM
bracis-19036	281	8	)	)	PUNCT
bracis-19036	281	9	article	article	NOUN
bracis-19036	281	10	  	  	SPACE
bracis-19036	281	11	google	google	PROPN
bracis-19036	281	12	scholar	scholar	NOUN
bracis-19036	281	13	  	  	SPACE
bracis-19036	281	14	mccall	mccall	PROPN
bracis-19036	281	15	,	,	PUNCT
bracis-19036	281	16	m.n	m.n	PROPN
bracis-19036	281	17	.	.	PUNCT
bracis-19036	281	18	:	:	PUNCT
bracis-19036	282	1	estimation	estimation	NOUN
bracis-19036	282	2	of	of	ADP
bracis-19036	282	3	gene	gene	NOUN
bracis-19036	282	4	regulatory	regulatory	ADJ
bracis-19036	282	5	networks	network	NOUN
bracis-19036	282	6	.	.	PUNCT
bracis-19036	283	1	postdoc	postdoc	NOUN
bracis-19036	283	2	j.	j.	PROPN
bracis-19036	283	3	postdoc	postdoc	PROPN
bracis-19036	283	4	.	.	PUNCT
bracis-19036	284	1	res	re	NOUN
bracis-19036	284	2	.	.	PUNCT
bracis-19036	284	3	postdoc	postdoc	PROPN
bracis-19036	284	4	.	.	PUNCT
bracis-19036	285	1	affairs	affair	NOUN
bracis-19036	285	2	,	,	PUNCT
bracis-19036	285	3	1(1	1(1	NUM
bracis-19036	285	4	)	)	PUNCT
bracis-19036	285	5	,	,	PUNCT
bracis-19036	285	6	60	60	NUM
bracis-19036	285	7	(	(	PUNCT
bracis-19036	285	8	2013	2013	NUM
bracis-19036	285	9	)	)	PUNCT
bracis-19036	285	10	google	google	PROPN
bracis-19036	285	11	scholar	scholar	NOUN
bracis-19036	285	12	  	  	SPACE
bracis-19036	285	13	miller	miller	PROPN
bracis-19036	285	14	,	,	PUNCT
bracis-19036	285	15	j.f	j.f	PROPN
bracis-19036	285	16	.	.	PROPN
bracis-19036	285	17	:	:	PUNCT
bracis-19036	286	1	cartesian	cartesian	ADJ
bracis-19036	286	2	genetic	genetic	ADJ
bracis-19036	286	3	programming	programming	NOUN
bracis-19036	286	4	.	.	PUNCT
bracis-19036	287	1	cgp	cgp	PROPN
bracis-19036	287	2	,	,	PUNCT
bracis-19036	287	3	pp	pp	PROPN
bracis-19036	287	4	.	.	PUNCT
bracis-19036	288	1	17–34	17–34	NUM
bracis-19036	288	2	(	(	PUNCT
bracis-19036	288	3	2011	2011	NUM
bracis-19036	288	4	)	)	PUNCT
bracis-19036	288	5	google	google	PROPN
bracis-19036	288	6	scholar	scholar	NOUN
bracis-19036	288	7	  	  	SPACE
bracis-19036	288	8	miller	miller	PROPN
bracis-19036	288	9	,	,	PUNCT
bracis-19036	288	10	j.f	j.f	PROPN
bracis-19036	288	11	.	.	PROPN
bracis-19036	288	12	,	,	PUNCT
bracis-19036	288	13	thomson	thomson	PROPN
bracis-19036	288	14	,	,	PUNCT
bracis-19036	288	15	p.	p.	PROPN
bracis-19036	288	16	,	,	PUNCT
bracis-19036	288	17	fogarty	fogarty	PROPN
bracis-19036	288	18	,	,	PUNCT
bracis-19036	288	19	t.	t.	PROPN
bracis-19036	288	20	:	:	PUNCT
bracis-19036	288	21	designing	design	VERB
bracis-19036	288	22	electronic	electronic	ADJ
bracis-19036	288	23	circuits	circuit	NOUN
bracis-19036	288	24	using	use	VERB
bracis-19036	288	25	evolutionary	evolutionary	ADJ
bracis-19036	288	26	algorithms	algorithm	NOUN
bracis-19036	288	27	.	.	PUNCT
bracis-19036	289	1	arithmetic	arithmetic	ADJ
bracis-19036	289	2	circuits	circuit	NOUN
bracis-19036	289	3	:	:	PUNCT
bracis-19036	289	4	a	a	DET
bracis-19036	289	5	case	case	NOUN
bracis-19036	289	6	study	study	NOUN
bracis-19036	289	7	(	(	PUNCT
bracis-19036	289	8	1997	1997	NUM
bracis-19036	289	9	)	)	PUNCT
bracis-19036	289	10	google	google	NOUN
bracis-19036	289	11	scholar	scholar	NOUN
bracis-19036	289	12	  	  	SPACE
bracis-19036	289	13	moerman	moerman	NOUN
bracis-19036	289	14	,	,	PUNCT
bracis-19036	289	15	t.	t.	PROPN
bracis-19036	289	16	,	,	PUNCT
bracis-19036	289	17	et	et	PROPN
bracis-19036	289	18	al	al	PROPN
bracis-19036	289	19	.	.	PROPN
bracis-19036	289	20	:	:	PUNCT
bracis-19036	290	1	grnboost2	grnboost2	NOUN
bracis-19036	290	2	and	and	CCONJ
bracis-19036	290	3	arboreto	arboreto	ADJ
bracis-19036	290	4	:	:	PUNCT
bracis-19036	290	5	efficient	efficient	ADJ
bracis-19036	290	6	and	and	CCONJ
bracis-19036	290	7	scalable	scalable	ADJ
bracis-19036	290	8	inference	inference	NOUN
bracis-19036	290	9	of	of	ADP
bracis-19036	290	10	gene	gene	NOUN
bracis-19036	290	11	regulatory	regulatory	ADJ
bracis-19036	290	12	networks	network	NOUN
bracis-19036	290	13	.	.	PUNCT
bracis-19036	291	1	bioinformatics	bioinformatic	NOUN
bracis-19036	291	2	35(12	35(12	NUM
bracis-19036	291	3	)	)	PUNCT
bracis-19036	291	4	,	,	PUNCT
bracis-19036	291	5	2159–2161	2159–2161	NUM
bracis-19036	291	6	(	(	PUNCT
bracis-19036	291	7	2019	2019	NUM
bracis-19036	291	8	)	)	PUNCT
bracis-19036	291	9	google	google	NOUN
bracis-19036	291	10	scholar	scholar	NOUN
bracis-19036	291	11	  	  	SPACE
bracis-19036	291	12	pratapa	pratapa	VERB
bracis-19036	291	13	,	,	PUNCT
bracis-19036	291	14	a.	a.	NOUN
bracis-19036	291	15	,	,	PUNCT
bracis-19036	291	16	jalihal	jalihal	PROPN
bracis-19036	291	17	,	,	PUNCT
bracis-19036	291	18	a.p	a.p	PROPN
bracis-19036	291	19	.	.	PROPN
bracis-19036	291	20	,	,	PUNCT
bracis-19036	291	21	law	law	NOUN
bracis-19036	291	22	,	,	PUNCT
bracis-19036	291	23	j.n	j.n	PROPN
bracis-19036	291	24	.	.	PROPN
bracis-19036	291	25	,	,	PUNCT
bracis-19036	291	26	bharadwaj	bharadwaj	PROPN
bracis-19036	291	27	,	,	PUNCT
bracis-19036	291	28	a.	a.	PROPN
bracis-19036	291	29	,	,	PUNCT
bracis-19036	291	30	murali	murali	PROPN
bracis-19036	291	31	,	,	PUNCT
bracis-19036	291	32	t.	t.	PROPN
bracis-19036	291	33	:	:	PUNCT
bracis-19036	291	34	benchmarking	benchmarke	VERB
bracis-19036	291	35	algorithms	algorithm	NOUN
bracis-19036	291	36	for	for	ADP
bracis-19036	291	37	gene	gene	NOUN
bracis-19036	291	38	regulatory	regulatory	ADJ
bracis-19036	291	39	network	network	NOUN
bracis-19036	291	40	inference	inference	NOUN
bracis-19036	291	41	from	from	ADP
bracis-19036	291	42	single	single	ADJ
bracis-19036	291	43	-	-	PUNCT
bracis-19036	291	44	cell	cell	NOUN
bracis-19036	291	45	transcriptomic	transcriptomic	ADJ
bracis-19036	291	46	data	datum	NOUN
bracis-19036	291	47	.	.	PUNCT
bracis-19036	292	1	nat	nat	PROPN
bracis-19036	292	2	.	.	PUNCT
bracis-19036	293	1	methods	method	NOUN
bracis-19036	293	2	17(2	17(2	NUM
bracis-19036	293	3	)	)	PUNCT
bracis-19036	293	4	,	,	PUNCT
bracis-19036	293	5	147–154	147–154	NUM
bracis-19036	293	6	(	(	PUNCT
bracis-19036	293	7	2020	2020	NUM
bracis-19036	293	8	)	)	PUNCT
bracis-19036	293	9	google	google	PROPN
bracis-19036	293	10	scholar	scholar	NOUN
bracis-19036	293	11	  	  	SPACE
bracis-19036	293	12	qiu	qiu	PROPN
bracis-19036	293	13	,	,	PUNCT
bracis-19036	293	14	x.	x.	PROPN
bracis-19036	293	15	,	,	PUNCT
bracis-19036	293	16	mao	mao	PROPN
bracis-19036	293	17	,	,	PUNCT
bracis-19036	293	18	q.	q.	PROPN
bracis-19036	293	19	,	,	PUNCT
bracis-19036	293	20	tang	tang	PROPN
bracis-19036	293	21	,	,	PUNCT
bracis-19036	293	22	y.	y.	PROPN
bracis-19036	293	23	,	,	PUNCT
bracis-19036	293	24	wang	wang	PROPN
bracis-19036	293	25	,	,	PUNCT
bracis-19036	293	26	l.	l.	PROPN
bracis-19036	293	27	,	,	PUNCT
bracis-19036	293	28	chawla	chawla	PROPN
bracis-19036	293	29	,	,	PUNCT
bracis-19036	293	30	r.	r.	PROPN
bracis-19036	293	31	,	,	PUNCT
bracis-19036	293	32	pliner	pliner	NOUN
bracis-19036	293	33	,	,	PUNCT
bracis-19036	293	34	h.a	h.a	PROPN
bracis-19036	293	35	.	.	PROPN
bracis-19036	293	36	,	,	PUNCT
bracis-19036	293	37	trapnell	trapnell	INTJ
bracis-19036	293	38	,	,	PUNCT
bracis-19036	293	39	c.	c.	PROPN
bracis-19036	293	40	:	:	PUNCT
bracis-19036	293	41	reversed	reverse	VERB
bracis-19036	293	42	graph	graph	NOUN
bracis-19036	293	43	embedding	embed	VERB
bracis-19036	293	44	resolves	resolve	NOUN
bracis-19036	293	45	complex	complex	ADJ
bracis-19036	293	46	single	single	ADJ
bracis-19036	293	47	-	-	PUNCT
bracis-19036	293	48	cell	cell	NOUN
bracis-19036	293	49	trajectories	trajectory	NOUN
bracis-19036	293	50	.	.	PUNCT
bracis-19036	294	1	nat	nat	NOUN
bracis-19036	294	2	.	.	PUNCT
bracis-19036	295	1	methods	method	NOUN
bracis-19036	295	2	14(10	14(10	NUM
bracis-19036	295	3	)	)	PUNCT
bracis-19036	295	4	,	,	PUNCT
bracis-19036	295	5	979	979	NUM
bracis-19036	295	6	(	(	PUNCT
bracis-19036	295	7	2017	2017	NUM
bracis-19036	295	8	)	)	PUNCT
bracis-19036	295	9	google	google	PROPN
bracis-19036	295	10	scholar	scholar	NOUN
bracis-19036	295	11	  	  	SPACE
bracis-19036	295	12	huynh	huynh	PROPN
bracis-19036	295	13	-	-	PUNCT
bracis-19036	295	14	thu	thu	PROPN
bracis-19036	295	15	,	,	PUNCT
bracis-19036	295	16	v.a	v.a	PROPN
bracis-19036	295	17	.	.	PROPN
bracis-19036	295	18	,	,	PUNCT
bracis-19036	295	19	sanguinetti	sanguinetti	PROPN
bracis-19036	295	20	,	,	PUNCT
bracis-19036	295	21	g.	g.	NOUN
bracis-19036	295	22	:	:	PUNCT
bracis-19036	295	23	gene	gene	NOUN
bracis-19036	295	24	regulatory	regulatory	ADJ
bracis-19036	295	25	network	network	NOUN
bracis-19036	295	26	inference	inference	NOUN
bracis-19036	295	27	:	:	PUNCT
bracis-19036	295	28	an	an	DET
bracis-19036	295	29	introductory	introductory	ADJ
bracis-19036	295	30	survey	survey	NOUN
bracis-19036	295	31	.	.	PUNCT
bracis-19036	296	1	in	in	ADP
bracis-19036	296	2	:	:	PUNCT
bracis-19036	296	3	sanguinetti	sanguinetti	PROPN
bracis-19036	296	4	,	,	PUNCT
bracis-19036	296	5	g.	g.	PROPN
bracis-19036	296	6	,	,	PUNCT
bracis-19036	296	7	huynh	huynh	PROPN
bracis-19036	296	8	-	-	PUNCT
bracis-19036	296	9	thu	thu	PROPN
bracis-19036	296	10	,	,	PUNCT
bracis-19036	296	11	v.a	v.a	PROPN
bracis-19036	296	12	.	.	PROPN
bracis-19036	296	13	(	(	PUNCT
bracis-19036	296	14	eds	ed	NOUN
bracis-19036	296	15	.	.	PUNCT
bracis-19036	296	16	)	)	PUNCT
bracis-19036	296	17	gene	gene	NOUN
bracis-19036	296	18	regulatory	regulatory	ADJ
bracis-19036	296	19	networks	network	NOUN
bracis-19036	296	20	.	.	PUNCT
bracis-19036	297	1	mmb	mmb	PROPN
bracis-19036	297	2	,	,	PUNCT
bracis-19036	297	3	vol	vol	NOUN
bracis-19036	297	4	.	.	PROPN
bracis-19036	297	5	1883	1883	NUM
bracis-19036	297	6	,	,	PUNCT
bracis-19036	297	7	pp	pp	ADP
bracis-19036	297	8	.	.	PUNCT
bracis-19036	298	1	1–23	1–23	PROPN
bracis-19036	298	2	.	.	PUNCT
bracis-19036	299	1	springer	springer	NOUN
bracis-19036	299	2	,	,	PUNCT
bracis-19036	299	3	new	new	PROPN
bracis-19036	299	4	york	york	PROPN
bracis-19036	299	5	(	(	PUNCT
bracis-19036	299	6	2019	2019	NUM
bracis-19036	299	7	)	)	PUNCT
bracis-19036	299	8	.	.	PUNCT
bracis-19036	300	1	https://doi.org/10.1007/978-1-4939-8882-2_1	https://doi.org/10.1007/978-1-4939-8882-2_1	NOUN
bracis-19036	300	2	setty	setty	NOUN
bracis-19036	300	3	,	,	PUNCT
bracis-19036	300	4	m.	m.	NOUN
bracis-19036	300	5	,	,	PUNCT
bracis-19036	300	6	et	et	PROPN
bracis-19036	300	7	al	al	PROPN
bracis-19036	300	8	.	.	PUNCT
bracis-19036	300	9	:	:	PUNCT
bracis-19036	301	1	wishbone	wishbone	NOUN
bracis-19036	301	2	identifies	identify	VERB
bracis-19036	301	3	bifurcating	bifurcate	VERB
bracis-19036	301	4	developmental	developmental	ADJ
bracis-19036	301	5	trajectories	trajectory	NOUN
bracis-19036	301	6	from	from	ADP
bracis-19036	301	7	single	single	ADJ
bracis-19036	301	8	-	-	PUNCT
bracis-19036	301	9	cell	cell	NOUN
bracis-19036	301	10	data	datum	NOUN
bracis-19036	301	11	.	.	PUNCT
bracis-19036	302	1	nat	nat	NOUN
bracis-19036	302	2	.	.	PUNCT
bracis-19036	303	1	biotech	biotech	PROPN
bracis-19036	303	2	.	.	PUNCT
bracis-19036	304	1	34(6	34(6	NUM
bracis-19036	304	2	)	)	PUNCT
bracis-19036	304	3	,	,	PUNCT
bracis-19036	304	4	637–645	637–645	NUM
bracis-19036	304	5	(	(	PUNCT
bracis-19036	304	6	2016	2016	NUM
bracis-19036	304	7	)	)	PUNCT
bracis-19036	304	8	google	google	PROPN
bracis-19036	304	9	scholar	scholar	NOUN
bracis-19036	304	10	  	  	SPACE
bracis-19036	304	11	da	da	PROPN
bracis-19036	304	12	silva	silva	PROPN
bracis-19036	304	13	,	,	PUNCT
bracis-19036	304	14	j.e.h	j.e.h	ADV
bracis-19036	304	15	.	.	PUNCT
bracis-19036	304	16	,	,	PUNCT
bracis-19036	304	17	et	et	PROPN
bracis-19036	304	18	al	al	PROPN
bracis-19036	304	19	.	.	PROPN
bracis-19036	304	20	:	:	PUNCT
bracis-19036	305	1	inferring	infer	VERB
bracis-19036	305	2	gene	gene	NOUN
bracis-19036	305	3	regulatory	regulatory	ADJ
bracis-19036	305	4	network	network	NOUN
bracis-19036	305	5	models	model	NOUN
bracis-19036	305	6	from	from	ADP
bracis-19036	305	7	time	time	NOUN
bracis-19036	305	8	-	-	PUNCT
bracis-19036	305	9	series	series	NOUN
bracis-19036	305	10	data	datum	NOUN
bracis-19036	305	11	using	use	VERB
bracis-19036	305	12	metaheuristics	metaheuristic	NOUN
bracis-19036	305	13	.	.	PUNCT
bracis-19036	306	1	in	in	ADP
bracis-19036	306	2	:	:	PUNCT
bracis-19036	306	3	ieee	ieee	PROPN
bracis-19036	306	4	congress	congress	PROPN
bracis-19036	306	5	on	on	ADP
bracis-19036	306	6	evolutionary	evolutionary	ADJ
bracis-19036	306	7	computer	computer	NOUN
bracis-19036	306	8	(	(	PUNCT
bracis-19036	306	9	cec	cec	PROPN
bracis-19036	306	10	)	)	PUNCT
bracis-19036	306	11	,	,	PUNCT
bracis-19036	306	12	pp	pp	PROPN
bracis-19036	306	13	.	.	PUNCT
bracis-19036	307	1	1–8	1–8	X
bracis-19036	307	2	.	.	PUNCT
bracis-19036	307	3	ieee	ieee	PROPN
bracis-19036	307	4	(	(	PUNCT
bracis-19036	307	5	2020	2020	NUM
bracis-19036	307	6	)	)	PUNCT
bracis-19036	307	7	google	google	PROPN
bracis-19036	307	8	scholar	scholar	NOUN
bracis-19036	307	9	  	  	SPACE
bracis-19036	307	10	da	da	PROPN
bracis-19036	307	11	silva	silva	PROPN
bracis-19036	307	12	,	,	PUNCT
bracis-19036	307	13	j.e.h	j.e.h	ADV
bracis-19036	307	14	.	.	PROPN
bracis-19036	307	15	,	,	PUNCT
bracis-19036	307	16	bernardino	bernardino	PROPN
bracis-19036	307	17	,	,	PUNCT
bracis-19036	307	18	h.s	h.s	PROPN
bracis-19036	307	19	.	.	PROPN
bracis-19036	307	20	,	,	PUNCT
bracis-19036	307	21	de	de	PROPN
bracis-19036	307	22	oliveira	oliveira	PROPN
bracis-19036	307	23	,	,	PUNCT
bracis-19036	307	24	i.l	i.l	PROPN
bracis-19036	307	25	.	.	PUNCT
bracis-19036	307	26	:	:	PUNCT
bracis-19036	308	1	inference	inference	NOUN
bracis-19036	308	2	of	of	ADP
bracis-19036	308	3	gene	gene	NOUN
bracis-19036	308	4	regulatory	regulatory	ADJ
bracis-19036	308	5	networks	network	NOUN
bracis-19036	308	6	from	from	ADP
bracis-19036	308	7	single	single	ADJ
bracis-19036	308	8	-	-	PUNCT
bracis-19036	308	9	cell	cell	NOUN
bracis-19036	308	10	rna	rna	NOUN
bracis-19036	308	11	-	-	PUNCT
bracis-19036	308	12	sequencing	sequence	VERB
bracis-19036	308	13	data	datum	NOUN
bracis-19036	308	14	using	use	VERB
bracis-19036	308	15	cartesian	cartesian	ADJ
bracis-19036	308	16	genetic	genetic	ADJ
bracis-19036	308	17	programming	programming	NOUN
bracis-19036	308	18	(	(	PUNCT
bracis-19036	308	19	under	under	ADP
bracis-19036	308	20	review	review	NOUN
bracis-19036	308	21	)	)	PUNCT
bracis-19036	308	22	.	.	PUNCT
bracis-19036	309	1	in	in	ADP
bracis-19036	309	2	:	:	PUNCT
bracis-19036	309	3	bioinformatics	bioinformatic	NOUN
bracis-19036	309	4	,	,	PUNCT
bracis-19036	309	5	pp	pp	ADJ
bracis-19036	309	6	.	.	PUNCT
bracis-19036	310	1	1–8	1–8	X
bracis-19036	310	2	.	.	PUNCT
bracis-19036	311	1	oxford	oxford	PROPN
bracis-19036	311	2	(	(	PUNCT
bracis-19036	311	3	2021	2021	NUM
bracis-19036	311	4	)	)	PUNCT
bracis-19036	311	5	google	google	NOUN
bracis-19036	311	6	scholar	scholar	NOUN
bracis-19036	311	7	  	  	SPACE
bracis-19036	311	8	streichert	streichert	NOUN
bracis-19036	311	9	,	,	PUNCT
bracis-19036	311	10	f.	f.	PROPN
bracis-19036	311	11	,	,	PUNCT
bracis-19036	311	12	et	et	PROPN
bracis-19036	311	13	al	al	PROPN
bracis-19036	311	14	.	.	PROPN
bracis-19036	311	15	:	:	PUNCT
bracis-19036	311	16	comparing	compare	VERB
bracis-19036	311	17	genetic	genetic	ADJ
bracis-19036	311	18	programming	programming	NOUN
bracis-19036	311	19	and	and	CCONJ
bracis-19036	311	20	evolution	evolution	NOUN
bracis-19036	311	21	strategies	strategy	NOUN
bracis-19036	311	22	on	on	ADP
bracis-19036	311	23	inferring	infer	VERB
bracis-19036	311	24	gene	gene	NOUN
bracis-19036	311	25	regulatory	regulatory	ADJ
bracis-19036	311	26	networks	network	NOUN
bracis-19036	311	27	.	.	PUNCT
bracis-19036	312	1	in	in	ADP
bracis-19036	312	2	:	:	PUNCT
bracis-19036	312	3	deb	deb	PROPN
bracis-19036	312	4	,	,	PUNCT
bracis-19036	312	5	k.	k.	PROPN
bracis-19036	312	6	(	(	PUNCT
bracis-19036	312	7	ed	ed	AUX
bracis-19036	312	8	.	.	PUNCT
bracis-19036	312	9	)	)	PUNCT
bracis-19036	312	10	gecco	gecco	PROPN
bracis-19036	312	11	2004	2004	NUM
bracis-19036	312	12	.	.	PUNCT
bracis-19036	313	1	lncs	lncs	PROPN
bracis-19036	313	2	,	,	PUNCT
bracis-19036	313	3	vol	vol	NOUN
bracis-19036	313	4	.	.	PUNCT
bracis-19036	313	5	3102	3102	NUM
bracis-19036	313	6	,	,	PUNCT
bracis-19036	313	7	pp	pp	ADP
bracis-19036	313	8	.	.	PUNCT
bracis-19036	314	1	471–480	471–480	NUM
bracis-19036	314	2	.	.	PUNCT
bracis-19036	314	3	springer	springer	NOUN
bracis-19036	314	4	,	,	PUNCT
bracis-19036	314	5	heidelberg	heidelberg	PROPN
bracis-19036	314	6	(	(	PUNCT
bracis-19036	314	7	2004	2004	NUM
bracis-19036	314	8	)	)	PUNCT
bracis-19036	314	9	.	.	PUNCT
bracis-19036	315	1	https://doi.org/10.1007/978-3-540-24854-5_47	https://doi.org/10.1007/978-3-540-24854-5_47	PROPN
bracis-19036	315	2	trapnell	trapnell	INTJ
bracis-19036	315	3	,	,	PUNCT
bracis-19036	315	4	c.	c.	PROPN
bracis-19036	315	5	,	,	PUNCT
bracis-19036	315	6	et	et	PROPN
bracis-19036	315	7	al	al	PROPN
bracis-19036	315	8	.	.	PUNCT
bracis-19036	315	9	:	:	PUNCT
bracis-19036	315	10	the	the	DET
bracis-19036	315	11	dynamics	dynamic	NOUN
bracis-19036	315	12	and	and	CCONJ
bracis-19036	315	13	regulators	regulator	NOUN
bracis-19036	315	14	of	of	ADP
bracis-19036	315	15	cell	cell	NOUN
bracis-19036	315	16	fate	fate	NOUN
bracis-19036	315	17	decisions	decision	NOUN
bracis-19036	315	18	are	be	AUX
bracis-19036	315	19	revealed	reveal	VERB
bracis-19036	315	20	by	by	ADP
bracis-19036	315	21	pseudotemporal	pseudotemporal	ADJ
bracis-19036	315	22	ordering	ordering	NOUN
bracis-19036	315	23	of	of	ADP
bracis-19036	315	24	single	single	ADJ
bracis-19036	315	25	cells	cell	NOUN
bracis-19036	315	26	.	.	PUNCT
bracis-19036	316	1	nat	nat	NOUN
bracis-19036	316	2	.	.	PUNCT
bracis-19036	317	1	biotechnol	biotechnol	PROPN
bracis-19036	317	2	.	.	PUNCT
bracis-19036	318	1	32(4	32(4	NUM
bracis-19036	318	2	)	)	PUNCT
bracis-19036	318	3	,	,	PUNCT
bracis-19036	318	4	381	381	NUM
bracis-19036	318	5	(	(	PUNCT
bracis-19036	318	6	2014	2014	NUM
bracis-19036	318	7	)	)	PUNCT
bracis-19036	318	8	google	google	PROPN
bracis-19036	318	9	scholar	scholar	NOUN
bracis-19036	318	10	  	  	SPACE
bracis-19036	318	11	wang	wang	PROPN
bracis-19036	318	12	,	,	PUNCT
bracis-19036	318	13	r.s	r.s	PROPN
bracis-19036	318	14	.	.	PROPN
bracis-19036	318	15	,	,	PUNCT
bracis-19036	318	16	saadatpour	saadatpour	PROPN
bracis-19036	318	17	,	,	PUNCT
bracis-19036	318	18	a.	a.	PROPN
bracis-19036	318	19	,	,	PUNCT
bracis-19036	318	20	albert	albert	PROPN
bracis-19036	318	21	,	,	PUNCT
bracis-19036	318	22	r.	r.	PROPN
bracis-19036	318	23	:	:	PUNCT
bracis-19036	318	24	boolean	boolean	ADJ
bracis-19036	318	25	modeling	modeling	NOUN
bracis-19036	318	26	in	in	ADP
bracis-19036	318	27	systems	system	NOUN
bracis-19036	318	28	biology	biology	NOUN
bracis-19036	318	29	:	:	PUNCT
bracis-19036	318	30	an	an	DET
bracis-19036	318	31	overview	overview	NOUN
bracis-19036	318	32	of	of	ADP
bracis-19036	318	33	methodology	methodology	NOUN
bracis-19036	318	34	and	and	CCONJ
bracis-19036	318	35	applications	application	NOUN
bracis-19036	318	36	.	.	PUNCT
bracis-19036	319	1	phys	phy	NOUN
bracis-19036	319	2	.	.	PUNCT
bracis-19036	320	1	biol	biol	PROPN
bracis-19036	320	2	.	.	PUNCT
bracis-19036	321	1	9(5	9(5	NUM
bracis-19036	321	2	)	)	PUNCT
bracis-19036	322	1	,	,	PUNCT
bracis-19036	322	2	055001	055001	NUM
bracis-19036	322	3	(	(	PUNCT
bracis-19036	322	4	2012	2012	NUM
bracis-19036	322	5	)	)	PUNCT
bracis-19036	322	6	google	google	PROPN
bracis-19036	322	7	scholar	scholar	NOUN
bracis-19036	322	8	  	  	SPACE
bracis-19036	322	9	download	download	NOUN
bracis-19036	322	10	references	reference	NOUN
bracis-19036	322	11	acknowledgements	acknowledgement	NOUN
bracis-19036	322	12	we	we	PRON
bracis-19036	322	13	thank	thank	VERB
bracis-19036	322	14	the	the	DET
bracis-19036	322	15	support	support	NOUN
bracis-19036	322	16	provided	provide	VERB
bracis-19036	322	17	by	by	ADP
bracis-19036	322	18	faperj	faperj	PROPN
bracis-19036	322	19	,	,	PUNCT
bracis-19036	322	20	fapesp	fapesp	PROPN
bracis-19036	322	21	,	,	PUNCT
bracis-19036	322	22	fapemig	fapemig	PROPN
bracis-19036	322	23	,	,	PUNCT
bracis-19036	322	24	capes	cape	NOUN
bracis-19036	322	25	,	,	PUNCT
bracis-19036	322	26	cnpq	cnpq	NOUN
bracis-19036	322	27	,	,	PUNCT
bracis-19036	322	28	ufjf	ufjf	NOUN
bracis-19036	322	29	,	,	PUNCT
bracis-19036	322	30	and	and	CCONJ
bracis-19036	322	31	amazon	amazon	PROPN
bracis-19036	322	32	aws	aws	PROPN
bracis-19036	322	33	.	.	PUNCT
bracis-19036	323	1	author	author	NOUN
bracis-19036	323	2	information	information	NOUN
bracis-19036	323	3	authors	author	NOUN
bracis-19036	323	4	and	and	CCONJ
bracis-19036	323	5	affiliations	affiliation	NOUN
bracis-19036	323	6	universidade	universidade	PROPN
bracis-19036	323	7	federal	federal	PROPN
bracis-19036	323	8	de	de	PROPN
bracis-19036	323	9	juiz	juiz	PROPN
bracis-19036	323	10	de	de	PROPN
bracis-19036	323	11	fora	fora	PROPN
bracis-19036	323	12	,	,	PUNCT
bracis-19036	323	13	juiz	juiz	PROPN
bracis-19036	323	14	de	de	PROPN
bracis-19036	323	15	fora	fora	PROPN
bracis-19036	323	16	,	,	PUNCT
bracis-19036	323	17	mg	mg	PROPN
bracis-19036	323	18	,	,	PUNCT
bracis-19036	323	19	brazil	brazil	PROPN
bracis-19036	323	20	josé	josé	PROPN
bracis-19036	323	21	eduardo	eduardo	PROPN
bracis-19036	323	22	h.	h.	PROPN
bracis-19036	323	23	da	da	PROPN
bracis-19036	323	24	silva	silva	PROPN
bracis-19036	323	25	,	,	PUNCT
bracis-19036	323	26	 	 	SPACE
bracis-19036	323	27	heder	heder	PROPN
bracis-19036	323	28	s.	s.	PROPN
bracis-19036	323	29	bernardino	bernardino	PROPN
bracis-19036	323	30	,	,	PUNCT
bracis-19036	323	31	 	 	SPACE
bracis-19036	323	32	itamar	itamar	PROPN
bracis-19036	323	33	l.	l.	PROPN
bracis-19036	323	34	de	de	PROPN
bracis-19036	323	35	oliveira	oliveira	PROPN
bracis-19036	323	36	,	,	PUNCT
bracis-19036	323	37	 	 	SPACE
bracis-19036	323	38	alex	alex	PROPN
bracis-19036	323	39	b.	b.	PROPN
bracis-19036	323	40	vieira	vieira	PROPN
bracis-19036	323	41	 	 	SPACE
bracis-19036	323	42	&	&	CCONJ
bracis-19036	323	43	 	 	SPACE
bracis-19036	323	44	helio	helio	PROPN
bracis-19036	323	45	j.	j.	PROPN
bracis-19036	323	46	c.	c.	PROPN
bracis-19036	323	47	barbosa	barbosa	PROPN
bracis-19036	323	48	laboratório	laboratório	PROPN
bracis-19036	323	49	nacional	nacional	PROPN
bracis-19036	323	50	de	de	X
bracis-19036	323	51	computação	computação	PROPN
bracis-19036	323	52	científica	científica	PROPN
bracis-19036	323	53	,	,	PUNCT
bracis-19036	323	54	petrópolis	petrópolis	PROPN
bracis-19036	323	55	,	,	PUNCT
bracis-19036	323	56	rj	rj	PROPN
bracis-19036	323	57	,	,	PUNCT
bracis-19036	323	58	brazil	brazil	PROPN
bracis-19036	323	59	helio	helio	PROPN
bracis-19036	323	60	j.	j.	PROPN
bracis-19036	323	61	c.	c.	PROPN
bracis-19036	323	62	barbosa	barbosa	PROPN
bracis-19036	323	63	authors	authors	PROPN
bracis-19036	323	64	josé	josé	PROPN
bracis-19036	323	65	eduardo	eduardo	PROPN
bracis-19036	323	66	h.	h.	PROPN
bracis-19036	323	67	da	da	PROPN
bracis-19036	323	68	silvaview	silvaview	PROPN
bracis-19036	323	69	author	author	NOUN
bracis-19036	323	70	publications	publication	NOUN
bracis-19036	323	71	search	search	NOUN
bracis-19036	323	72	author	author	NOUN
bracis-19036	323	73	on	on	ADP
bracis-19036	323	74	:	:	PUNCT
bracis-19036	323	75	pubmed	pubmed	PROPN
bracis-19036	323	76	 	 	SPACE
bracis-19036	323	77	google	google	PROPN
bracis-19036	323	78	scholar	scholar	PROPN
bracis-19036	323	79	heder	heder	PROPN
bracis-19036	323	80	s.	s.	PROPN
bracis-19036	323	81	bernardinoview	bernardinoview	PROPN
bracis-19036	323	82	author	author	NOUN
bracis-19036	323	83	publications	publication	NOUN
bracis-19036	323	84	search	search	NOUN
bracis-19036	323	85	author	author	NOUN
bracis-19036	323	86	on	on	ADP
bracis-19036	323	87	:	:	PUNCT
bracis-19036	323	88	pubmed	pubmed	PROPN
bracis-19036	323	89	 	 	SPACE
bracis-19036	323	90	google	google	PROPN
bracis-19036	323	91	scholar	scholar	PROPN
bracis-19036	323	92	itamar	itamar	PROPN
bracis-19036	323	93	l.	l.	PROPN
bracis-19036	323	94	de	de	PROPN
bracis-19036	323	95	oliveiraview	oliveiraview	PROPN
bracis-19036	323	96	author	author	NOUN
bracis-19036	323	97	publications	publication	NOUN
bracis-19036	323	98	search	search	NOUN
bracis-19036	323	99	author	author	NOUN
bracis-19036	323	100	on	on	ADP
bracis-19036	323	101	:	:	PUNCT
bracis-19036	323	102	pubmed	pubmed	PROPN
bracis-19036	323	103	 	 	SPACE
bracis-19036	323	104	google	google	PROPN
bracis-19036	323	105	scholar	scholar	PROPN
bracis-19036	323	106	alex	alex	PROPN
bracis-19036	323	107	b.	b.	PROPN
bracis-19036	323	108	vieiraview	vieiraview	PROPN
bracis-19036	323	109	author	author	NOUN
bracis-19036	323	110	publications	publication	VERB
bracis-19036	323	111	search	search	NOUN
bracis-19036	323	112	author	author	NOUN
bracis-19036	323	113	on	on	ADP
bracis-19036	323	114	:	:	PUNCT
bracis-19036	323	115	pubmed	pubmed	PROPN
bracis-19036	323	116	 	 	SPACE
bracis-19036	323	117	google	google	PROPN
bracis-19036	323	118	scholar	scholar	NOUN
bracis-19036	323	119	helio	helio	PROPN
bracis-19036	323	120	j.	j.	PROPN
bracis-19036	323	121	c.	c.	PROPN
bracis-19036	323	122	barbosaview	barbosaview	PROPN
bracis-19036	323	123	author	author	NOUN
bracis-19036	323	124	publications	publication	NOUN
bracis-19036	323	125	search	search	NOUN
bracis-19036	323	126	author	author	NOUN
bracis-19036	323	127	on	on	ADP
bracis-19036	323	128	:	:	PUNCT
bracis-19036	323	129	pubmed	pubmed	PROPN
bracis-19036	323	130	 	 	SPACE
bracis-19036	323	131	google	google	PROPN
bracis-19036	323	132	scholar	scholar	NOUN
bracis-19036	323	133	corresponding	correspond	VERB
bracis-19036	323	134	author	author	NOUN
bracis-19036	323	135	correspondence	correspondence	NOUN
bracis-19036	323	136	to	to	ADP
bracis-19036	323	137	josé	josé	PROPN
bracis-19036	323	138	eduardo	eduardo	PROPN
bracis-19036	323	139	h.	h.	PROPN
bracis-19036	323	140	da	da	PROPN
bracis-19036	323	141	silva	silva	PROPN
bracis-19036	323	142	.	.	PUNCT
bracis-19036	324	1	editor	editor	NOUN
bracis-19036	324	2	information	information	NOUN
bracis-19036	324	3	editors	editor	NOUN
bracis-19036	324	4	and	and	CCONJ
bracis-19036	324	5	affiliations	affiliation	NOUN
bracis-19036	324	6	universidade	universidade	PROPN
bracis-19036	324	7	federal	federal	PROPN
bracis-19036	324	8	de	de	X
bracis-19036	324	9	sergipe	sergipe	PROPN
bracis-19036	324	10	,	,	PUNCT
bracis-19036	324	11	são	são	NOUN
bracis-19036	324	12	cristóvão	cristóvão	PROPN
bracis-19036	324	13	,	,	PUNCT
bracis-19036	324	14	brazil	brazil	PROPN
bracis-19036	324	15	andré	andré	PROPN
bracis-19036	324	16	britto	britto	PROPN
bracis-19036	324	17	universidade	universidade	PROPN
bracis-19036	324	18	de	de	PROPN
bracis-19036	324	19	são	são	PROPN
bracis-19036	324	20	paulo	paulo	PROPN
bracis-19036	324	21	,	,	PUNCT
bracis-19036	324	22	são	são	PROPN
bracis-19036	324	23	paulo	paulo	PROPN
bracis-19036	324	24	,	,	PUNCT
bracis-19036	324	25	brazil	brazil	PROPN
bracis-19036	324	26	karina	karina	PROPN
bracis-19036	324	27	valdivia	valdivia	PROPN
bracis-19036	324	28	delgado	delgado	VERB
bracis-19036	324	29	rights	right	NOUN
bracis-19036	324	30	and	and	CCONJ
bracis-19036	324	31	permissions	permission	NOUN
bracis-19036	324	32	reprints	reprint	NOUN
bracis-19036	324	33	and	and	CCONJ
bracis-19036	324	34	permissions	permission	VERB
bracis-19036	324	35	copyright	copyright	NOUN
bracis-19036	324	36	information	information	NOUN
bracis-19036	324	37	©	©	PROPN
bracis-19036	324	38	2021	2021	NUM
bracis-19036	324	39	springer	springer	NOUN
bracis-19036	324	40	nature	nature	NOUN
bracis-19036	324	41	switzerland	switzerland	PROPN
bracis-19036	324	42	ag	ag	PROPN
bracis-19036	324	43	about	about	ADP
bracis-19036	324	44	this	this	DET
bracis-19036	324	45	paper	paper	NOUN
bracis-19036	324	46	cite	cite	VERB
bracis-19036	324	47	this	this	DET
bracis-19036	324	48	paper	paper	NOUN
bracis-19036	324	49	silva	silva	NOUN
bracis-19036	324	50	,	,	PUNCT
bracis-19036	324	51	j.e.h.d	j.e.h.d	PROPN
bracis-19036	324	52	.	.	PROPN
bracis-19036	324	53	,	,	PUNCT
bracis-19036	324	54	bernardino	bernardino	PROPN
bracis-19036	324	55	,	,	PUNCT
bracis-19036	324	56	h.s	h.s	PROPN
bracis-19036	324	57	.	.	PROPN
bracis-19036	324	58	,	,	PUNCT
bracis-19036	324	59	de	de	PROPN
bracis-19036	324	60	oliveira	oliveira	PROPN
bracis-19036	324	61	,	,	PUNCT
bracis-19036	324	62	i.l	i.l	PROPN
bracis-19036	324	63	.	.	PROPN
bracis-19036	324	64	,	,	PUNCT
bracis-19036	324	65	vieira	vieira	PROPN
bracis-19036	324	66	,	,	PUNCT
bracis-19036	324	67	a.b	a.b	PROPN
bracis-19036	324	68	.	.	PROPN
bracis-19036	324	69	,	,	PUNCT
bracis-19036	324	70	barbosa	barbosa	PROPN
bracis-19036	324	71	,	,	PUNCT
bracis-19036	324	72	h.j.c	h.j.c	NOUN
bracis-19036	324	73	.	.	PUNCT
bracis-19036	325	1	(	(	PUNCT
bracis-19036	325	2	2021	2021	NUM
bracis-19036	325	3	)	)	PUNCT
bracis-19036	325	4	.	.	PUNCT
bracis-19036	326	1	on	on	ADP
bracis-19036	326	2	the	the	DET
bracis-19036	326	3	 	 	SPACE
bracis-19036	326	4	analysis	analysis	NOUN
bracis-19036	326	5	of	of	ADP
bracis-19036	326	6	 	 	SPACE
bracis-19036	326	7	cgp	cgp	PROPN
bracis-19036	326	8	mutation	mutation	NOUN
bracis-19036	326	9	operators	operator	NOUN
bracis-19036	326	10	when	when	SCONJ
bracis-19036	326	11	inferring	infer	VERB
bracis-19036	326	12	gene	gene	NOUN
bracis-19036	326	13	regulatory	regulatory	ADJ
bracis-19036	326	14	networks	network	NOUN
bracis-19036	326	15	using	use	VERB
bracis-19036	326	16	scrna	scrna	NOUN
bracis-19036	326	17	-	-	PUNCT
bracis-19036	326	18	seq	seq	NOUN
bracis-19036	326	19	time	time	NOUN
bracis-19036	326	20	series	series	PROPN
bracis-19036	326	21	data	data	PROPN
bracis-19036	326	22	.	.	PUNCT
bracis-19036	327	1	in	in	ADP
bracis-19036	327	2	:	:	PUNCT
bracis-19036	327	3	britto	britto	PROPN
bracis-19036	327	4	,	,	PUNCT
bracis-19036	327	5	a.	a.	PROPN
bracis-19036	327	6	,	,	PUNCT
bracis-19036	327	7	valdivia	valdivia	PROPN
bracis-19036	327	8	delgado	delgado	PROPN
bracis-19036	327	9	,	,	PUNCT
bracis-19036	327	10	k.	k.	PROPN
bracis-19036	327	11	(	(	PUNCT
bracis-19036	327	12	eds	eds	PROPN
bracis-19036	327	13	)	)	PUNCT
bracis-19036	327	14	intelligent	intelligent	ADJ
bracis-19036	327	15	systems	system	NOUN
bracis-19036	327	16	.	.	PUNCT
bracis-19036	328	1	bracis	bracis	PROPN
bracis-19036	328	2	2021	2021	NUM
bracis-19036	328	3	.	.	PUNCT
bracis-19036	329	1	lecture	lecture	NOUN
bracis-19036	329	2	notes	note	NOUN
bracis-19036	329	3	in	in	ADP
bracis-19036	329	4	computer	computer	NOUN
bracis-19036	329	5	science	science	NOUN
bracis-19036	329	6	(	(	PUNCT
bracis-19036	329	7	)	)	PUNCT
bracis-19036	329	8	,	,	PUNCT
bracis-19036	329	9	vol	vol	NOUN
bracis-19036	329	10	13073	13073	NUM
bracis-19036	329	11	.	.	PUNCT
bracis-19036	330	1	springer	springer	NOUN
bracis-19036	330	2	,	,	PUNCT
bracis-19036	330	3	cham	cham	PROPN
bracis-19036	330	4	.	.	PUNCT
bracis-19036	331	1	https://doi.org/10.1007/978-3-030-91702-9_18	https://doi.org/10.1007/978-3-030-91702-9_18	PROPN
bracis-19036	331	2	download	download	NOUN
bracis-19036	331	3	citation	citation	NOUN
bracis-19036	331	4	.ris	.ris	PUNCT
bracis-19036	331	5	.enw	.enw	PROPN
bracis-19036	331	6	.bib	.bib	PUNCT
bracis-19036	332	1	doi	doi	PROPN
bracis-19036	332	2	:	:	PUNCT
bracis-19036	332	3	https://doi.org/10.1007/978-3-030-91702-9_18	https://doi.org/10.1007/978-3-030-91702-9_18	PROPN
bracis-19036	332	4	published	publish	VERB
bracis-19036	332	5	:	:	PUNCT
bracis-19036	332	6	28	28	NUM
bracis-19036	332	7	november	november	PROPN
bracis-19036	332	8	2021	2021	NUM
bracis-19036	332	9	publisher	publisher	NOUN
bracis-19036	332	10	name	name	NOUN
bracis-19036	332	11	:	:	PUNCT
bracis-19036	332	12	springer	springer	NOUN
bracis-19036	332	13	,	,	PUNCT
bracis-19036	332	14	cham	cham	PROPN
bracis-19036	332	15	print	print	PROPN
bracis-19036	332	16	isbn	isbn	PROPN
bracis-19036	332	17	:	:	PUNCT
bracis-19036	332	18	978	978	NUM
bracis-19036	332	19	-	-	SYM
bracis-19036	332	20	3	3	NUM
bracis-19036	332	21	-	-	PUNCT
bracis-19036	332	22	030	030	NUM
bracis-19036	332	23	-	-	PUNCT
bracis-19036	332	24	91701	91701	NUM
bracis-19036	332	25	-	-	SYM
bracis-19036	332	26	2	2	NUM
bracis-19036	332	27	online	online	ADJ
bracis-19036	332	28	isbn	isbn	NOUN
bracis-19036	332	29	:	:	PUNCT
bracis-19036	332	30	978	978	NUM
bracis-19036	332	31	-	-	SYM
bracis-19036	332	32	3	3	NUM
bracis-19036	332	33	-	-	PUNCT
bracis-19036	332	34	030	030	NUM
bracis-19036	332	35	-	-	PUNCT
bracis-19036	332	36	91702	91702	NUM
bracis-19036	332	37	-	-	SYM
bracis-19036	332	38	9	9	NUM
bracis-19036	332	39	ebook	ebook	NOUN
bracis-19036	332	40	packages	package	NOUN
bracis-19036	332	41	:	:	PUNCT
bracis-19036	332	42	computer	computer	NOUN
bracis-19036	332	43	sciencecomputer	sciencecomputer	NOUN
bracis-19036	332	44	science	science	NOUN
bracis-19036	332	45	(	(	PUNCT
bracis-19036	332	46	r0	r0	NOUN
bracis-19036	332	47	)	)	PUNCT
bracis-19036	332	48	share	share	VERB
bracis-19036	332	49	this	this	DET
bracis-19036	332	50	paper	paper	NOUN
bracis-19036	332	51	anyone	anyone	PRON
bracis-19036	332	52	you	you	PRON
bracis-19036	332	53	share	share	VERB
bracis-19036	332	54	the	the	DET
bracis-19036	332	55	following	follow	VERB
bracis-19036	332	56	link	link	NOUN
bracis-19036	332	57	with	with	ADP
bracis-19036	332	58	will	will	AUX
bracis-19036	332	59	be	be	AUX
bracis-19036	332	60	able	able	ADJ
bracis-19036	332	61	to	to	PART
bracis-19036	332	62	read	read	VERB
bracis-19036	332	63	this	this	DET
bracis-19036	332	64	content	content	NOUN
bracis-19036	332	65	:	:	PUNCT
bracis-19036	332	66	get	get	VERB
bracis-19036	332	67	shareable	shareable	ADJ
bracis-19036	332	68	linksorry	linksorry	NOUN
bracis-19036	332	69	,	,	PUNCT
bracis-19036	332	70	a	a	DET
bracis-19036	332	71	shareable	shareable	ADJ
bracis-19036	332	72	link	link	NOUN
bracis-19036	332	73	is	be	AUX
bracis-19036	332	74	not	not	PART
bracis-19036	332	75	currently	currently	ADV
bracis-19036	332	76	available	available	ADJ
bracis-19036	332	77	for	for	ADP
bracis-19036	332	78	this	this	DET
bracis-19036	332	79	article	article	NOUN
bracis-19036	332	80	.	.	PUNCT
bracis-19036	333	1	copy	copy	VERB
bracis-19036	333	2	shareable	shareable	ADJ
bracis-19036	333	3	link	link	NOUN
bracis-19036	333	4	to	to	PART
bracis-19036	333	5	clipboard	clipboard	NOUN
bracis-19036	333	6	provided	provide	VERB
bracis-19036	333	7	by	by	ADP
bracis-19036	333	8	the	the	DET
bracis-19036	333	9	springer	springer	NOUN
bracis-19036	333	10	nature	nature	PROPN
bracis-19036	333	11	sharedit	sharedit	PROPN
bracis-19036	333	12	content	content	NOUN
bracis-19036	333	13	-	-	PUNCT
bracis-19036	333	14	sharing	share	VERB
bracis-19036	333	15	initiative	initiative	NOUN
bracis-19036	333	16	publish	publish	VERB
bracis-19036	333	17	with	with	ADP
bracis-19036	333	18	us	us	PROPN
bracis-19036	333	19	policies	policy	NOUN
bracis-19036	333	20	and	and	CCONJ
bracis-19036	333	21	ethics	ethic	NOUN
bracis-19036	333	22	search	search	NOUN
bracis-19036	333	23	search	search	NOUN
bracis-19036	333	24	by	by	ADP
bracis-19036	333	25	keyword	keyword	NOUN
bracis-19036	333	26	or	or	CCONJ
bracis-19036	333	27	author	author	NOUN
bracis-19036	333	28	search	search	NOUN
bracis-19036	333	29	navigation	navigation	NOUN
bracis-19036	333	30	find	find	VERB
bracis-19036	333	31	a	a	DET
bracis-19036	333	32	journal	journal	NOUN
bracis-19036	333	33	publish	publish	VERB
bracis-19036	333	34	with	with	ADP
bracis-19036	333	35	us	we	PRON
bracis-19036	333	36	track	track	VERB
bracis-19036	333	37	your	your	PRON
bracis-19036	333	38	research	research	NOUN
bracis-19036	333	39	discover	discover	VERB
bracis-19036	333	40	content	content	NOUN
bracis-19036	333	41	journals	journal	NOUN
bracis-19036	333	42	a	a	DET
bracis-19036	333	43	-	-	PUNCT
bracis-19036	333	44	z	z	NOUN
bracis-19036	333	45	books	book	NOUN
bracis-19036	333	46	a	a	DET
bracis-19036	333	47	-	-	PUNCT
bracis-19036	333	48	z	z	NOUN
bracis-19036	333	49	publish	publish	NOUN
bracis-19036	333	50	with	with	ADP
bracis-19036	333	51	us	us	PROPN
bracis-19036	333	52	journal	journal	PROPN
bracis-19036	333	53	finder	finder	PROPN
bracis-19036	333	54	publish	publish	VERB
bracis-19036	333	55	your	your	PRON
bracis-19036	333	56	research	research	NOUN
bracis-19036	333	57	language	language	NOUN
bracis-19036	333	58	editing	edit	VERB
bracis-19036	333	59	open	open	ADJ
bracis-19036	333	60	access	access	NOUN
bracis-19036	333	61	publishing	publishing	NOUN
bracis-19036	333	62	products	product	NOUN
bracis-19036	333	63	and	and	CCONJ
bracis-19036	333	64	services	service	NOUN
bracis-19036	333	65	our	our	PRON
bracis-19036	333	66	products	product	NOUN
bracis-19036	333	67	librarians	librarian	VERB
bracis-19036	333	68	societies	society	NOUN
bracis-19036	333	69	partners	partner	NOUN
bracis-19036	333	70	and	and	CCONJ
bracis-19036	333	71	advertisers	advertiser	NOUN
bracis-19036	333	72	our	our	PRON
bracis-19036	333	73	brands	brand	NOUN
bracis-19036	333	74	springer	springer	NOUN
bracis-19036	333	75	nature	nature	PROPN
bracis-19036	333	76	portfolio	portfolio	PROPN
bracis-19036	333	77	bmc	bmc	PROPN
bracis-19036	333	78	palgrave	palgrave	PROPN
bracis-19036	333	79	macmillan	macmillan	PROPN
bracis-19036	333	80	apress	apress	PROPN
bracis-19036	333	81	discover	discover	VERB
bracis-19036	333	82	your	your	PRON
bracis-19036	333	83	privacy	privacy	NOUN
bracis-19036	333	84	choices	choice	NOUN
bracis-19036	333	85	/	/	SYM
bracis-19036	333	86	manage	manage	NOUN
bracis-19036	333	87	cookies	cookie	NOUN
bracis-19036	333	88	your	your	PRON
bracis-19036	333	89	us	us	PROPN
bracis-19036	334	1	state	state	NOUN
bracis-19036	334	2	privacy	privacy	NOUN
bracis-19036	334	3	rights	right	NOUN
bracis-19036	334	4	accessibility	accessibility	NOUN
bracis-19036	334	5	statement	statement	NOUN
bracis-19036	334	6	terms	term	NOUN
bracis-19036	334	7	and	and	CCONJ
bracis-19036	334	8	conditions	condition	NOUN
bracis-19036	334	9	privacy	privacy	NOUN
bracis-19036	334	10	policy	policy	NOUN
bracis-19036	334	11	help	help	NOUN
bracis-19036	334	12	and	and	CCONJ
bracis-19036	334	13	support	support	VERB
bracis-19036	334	14	legal	legal	ADJ
bracis-19036	334	15	notice	notice	NOUN
bracis-19036	334	16	cancel	cancel	VERB
bracis-19036	334	17	contracts	contract	NOUN
bracis-19036	334	18	here	here	ADV
bracis-19036	334	19	129.74.145.123	129.74.145.123	NUM
bracis-19036	334	20	hesburgh	hesburgh	PROPN
bracis-19036	334	21	library	library	PROPN
bracis-19036	334	22	er	er	INTJ
bracis-19036	334	23	unit	unit	NOUN
bracis-19036	334	24	(	(	PUNCT
bracis-19036	334	25	3005732405	3005732405	NUM
bracis-19036	334	26	)	)	PUNCT
bracis-19036	334	27	northeast	northeast	ADJ
bracis-19036	334	28	research	research	NOUN
bracis-19036	334	29	libraries	library	NOUN
bracis-19036	334	30	(	(	PUNCT
bracis-19036	334	31	nerl	nerl	PROPN
bracis-19036	334	32	)	)	PUNCT
bracis-19036	334	33	(	(	PUNCT
bracis-19036	334	34	8200828607	8200828607	NUM
bracis-19036	334	35	)	)	PUNCT
bracis-19036	334	36	nerl	nerl	VERB
bracis-19036	334	37	ta	ta	X
bracis-19036	334	38	account	account	NOUN
bracis-19036	334	39	(	(	PUNCT
bracis-19036	334	40	3006206169	3006206169	NUM
bracis-19036	334	41	)	)	PUNCT
bracis-19036	334	42	university	university	NOUN
bracis-19036	334	43	of	of	ADP
bracis-19036	334	44	notre	notre	PROPN
bracis-19036	334	45	dame	dame	PROPN
bracis-19036	334	46	hesburgh	hesburgh	PROPN
bracis-19036	334	47	library	library	NOUN
bracis-19036	334	48	(	(	PUNCT
bracis-19036	334	49	3000184373	3000184373	NUM
bracis-19036	334	50	)	)	PUNCT
bracis-19036	335	1	©	©	ADP
bracis-19036	335	2	2025	2025	NUM
bracis-19036	335	3	springer	springer	NOUN
bracis-19036	335	4	nature	nature	NOUN