id	sid	tid	token	lemma	pos
arestyrurj-208	1	1	aresty	aresty	PROPN
arestyrurj-208	1	2	rutgers	rutgers	PROPN
arestyrurj-208	1	3	undergraduate	undergraduate	PROPN
arestyrurj-208	1	4	research	research	PROPN
arestyrurj-208	1	5	journal	journal	PROPN
arestyrurj-208	1	6	,	,	PUNCT
arestyrurj-208	1	7	volume	volume	NOUN
arestyrurj-208	1	8	i	i	PRON
arestyrurj-208	1	9	,	,	PUNCT
arestyrurj-208	1	10	issue	issue	NOUN
arestyrurj-208	1	11	iv	iv	NUM
arestyrurj-208	1	12	differential	differential	ADJ
arestyrurj-208	1	13	gene	gene	NOUN
arestyrurj-208	1	14	expression	expression	NOUN
arestyrurj-208	1	15	analysis	analysis	NOUN
arestyrurj-208	1	16	and	and	CCONJ
arestyrurj-208	1	17	gene	gene	NOUN
arestyrurj-208	1	18	ontology	ontology	NOUN
arestyrurj-208	1	19	in	in	ADP
arestyrurj-208	1	20	triploid	triploid	ADJ
arestyrurj-208	1	21	and	and	CCONJ
arestyrurj-208	1	22	diploid	diploid	ADJ
arestyrurj-208	1	23	pocillopora	pocillopora	NOUN
arestyrurj-208	1	24	acuta	acuta	NOUN
arestyrurj-208	1	25	deeksha	deeksha	PROPN
arestyrurj-208	1	26	misri	misri	PROPN
arestyrurj-208	1	27	,	,	PUNCT
arestyrurj-208	1	28	erin	erin	PROPN
arestyrurj-208	1	29	e.	e.	PROPN
arestyrurj-208	1	30	chille	chille	PROPN
arestyrurj-208	1	31	,	,	PUNCT
arestyrurj-208	1	32	timothy	timothy	PROPN
arestyrurj-208	1	33	g.	g.	PROPN
arestyrurj-208	1	34	stephens	stephens	PROPN
arestyrurj-208	1	35	debashish	debashish	PROPN
arestyrurj-208	1	36	bhattacharya	bhattacharya	PROPN
arestyrurj-208	1	37	(	(	PUNCT
arestyrurj-208	1	38	faculty	faculty	NOUN
arestyrurj-208	1	39	advisor	advisor	NOUN
arestyrurj-208	1	40	)	)	PUNCT
arestyrurj-208	1	41	✵	✵	PROPN
arestyrurj-208	1	42	abstract	abstract	ADJ
arestyrurj-208	1	43	corals	coral	NOUN
arestyrurj-208	1	44	are	be	AUX
arestyrurj-208	1	45	marine	marine	ADJ
arestyrurj-208	1	46	invertebrates	invertebrate	NOUN
arestyrurj-208	1	47	that	that	PRON
arestyrurj-208	1	48	are	be	AUX
arestyrurj-208	1	49	facing	face	VERB
arestyrurj-208	1	50	life	life	NOUN
arestyrurj-208	1	51	-	-	PUNCT
arestyrurj-208	1	52	threatening	threaten	VERB
arestyrurj-208	1	53	environmental	environmental	ADJ
arestyrurj-208	1	54	stressors	stressor	NOUN
arestyrurj-208	1	55	due	due	ADJ
arestyrurj-208	1	56	to	to	ADP
arestyrurj-208	1	57	climate	climate	NOUN
arestyrurj-208	1	58	change	change	NOUN
arestyrurj-208	1	59	.	.	PUNCT
arestyrurj-208	2	1	polyploidy	polyploidy	ADJ
arestyrurj-208	2	2	can	can	AUX
arestyrurj-208	2	3	,	,	PUNCT
arestyrurj-208	2	4	in	in	ADP
arestyrurj-208	2	5	such	such	ADJ
arestyrurj-208	2	6	cases	case	NOUN
arestyrurj-208	2	7	,	,	PUNCT
arestyrurj-208	2	8	be	be	AUX
arestyrurj-208	2	9	an	an	DET
arestyrurj-208	2	10	important	important	ADJ
arestyrurj-208	2	11	source	source	NOUN
arestyrurj-208	2	12	of	of	ADP
arestyrurj-208	2	13	variation	variation	NOUN
arestyrurj-208	2	14	and	and	CCONJ
arestyrurj-208	2	15	adaptation	adaptation	NOUN
arestyrurj-208	2	16	in	in	ADP
arestyrurj-208	2	17	corals	coral	NOUN
arestyrurj-208	2	18	and	and	CCONJ
arestyrurj-208	2	19	other	other	ADJ
arestyrurj-208	2	20	species	specie	NOUN
arestyrurj-208	2	21	.	.	PUNCT
arestyrurj-208	3	1	polyploidy	polyploidy	ADJ
arestyrurj-208	3	2	is	be	AUX
arestyrurj-208	3	3	the	the	DET
arestyrurj-208	3	4	genomic	genomic	ADJ
arestyrurj-208	3	5	condition	condition	NOUN
arestyrurj-208	3	6	wherein	wherein	SCONJ
arestyrurj-208	3	7	the	the	DET
arestyrurj-208	3	8	cells	cell	NOUN
arestyrurj-208	3	9	of	of	ADP
arestyrurj-208	3	10	a	a	DET
arestyrurj-208	3	11	normally	normally	ADV
arestyrurj-208	3	12	diploid	diploid	ADJ
arestyrurj-208	3	13	organism	organism	NOUN
arestyrurj-208	3	14	have	have	VERB
arestyrurj-208	3	15	more	more	ADJ
arestyrurj-208	3	16	than	than	ADP
arestyrurj-208	3	17	one	one	NUM
arestyrurj-208	3	18	pair	pair	NOUN
arestyrurj-208	3	19	of	of	ADP
arestyrurj-208	3	20	chromosomes	chromosome	NOUN
arestyrurj-208	3	21	.	.	PUNCT
arestyrurj-208	4	1	pocillopora	pocillopora	NOUN
arestyrurj-208	4	2	acuta	acuta	NOUN
arestyrurj-208	4	3	,	,	PUNCT
arestyrurj-208	4	4	also	also	ADV
arestyrurj-208	4	5	known	know	VERB
arestyrurj-208	4	6	as	as	ADP
arestyrurj-208	4	7	the	the	DET
arestyrurj-208	4	8	cauliflower	cauliflower	NOUN
arestyrurj-208	4	9	coral	coral	NOUN
arestyrurj-208	4	10	,	,	PUNCT
arestyrurj-208	4	11	is	be	AUX
arestyrurj-208	4	12	a	a	DET
arestyrurj-208	4	13	brooding	brooding	ADJ
arestyrurj-208	4	14	coral	coral	NOUN
arestyrurj-208	4	15	that	that	PRON
arestyrurj-208	4	16	can	can	AUX
arestyrurj-208	4	17	also	also	ADV
arestyrurj-208	4	18	reproduce	reproduce	VERB
arestyrurj-208	4	19	asexually	asexually	ADV
arestyrurj-208	4	20	.	.	PUNCT
arestyrurj-208	5	1	it	it	PRON
arestyrurj-208	5	2	is	be	AUX
arestyrurj-208	5	3	a	a	DET
arestyrurj-208	5	4	stress	stress	NOUN
arestyrurj-208	5	5	-	-	PUNCT
arestyrurj-208	5	6	sensitive	sensitive	ADJ
arestyrurj-208	5	7	coral	coral	NOUN
arestyrurj-208	5	8	,	,	PUNCT
arestyrurj-208	5	9	which	which	PRON
arestyrurj-208	5	10	means	mean	VERB
arestyrurj-208	5	11	it	it	PRON
arestyrurj-208	5	12	shows	show	VERB
arestyrurj-208	5	13	clear	clear	ADJ
arestyrurj-208	5	14	physiological	physiological	ADJ
arestyrurj-208	5	15	changes	change	NOUN
arestyrurj-208	5	16	in	in	ADP
arestyrurj-208	5	17	response	response	NOUN
arestyrurj-208	5	18	to	to	ADP
arestyrurj-208	5	19	environmental	environmental	ADJ
arestyrurj-208	5	20	stressors	stressor	NOUN
arestyrurj-208	5	21	like	like	ADP
arestyrurj-208	5	22	temperature	temperature	NOUN
arestyrurj-208	5	23	,	,	PUNCT
arestyrurj-208	5	24	salinity	salinity	NOUN
arestyrurj-208	5	25	,	,	PUNCT
arestyrurj-208	5	26	and	and	CCONJ
arestyrurj-208	5	27	ph	ph	ADJ
arestyrurj-208	5	28	.	.	PROPN
arestyrurj-208	5	29	in	in	ADP
arestyrurj-208	5	30	this	this	DET
arestyrurj-208	5	31	study	study	NOUN
arestyrurj-208	5	32	,	,	PUNCT
arestyrurj-208	5	33	about	about	ADV
arestyrurj-208	5	34	60	60	NUM
arestyrurj-208	5	35	%	%	NOUN
arestyrurj-208	5	36	of	of	ADP
arestyrurj-208	5	37	the	the	DET
arestyrurj-208	5	38	stony	stony	PROPN
arestyrurj-208	5	39	coral	coral	ADJ
arestyrurj-208	5	40	pocillopora	pocillopora	PROPN
arestyrurj-208	5	41	acuta	acuta	NOUN
arestyrurj-208	5	42	samples	sample	NOUN
arestyrurj-208	5	43	collected	collect	VERB
arestyrurj-208	5	44	from	from	ADP
arestyrurj-208	5	45	kāneʻohe	kāneʻohe	PROPN
arestyrurj-208	5	46	bay	bay	PROPN
arestyrurj-208	5	47	,	,	PUNCT
arestyrurj-208	5	48	oahu	oahu	PROPN
arestyrurj-208	5	49	,	,	PUNCT
arestyrurj-208	5	50	hi	hi	INTJ
arestyrurj-208	5	51	,	,	PUNCT
arestyrurj-208	5	52	were	be	AUX
arestyrurj-208	5	53	triploid	triploid	ADJ
arestyrurj-208	5	54	.	.	PUNCT
arestyrurj-208	6	1	the	the	DET
arestyrurj-208	6	2	aim	aim	NOUN
arestyrurj-208	6	3	of	of	ADP
arestyrurj-208	6	4	this	this	DET
arestyrurj-208	6	5	study	study	NOUN
arestyrurj-208	6	6	was	be	AUX
arestyrurj-208	6	7	to	to	PART
arestyrurj-208	6	8	identify	identify	VERB
arestyrurj-208	6	9	the	the	DET
arestyrurj-208	6	10	differences	difference	NOUN
arestyrurj-208	6	11	in	in	ADP
arestyrurj-208	6	12	gene	gene	NOUN
arestyrurj-208	6	13	expression	expression	NOUN
arestyrurj-208	6	14	patterns	pattern	NOUN
arestyrurj-208	6	15	between	between	ADP
arestyrurj-208	6	16	triploid	triploid	ADJ
arestyrurj-208	6	17	cluster	cluster	NOUN
arestyrurj-208	6	18	1	1	NUM
arestyrurj-208	6	19	(	(	PUNCT
arestyrurj-208	6	20	t1	t1	NOUN
arestyrurj-208	6	21	)	)	PUNCT
arestyrurj-208	6	22	,	,	PUNCT
arestyrurj-208	6	23	triploid	triploid	NOUN
arestyrurj-208	6	24	cluster	cluster	NOUN
arestyrurj-208	6	25	2	2	NUM
arestyrurj-208	6	26	(	(	PUNCT
arestyrurj-208	6	27	t2	t2	NOUN
arestyrurj-208	6	28	)	)	PUNCT
arestyrurj-208	6	29	,	,	PUNCT
arestyrurj-208	6	30	and	and	CCONJ
arestyrurj-208	6	31	diploid	diploid	ADJ
arestyrurj-208	6	32	samples	sample	NOUN
arestyrurj-208	6	33	(	(	PUNCT
arestyrurj-208	6	34	d	d	NOUN
arestyrurj-208	6	35	)	)	PUNCT
arestyrurj-208	6	36	of	of	ADP
arestyrurj-208	6	37	p.	p.	PROPN
arestyrurj-208	6	38	acuta	acuta	NOUN
arestyrurj-208	6	39	.	.	PUNCT
arestyrurj-208	7	1	pairwise	pairwise	NOUN
arestyrurj-208	7	2	comparisons	comparison	NOUN
arestyrurj-208	7	3	were	be	AUX
arestyrurj-208	7	4	carried	carry	VERB
arestyrurj-208	7	5	out	out	ADP
arestyrurj-208	7	6	between	between	ADP
arestyrurj-208	7	7	all	all	DET
arestyrurj-208	7	8	categories	category	NOUN
arestyrurj-208	7	9	:	:	PUNCT
arestyrurj-208	8	1	t1	t1	NOUN
arestyrurj-208	8	2	vs.	vs.	X
arestyrurj-208	8	3	d	d	PROPN
arestyrurj-208	8	4	,	,	PUNCT
arestyrurj-208	8	5	t2	t2	NOUN
arestyrurj-208	8	6	vs.	vs.	X
arestyrurj-208	8	7	d	d	NOUN
arestyrurj-208	8	8	,	,	PUNCT
arestyrurj-208	8	9	and	and	CCONJ
arestyrurj-208	8	10	t1	t1	NOUN
arestyrurj-208	8	11	vs.	vs.	ADP
arestyrurj-208	8	12	t2	t2	NOUN
arestyrurj-208	8	13	.	.	PUNCT
arestyrurj-208	9	1	while	while	SCONJ
arestyrurj-208	9	2	there	there	PRON
arestyrurj-208	9	3	were	be	VERB
arestyrurj-208	9	4	a	a	DET
arestyrurj-208	9	5	large	large	ADJ
arestyrurj-208	9	6	number	number	NOUN
arestyrurj-208	9	7	of	of	ADP
arestyrurj-208	9	8	genes	gene	NOUN
arestyrurj-208	9	9	exhibiting	exhibit	VERB
arestyrurj-208	9	10	similar	similar	ADJ
arestyrurj-208	9	11	expression	expression	NOUN
arestyrurj-208	9	12	patterns	pattern	NOUN
arestyrurj-208	9	13	in	in	ADP
arestyrurj-208	9	14	both	both	DET
arestyrurj-208	9	15	triploid	triploid	ADJ
arestyrurj-208	9	16	clusters	cluster	NOUN
arestyrurj-208	9	17	,	,	PUNCT
arestyrurj-208	9	18	many	many	ADJ
arestyrurj-208	9	19	genes	gene	NOUN
arestyrurj-208	9	20	were	be	AUX
arestyrurj-208	9	21	differentially	differentially	ADV
arestyrurj-208	9	22	regulated	regulate	VERB
arestyrurj-208	9	23	in	in	ADP
arestyrurj-208	9	24	t1	t1	NOUN
arestyrurj-208	9	25	when	when	SCONJ
arestyrurj-208	9	26	compared	compare	VERB
arestyrurj-208	9	27	to	to	ADP
arestyrurj-208	9	28	t2	t2	NOUN
arestyrurj-208	9	29	.	.	PUNCT
arestyrurj-208	10	1	this	this	DET
arestyrurj-208	10	2	result	result	NOUN
arestyrurj-208	10	3	provides	provide	VERB
arestyrurj-208	10	4	evidence	evidence	NOUN
arestyrurj-208	10	5	suggesting	suggest	VERB
arestyrurj-208	10	6	that	that	SCONJ
arestyrurj-208	10	7	the	the	DET
arestyrurj-208	10	8	two	two	NUM
arestyrurj-208	10	9	triploid	triploid	ADJ
arestyrurj-208	10	10	lineages	lineage	NOUN
arestyrurj-208	10	11	originated	originate	VERB
arestyrurj-208	10	12	from	from	ADP
arestyrurj-208	10	13	separate	separate	ADJ
arestyrurj-208	10	14	triploidization	triploidization	NOUN
arestyrurj-208	10	15	events	event	NOUN
arestyrurj-208	10	16	in	in	ADP
arestyrurj-208	10	17	kāneʻohe	kāneʻohe	PROPN
arestyrurj-208	10	18	bay	bay	PROPN
arestyrurj-208	10	19	.	.	PUNCT
arestyrurj-208	11	1	the	the	DET
arestyrurj-208	11	2	differentially	differentially	ADV
arestyrurj-208	11	3	expressed	express	VERB
arestyrurj-208	11	4	genes	gene	NOUN
arestyrurj-208	11	5	shared	share	VERB
arestyrurj-208	11	6	between	between	ADP
arestyrurj-208	11	7	these	these	DET
arestyrurj-208	11	8	two	two	NUM
arestyrurj-208	11	9	triploid	triploid	ADJ
arestyrurj-208	11	10	lineages	lineage	NOUN
arestyrurj-208	11	11	,	,	PUNCT
arestyrurj-208	11	12	when	when	SCONJ
arestyrurj-208	11	13	compared	compare	VERB
arestyrurj-208	11	14	to	to	ADP
arestyrurj-208	11	15	the	the	DET
arestyrurj-208	11	16	diploid	diploid	ADJ
arestyrurj-208	11	17	coral	coral	ADJ
arestyrurj-208	11	18	lineage	lineage	NOUN
arestyrurj-208	11	19	,	,	PUNCT
arestyrurj-208	11	20	suggests	suggest	VERB
arestyrurj-208	11	21	changes	change	NOUN
arestyrurj-208	11	22	in	in	ADP
arestyrurj-208	11	23	cellular	cellular	ADJ
arestyrurj-208	11	24	physiology	physiology	NOUN
arestyrurj-208	11	25	as	as	ADP
arestyrurj-208	11	26	a	a	DET
arestyrurj-208	11	27	result	result	NOUN
arestyrurj-208	11	28	of	of	ADP
arestyrurj-208	11	29	polyploidization	polyploidization	NOUN
arestyrurj-208	11	30	.	.	PUNCT
arestyrurj-208	12	1	functional	functional	ADJ
arestyrurj-208	12	2	analysis	analysis	NOUN
arestyrurj-208	12	3	of	of	ADP
arestyrurj-208	12	4	the	the	DET
arestyrurj-208	12	5	p.	p.	NOUN
arestyrurj-208	12	6	acuta	acuta	NOUN
arestyrurj-208	12	7	genes	gene	NOUN
arestyrurj-208	12	8	can	can	AUX
arestyrurj-208	12	9	provide	provide	VERB
arestyrurj-208	12	10	deeper	deep	ADJ
arestyrurj-208	12	11	insight	insight	NOUN
arestyrurj-208	12	12	into	into	ADP
arestyrurj-208	12	13	the	the	DET
arestyrurj-208	12	14	specific	specific	ADJ
arestyrurj-208	12	15	,	,	PUNCT
arestyrurj-208	12	16	differentially	differentially	ADV
arestyrurj-208	12	17	regulated	regulate	VERB
arestyrurj-208	12	18	molecular	molecular	ADJ
arestyrurj-208	12	19	functions	function	NOUN
arestyrurj-208	12	20	and	and	CCONJ
arestyrurj-208	12	21	biological	biological	ADJ
arestyrurj-208	12	22	processes	process	NOUN
arestyrurj-208	12	23	in	in	ADP
arestyrurj-208	12	24	triploids	triploid	NOUN
arestyrurj-208	12	25	when	when	SCONJ
arestyrurj-208	12	26	compared	compare	VERB
arestyrurj-208	12	27	to	to	ADP
arestyrurj-208	12	28	diploid	diploid	ADJ
arestyrurj-208	12	29	p.	p.	NOUN
arestyrurj-208	12	30	acuta	acuta	NOUN
arestyrurj-208	12	31	.	.	PUNCT
arestyrurj-208	13	1	future	future	ADJ
arestyrurj-208	13	2	studies	study	NOUN
arestyrurj-208	13	3	involving	involve	VERB
arestyrurj-208	13	4	comparative	comparative	ADJ
arestyrurj-208	13	5	functional	functional	ADJ
arestyrurj-208	13	6	enrichment	enrichment	NOUN
arestyrurj-208	13	7	analysis	analysis	NOUN
arestyrurj-208	13	8	with	with	ADP
arestyrurj-208	13	9	more	more	ADJ
arestyrurj-208	13	10	triploid	triploid	ADJ
arestyrurj-208	13	11	and	and	CCONJ
arestyrurj-208	13	12	diploid	diploid	ADJ
arestyrurj-208	13	13	samples	sample	NOUN
arestyrurj-208	13	14	of	of	ADP
arestyrurj-208	13	15	p.	p.	NOUN
arestyrurj-208	13	16	acuta	acuta	NOUN
arestyrurj-208	13	17	will	will	AUX
arestyrurj-208	13	18	provide	provide	VERB
arestyrurj-208	13	19	more	more	ADJ
arestyrurj-208	13	20	insight	insight	NOUN
arestyrurj-208	13	21	into	into	ADP
arestyrurj-208	13	22	events	event	NOUN
arestyrurj-208	13	23	that	that	PRON
arestyrurj-208	13	24	caused	cause	VERB
arestyrurj-208	13	25	triploidization	triploidization	NOUN
arestyrurj-208	13	26	and	and	CCONJ
arestyrurj-208	13	27	the	the	DET
arestyrurj-208	13	28	coral	coral	NOUN
arestyrurj-208	13	29	’s	’s	PART
arestyrurj-208	13	30	response	response	NOUN
arestyrurj-208	13	31	to	to	ADP
arestyrurj-208	13	32	environmental	environmental	ADJ
arestyrurj-208	13	33	stressors	stressor	NOUN
arestyrurj-208	13	34	.	.	PUNCT
arestyrurj-208	14	1	key	key	ADJ
arestyrurj-208	14	2	terms	term	NOUN
arestyrurj-208	14	3	:	:	PUNCT
arestyrurj-208	14	4	corals	coral	NOUN
arestyrurj-208	14	5	,	,	PUNCT
arestyrurj-208	14	6	coral	coral	ADJ
arestyrurj-208	14	7	bleaching	bleaching	NOUN
arestyrurj-208	14	8	,	,	PUNCT
arestyrurj-208	14	9	polyploidy	polyploidy	ADJ
arestyrurj-208	14	10	,	,	PUNCT
arestyrurj-208	14	11	bioinformatics	bioinformatics	NOUN
arestyrurj-208	14	12	1	1	NUM
arestyrurj-208	14	13	introduction	introduction	NOUN
arestyrurj-208	14	14	polyploidy	polyploidy	NOUN
arestyrurj-208	14	15	is	be	AUX
arestyrurj-208	14	16	the	the	DET
arestyrurj-208	14	17	genomic	genomic	ADJ
arestyrurj-208	14	18	condition	condition	NOUN
arestyrurj-208	14	19	wherein	wherein	SCONJ
arestyrurj-208	14	20	an	an	DET
arestyrurj-208	14	21	organism	organism	NOUN
arestyrurj-208	14	22	possesses	possess	VERB
arestyrurj-208	14	23	multiple	multiple	ADJ
arestyrurj-208	14	24	chromosome	chromosome	NOUN
arestyrurj-208	14	25	copies	copy	NOUN
arestyrurj-208	14	26	.	.	PUNCT
arestyrurj-208	15	1	this	this	DET
arestyrurj-208	15	2	heritable	heritable	ADJ
arestyrurj-208	15	3	condition	condition	NOUN
arestyrurj-208	15	4	can	can	AUX
arestyrurj-208	15	5	be	be	AUX
arestyrurj-208	15	6	a	a	DET
arestyrurj-208	15	7	result	result	NOUN
arestyrurj-208	15	8	of	of	ADP
arestyrurj-208	15	9	genome	genome	NOUN
arestyrurj-208	15	10	duplication	duplication	NOUN
arestyrurj-208	15	11	within	within	ADP
arestyrurj-208	15	12	a	a	DET
arestyrurj-208	15	13	species	species	NOUN
arestyrurj-208	15	14	(	(	PUNCT
arestyrurj-208	15	15	autopolyploidy	autopolyploidy	NOUN
arestyrurj-208	15	16	)	)	PUNCT
arestyrurj-208	15	17	or	or	CCONJ
arestyrurj-208	15	18	from	from	ADP
arestyrurj-208	15	19	hybridization	hybridization	NOUN
arestyrurj-208	15	20	of	of	ADP
arestyrurj-208	15	21	two	two	NUM
arestyrurj-208	15	22	different	different	ADJ
arestyrurj-208	15	23	species	specie	NOUN
arestyrurj-208	15	24	(	(	PUNCT
arestyrurj-208	15	25	allopolyploidy	allopolyploidy	ADV
arestyrurj-208	15	26	)	)	PUNCT
arestyrurj-208	15	27	.	.	PUNCT
arestyrurj-208	16	1	polyploidy	polyploidy	ADJ
arestyrurj-208	16	2	in	in	ADP
arestyrurj-208	16	3	an	an	DET
arestyrurj-208	16	4	organism	organism	NOUN
arestyrurj-208	16	5	can	can	AUX
arestyrurj-208	16	6	cause	cause	VERB
arestyrurj-208	16	7	a	a	DET
arestyrurj-208	16	8	drastic	drastic	ADJ
arestyrurj-208	16	9	change	change	NOUN
arestyrurj-208	16	10	in	in	ADP
arestyrurj-208	16	11	cell	cell	NOUN
arestyrurj-208	16	12	organization	organization	NOUN
arestyrurj-208	16	13	and	and	CCONJ
arestyrurj-208	16	14	genome	genome	NOUN
arestyrurj-208	16	15	structure	structure	NOUN
arestyrurj-208	16	16	as	as	ADV
arestyrurj-208	16	17	well	well	ADV
arestyrurj-208	16	18	as	as	ADP
arestyrurj-208	16	19	problems	problem	NOUN
arestyrurj-208	16	20	in	in	ADP
arestyrurj-208	16	21	gene	gene	NOUN
arestyrurj-208	16	22	expression	expression	NOUN
arestyrurj-208	16	23	,	,	PUNCT
arestyrurj-208	16	24	genome	genome	NOUN
arestyrurj-208	16	25	stability	stability	NOUN
arestyrurj-208	16	26	,	,	PUNCT
arestyrurj-208	16	27	cell	cell	NOUN
arestyrurj-208	16	28	physiology	physiology	NOUN
arestyrurj-208	16	29	,	,	PUNCT
arestyrurj-208	16	30	and	and	CCONJ
arestyrurj-208	16	31	cell	cell	NOUN
arestyrurj-208	16	32	cycle	cycle	NOUN
arestyrurj-208	16	33	processes	process	NOUN
arestyrurj-208	16	34	(	(	PUNCT
arestyrurj-208	16	35	wertheim	wertheim	PROPN
arestyrurj-208	16	36	et	et	PROPN
arestyrurj-208	16	37	al	al	PROPN
arestyrurj-208	16	38	.	.	PROPN
arestyrurj-208	16	39	,	,	PUNCT
arestyrurj-208	16	40	2021	2021	NUM
arestyrurj-208	16	41	)	)	PUNCT
arestyrurj-208	16	42	.	.	PUNCT
arestyrurj-208	17	1	thus	thus	ADV
arestyrurj-208	17	2	,	,	PUNCT
arestyrurj-208	17	3	it	it	PRON
arestyrurj-208	17	4	can	can	AUX
arestyrurj-208	17	5	result	result	VERB
arestyrurj-208	17	6	in	in	ADP
arestyrurj-208	17	7	physiological	physiological	ADJ
arestyrurj-208	17	8	changes	change	NOUN
arestyrurj-208	17	9	in	in	ADP
arestyrurj-208	17	10	the	the	DET
arestyrurj-208	17	11	organism	organism	NOUN
arestyrurj-208	17	12	in	in	ADP
arestyrurj-208	17	13	response	response	NOUN
arestyrurj-208	17	14	to	to	ADP
arestyrurj-208	17	15	various	various	ADJ
arestyrurj-208	17	16	kinds	kind	NOUN
arestyrurj-208	17	17	of	of	ADP
arestyrurj-208	17	18	environmental	environmental	ADJ
arestyrurj-208	17	19	stressors	stressor	NOUN
arestyrurj-208	17	20	like	like	ADP
arestyrurj-208	17	21	salinity	salinity	NOUN
arestyrurj-208	17	22	stress	stress	NOUN
arestyrurj-208	17	23	,	,	PUNCT
arestyrurj-208	17	24	thermal	thermal	ADJ
arestyrurj-208	17	25	stress	stress	NOUN
arestyrurj-208	17	26	,	,	PUNCT
arestyrurj-208	17	27	and	and	CCONJ
arestyrurj-208	17	28	pco2	pco2	NOUN
arestyrurj-208	17	29	stress	stress	NOUN
arestyrurj-208	17	30	.	.	PUNCT
arestyrurj-208	18	1	polyploidy	polyploidy	ADJ
arestyrurj-208	18	2	is	be	AUX
arestyrurj-208	18	3	a	a	DET
arestyrurj-208	18	4	relatively	relatively	ADV
arestyrurj-208	18	5	common	common	ADJ
arestyrurj-208	18	6	occurrence	occurrence	NOUN
arestyrurj-208	18	7	in	in	ADP
arestyrurj-208	18	8	plants	plant	NOUN
arestyrurj-208	18	9	,	,	PUNCT
arestyrurj-208	18	10	and	and	CCONJ
arestyrurj-208	18	11	until	until	ADP
arestyrurj-208	18	12	recently	recently	ADV
arestyrurj-208	18	13	,	,	PUNCT
arestyrurj-208	18	14	was	be	AUX
arestyrurj-208	18	15	believed	believe	VERB
arestyrurj-208	18	16	to	to	PART
arestyrurj-208	18	17	be	be	AUX
arestyrurj-208	18	18	a	a	DET
arestyrurj-208	18	19	rare	rare	ADJ
arestyrurj-208	18	20	occurrence	occurrence	NOUN
arestyrurj-208	18	21	in	in	ADP
arestyrurj-208	18	22	animals	animal	NOUN
arestyrurj-208	18	23	(	(	PUNCT
arestyrurj-208	18	24	wertheim	wertheim	PROPN
arestyrurj-208	18	25	et	et	PROPN
arestyrurj-208	18	26	al	al	PROPN
arestyrurj-208	18	27	.	.	PROPN
arestyrurj-208	18	28	,	,	PUNCT
arestyrurj-208	18	29	2021	2021	NUM
arestyrurj-208	18	30	)	)	PUNCT
arestyrurj-208	18	31	.	.	PUNCT
arestyrurj-208	19	1	however	however	ADV
arestyrurj-208	19	2	,	,	PUNCT
arestyrurj-208	19	3	in	in	ADP
arestyrurj-208	19	4	recent	recent	ADJ
arestyrurj-208	19	5	years	year	NOUN
arestyrurj-208	19	6	,	,	PUNCT
arestyrurj-208	19	7	polyploidy	polyploidy	NOUN
arestyrurj-208	19	8	has	have	AUX
arestyrurj-208	19	9	been	be	AUX
arestyrurj-208	19	10	found	find	VERB
arestyrurj-208	19	11	in	in	ADP
arestyrurj-208	19	12	all	all	DET
arestyrurj-208	19	13	major	major	ADJ
arestyrurj-208	19	14	animal	animal	NOUN
arestyrurj-208	19	15	phyla	phyla	NOUN
arestyrurj-208	19	16	and	and	CCONJ
arestyrurj-208	19	17	occurs	occur	VERB
arestyrurj-208	19	18	relatively	relatively	ADV
arestyrurj-208	19	19	frequently	frequently	ADV
arestyrurj-208	19	20	in	in	ADP
arestyrurj-208	19	21	some	some	DET
arestyrurj-208	19	22	groups	group	NOUN
arestyrurj-208	19	23	,	,	PUNCT
arestyrurj-208	19	24	such	such	ADJ
arestyrurj-208	19	25	as	as	ADP
arestyrurj-208	19	26	fish	fish	NOUN
arestyrurj-208	19	27	and	and	CCONJ
arestyrurj-208	19	28	amphibians	amphibian	NOUN
arestyrurj-208	19	29	(	(	PUNCT
arestyrurj-208	19	30	wertheim	wertheim	PROPN
arestyrurj-208	19	31	et	et	PROPN
arestyrurj-208	19	32	al	al	PROPN
arestyrurj-208	19	33	.	.	PROPN
arestyrurj-208	19	34	,	,	PUNCT
arestyrurj-208	19	35	2021	2021	NUM
arestyrurj-208	19	36	)	)	PUNCT
arestyrurj-208	19	37	.	.	PUNCT
arestyrurj-208	20	1	in	in	ADP
arestyrurj-208	20	2	some	some	DET
arestyrurj-208	20	3	animals	animal	NOUN
arestyrurj-208	20	4	,	,	PUNCT
arestyrurj-208	20	5	triploidy	triploidy	NOUN
arestyrurj-208	20	6	may	may	AUX
arestyrurj-208	20	7	be	be	AUX
arestyrurj-208	20	8	beneficial	beneficial	ADJ
arestyrurj-208	20	9	to	to	ADP
arestyrurj-208	20	10	the	the	DET
arestyrurj-208	20	11	organism	organism	NOUN
arestyrurj-208	20	12	with	with	ADP
arestyrurj-208	20	13	respect	respect	NOUN
arestyrurj-208	20	14	to	to	ADP
arestyrurj-208	20	15	improved	improved	ADJ
arestyrurj-208	20	16	growth	growth	NOUN
arestyrurj-208	20	17	,	,	PUNCT
arestyrurj-208	20	18	pathogen	pathogen	NOUN
arestyrurj-208	20	19	resistance	resistance	NOUN
arestyrurj-208	20	20	,	,	PUNCT
arestyrurj-208	20	21	and	and	CCONJ
arestyrurj-208	20	22	creation	creation	NOUN
arestyrurj-208	20	23	of	of	ADP
arestyrurj-208	20	24	more	more	ADV
arestyrurj-208	20	25	fit	fit	ADJ
arestyrurj-208	20	26	genotypes	genotype	NOUN
arestyrurj-208	20	27	(	(	PUNCT
arestyrurj-208	20	28	kang	kang	PROPN
arestyrurj-208	20	29	et	et	PROPN
arestyrurj-208	20	30	al	al	PROPN
arestyrurj-208	20	31	.	.	PROPN
arestyrurj-208	20	32	,	,	PUNCT
arestyrurj-208	20	33	2004	2004	NUM
arestyrurj-208	20	34	)	)	PUNCT
arestyrurj-208	20	35	.	.	PUNCT
arestyrurj-208	21	1	coral	coral	ADJ
arestyrurj-208	21	2	reefs	reef	NOUN
arestyrurj-208	21	3	are	be	AUX
arestyrurj-208	21	4	large	large	ADJ
arestyrurj-208	21	5	marine	marine	ADJ
arestyrurj-208	21	6	ecosystems	ecosystem	NOUN
arestyrurj-208	21	7	formed	form	VERB
arestyrurj-208	21	8	by	by	ADP
arestyrurj-208	21	9	colonies	colony	NOUN
arestyrurj-208	21	10	of	of	ADP
arestyrurj-208	21	11	coral	coral	ADJ
arestyrurj-208	21	12	polyps	polyp	NOUN
arestyrurj-208	21	13	inhabited	inhabit	VERB
arestyrurj-208	21	14	by	by	ADP
arestyrurj-208	21	15	a	a	DET
arestyrurj-208	21	16	diverse	diverse	ADJ
arestyrurj-208	21	17	microbiome	microbiome	NOUN
arestyrurj-208	21	18	,	,	PUNCT
arestyrurj-208	21	19	including	include	VERB
arestyrurj-208	21	20	algal	algal	ADJ
arestyrurj-208	21	21	endosymbionts	endosymbiont	NOUN
arestyrurj-208	21	22	(	(	PUNCT
arestyrurj-208	21	23	symbiodiniaceae	symbiodiniaceae	PROPN
arestyrurj-208	21	24	)	)	PUNCT
arestyrurj-208	21	25	,	,	PUNCT
arestyrurj-208	21	26	bacteria	bacteria	NOUN
arestyrurj-208	21	27	,	,	PUNCT
arestyrurj-208	21	28	fungi	fungus	NOUN
arestyrurj-208	21	29	,	,	PUNCT
arestyrurj-208	21	30	archaea	archaea	ADJ
arestyrurj-208	21	31	,	,	PUNCT
arestyrurj-208	21	32	and	and	CCONJ
arestyrurj-208	21	33	viruses	virus	NOUN
arestyrurj-208	21	34	.	.	PUNCT
arestyrurj-208	22	1	due	due	ADP
arestyrurj-208	22	2	to	to	ADP
arestyrurj-208	22	3	climate	climate	NOUN
arestyrurj-208	22	4	change	change	NOUN
arestyrurj-208	22	5	,	,	PUNCT
arestyrurj-208	22	6	coral	coral	ADJ
arestyrurj-208	22	7	reefs	reef	NOUN
arestyrurj-208	22	8	are	be	AUX
arestyrurj-208	22	9	subjected	subject	VERB
arestyrurj-208	22	10	to	to	ADP
arestyrurj-208	22	11	acutely	acutely	ADV
arestyrurj-208	22	12	high	high	ADJ
arestyrurj-208	22	13	temperatures	temperature	NOUN
arestyrurj-208	22	14	that	that	PRON
arestyrurj-208	22	15	disrupt	disrupt	VERB
arestyrurj-208	22	16	the	the	DET
arestyrurj-208	22	17	coral	coral	ADJ
arestyrurj-208	22	18	-	-	PUNCT
arestyrurj-208	22	19	algal	algal	ADJ
arestyrurj-208	22	20	symbiosis	symbiosis	NOUN
arestyrurj-208	22	21	leading	lead	VERB
arestyrurj-208	22	22	to	to	ADP
arestyrurj-208	22	23	coral	coral	ADJ
arestyrurj-208	22	24	bleaching	bleach	VERB
arestyrurj-208	22	25	aresty	aresty	ADJ
arestyrurj-208	22	26	rutgers	rutgers	PROPN
arestyrurj-208	22	27	undergraduate	undergraduate	PROPN
arestyrurj-208	22	28	research	research	PROPN
arestyrurj-208	22	29	journal	journal	PROPN
arestyrurj-208	22	30	,	,	PUNCT
arestyrurj-208	22	31	volume	volume	NOUN
arestyrurj-208	22	32	i	i	PRON
arestyrurj-208	22	33	,	,	PUNCT
arestyrurj-208	22	34	issue	issue	NOUN
arestyrurj-208	22	35	iv	iv	NUM
arestyrurj-208	22	36	(	(	PUNCT
arestyrurj-208	22	37	williams	williams	PROPN
arestyrurj-208	22	38	et	et	PROPN
arestyrurj-208	22	39	al	al	PROPN
arestyrurj-208	22	40	.	.	PROPN
arestyrurj-208	22	41	,	,	PUNCT
arestyrurj-208	22	42	2021	2021	NUM
arestyrurj-208	22	43	)	)	PUNCT
arestyrurj-208	22	44	.	.	PUNCT
arestyrurj-208	23	1	when	when	SCONJ
arestyrurj-208	23	2	corals	coral	NOUN
arestyrurj-208	23	3	bleach	bleach	VERB
arestyrurj-208	23	4	,	,	PUNCT
arestyrurj-208	23	5	they	they	PRON
arestyrurj-208	23	6	expel	expel	VERB
arestyrurj-208	23	7	their	their	PRON
arestyrurj-208	23	8	symbionts	symbiont	NOUN
arestyrurj-208	23	9	,	,	PUNCT
arestyrurj-208	23	10	which	which	PRON
arestyrurj-208	23	11	provides	provide	VERB
arestyrurj-208	23	12	most	most	ADJ
arestyrurj-208	23	13	of	of	ADP
arestyrurj-208	23	14	thecarbohydrates	thecarbohydrate	NOUN
arestyrurj-208	23	15	,	,	PUNCT
arestyrurj-208	23	16	lipids	lipids	ADJ
arestyrurj-208	23	17	,	,	PUNCT
arestyrurj-208	23	18	amino	amino	NOUN
arestyrurj-208	23	19	acids	acid	NOUN
arestyrurj-208	23	20	,	,	PUNCT
arestyrurj-208	23	21	and	and	CCONJ
arestyrurj-208	23	22	o2	o2	PROPN
arestyrurj-208	23	23	that	that	PRON
arestyrurj-208	23	24	fulfill	fulfill	VERB
arestyrurj-208	23	25	the	the	DET
arestyrurj-208	23	26	host	host	NOUN
arestyrurj-208	23	27	’s	’s	PART
arestyrurj-208	23	28	energy	energy	NOUN
arestyrurj-208	23	29	requirements	requirement	NOUN
arestyrurj-208	23	30	.	.	PUNCT
arestyrurj-208	24	1	extended	extend	VERB
arestyrurj-208	24	2	periods	period	NOUN
arestyrurj-208	24	3	of	of	ADP
arestyrurj-208	24	4	bleaching	bleaching	NOUN
arestyrurj-208	24	5	,	,	PUNCT
arestyrurj-208	24	6	which	which	PRON
arestyrurj-208	24	7	cause	cause	VERB
arestyrurj-208	24	8	compromised	compromise	VERB
arestyrurj-208	24	9	immunity	immunity	NOUN
arestyrurj-208	24	10	and	and	CCONJ
arestyrurj-208	24	11	starvation	starvation	NOUN
arestyrurj-208	24	12	,	,	PUNCT
arestyrurj-208	24	13	are	be	AUX
arestyrurj-208	24	14	a	a	DET
arestyrurj-208	24	15	leading	lead	VERB
arestyrurj-208	24	16	cause	cause	NOUN
arestyrurj-208	24	17	of	of	ADP
arestyrurj-208	24	18	the	the	DET
arestyrurj-208	24	19	mass	mass	ADJ
arestyrurj-208	24	20	mortality	mortality	NOUN
arestyrurj-208	24	21	of	of	ADP
arestyrurj-208	24	22	coral	coral	ADJ
arestyrurj-208	24	23	reefs	reef	NOUN
arestyrurj-208	24	24	globally	globally	ADV
arestyrurj-208	24	25	(	(	PUNCT
arestyrurj-208	24	26	williams	williams	PROPN
arestyrurj-208	24	27	et	et	PROPN
arestyrurj-208	24	28	al	al	PROPN
arestyrurj-208	24	29	.	.	PROPN
arestyrurj-208	24	30	,	,	PUNCT
arestyrurj-208	24	31	2021	2021	NUM
arestyrurj-208	24	32	)	)	PUNCT
arestyrurj-208	24	33	.	.	PUNCT
arestyrurj-208	25	1	corals	coral	NOUN
arestyrurj-208	25	2	need	need	VERB
arestyrurj-208	25	3	effective	effective	ADJ
arestyrurj-208	25	4	and	and	CCONJ
arestyrurj-208	25	5	efficient	efficient	ADJ
arestyrurj-208	25	6	mechanisms	mechanism	NOUN
arestyrurj-208	25	7	to	to	PART
arestyrurj-208	25	8	adapt	adapt	VERB
arestyrurj-208	25	9	and	and	CCONJ
arestyrurj-208	25	10	ensure	ensure	VERB
arestyrurj-208	25	11	their	their	PRON
arestyrurj-208	25	12	survival	survival	NOUN
arestyrurj-208	25	13	against	against	ADP
arestyrurj-208	25	14	environmental	environmental	ADJ
arestyrurj-208	25	15	stressors	stressor	NOUN
arestyrurj-208	25	16	such	such	ADJ
arestyrurj-208	25	17	as	as	ADP
arestyrurj-208	25	18	prolonged	prolonged	ADJ
arestyrurj-208	25	19	heat	heat	NOUN
arestyrurj-208	25	20	and	and	CCONJ
arestyrurj-208	25	21	oxidative	oxidative	ADJ
arestyrurj-208	25	22	stress	stress	NOUN
arestyrurj-208	25	23	.	.	PUNCT
arestyrurj-208	26	1	hawai’i	hawai’i	NOUN
arestyrurj-208	26	2	houses	house	NOUN
arestyrurj-208	26	3	about	about	ADV
arestyrurj-208	26	4	80	80	NUM
arestyrurj-208	26	5	species	specie	NOUN
arestyrurj-208	26	6	of	of	ADP
arestyrurj-208	26	7	scleractinia	scleractinia	NOUN
arestyrurj-208	26	8	corals	coral	NOUN
arestyrurj-208	26	9	,	,	PUNCT
arestyrurj-208	26	10	and	and	CCONJ
arestyrurj-208	26	11	the	the	DET
arestyrurj-208	26	12	islands	island	NOUN
arestyrurj-208	26	13	are	be	AUX
arestyrurj-208	26	14	the	the	DET
arestyrurj-208	26	15	world	world	NOUN
arestyrurj-208	26	16	’s	’s	PART
arestyrurj-208	26	17	most	most	ADV
arestyrurj-208	26	18	isolated	isolate	VERB
arestyrurj-208	26	19	archipelago	archipelago	NOUN
arestyrurj-208	26	20	,	,	PUNCT
arestyrurj-208	26	21	geographically	geographically	ADV
arestyrurj-208	26	22	isolated	isolate	VERB
arestyrurj-208	26	23	from	from	ADP
arestyrurj-208	26	24	other	other	ADJ
arestyrurj-208	26	25	reef	reef	ADJ
arestyrurj-208	26	26	systems	system	NOUN
arestyrurj-208	26	27	.	.	PUNCT
arestyrurj-208	27	1	this	this	DET
arestyrurj-208	27	2	reef	reef	ADJ
arestyrurj-208	27	3	system	system	NOUN
arestyrurj-208	27	4	thus	thus	ADV
arestyrurj-208	27	5	provides	provide	VERB
arestyrurj-208	27	6	an	an	DET
arestyrurj-208	27	7	ideal	ideal	ADJ
arestyrurj-208	27	8	platform	platform	NOUN
arestyrurj-208	27	9	for	for	ADP
arestyrurj-208	27	10	advancing	advance	VERB
arestyrurj-208	27	11	coral	coral	ADJ
arestyrurj-208	27	12	biology	biology	NOUN
arestyrurj-208	27	13	and	and	CCONJ
arestyrurj-208	27	14	conservation	conservation	NOUN
arestyrurj-208	27	15	using	use	VERB
arestyrurj-208	27	16	multi	multi	NOUN
arestyrurj-208	27	17	-	-	ADJ
arestyrurj-208	27	18	omics	omics	ADJ
arestyrurj-208	27	19	and	and	CCONJ
arestyrurj-208	27	20	genetic	genetic	ADJ
arestyrurj-208	27	21	tools	tool	NOUN
arestyrurj-208	27	22	.	.	PUNCT
arestyrurj-208	28	1	(	(	PUNCT
arestyrurj-208	28	2	bhattacharya	bhattacharya	PROPN
arestyrurj-208	28	3	et	et	PROPN
arestyrurj-208	28	4	al	al	PROPN
arestyrurj-208	28	5	.	.	PROPN
arestyrurj-208	28	6	,	,	PUNCT
arestyrurj-208	28	7	2022	2022	NUM
arestyrurj-208	28	8	)	)	PUNCT
arestyrurj-208	28	9	.	.	PUNCT
arestyrurj-208	29	1	to	to	PART
arestyrurj-208	29	2	study	study	VERB
arestyrurj-208	29	3	the	the	DET
arestyrurj-208	29	4	stress	stress	NOUN
arestyrurj-208	29	5	response	response	NOUN
arestyrurj-208	29	6	of	of	ADP
arestyrurj-208	29	7	the	the	DET
arestyrurj-208	29	8	stony	stony	PROPN
arestyrurj-208	29	9	coral	coral	ADJ
arestyrurj-208	29	10	pocillopora	pocillopora	NOUN
arestyrurj-208	29	11	acuta	acuta	NOUN
arestyrurj-208	29	12	(	(	PUNCT
arestyrurj-208	29	13	also	also	ADV
arestyrurj-208	29	14	known	know	VERB
arestyrurj-208	29	15	as	as	ADP
arestyrurj-208	29	16	the	the	DET
arestyrurj-208	29	17	cauliflower	cauliflower	NOUN
arestyrurj-208	29	18	coral	coral	NOUN
arestyrurj-208	29	19	)	)	PUNCT
arestyrurj-208	29	20	,	,	PUNCT
arestyrurj-208	29	21	30	30	NUM
arestyrurj-208	29	22	samples	sample	NOUN
arestyrurj-208	29	23	of	of	ADP
arestyrurj-208	29	24	the	the	DET
arestyrurj-208	29	25	species	specie	NOUN
arestyrurj-208	29	26	were	be	AUX
arestyrurj-208	29	27	collected	collect	VERB
arestyrurj-208	29	28	in	in	ADP
arestyrurj-208	29	29	2018	2018	NUM
arestyrurj-208	29	30	from	from	ADP
arestyrurj-208	29	31	kāneʻohe	kāneʻohe	PROPN
arestyrurj-208	29	32	bay	bay	PROPN
arestyrurj-208	29	33	in	in	ADP
arestyrurj-208	29	34	hawai’i	hawai’i	NOUN
arestyrurj-208	29	35	and	and	CCONJ
arestyrurj-208	29	36	exposed	expose	VERB
arestyrurj-208	29	37	to	to	ADP
arestyrurj-208	29	38	ambient	ambient	ADJ
arestyrurj-208	29	39	temperature	temperature	NOUN
arestyrurj-208	29	40	and	and	CCONJ
arestyrurj-208	29	41	ambient	ambient	ADJ
arestyrurj-208	29	42	co2	co2	NOUN
arestyrurj-208	29	43	.	.	PUNCT
arestyrurj-208	30	1	from	from	ADP
arestyrurj-208	30	2	these	these	DET
arestyrurj-208	30	3	samples	sample	NOUN
arestyrurj-208	30	4	,	,	PUNCT
arestyrurj-208	30	5	about	about	ADV
arestyrurj-208	30	6	60	60	NUM
arestyrurj-208	30	7	%	%	NOUN
arestyrurj-208	30	8	of	of	ADP
arestyrurj-208	30	9	the	the	DET
arestyrurj-208	30	10	samples	sample	NOUN
arestyrurj-208	30	11	were	be	AUX
arestyrurj-208	30	12	triploid	triploid	ADJ
arestyrurj-208	30	13	.	.	PUNCT
arestyrurj-208	31	1	while	while	SCONJ
arestyrurj-208	31	2	the	the	DET
arestyrurj-208	31	3	origin	origin	NOUN
arestyrurj-208	31	4	of	of	ADP
arestyrurj-208	31	5	triploidy	triploidy	NOUN
arestyrurj-208	31	6	in	in	ADP
arestyrurj-208	31	7	this	this	DET
arestyrurj-208	31	8	population	population	NOUN
arestyrurj-208	31	9	is	be	AUX
arestyrurj-208	31	10	still	still	ADV
arestyrurj-208	31	11	unknown	unknown	ADJ
arestyrurj-208	31	12	,	,	PUNCT
arestyrurj-208	31	13	there	there	PRON
arestyrurj-208	31	14	are	be	VERB
arestyrurj-208	31	15	currently	currently	ADV
arestyrurj-208	31	16	three	three	NUM
arestyrurj-208	31	17	mechanistic	mechanistic	ADJ
arestyrurj-208	31	18	explanations	explanation	NOUN
arestyrurj-208	31	19	for	for	ADP
arestyrurj-208	31	20	the	the	DET
arestyrurj-208	31	21	origin	origin	NOUN
arestyrurj-208	31	22	of	of	ADP
arestyrurj-208	31	23	triploidy	triploidy	NOUN
arestyrurj-208	31	24	within	within	ADP
arestyrurj-208	31	25	this	this	DET
arestyrurj-208	31	26	population	population	NOUN
arestyrurj-208	31	27	,	,	PUNCT
arestyrurj-208	31	28	including	include	VERB
arestyrurj-208	31	29	1	1	NUM
arestyrurj-208	31	30	)	)	PUNCT
arestyrurj-208	31	31	self	self	NOUN
arestyrurj-208	31	32	-	-	PUNCT
arestyrurj-208	31	33	fertilization	fertilization	NOUN
arestyrurj-208	31	34	of	of	ADP
arestyrurj-208	31	35	a	a	DET
arestyrurj-208	31	36	p.	p.	NOUN
arestyrurj-208	31	37	acuta	acuta	NOUN
arestyrurj-208	31	38	egg	egg	NOUN
arestyrurj-208	31	39	followed	follow	VERB
arestyrurj-208	31	40	by	by	ADP
arestyrurj-208	31	41	fertilization	fertilization	NOUN
arestyrurj-208	31	42	by	by	ADP
arestyrurj-208	31	43	a	a	DET
arestyrurj-208	31	44	foreign	foreign	ADJ
arestyrurj-208	31	45	sperm	sperm	NOUN
arestyrurj-208	31	46	,	,	PUNCT
arestyrurj-208	31	47	2	2	NUM
arestyrurj-208	31	48	)	)	PUNCT
arestyrurj-208	31	49	diploidization	diploidization	NOUN
arestyrurj-208	31	50	of	of	ADP
arestyrurj-208	31	51	one	one	NUM
arestyrurj-208	31	52	of	of	ADP
arestyrurj-208	31	53	the	the	DET
arestyrurj-208	31	54	two	two	NUM
arestyrurj-208	31	55	parental	parental	ADJ
arestyrurj-208	31	56	gametes	gamete	NOUN
arestyrurj-208	31	57	,	,	PUNCT
arestyrurj-208	31	58	and	and	CCONJ
arestyrurj-208	31	59	3	3	X
arestyrurj-208	31	60	)	)	PUNCT
arestyrurj-208	31	61	failure	failure	NOUN
arestyrurj-208	31	62	of	of	ADP
arestyrurj-208	31	63	the	the	DET
arestyrurj-208	31	64	ovum	ovum	NOUN
arestyrurj-208	31	65	to	to	PART
arestyrurj-208	31	66	expel	expel	VERB
arestyrurj-208	31	67	the	the	DET
arestyrurj-208	31	68	second	second	ADJ
arestyrurj-208	31	69	polar	polar	ADJ
arestyrurj-208	31	70	body	body	NOUN
arestyrurj-208	31	71	(	(	PUNCT
arestyrurj-208	31	72	stephens	stephens	PROPN
arestyrurj-208	31	73	et	et	PROPN
arestyrurj-208	31	74	al	al	PROPN
arestyrurj-208	31	75	.	.	PROPN
arestyrurj-208	31	76	,	,	PUNCT
arestyrurj-208	31	77	2021	2021	NUM
arestyrurj-208	31	78	)	)	PUNCT
arestyrurj-208	31	79	.	.	PUNCT
arestyrurj-208	32	1	it	it	PRON
arestyrurj-208	32	2	is	be	AUX
arestyrurj-208	32	3	also	also	ADV
arestyrurj-208	32	4	hypothesized	hypothesize	VERB
arestyrurj-208	32	5	that	that	SCONJ
arestyrurj-208	32	6	triploid	triploid	ADJ
arestyrurj-208	32	7	genotypes	genotype	NOUN
arestyrurj-208	32	8	may	may	AUX
arestyrurj-208	32	9	have	have	AUX
arestyrurj-208	32	10	spread	spread	VERB
arestyrurj-208	32	11	throughout	throughout	ADP
arestyrurj-208	32	12	kāneʻohe	kāneʻohe	NOUN
arestyrurj-208	32	13	bay	bay	NOUN
arestyrurj-208	32	14	by	by	ADP
arestyrurj-208	32	15	the	the	DET
arestyrurj-208	32	16	generation	generation	NOUN
arestyrurj-208	32	17	of	of	ADP
arestyrurj-208	32	18	asexual	asexual	ADJ
arestyrurj-208	32	19	brooded	brood	VERB
arestyrurj-208	32	20	larvae	larvae	NOUN
arestyrurj-208	32	21	,	,	PUNCT
arestyrurj-208	32	22	(	(	PUNCT
arestyrurj-208	32	23	nakajima	nakajima	PROPN
arestyrurj-208	32	24	et	et	PROPN
arestyrurj-208	32	25	al	al	PROPN
arestyrurj-208	32	26	.	.	PROPN
arestyrurj-208	32	27	,	,	PUNCT
arestyrurj-208	32	28	2018	2018	NUM
arestyrurj-208	32	29	)	)	PUNCT
arestyrurj-208	32	30	,	,	PUNCT
arestyrurj-208	32	31	and	and	CCONJ
arestyrurj-208	32	32	clonal	clonal	ADJ
arestyrurj-208	32	33	propagation	propagation	NOUN
arestyrurj-208	32	34	through	through	ADP
arestyrurj-208	32	35	colony	colony	NOUN
arestyrurj-208	32	36	fragmentation	fragmentation	NOUN
arestyrurj-208	32	37	(	(	PUNCT
arestyrurj-208	32	38	highsmith	highsmith	NOUN
arestyrurj-208	32	39	,	,	PUNCT
arestyrurj-208	32	40	1982	1982	NUM
arestyrurj-208	32	41	)	)	PUNCT
arestyrurj-208	32	42	.	.	PUNCT
arestyrurj-208	33	1	because	because	SCONJ
arestyrurj-208	33	2	this	this	PRON
arestyrurj-208	33	3	is	be	AUX
arestyrurj-208	33	4	the	the	DET
arestyrurj-208	33	5	first	first	ADJ
arestyrurj-208	33	6	known	know	VERB
arestyrurj-208	33	7	incidence	incidence	NOUN
arestyrurj-208	33	8	of	of	ADP
arestyrurj-208	33	9	widespread	widespread	ADJ
arestyrurj-208	33	10	triploidy	triploidy	NOUN
arestyrurj-208	33	11	in	in	ADP
arestyrurj-208	33	12	a	a	DET
arestyrurj-208	33	13	coral	coral	ADJ
arestyrurj-208	33	14	population	population	NOUN
arestyrurj-208	33	15	,	,	PUNCT
arestyrurj-208	33	16	we	we	PRON
arestyrurj-208	33	17	aimed	aim	VERB
arestyrurj-208	33	18	to	to	PART
arestyrurj-208	33	19	gain	gain	VERB
arestyrurj-208	33	20	baseline	baseline	ADJ
arestyrurj-208	33	21	information	information	NOUN
arestyrurj-208	33	22	about	about	ADP
arestyrurj-208	33	23	gene	gene	NOUN
arestyrurj-208	33	24	expression	expression	NOUN
arestyrurj-208	33	25	regulation	regulation	NOUN
arestyrurj-208	33	26	and	and	CCONJ
arestyrurj-208	33	27	differential	differential	ADJ
arestyrurj-208	33	28	gene	gene	NOUN
arestyrurj-208	33	29	expression	expression	NOUN
arestyrurj-208	33	30	between	between	ADP
arestyrurj-208	33	31	diploid	diploid	ADJ
arestyrurj-208	33	32	and	and	CCONJ
arestyrurj-208	33	33	triploid	triploid	ADJ
arestyrurj-208	33	34	p.	p.	NOUN
arestyrurj-208	33	35	acuta	acuta	NOUN
arestyrurj-208	33	36	corals	coral	NOUN
arestyrurj-208	33	37	in	in	ADP
arestyrurj-208	33	38	the	the	DET
arestyrurj-208	33	39	kāneʻohe	kāneʻohe	PROPN
arestyrurj-208	33	40	bay	bay	PROPN
arestyrurj-208	33	41	ecosystem	ecosystem	PROPN
arestyrurj-208	33	42	(	(	PUNCT
arestyrurj-208	33	43	stephens	stephens	PROPN
arestyrurj-208	33	44	et	et	PROPN
arestyrurj-208	33	45	al	al	PROPN
arestyrurj-208	33	46	.	.	PROPN
arestyrurj-208	33	47	,	,	PUNCT
arestyrurj-208	33	48	2021	2021	NUM
arestyrurj-208	33	49	)	)	PUNCT
arestyrurj-208	33	50	.	.	PUNCT
arestyrurj-208	34	1	in	in	ADP
arestyrurj-208	34	2	the	the	DET
arestyrurj-208	34	3	study	study	NOUN
arestyrurj-208	34	4	conducted	conduct	VERB
arestyrurj-208	34	5	by	by	ADP
arestyrurj-208	34	6	stephens	stephen	NOUN
arestyrurj-208	34	7	et	et	PROPN
arestyrurj-208	34	8	al	al	PROPN
arestyrurj-208	34	9	.	.	PROPN
arestyrurj-208	34	10	,	,	PUNCT
arestyrurj-208	34	11	an	an	DET
arestyrurj-208	34	12	unrooted	unrooted	ADJ
arestyrurj-208	34	13	phylogenetic	phylogenetic	ADJ
arestyrurj-208	34	14	tree	tree	NOUN
arestyrurj-208	34	15	built	build	VERB
arestyrurj-208	34	16	using	use	VERB
arestyrurj-208	34	17	the	the	DET
arestyrurj-208	34	18	snps	snps	PROPN
arestyrurj-208	34	19	identified	identify	VERB
arestyrurj-208	34	20	in	in	ADP
arestyrurj-208	34	21	p.	p.	PROPN
arestyrurj-208	34	22	acuta	acuta	NOUN
arestyrurj-208	34	23	rna	rna	PROPN
arestyrurj-208	34	24	-	-	PUNCT
arestyrurj-208	34	25	seq	seq	NOUN
arestyrurj-208	34	26	data	datum	NOUN
arestyrurj-208	34	27	showed	show	VERB
arestyrurj-208	34	28	a	a	DET
arestyrurj-208	34	29	putative	putative	ADJ
arestyrurj-208	34	30	split	split	NOUN
arestyrurj-208	34	31	between	between	ADP
arestyrurj-208	34	32	diploid	diploid	ADJ
arestyrurj-208	34	33	and	and	CCONJ
arestyrurj-208	34	34	triploid	triploid	ADJ
arestyrurj-208	34	35	lineages	lineage	NOUN
arestyrurj-208	34	36	.	.	PUNCT
arestyrurj-208	35	1	there	there	PRON
arestyrurj-208	35	2	were	be	VERB
arestyrurj-208	35	3	two	two	NUM
arestyrurj-208	35	4	triploid	triploid	ADJ
arestyrurj-208	35	5	lineages	lineage	NOUN
arestyrurj-208	35	6	identified	identify	VERB
arestyrurj-208	35	7	,	,	PUNCT
arestyrurj-208	35	8	named	name	VERB
arestyrurj-208	35	9	triploid	triploid	NOUN
arestyrurj-208	35	10	cluster	cluster	NOUN
arestyrurj-208	35	11	1	1	NUM
arestyrurj-208	35	12	(	(	PUNCT
arestyrurj-208	35	13	t1	t1	NOUN
arestyrurj-208	35	14	)	)	PUNCT
arestyrurj-208	35	15	and	and	CCONJ
arestyrurj-208	35	16	triploid	triploid	NUM
arestyrurj-208	35	17	cluster	cluster	NOUN
arestyrurj-208	35	18	2	2	NUM
arestyrurj-208	35	19	(	(	PUNCT
arestyrurj-208	35	20	t2	t2	NOUN
arestyrurj-208	35	21	)	)	PUNCT
arestyrurj-208	35	22	.	.	PUNCT
arestyrurj-208	36	1	we	we	PRON
arestyrurj-208	36	2	studied	study	VERB
arestyrurj-208	36	3	the	the	DET
arestyrurj-208	36	4	differences	difference	NOUN
arestyrurj-208	36	5	in	in	ADP
arestyrurj-208	36	6	gene	gene	NOUN
arestyrurj-208	36	7	expression	expression	NOUN
arestyrurj-208	36	8	between	between	ADP
arestyrurj-208	36	9	the	the	DET
arestyrurj-208	36	10	two	two	NUM
arestyrurj-208	36	11	triploid	triploid	ADJ
arestyrurj-208	36	12	clades	clade	NOUN
arestyrurj-208	36	13	(	(	PUNCT
arestyrurj-208	36	14	t1	t1	NOUN
arestyrurj-208	36	15	and	and	CCONJ
arestyrurj-208	36	16	t2	t2	NOUN
arestyrurj-208	36	17	)	)	PUNCT
arestyrurj-208	36	18	and	and	CCONJ
arestyrurj-208	36	19	the	the	DET
arestyrurj-208	36	20	diploid	diploid	ADJ
arestyrurj-208	36	21	clade	clade	NOUN
arestyrurj-208	36	22	(	(	PUNCT
arestyrurj-208	36	23	d	d	NOUN
arestyrurj-208	36	24	)	)	PUNCT
arestyrurj-208	36	25	p.	p.	NOUN
arestyrurj-208	36	26	acuta	acuta	NOUN
arestyrurj-208	36	27	.	.	PUNCT
arestyrurj-208	37	1	gene	gene	NOUN
arestyrurj-208	37	2	expression	expression	NOUN
arestyrurj-208	37	3	in	in	ADP
arestyrurj-208	37	4	an	an	DET
arestyrurj-208	37	5	organism	organism	NOUN
arestyrurj-208	37	6	can	can	AUX
arestyrurj-208	37	7	be	be	AUX
arestyrurj-208	37	8	measured	measure	VERB
arestyrurj-208	37	9	by	by	ADP
arestyrurj-208	37	10	examining	examine	VERB
arestyrurj-208	37	11	the	the	DET
arestyrurj-208	37	12	mrna	mrna	NOUN
arestyrurj-208	37	13	,	,	PUNCT
arestyrurj-208	37	14	the	the	DET
arestyrurj-208	37	15	protein	protein	NOUN
arestyrurj-208	37	16	made	make	VERB
arestyrurj-208	37	17	by	by	ADP
arestyrurj-208	37	18	the	the	DET
arestyrurj-208	37	19	mrna	mrna	PROPN
arestyrurj-208	37	20	transcripts	transcript	NOUN
arestyrurj-208	37	21	.	.	PUNCT
arestyrurj-208	38	1	by	by	ADP
arestyrurj-208	38	2	exploring	explore	VERB
arestyrurj-208	38	3	the	the	DET
arestyrurj-208	38	4	differences	difference	NOUN
arestyrurj-208	38	5	in	in	ADP
arestyrurj-208	38	6	gene	gene	NOUN
arestyrurj-208	38	7	expression	expression	NOUN
arestyrurj-208	38	8	between	between	ADP
arestyrurj-208	38	9	the	the	DET
arestyrurj-208	38	10	diploid	diploid	ADJ
arestyrurj-208	38	11	and	and	CCONJ
arestyrurj-208	38	12	triploid	triploid	ADJ
arestyrurj-208	38	13	colonies	colony	NOUN
arestyrurj-208	38	14	we	we	PRON
arestyrurj-208	38	15	hope	hope	VERB
arestyrurj-208	38	16	to	to	PART
arestyrurj-208	38	17	discover	discover	VERB
arestyrurj-208	38	18	if	if	SCONJ
arestyrurj-208	38	19	,	,	PUNCT
arestyrurj-208	38	20	and	and	CCONJ
arestyrurj-208	38	21	in	in	ADP
arestyrurj-208	38	22	what	what	DET
arestyrurj-208	38	23	way	way	NOUN
arestyrurj-208	38	24	,	,	PUNCT
arestyrurj-208	38	25	polyploidy	polyploidy	ADJ
arestyrurj-208	38	26	provides	provide	VERB
arestyrurj-208	38	27	a	a	DET
arestyrurj-208	38	28	selective	selective	ADJ
arestyrurj-208	38	29	advantage	advantage	NOUN
arestyrurj-208	38	30	.	.	PUNCT
arestyrurj-208	39	1	in	in	ADP
arestyrurj-208	39	2	light	light	NOUN
arestyrurj-208	39	3	of	of	ADP
arestyrurj-208	39	4	the	the	DET
arestyrurj-208	39	5	mass	mass	ADJ
arestyrurj-208	39	6	mortality	mortality	NOUN
arestyrurj-208	39	7	of	of	ADP
arestyrurj-208	39	8	reef	reef	NOUN
arestyrurj-208	39	9	-	-	PUNCT
arestyrurj-208	39	10	building	building	NOUN
arestyrurj-208	39	11	corals	coral	NOUN
arestyrurj-208	39	12	under	under	ADP
arestyrurj-208	39	13	climate	climate	NOUN
arestyrurj-208	39	14	change	change	NOUN
arestyrurj-208	39	15	,	,	PUNCT
arestyrurj-208	39	16	it	it	PRON
arestyrurj-208	39	17	is	be	AUX
arestyrurj-208	39	18	essential	essential	ADJ
arestyrurj-208	39	19	to	to	PART
arestyrurj-208	39	20	generate	generate	VERB
arestyrurj-208	39	21	this	this	DET
arestyrurj-208	39	22	baseline	baseline	ADJ
arestyrurj-208	39	23	information	information	NOUN
arestyrurj-208	39	24	on	on	ADP
arestyrurj-208	39	25	how	how	SCONJ
arestyrurj-208	39	26	triploidy	triploidy	ADJ
arestyrurj-208	39	27	affects	affect	VERB
arestyrurj-208	39	28	gene	gene	NOUN
arestyrurj-208	39	29	expression	expression	NOUN
arestyrurj-208	39	30	and	and	CCONJ
arestyrurj-208	39	31	regulation	regulation	NOUN
arestyrurj-208	39	32	to	to	PART
arestyrurj-208	39	33	develop	develop	VERB
arestyrurj-208	39	34	an	an	DET
arestyrurj-208	39	35	understanding	understanding	NOUN
arestyrurj-208	39	36	of	of	ADP
arestyrurj-208	39	37	how	how	SCONJ
arestyrurj-208	39	38	triploid	triploid	ADJ
arestyrurj-208	39	39	coral	coral	ADJ
arestyrurj-208	39	40	populations	population	NOUN
arestyrurj-208	39	41	may	may	AUX
arestyrurj-208	39	42	respond	respond	VERB
arestyrurj-208	39	43	to	to	ADP
arestyrurj-208	39	44	this	this	DET
arestyrurj-208	39	45	burgeoning	burgeon	VERB
arestyrurj-208	39	46	stressor	stressor	NOUN
arestyrurj-208	39	47	.	.	PUNCT
arestyrurj-208	40	1	2	2	NUM
arestyrurj-208	40	2	methodology	methodology	NOUN
arestyrurj-208	40	3	coral	coral	NOUN
arestyrurj-208	40	4	sampling	sampling	NOUN
arestyrurj-208	40	5	and	and	CCONJ
arestyrurj-208	40	6	collection	collection	NOUN
arestyrurj-208	40	7	corals	coral	NOUN
arestyrurj-208	40	8	were	be	AUX
arestyrurj-208	40	9	collected	collect	VERB
arestyrurj-208	40	10	from	from	ADP
arestyrurj-208	40	11	six	six	NUM
arestyrurj-208	40	12	reefs	reef	NOUN
arestyrurj-208	40	13	in	in	ADP
arestyrurj-208	40	14	kāneʻohe	kāneʻohe	PROPN
arestyrurj-208	40	15	bay	bay	PROPN
arestyrurj-208	40	16	,	,	PUNCT
arestyrurj-208	40	17	a	a	DET
arestyrurj-208	40	18	45	45	NUM
arestyrurj-208	40	19	km²	km²	NOUN
arestyrurj-208	40	20	sheltered	shelter	VERB
arestyrurj-208	40	21	water	water	NOUN
arestyrurj-208	40	22	body	body	NOUN
arestyrurj-208	40	23	in	in	ADP
arestyrurj-208	40	24	oʻahu	oʻahu	PROPN
arestyrurj-208	40	25	,	,	PUNCT
arestyrurj-208	40	26	hawaiʻi	hawaiʻi	PROPN
arestyrurj-208	40	27	in	in	ADP
arestyrurj-208	40	28	september	september	PROPN
arestyrurj-208	40	29	2018	2018	NUM
arestyrurj-208	40	30	.	.	PUNCT
arestyrurj-208	41	1	30	30	NUM
arestyrurj-208	41	2	of	of	ADP
arestyrurj-208	41	3	the	the	DET
arestyrurj-208	41	4	119	119	NUM
arestyrurj-208	41	5	collected	collect	VERB
arestyrurj-208	41	6	samples	sample	NOUN
arestyrurj-208	41	7	were	be	AUX
arestyrurj-208	41	8	cultured	cultured	ADJ
arestyrurj-208	41	9	under	under	ADP
arestyrurj-208	41	10	ambient	ambient	ADJ
arestyrurj-208	41	11	temperature	temperature	NOUN
arestyrurj-208	41	12	ambient	ambient	NOUN
arestyrurj-208	41	13	co2	co2	NOUN
arestyrurj-208	41	14	(	(	PUNCT
arestyrurj-208	41	15	atac	atac	NOUN
arestyrurj-208	41	16	)	)	PUNCT
arestyrurj-208	41	17	for	for	ADP
arestyrurj-208	41	18	a	a	DET
arestyrurj-208	41	19	4	4	NUM
arestyrurj-208	41	20	-	-	PUNCT
arestyrurj-208	41	21	month	month	NOUN
arestyrurj-208	41	22	period	period	NOUN
arestyrurj-208	41	23	.	.	PUNCT
arestyrurj-208	42	1	molecular	molecular	ADJ
arestyrurj-208	42	2	samples	sample	NOUN
arestyrurj-208	42	3	for	for	ADP
arestyrurj-208	42	4	rna	rna	NOUN
arestyrurj-208	42	5	-	-	PUNCT
arestyrurj-208	42	6	seq	seq	NOUN
arestyrurj-208	42	7	and	and	CCONJ
arestyrurj-208	42	8	bisulfite	bisulfite	NOUN
arestyrurj-208	42	9	sequencing	sequencing	NOUN
arestyrurj-208	42	10	were	be	AUX
arestyrurj-208	42	11	obtained	obtain	VERB
arestyrurj-208	42	12	on	on	ADP
arestyrurj-208	42	13	days	day	NOUN
arestyrurj-208	42	14	1	1	NUM
arestyrurj-208	42	15	and	and	CCONJ
arestyrurj-208	42	16	2	2	NUM
arestyrurj-208	42	17	,	,	PUNCT
arestyrurj-208	42	18	and	and	CCONJ
arestyrurj-208	42	19	on	on	ADP
arestyrurj-208	42	20	weeks	week	NOUN
arestyrurj-208	42	21	1	1	NUM
arestyrurj-208	42	22	,	,	PUNCT
arestyrurj-208	42	23	2	2	NUM
arestyrurj-208	42	24	,	,	PUNCT
arestyrurj-208	42	25	4	4	NUM
arestyrurj-208	42	26	,	,	PUNCT
arestyrurj-208	42	27	6	6	NUM
arestyrurj-208	42	28	,	,	PUNCT
arestyrurj-208	42	29	8	8	NUM
arestyrurj-208	42	30	,	,	PUNCT
arestyrurj-208	42	31	12	12	NUM
arestyrurj-208	42	32	,	,	PUNCT
arestyrurj-208	42	33	and	and	CCONJ
arestyrurj-208	42	34	16	16	NUM
arestyrurj-208	42	35	.	.	PUNCT
arestyrurj-208	43	1	rna	rna	NOUN
arestyrurj-208	43	2	extraction	extraction	NOUN
arestyrurj-208	43	3	and	and	CCONJ
arestyrurj-208	43	4	sequencing	sequencing	NOUN
arestyrurj-208	43	5	,	,	PUNCT
arestyrurj-208	43	6	read	read	VERB
arestyrurj-208	43	7	trimming	trimming	NOUN
arestyrurj-208	43	8	,	,	PUNCT
arestyrurj-208	43	9	and	and	CCONJ
arestyrurj-208	43	10	gene	gene	NOUN
arestyrurj-208	43	11	count	count	NOUN
arestyrurj-208	43	12	estimation	estimation	NOUN
arestyrurj-208	43	13	were	be	AUX
arestyrurj-208	43	14	conducted	conduct	VERB
arestyrurj-208	43	15	as	as	SCONJ
arestyrurj-208	43	16	described	describe	VERB
arestyrurj-208	43	17	in	in	ADP
arestyrurj-208	43	18	stephens	stephens	PROPN
arestyrurj-208	43	19	et	et	PROPN
arestyrurj-208	43	20	al	al	PROPN
arestyrurj-208	43	21	.	.	PROPN
arestyrurj-208	44	1	(	(	PUNCT
arestyrurj-208	44	2	2021	2021	NUM
arestyrurj-208	44	3	)	)	PUNCT
arestyrurj-208	44	4	.	.	PUNCT
arestyrurj-208	45	1	rna	rna	PROPN
arestyrurj-208	45	2	was	be	AUX
arestyrurj-208	45	3	extracted	extract	VERB
arestyrurj-208	45	4	from	from	ADP
arestyrurj-208	45	5	a	a	DET
arestyrurj-208	45	6	small	small	ADJ
arestyrurj-208	45	7	clipping	clipping	NOUN
arestyrurj-208	45	8	using	use	VERB
arestyrurj-208	45	9	the	the	DET
arestyrurj-208	45	10	zymo	zymo	NOUN
arestyrurj-208	45	11	quick	quick	ADJ
arestyrurj-208	45	12	-	-	PUNCT
arestyrurj-208	45	13	dna	dna	NOUN
arestyrurj-208	45	14	/	/	SYM
arestyrurj-208	45	15	rna	rna	NOUN
arestyrurj-208	45	16	™	™	PROPN
arestyrurj-208	45	17	miniprep	miniprep	NOUN
arestyrurj-208	45	18	plus	plus	CCONJ
arestyrurj-208	45	19	kit	kit	NOUN
arestyrurj-208	45	20	(	(	PUNCT
arestyrurj-208	45	21	zymo	zymo	NOUN
arestyrurj-208	45	22	research	research	NOUN
arestyrurj-208	45	23	,	,	PUNCT
arestyrurj-208	45	24	irvine	irvine	PROPN
arestyrurj-208	45	25	,	,	PUNCT
arestyrurj-208	45	26	ca	ca	PROPN
arestyrurj-208	45	27	,	,	PUNCT
arestyrurj-208	45	28	usa	usa	PROPN
arestyrurj-208	45	29	)	)	PUNCT
arestyrurj-208	45	30	following	follow	VERB
arestyrurj-208	45	31	the	the	DET
arestyrurj-208	45	32	manufacturer	manufacturer	NOUN
arestyrurj-208	45	33	’s	’s	PART
arestyrurj-208	45	34	protocol	protocol	NOUN
arestyrurj-208	45	35	for	for	ADP
arestyrurj-208	45	36	tissue	tissue	NOUN
arestyrurj-208	45	37	samples	sample	NOUN
arestyrurj-208	45	38	.	.	PUNCT
arestyrurj-208	46	1	rna	rna	NOUN
arestyrurj-208	46	2	library	library	NOUN
arestyrurj-208	46	3	preparation	preparation	NOUN
arestyrurj-208	46	4	and	and	CCONJ
arestyrurj-208	46	5	sequencing	sequencing	NOUN
arestyrurj-208	46	6	was	be	AUX
arestyrurj-208	46	7	then	then	ADV
arestyrurj-208	46	8	performed	perform	VERB
arestyrurj-208	46	9	at	at	ADP
arestyrurj-208	46	10	genewiz	genewiz	NOUN
arestyrurj-208	46	11	(	(	PUNCT
arestyrurj-208	46	12	south	south	ADJ
arestyrurj-208	46	13	plainfield	plainfield	PROPN
arestyrurj-208	46	14	,	,	PUNCT
arestyrurj-208	46	15	new	new	PROPN
arestyrurj-208	46	16	jersey	jersey	PROPN
arestyrurj-208	46	17	,	,	PUNCT
arestyrurj-208	46	18	usa	usa	PROPN
arestyrurj-208	46	19	)	)	PUNCT
arestyrurj-208	46	20	following	follow	VERB
arestyrurj-208	46	21	the	the	DET
arestyrurj-208	46	22	truseq	truseq	NOUN
arestyrurj-208	46	23	stranded	strand	VERB
arestyrurj-208	46	24	mrna	mrna	PROPN
arestyrurj-208	46	25	sample	sample	NOUN
arestyrurj-208	46	26	preparation	preparation	NOUN
arestyrurj-208	46	27	protocol	protocol	NOUN
arestyrurj-208	46	28	(	(	PUNCT
arestyrurj-208	46	29	illumina	illumina	PROPN
arestyrurj-208	46	30	)	)	PUNCT
arestyrurj-208	46	31	with	with	ADP
arestyrurj-208	46	32	poly	poly	ADJ
arestyrurj-208	46	33	-	-	PUNCT
arestyrurj-208	46	34	a	a	DET
arestyrurj-208	46	35	enrichment	enrichment	NOUN
arestyrurj-208	46	36	and	and	CCONJ
arestyrurj-208	46	37	hiseq	hiseq	NOUN
arestyrurj-208	46	38	sequencing	sequence	VERB
arestyrurj-208	46	39	workflow	workflow	NOUN
arestyrurj-208	46	40	targeting	target	VERB
arestyrurj-208	46	41	15	15	NUM
arestyrurj-208	46	42	million	million	NUM
arestyrurj-208	46	43	reads	read	NOUN
arestyrurj-208	46	44	per	per	ADP
arestyrurj-208	46	45	sample	sample	NOUN
arestyrurj-208	46	46	.	.	PUNCT
arestyrurj-208	47	1	quality	quality	NOUN
arestyrurj-208	47	2	trimming	trimming	NOUN
arestyrurj-208	47	3	,	,	PUNCT
arestyrurj-208	47	4	adaptor	adaptor	NOUN
arestyrurj-208	47	5	removal	removal	NOUN
arestyrurj-208	47	6	,	,	PUNCT
arestyrurj-208	47	7	and	and	CCONJ
arestyrurj-208	47	8	gene	gene	NOUN
arestyrurj-208	47	9	count	count	NOUN
arestyrurj-208	47	10	estimation	estimation	NOUN
arestyrurj-208	47	11	were	be	AUX
arestyrurj-208	47	12	performed	perform	VERB
arestyrurj-208	47	13	,	,	PUNCT
arestyrurj-208	47	14	and	and	CCONJ
arestyrurj-208	47	15	the	the	DET
arestyrurj-208	47	16	resulting	result	VERB
arestyrurj-208	47	17	gene	gene	NOUN
arestyrurj-208	47	18	count	count	NOUN
arestyrurj-208	47	19	matrix	matrix	NOUN
arestyrurj-208	47	20	was	be	AUX
arestyrurj-208	47	21	used	use	VERB
arestyrurj-208	47	22	for	for	ADP
arestyrurj-208	47	23	differential	differential	ADJ
arestyrurj-208	47	24	expression	expression	NOUN
arestyrurj-208	47	25	analysis	analysis	NOUN
arestyrurj-208	47	26	as	as	SCONJ
arestyrurj-208	47	27	described	describe	VERB
arestyrurj-208	47	28	below	below	ADV
arestyrurj-208	47	29	.	.	PUNCT
arestyrurj-208	48	1	differential	differential	ADJ
arestyrurj-208	48	2	gene	gene	NOUN
arestyrurj-208	48	3	expression	expression	NOUN
arestyrurj-208	48	4	using	use	VERB
arestyrurj-208	48	5	r	r	NOUN
arestyrurj-208	48	6	version	version	NOUN
arestyrurj-208	48	7	4.0.5	4.0.5	NUM
arestyrurj-208	48	8	and	and	CCONJ
arestyrurj-208	48	9	the	the	DET
arestyrurj-208	48	10	edger	edger	NOUN
arestyrurj-208	48	11	package	package	NOUN
arestyrurj-208	48	12	v.	v.	ADP
arestyrurj-208	48	13	3.15	3.15	NUM
arestyrurj-208	48	14	(	(	PUNCT
arestyrurj-208	48	15	robinson	robinson	PROPN
arestyrurj-208	48	16	et	et	PROPN
arestyrurj-208	48	17	al	al	PROPN
arestyrurj-208	48	18	.	.	PROPN
arestyrurj-208	48	19	,	,	PUNCT
arestyrurj-208	48	20	2010	2010	NUM
arestyrurj-208	48	21	)	)	PUNCT
arestyrurj-208	48	22	,	,	PUNCT
arestyrurj-208	48	23	pairwise	pairwise	PROPN
arestyrurj-208	48	24	aresty	aresty	ADJ
arestyrurj-208	48	25	rutgers	rutgers	PROPN
arestyrurj-208	48	26	undergraduate	undergraduate	PROPN
arestyrurj-208	48	27	research	research	PROPN
arestyrurj-208	48	28	journal	journal	PROPN
arestyrurj-208	48	29	,	,	PUNCT
arestyrurj-208	48	30	volume	volume	NOUN
arestyrurj-208	48	31	i	i	PRON
arestyrurj-208	48	32	,	,	PUNCT
arestyrurj-208	48	33	issue	issue	NOUN
arestyrurj-208	48	34	iv	iv	NUM
arestyrurj-208	48	35	comparisons	comparison	NOUN
arestyrurj-208	48	36	of	of	ADP
arestyrurj-208	48	37	differential	differential	ADJ
arestyrurj-208	48	38	gene	gene	NOUN
arestyrurj-208	48	39	expression	expression	NOUN
arestyrurj-208	48	40	were	be	AUX
arestyrurj-208	48	41	conducted	conduct	VERB
arestyrurj-208	48	42	on	on	ADP
arestyrurj-208	48	43	the	the	DET
arestyrurj-208	48	44	27,254	27,254	NUM
arestyrurj-208	48	45	genes	gene	NOUN
arestyrurj-208	48	46	that	that	PRON
arestyrurj-208	48	47	passed	pass	VERB
arestyrurj-208	48	48	the	the	DET
arestyrurj-208	48	49	low	low	ADJ
arestyrurj-208	48	50	coverage	coverage	NOUN
arestyrurj-208	48	51	filter	filter	NOUN
arestyrurj-208	48	52	of	of	ADP
arestyrurj-208	48	53	gene	gene	NOUN
arestyrurj-208	48	54	counts	count	VERB
arestyrurj-208	48	55	less	less	ADJ
arestyrurj-208	48	56	than	than	ADP
arestyrurj-208	48	57	10	10	NUM
arestyrurj-208	48	58	(	(	PUNCT
arestyrurj-208	48	59	robinson	robinson	PROPN
arestyrurj-208	48	60	et	et	PROPN
arestyrurj-208	48	61	al	al	PROPN
arestyrurj-208	48	62	.	.	PROPN
arestyrurj-208	48	63	2010	2010	NUM
arestyrurj-208	48	64	)	)	PUNCT
arestyrurj-208	48	65	.	.	PUNCT
arestyrurj-208	49	1	three	three	NUM
arestyrurj-208	49	2	pairwise	pairwise	NOUN
arestyrurj-208	49	3	gene	gene	NOUN
arestyrurj-208	49	4	expression	expression	NOUN
arestyrurj-208	49	5	comparisons	comparison	NOUN
arestyrurj-208	49	6	were	be	AUX
arestyrurj-208	49	7	conducted	conduct	VERB
arestyrurj-208	49	8	:	:	PUNCT
arestyrurj-208	49	9	t1	t1	NOUN
arestyrurj-208	49	10	vs.	vs.	X
arestyrurj-208	49	11	d	d	PROPN
arestyrurj-208	49	12	,	,	PUNCT
arestyrurj-208	49	13	t2	t2	PROPN
arestyrurj-208	49	14	vs.	vs.	X
arestyrurj-208	49	15	d	d	PROPN
arestyrurj-208	49	16	and	and	CCONJ
arestyrurj-208	49	17	t1	t1	NOUN
arestyrurj-208	49	18	vs.	vs.	ADP
arestyrurj-208	49	19	t2	t2	NOUN
arestyrurj-208	49	20	,	,	PUNCT
arestyrurj-208	49	21	using	use	VERB
arestyrurj-208	49	22	deseq2	deseq2	PROPN
arestyrurj-208	49	23	(	(	PUNCT
arestyrurj-208	49	24	v.	v.	ADV
arestyrurj-208	49	25	3.14	3.14	NUM
arestyrurj-208	49	26	)	)	PUNCT
arestyrurj-208	49	27	(	(	PUNCT
arestyrurj-208	49	28	love	love	NOUN
arestyrurj-208	49	29	et	et	PROPN
arestyrurj-208	49	30	al	al	PROPN
arestyrurj-208	49	31	.	.	PROPN
arestyrurj-208	49	32	2014	2014	NUM
arestyrurj-208	49	33	)	)	PUNCT
arestyrurj-208	49	34	.	.	PUNCT
arestyrurj-208	50	1	the	the	DET
arestyrurj-208	50	2	detected	detect	VERB
arestyrurj-208	50	3	differentially	differentially	ADV
arestyrurj-208	50	4	expressed	express	VERB
arestyrurj-208	50	5	genes	gene	NOUN
arestyrurj-208	50	6	were	be	AUX
arestyrurj-208	50	7	filtered	filter	VERB
arestyrurj-208	50	8	based	base	VERB
arestyrurj-208	50	9	on	on	ADP
arestyrurj-208	50	10	adjusted	adjust	VERB
arestyrurj-208	50	11	p	p	NOUN
arestyrurj-208	50	12	-	-	PUNCT
arestyrurj-208	50	13	values	value	NOUN
arestyrurj-208	50	14	less	less	ADJ
arestyrurj-208	50	15	than	than	ADP
arestyrurj-208	50	16	0.05	0.05	NUM
arestyrurj-208	50	17	and	and	CCONJ
arestyrurj-208	50	18	fold	fold	ADJ
arestyrurj-208	50	19	changes	change	NOUN
arestyrurj-208	50	20	(	(	PUNCT
arestyrurj-208	50	21	fc	fc	INTJ
arestyrurj-208	50	22	)	)	PUNCT
arestyrurj-208	50	23	greater	great	ADJ
arestyrurj-208	50	24	than	than	ADP
arestyrurj-208	50	25	1	1	NUM
arestyrurj-208	50	26	for	for	ADP
arestyrurj-208	50	27	upregulated	upregulated	ADJ
arestyrurj-208	50	28	genes	gene	NOUN
arestyrurj-208	50	29	and	and	CCONJ
arestyrurj-208	50	30	less	less	ADJ
arestyrurj-208	50	31	than	than	ADP
arestyrurj-208	50	32	-1	-1	PUNCT
arestyrurj-208	50	33	for	for	ADP
arestyrurj-208	50	34	downregulated	downregulate	VERB
arestyrurj-208	50	35	genes	gene	NOUN
arestyrurj-208	50	36	.	.	PUNCT
arestyrurj-208	51	1	the	the	DET
arestyrurj-208	51	2	upset	upset	ADJ
arestyrurj-208	51	3	r	r	NOUN
arestyrurj-208	51	4	package	package	NOUN
arestyrurj-208	51	5	was	be	AUX
arestyrurj-208	51	6	used	use	VERB
arestyrurj-208	51	7	to	to	PART
arestyrurj-208	51	8	represent	represent	VERB
arestyrurj-208	51	9	the	the	DET
arestyrurj-208	51	10	six	six	NUM
arestyrurj-208	51	11	sets	set	NOUN
arestyrurj-208	51	12	of	of	ADP
arestyrurj-208	51	13	differentially	differentially	ADV
arestyrurj-208	51	14	expressed	express	VERB
arestyrurj-208	51	15	genes	gene	NOUN
arestyrurj-208	51	16	(	(	PUNCT
arestyrurj-208	51	17	degs	deg	NOUN
arestyrurj-208	51	18	)	)	PUNCT
arestyrurj-208	51	19	(	(	PUNCT
arestyrurj-208	51	20	upregulated	upregulate	VERB
arestyrurj-208	51	21	and	and	CCONJ
arestyrurj-208	51	22	downregulated	downregulate	VERB
arestyrurj-208	51	23	genes	gene	NOUN
arestyrurj-208	51	24	in	in	ADP
arestyrurj-208	51	25	t1	t1	PROPN
arestyrurj-208	51	26	,	,	PUNCT
arestyrurj-208	51	27	t2	t2	NOUN
arestyrurj-208	51	28	,	,	PUNCT
arestyrurj-208	51	29	and	and	CCONJ
arestyrurj-208	51	30	d	d	NOUN
arestyrurj-208	51	31	samples	sample	NOUN
arestyrurj-208	51	32	)	)	PUNCT
arestyrurj-208	51	33	(	(	PUNCT
arestyrurj-208	51	34	conway	conway	NOUN
arestyrurj-208	51	35	et	et	PROPN
arestyrurj-208	51	36	al	al	PROPN
arestyrurj-208	51	37	.	.	PROPN
arestyrurj-208	51	38	2017	2017	NUM
arestyrurj-208	51	39	)	)	PUNCT
arestyrurj-208	51	40	.	.	PUNCT
arestyrurj-208	52	1	this	this	DET
arestyrurj-208	52	2	plot	plot	NOUN
arestyrurj-208	52	3	represents	represent	VERB
arestyrurj-208	52	4	nonempty	nonempty	ADJ
arestyrurj-208	52	5	and	and	CCONJ
arestyrurj-208	52	6	overlapping	overlap	VERB
arestyrurj-208	52	7	genes	gene	NOUN
arestyrurj-208	52	8	that	that	PRON
arestyrurj-208	52	9	were	be	AUX
arestyrurj-208	52	10	differentially	differentially	ADV
arestyrurj-208	52	11	regulated	regulate	VERB
arestyrurj-208	52	12	between	between	ADP
arestyrurj-208	52	13	the	the	DET
arestyrurj-208	52	14	pairwise	pairwise	NOUN
arestyrurj-208	52	15	comparisons	comparison	NOUN
arestyrurj-208	52	16	.	.	PUNCT
arestyrurj-208	53	1	gene	gene	NOUN
arestyrurj-208	53	2	ontology	ontology	NOUN
arestyrurj-208	53	3	gene	gene	NOUN
arestyrurj-208	53	4	ontology	ontology	NOUN
arestyrurj-208	53	5	(	(	PUNCT
arestyrurj-208	53	6	go	go	VERB
arestyrurj-208	53	7	)	)	PUNCT
arestyrurj-208	53	8	terms	term	NOUN
arestyrurj-208	53	9	are	be	AUX
arestyrurj-208	53	10	a	a	DET
arestyrurj-208	53	11	hierarchy	hierarchy	NOUN
arestyrurj-208	53	12	of	of	ADP
arestyrurj-208	53	13	terms	term	NOUN
arestyrurj-208	53	14	/	/	SYM
arestyrurj-208	53	15	descriptions	description	NOUN
arestyrurj-208	53	16	that	that	PRON
arestyrurj-208	53	17	uses	use	VERB
arestyrurj-208	53	18	a	a	DET
arestyrurj-208	53	19	controlled	control	VERB
arestyrurj-208	53	20	vocabulary	vocabulary	NOUN
arestyrurj-208	53	21	to	to	PART
arestyrurj-208	53	22	describe	describe	VERB
arestyrurj-208	53	23	the	the	DET
arestyrurj-208	53	24	known	know	VERB
arestyrurj-208	53	25	or	or	CCONJ
arestyrurj-208	53	26	inferred	infer	VERB
arestyrurj-208	53	27	properties	property	NOUN
arestyrurj-208	53	28	of	of	ADP
arestyrurj-208	53	29	a	a	DET
arestyrurj-208	53	30	gene	gene	NOUN
arestyrurj-208	53	31	/	/	SYM
arestyrurj-208	53	32	protein	protein	NOUN
arestyrurj-208	53	33	.	.	PUNCT
arestyrurj-208	54	1	in	in	ADP
arestyrurj-208	54	2	this	this	DET
arestyrurj-208	54	3	study	study	NOUN
arestyrurj-208	54	4	,	,	PUNCT
arestyrurj-208	54	5	gene	gene	NOUN
arestyrurj-208	54	6	ontology	ontology	NOUN
arestyrurj-208	54	7	and	and	CCONJ
arestyrurj-208	54	8	annotation	annotation	NOUN
arestyrurj-208	54	9	were	be	AUX
arestyrurj-208	54	10	conducted	conduct	VERB
arestyrurj-208	54	11	following	follow	VERB
arestyrurj-208	54	12	the	the	DET
arestyrurj-208	54	13	go	go	NOUN
arestyrurj-208	54	14	pipeline	pipeline	NOUN
arestyrurj-208	54	15	outlined	outline	VERB
arestyrurj-208	54	16	in	in	ADP
arestyrurj-208	54	17	chille	chille	PROPN
arestyrurj-208	54	18	et	et	PROPN
arestyrurj-208	54	19	al	al	PROPN
arestyrurj-208	54	20	.	.	PROPN
arestyrurj-208	55	1	(	(	PUNCT
arestyrurj-208	55	2	2021	2021	NUM
arestyrurj-208	55	3	)	)	PUNCT
arestyrurj-208	56	1	to	to	PART
arestyrurj-208	56	2	annotate	annotate	VERB
arestyrurj-208	56	3	genes	gene	NOUN
arestyrurj-208	56	4	by	by	ADP
arestyrurj-208	56	5	relevant	relevant	ADJ
arestyrurj-208	56	6	protein	protein	NOUN
arestyrurj-208	56	7	accession	accession	NOUN
arestyrurj-208	56	8	ids	id	NOUN
arestyrurj-208	56	9	for	for	ADP
arestyrurj-208	56	10	triploid	triploid	ADJ
arestyrurj-208	56	11	and	and	CCONJ
arestyrurj-208	56	12	diploid	diploid	ADJ
arestyrurj-208	56	13	samples	sample	NOUN
arestyrurj-208	56	14	of	of	ADP
arestyrurj-208	56	15	p.	p.	NOUN
arestyrurj-208	56	16	acuta	acuta	NOUN
arestyrurj-208	56	17	.	.	PUNCT
arestyrurj-208	57	1	briefly	briefly	NOUN
arestyrurj-208	57	2	,	,	PUNCT
arestyrurj-208	57	3	diamond	diamond	NOUN
arestyrurj-208	57	4	(	(	PUNCT
arestyrurj-208	57	5	v.	v.	ADP
arestyrurj-208	57	6	0.0.14	0.0.14	NUM
arestyrurj-208	57	7	)	)	PUNCT
arestyrurj-208	57	8	was	be	AUX
arestyrurj-208	57	9	used	use	VERB
arestyrurj-208	57	10	to	to	PART
arestyrurj-208	57	11	align	align	VERB
arestyrurj-208	57	12	protein	protein	NOUN
arestyrurj-208	57	13	and	and	CCONJ
arestyrurj-208	57	14	translated	translate	VERB
arestyrurj-208	57	15	dna	dna	NOUN
arestyrurj-208	57	16	sequences	sequence	NOUN
arestyrurj-208	57	17	against	against	ADP
arestyrurj-208	57	18	the	the	DET
arestyrurj-208	57	19	refseq	refseq	NOUN
arestyrurj-208	57	20	non	non	ADJ
arestyrurj-208	57	21	-	-	ADJ
arestyrurj-208	57	22	redundant	redundant	ADJ
arestyrurj-208	57	23	protein	protein	NOUN
arestyrurj-208	57	24	sequence	sequence	NOUN
arestyrurj-208	57	25	database	database	NOUN
arestyrurj-208	57	26	(	(	PUNCT
arestyrurj-208	57	27	nr	nr	NOUN
arestyrurj-208	57	28	database	database	NOUN
arestyrurj-208	57	29	)	)	PUNCT
arestyrurj-208	57	30	compiled	compile	VERB
arestyrurj-208	57	31	by	by	ADP
arestyrurj-208	57	32	the	the	DET
arestyrurj-208	57	33	ncbi	ncbi	PROPN
arestyrurj-208	57	34	(	(	PUNCT
arestyrurj-208	57	35	buchfink	buchfink	VERB
arestyrurj-208	57	36	et	et	PROPN
arestyrurj-208	57	37	al	al	PROPN
arestyrurj-208	57	38	.	.	PROPN
arestyrurj-208	57	39	2015	2015	NUM
arestyrurj-208	57	40	)	)	PUNCT
arestyrurj-208	57	41	.	.	PUNCT
arestyrurj-208	58	1	to	to	PART
arestyrurj-208	58	2	obtain	obtain	VERB
arestyrurj-208	58	3	gene	gene	NOUN
arestyrurj-208	58	4	ontology	ontology	NOUN
arestyrurj-208	58	5	and	and	CCONJ
arestyrurj-208	58	6	annotation	annotation	NOUN
arestyrurj-208	58	7	information	information	NOUN
arestyrurj-208	58	8	from	from	ADP
arestyrurj-208	58	9	multiple	multiple	ADJ
arestyrurj-208	58	10	databases	database	NOUN
arestyrurj-208	58	11	,	,	PUNCT
arestyrurj-208	58	12	interproscan	interproscan	X
arestyrurj-208	58	13	(	(	PUNCT
arestyrurj-208	58	14	v.	v.	ADP
arestyrurj-208	58	15	5.53	5.53	NUM
arestyrurj-208	58	16	-	-	SYM
arestyrurj-208	58	17	87.0	87.0	NUM
arestyrurj-208	58	18	)	)	PUNCT
arestyrurj-208	58	19	was	be	AUX
arestyrurj-208	58	20	used	use	VERB
arestyrurj-208	58	21	to	to	PART
arestyrurj-208	58	22	search	search	VERB
arestyrurj-208	58	23	the	the	DET
arestyrurj-208	58	24	interpro	interpro	ADJ
arestyrurj-208	58	25	database	database	NOUN
arestyrurj-208	58	26	to	to	PART
arestyrurj-208	58	27	compile	compile	VERB
arestyrurj-208	58	28	additional	additional	ADJ
arestyrurj-208	58	29	information	information	NOUN
arestyrurj-208	58	30	about	about	ADP
arestyrurj-208	58	31	p.	p.	NOUN
arestyrurj-208	58	32	acuta	acuta	NOUN
arestyrurj-208	58	33	protein	protein	NOUN
arestyrurj-208	58	34	sequences	sequence	NOUN
arestyrurj-208	58	35	(	(	PUNCT
arestyrurj-208	58	36	jones	jones	PROPN
arestyrurj-208	58	37	et	et	PROPN
arestyrurj-208	58	38	al	al	PROPN
arestyrurj-208	58	39	.	.	PROPN
arestyrurj-208	58	40	2014	2014	NUM
arestyrurj-208	58	41	)	)	PUNCT
arestyrurj-208	58	42	.	.	PUNCT
arestyrurj-208	59	1	blast2go	blast2go	PROPN
arestyrurj-208	59	2	is	be	AUX
arestyrurj-208	59	3	a	a	DET
arestyrurj-208	59	4	powerful	powerful	ADJ
arestyrurj-208	59	5	bioinformatics	bioinformatics	NOUN
arestyrurj-208	59	6	platform	platform	NOUN
arestyrurj-208	59	7	for	for	ADP
arestyrurj-208	59	8	gene	gene	NOUN
arestyrurj-208	59	9	annotation	annotation	NOUN
arestyrurj-208	59	10	and	and	CCONJ
arestyrurj-208	59	11	ontology	ontology	NOUN
arestyrurj-208	59	12	.	.	PUNCT
arestyrurj-208	60	1	using	use	VERB
arestyrurj-208	60	2	the	the	DET
arestyrurj-208	60	3	previously	previously	ADV
arestyrurj-208	60	4	generated	generate	VERB
arestyrurj-208	60	5	diamond	diamond	NOUN
arestyrurj-208	60	6	results	result	NOUN
arestyrurj-208	60	7	as	as	ADP
arestyrurj-208	60	8	input	input	NOUN
arestyrurj-208	60	9	,	,	PUNCT
arestyrurj-208	60	10	the	the	DET
arestyrurj-208	60	11	mapping	mapping	NOUN
arestyrurj-208	60	12	and	and	CCONJ
arestyrurj-208	60	13	annotation	annotation	NOUN
arestyrurj-208	60	14	tools	tool	NOUN
arestyrurj-208	60	15	on	on	ADP
arestyrurj-208	60	16	blast2go	blast2go	NOUN
arestyrurj-208	60	17	were	be	AUX
arestyrurj-208	60	18	used	use	VERB
arestyrurj-208	60	19	to	to	PART
arestyrurj-208	60	20	map	map	VERB
arestyrurj-208	60	21	and	and	CCONJ
arestyrurj-208	60	22	annotate	annotate	VERB
arestyrurj-208	60	23	the	the	DET
arestyrurj-208	60	24	p.	p.	NOUN
arestyrurj-208	60	25	acuta	acuta	NOUN
arestyrurj-208	60	26	gene	gene	NOUN
arestyrurj-208	60	27	sequences	sequence	NOUN
arestyrurj-208	60	28	.	.	PUNCT
arestyrurj-208	61	1	out	out	ADP
arestyrurj-208	61	2	of	of	ADP
arestyrurj-208	61	3	the	the	DET
arestyrurj-208	61	4	38,532	38,532	NUM
arestyrurj-208	61	5	gene	gene	NOUN
arestyrurj-208	61	6	sequences	sequence	NOUN
arestyrurj-208	61	7	,	,	PUNCT
arestyrurj-208	61	8	5073	5073	NUM
arestyrurj-208	61	9	were	be	AUX
arestyrurj-208	61	10	mapped	map	VERB
arestyrurj-208	61	11	.	.	PUNCT
arestyrurj-208	62	1	then	then	ADV
arestyrurj-208	62	2	,	,	PUNCT
arestyrurj-208	62	3	interproscan	interproscan	ADV
arestyrurj-208	62	4	go	go	VERB
arestyrurj-208	62	5	results	result	NOUN
arestyrurj-208	62	6	were	be	AUX
arestyrurj-208	62	7	merged	merge	VERB
arestyrurj-208	62	8	with	with	ADP
arestyrurj-208	62	9	the	the	DET
arestyrurj-208	62	10	mapped	map	VERB
arestyrurj-208	62	11	and	and	CCONJ
arestyrurj-208	62	12	annotated	annotate	VERB
arestyrurj-208	62	13	sequences	sequence	NOUN
arestyrurj-208	62	14	from	from	ADP
arestyrurj-208	62	15	blast2go	blast2go	PROPN
arestyrurj-208	62	16	.	.	PUNCT
arestyrurj-208	63	1	the	the	DET
arestyrurj-208	63	2	accession	accession	NOUN
arestyrurj-208	63	3	ids	ids	NOUN
arestyrurj-208	63	4	for	for	ADP
arestyrurj-208	63	5	the	the	DET
arestyrurj-208	63	6	gene	gene	NOUN
arestyrurj-208	63	7	sequences	sequence	NOUN
arestyrurj-208	63	8	(	(	PUNCT
arestyrurj-208	63	9	generated	generate	VERB
arestyrurj-208	63	10	by	by	ADP
arestyrurj-208	63	11	blast2go	blast2go	PROPN
arestyrurj-208	63	12	after	after	ADP
arestyrurj-208	63	13	mapping	mapping	NOUN
arestyrurj-208	63	14	and	and	CCONJ
arestyrurj-208	63	15	annotation	annotation	NOUN
arestyrurj-208	63	16	)	)	PUNCT
arestyrurj-208	63	17	were	be	AUX
arestyrurj-208	63	18	then	then	ADV
arestyrurj-208	63	19	run	run	VERB
arestyrurj-208	63	20	against	against	ADP
arestyrurj-208	63	21	the	the	DET
arestyrurj-208	63	22	uniprot	uniprot	ADJ
arestyrurj-208	63	23	database	database	NOUN
arestyrurj-208	63	24	.	.	PUNCT
arestyrurj-208	64	1	3	3	NUM
arestyrurj-208	64	2	results	result	VERB
arestyrurj-208	64	3	rna	rna	NOUN
arestyrurj-208	64	4	sequencing	sequencing	NOUN
arestyrurj-208	64	5	,	,	PUNCT
arestyrurj-208	64	6	quality	quality	NOUN
arestyrurj-208	64	7	control	control	NOUN
arestyrurj-208	64	8	and	and	CCONJ
arestyrurj-208	64	9	clustering	clustering	NOUN
arestyrurj-208	64	10	of	of	ADP
arestyrurj-208	64	11	samples	sample	NOUN
arestyrurj-208	64	12	for	for	ADP
arestyrurj-208	64	13	all	all	DET
arestyrurj-208	64	14	30	30	NUM
arestyrurj-208	64	15	samples	sample	NOUN
arestyrurj-208	64	16	collected	collect	VERB
arestyrurj-208	64	17	at	at	ADP
arestyrurj-208	64	18	atac	atac	NOUN
arestyrurj-208	64	19	,	,	PUNCT
arestyrurj-208	64	20	38,532	38,532	NUM
arestyrurj-208	64	21	genes	gene	NOUN
arestyrurj-208	64	22	were	be	AUX
arestyrurj-208	64	23	predicted	predict	VERB
arestyrurj-208	64	24	as	as	SCONJ
arestyrurj-208	64	25	described	describe	VERB
arestyrurj-208	64	26	in	in	ADP
arestyrurj-208	64	27	stephens	stephens	PROPN
arestyrurj-208	64	28	et	et	PROPN
arestyrurj-208	64	29	al	al	PROPN
arestyrurj-208	64	30	.	.	PROPN
arestyrurj-208	64	31	(	(	PUNCT
arestyrurj-208	64	32	2021	2021	NUM
arestyrurj-208	64	33	)	)	PUNCT
arestyrurj-208	64	34	.	.	PUNCT
arestyrurj-208	65	1	pre	pre	VERB
arestyrurj-208	65	2	-	-	ADJ
arestyrurj-208	65	3	filtering	filter	VERB
arestyrurj-208	65	4	to	to	PART
arestyrurj-208	65	5	retain	retain	VERB
arestyrurj-208	65	6	genes	gene	NOUN
arestyrurj-208	65	7	with	with	ADP
arestyrurj-208	65	8	cpm	cpm	PROPN
arestyrurj-208	65	9	(	(	PUNCT
arestyrurj-208	65	10	counts	count	NOUN
arestyrurj-208	65	11	per	per	ADP
arestyrurj-208	65	12	million	million	NUM
arestyrurj-208	65	13	)	)	PUNCT
arestyrurj-208	65	14	over	over	ADP
arestyrurj-208	65	15	3.33	3.33	NUM
arestyrurj-208	65	16	in	in	ADP
arestyrurj-208	65	17	at	at	ADV
arestyrurj-208	65	18	least	least	ADJ
arestyrurj-208	65	19	2	2	NUM
arestyrurj-208	65	20	samples	sample	NOUN
arestyrurj-208	65	21	resulted	result	VERB
arestyrurj-208	65	22	in	in	ADP
arestyrurj-208	65	23	27,252	27,252	NUM
arestyrurj-208	65	24	genes	gene	NOUN
arestyrurj-208	65	25	being	be	AUX
arestyrurj-208	65	26	selected	select	VERB
arestyrurj-208	65	27	for	for	ADP
arestyrurj-208	65	28	analysis	analysis	NOUN
arestyrurj-208	65	29	.	.	PUNCT
arestyrurj-208	66	1	out	out	ADP
arestyrurj-208	66	2	of	of	ADP
arestyrurj-208	66	3	the	the	DET
arestyrurj-208	66	4	30	30	NUM
arestyrurj-208	66	5	p.	p.	NOUN
arestyrurj-208	66	6	acuta	acuta	NOUN
arestyrurj-208	66	7	samples	sample	NOUN
arestyrurj-208	66	8	,	,	PUNCT
arestyrurj-208	66	9	10	10	NUM
arestyrurj-208	66	10	were	be	AUX
arestyrurj-208	66	11	diploid	diploid	ADJ
arestyrurj-208	66	12	(	(	PUNCT
arestyrurj-208	66	13	d	d	NOUN
arestyrurj-208	66	14	)	)	PUNCT
arestyrurj-208	66	15	,	,	PUNCT
arestyrurj-208	66	16	9	9	NUM
arestyrurj-208	66	17	belonged	belong	VERB
arestyrurj-208	66	18	to	to	ADP
arestyrurj-208	66	19	triploid	triploid	PROPN
arestyrurj-208	66	20	cluster	cluster	NOUN
arestyrurj-208	66	21	1	1	NUM
arestyrurj-208	66	22	(	(	PUNCT
arestyrurj-208	66	23	t1	t1	NOUN
arestyrurj-208	66	24	)	)	PUNCT
arestyrurj-208	66	25	,	,	PUNCT
arestyrurj-208	66	26	and	and	CCONJ
arestyrurj-208	66	27	the	the	DET
arestyrurj-208	66	28	remaining	remain	VERB
arestyrurj-208	66	29	11	11	NUM
arestyrurj-208	66	30	were	be	AUX
arestyrurj-208	66	31	triploid	triploid	NOUN
arestyrurj-208	66	32	cluster	cluster	NOUN
arestyrurj-208	66	33	2	2	NUM
arestyrurj-208	66	34	(	(	PUNCT
arestyrurj-208	66	35	t2	t2	NOUN
arestyrurj-208	66	36	)	)	PUNCT
arestyrurj-208	66	37	.	.	PUNCT
arestyrurj-208	67	1	pairwise	pairwise	NOUN
arestyrurj-208	67	2	differential	differential	ADJ
arestyrurj-208	67	3	gene	gene	NOUN
arestyrurj-208	67	4	expression	expression	NOUN
arestyrurj-208	67	5	using	use	VERB
arestyrurj-208	67	6	r	r	NOUN
arestyrurj-208	67	7	for	for	ADP
arestyrurj-208	67	8	the	the	DET
arestyrurj-208	67	9	first	first	ADJ
arestyrurj-208	67	10	pairwise	pairwise	PROPN
arestyrurj-208	67	11	comparison	comparison	NOUN
arestyrurj-208	67	12	(	(	PUNCT
arestyrurj-208	67	13	t1	t1	NOUN
arestyrurj-208	67	14	vs.	vs.	NOUN
arestyrurj-208	67	15	d	d	PROPN
arestyrurj-208	67	16	)	)	PUNCT
arestyrurj-208	67	17	,	,	PUNCT
arestyrurj-208	67	18	1354	1354	NUM
arestyrurj-208	67	19	genes	gene	NOUN
arestyrurj-208	67	20	were	be	AUX
arestyrurj-208	67	21	upregulated	upregulate	VERB
arestyrurj-208	67	22	in	in	ADP
arestyrurj-208	67	23	t1	t1	PROPN
arestyrurj-208	67	24	,	,	PUNCT
arestyrurj-208	67	25	1,090	1,090	NUM
arestyrurj-208	67	26	were	be	AUX
arestyrurj-208	67	27	downregulated	downregulate	VERB
arestyrurj-208	67	28	in	in	ADP
arestyrurj-208	67	29	t1	t1	NOUN
arestyrurj-208	67	30	,	,	PUNCT
arestyrurj-208	67	31	and	and	CCONJ
arestyrurj-208	67	32	there	there	PRON
arestyrurj-208	67	33	was	be	VERB
arestyrurj-208	67	34	no	no	DET
arestyrurj-208	67	35	significant	significant	ADJ
arestyrurj-208	67	36	difference	difference	NOUN
arestyrurj-208	67	37	in	in	ADP
arestyrurj-208	67	38	expression	expression	NOUN
arestyrurj-208	67	39	for	for	ADP
arestyrurj-208	67	40	the	the	DET
arestyrurj-208	67	41	remaining	remain	VERB
arestyrurj-208	67	42	24,810	24,810	NUM
arestyrurj-208	67	43	genes	gene	NOUN
arestyrurj-208	67	44	.	.	PUNCT
arestyrurj-208	68	1	for	for	ADP
arestyrurj-208	68	2	the	the	DET
arestyrurj-208	68	3	second	second	ADJ
arestyrurj-208	68	4	pairwise	pairwise	NOUN
arestyrurj-208	68	5	comparison	comparison	NOUN
arestyrurj-208	68	6	(	(	PUNCT
arestyrurj-208	68	7	t2	t2	NOUN
arestyrurj-208	68	8	vs.	vs.	X
arestyrurj-208	68	9	d	d	PROPN
arestyrurj-208	68	10	)	)	PUNCT
arestyrurj-208	68	11	,	,	PUNCT
arestyrurj-208	68	12	1,157	1,157	NUM
arestyrurj-208	68	13	genes	gene	NOUN
arestyrurj-208	68	14	were	be	AUX
arestyrurj-208	68	15	upregulated	upregulate	VERB
arestyrurj-208	68	16	in	in	ADP
arestyrurj-208	68	17	t2	t2	NOUN
arestyrurj-208	68	18	,	,	PUNCT
arestyrurj-208	68	19	1,330	1,330	NUM
arestyrurj-208	68	20	were	be	AUX
arestyrurj-208	68	21	downregulated	downregulate	VERB
arestyrurj-208	68	22	in	in	ADP
arestyrurj-208	68	23	t2	t2	NOUN
arestyrurj-208	68	24	,	,	PUNCT
arestyrurj-208	68	25	and	and	CCONJ
arestyrurj-208	68	26	there	there	PRON
arestyrurj-208	68	27	was	be	VERB
arestyrurj-208	68	28	no	no	DET
arestyrurj-208	68	29	significant	significant	ADJ
arestyrurj-208	68	30	difference	difference	NOUN
arestyrurj-208	68	31	in	in	ADP
arestyrurj-208	68	32	expression	expression	NOUN
arestyrurj-208	68	33	for	for	ADP
arestyrurj-208	68	34	the	the	DET
arestyrurj-208	68	35	remaining	remain	VERB
arestyrurj-208	68	36	24,767	24,767	NUM
arestyrurj-208	68	37	genes	gene	NOUN
arestyrurj-208	68	38	.	.	PUNCT
arestyrurj-208	69	1	for	for	ADP
arestyrurj-208	69	2	the	the	DET
arestyrurj-208	69	3	third	third	ADJ
arestyrurj-208	69	4	and	and	CCONJ
arestyrurj-208	69	5	last	last	ADJ
arestyrurj-208	69	6	pairwise	pairwise	NOUN
arestyrurj-208	69	7	comparison	comparison	NOUN
arestyrurj-208	69	8	between	between	ADP
arestyrurj-208	69	9	the	the	DET
arestyrurj-208	69	10	two	two	NUM
arestyrurj-208	69	11	triploid	triploid	ADJ
arestyrurj-208	69	12	clusters	cluster	NOUN
arestyrurj-208	69	13	(	(	PUNCT
arestyrurj-208	69	14	t1	t1	NOUN
arestyrurj-208	69	15	vs.	vs.	ADP
arestyrurj-208	69	16	t2	t2	PROPN
arestyrurj-208	69	17	)	)	PUNCT
arestyrurj-208	69	18	,	,	PUNCT
arestyrurj-208	69	19	1,527	1,527	NUM
arestyrurj-208	69	20	genes	gene	NOUN
arestyrurj-208	69	21	were	be	AUX
arestyrurj-208	69	22	upregulated	upregulate	VERB
arestyrurj-208	69	23	in	in	ADP
arestyrurj-208	69	24	t1	t1	PROPN
arestyrurj-208	69	25	,	,	PUNCT
arestyrurj-208	69	26	985	985	NUM
arestyrurj-208	69	27	were	be	AUX
arestyrurj-208	69	28	downregulated	downregulate	VERB
arestyrurj-208	69	29	in	in	ADP
arestyrurj-208	69	30	t1	t1	NOUN
arestyrurj-208	69	31	,	,	PUNCT
arestyrurj-208	69	32	and	and	CCONJ
arestyrurj-208	69	33	there	there	PRON
arestyrurj-208	69	34	was	be	VERB
arestyrurj-208	69	35	no	no	DET
arestyrurj-208	69	36	significant	significant	ADJ
arestyrurj-208	69	37	difference	difference	NOUN
arestyrurj-208	69	38	in	in	ADP
arestyrurj-208	69	39	expression	expression	NOUN
arestyrurj-208	69	40	for	for	ADP
arestyrurj-208	69	41	the	the	DET
arestyrurj-208	69	42	remaining	remain	VERB
arestyrurj-208	69	43	24,742	24,742	NUM
arestyrurj-208	69	44	genes	gene	NOUN
arestyrurj-208	69	45	.	.	PUNCT
arestyrurj-208	70	1	this	this	DET
arestyrurj-208	70	2	information	information	NOUN
arestyrurj-208	70	3	is	be	AUX
arestyrurj-208	70	4	represented	represent	VERB
arestyrurj-208	70	5	in	in	ADP
arestyrurj-208	70	6	table	table	NOUN
arestyrurj-208	70	7	1	1	NUM
arestyrurj-208	70	8	.	.	PUNCT
arestyrurj-208	70	9	table	table	NOUN
arestyrurj-208	70	10	1	1	NUM
arestyrurj-208	70	11	:	:	PUNCT
arestyrurj-208	70	12	numbers	number	NOUN
arestyrurj-208	70	13	of	of	ADP
arestyrurj-208	70	14	differentially	differentially	ADV
arestyrurj-208	70	15	expressed	express	VERB
arestyrurj-208	70	16	genes	gene	NOUN
arestyrurj-208	70	17	in	in	ADP
arestyrurj-208	70	18	pairwise	pairwise	NOUN
arestyrurj-208	70	19	comparisons	comparison	NOUN
arestyrurj-208	70	20	using	use	VERB
arestyrurj-208	70	21	edger	edger	NOUN
arestyrurj-208	70	22	,	,	PUNCT
arestyrurj-208	70	23	with	with	ADP
arestyrurj-208	70	24	adjusted	adjust	VERB
arestyrurj-208	70	25	p	p	NOUN
arestyrurj-208	70	26	-	-	PUNCT
arestyrurj-208	70	27	value	value	NOUN
arestyrurj-208	70	28	<	<	NOUN
arestyrurj-208	70	29	0.05	0.05	NUM
arestyrurj-208	70	30	,	,	PUNCT
arestyrurj-208	70	31	and	and	CCONJ
arestyrurj-208	70	32	fold	fold	ADJ
arestyrurj-208	70	33	change	change	NOUN
arestyrurj-208	70	34	(	(	PUNCT
arestyrurj-208	70	35	fc	fc	INTJ
arestyrurj-208	70	36	)	)	PUNCT
arestyrurj-208	70	37	>	>	X
arestyrurj-208	70	38	1	1	NUM
arestyrurj-208	70	39	for	for	ADP
arestyrurj-208	70	40	upregulated	upregulated	ADJ
arestyrurj-208	70	41	genes	gene	NOUN
arestyrurj-208	70	42	and	and	CCONJ
arestyrurj-208	70	43	fc	fc	PROPN
arestyrurj-208	70	44	<	<	X
arestyrurj-208	70	45	-1	-1	X
arestyrurj-208	70	46	for	for	ADP
arestyrurj-208	70	47	downregulated	downregulate	VERB
arestyrurj-208	70	48	genes	gene	NOUN
arestyrurj-208	70	49	.	.	PUNCT
arestyrurj-208	71	1	an	an	DET
arestyrurj-208	71	2	upset	upset	ADJ
arestyrurj-208	71	3	plot	plot	NOUN
arestyrurj-208	71	4	is	be	AUX
arestyrurj-208	71	5	a	a	DET
arestyrurj-208	71	6	graph	graph	NOUN
arestyrurj-208	71	7	used	use	VERB
arestyrurj-208	71	8	to	to	PART
arestyrurj-208	71	9	represent	represent	VERB
arestyrurj-208	71	10	intersections	intersection	NOUN
arestyrurj-208	71	11	of	of	ADP
arestyrurj-208	71	12	two	two	NUM
arestyrurj-208	71	13	or	or	CCONJ
arestyrurj-208	71	14	more	more	ADJ
arestyrurj-208	71	15	categories	category	NOUN
arestyrurj-208	71	16	that	that	PRON
arestyrurj-208	71	17	have	have	VERB
arestyrurj-208	71	18	some	some	DET
arestyrurj-208	71	19	shared	share	VERB
arestyrurj-208	71	20	similarity	similarity	NOUN
arestyrurj-208	71	21	(	(	PUNCT
arestyrurj-208	71	22	conway	conway	PROPN
arestyrurj-208	71	23	et	et	PROPN
arestyrurj-208	71	24	al	al	PROPN
arestyrurj-208	71	25	.	.	PROPN
arestyrurj-208	71	26	2017	2017	NUM
arestyrurj-208	71	27	)	)	PUNCT
arestyrurj-208	71	28	.	.	PUNCT
arestyrurj-208	72	1	for	for	ADP
arestyrurj-208	72	2	this	this	DET
arestyrurj-208	72	3	study	study	NOUN
arestyrurj-208	72	4	,	,	PUNCT
arestyrurj-208	72	5	an	an	DET
arestyrurj-208	72	6	upset	upset	ADJ
arestyrurj-208	72	7	plot	plot	NOUN
arestyrurj-208	72	8	was	be	AUX
arestyrurj-208	72	9	used	use	VERB
arestyrurj-208	72	10	to	to	PART
arestyrurj-208	72	11	visualize	visualize	VERB
arestyrurj-208	72	12	the	the	DET
arestyrurj-208	72	13	degs	deg	NOUN
arestyrurj-208	72	14	similarly	similarly	ADV
arestyrurj-208	72	15	regulated	regulate	VERB
arestyrurj-208	72	16	across	across	ADP
arestyrurj-208	72	17	pairwise	pairwise	NOUN
arestyrurj-208	72	18	comparisons	comparison	NOUN
arestyrurj-208	72	19	.	.	PUNCT
arestyrurj-208	73	1	pairwise	pairwise	NOUN
arestyrurj-208	73	2	comparison	comparison	NOUN
arestyrurj-208	73	3	upregulated	upregulate	VERB
arestyrurj-208	73	4	(	(	PUNCT
arestyrurj-208	73	5	log(fc)>1	log(fc)>1	NOUN
arestyrurj-208	73	6	)	)	PUNCT
arestyrurj-208	73	7	downregulated	downregulate	VERB
arestyrurj-208	73	8	(	(	PUNCT
arestyrurj-208	73	9	log(fc)<1	log(fc)<1	PROPN
arestyrurj-208	73	10	)	)	PUNCT
arestyrurj-208	73	11	t1	t1	NOUN
arestyrurj-208	73	12	vs.	vs.	ADP
arestyrurj-208	73	13	d	d	PROPN
arestyrurj-208	73	14	1354	1354	NUM
arestyrurj-208	73	15	1090	1090	NUM
arestyrurj-208	73	16	t2	t2	NOUN
arestyrurj-208	73	17	vs.	vs.	ADP
arestyrurj-208	73	18	d	d	PROPN
arestyrurj-208	73	19	1157	1157	NUM
arestyrurj-208	73	20	1330	1330	NUM
arestyrurj-208	73	21	t1	t1	NOUN
arestyrurj-208	73	22	vs.	vs.	ADP
arestyrurj-208	73	23	t2	t2	PROPN
arestyrurj-208	73	24	1527	1527	NUM
arestyrurj-208	73	25	985	985	NUM
arestyrurj-208	73	26	aresty	aresty	ADJ
arestyrurj-208	73	27	rutgers	rutgers	PROPN
arestyrurj-208	73	28	undergraduate	undergraduate	PROPN
arestyrurj-208	73	29	research	research	PROPN
arestyrurj-208	73	30	journal	journal	PROPN
arestyrurj-208	73	31	,	,	PUNCT
arestyrurj-208	73	32	volume	volume	NOUN
arestyrurj-208	73	33	i	i	PRON
arestyrurj-208	73	34	,	,	PUNCT
arestyrurj-208	73	35	issue	issue	VERB
arestyrurj-208	73	36	iv	iv	NUM
arestyrurj-208	73	37	figure	figure	NOUN
arestyrurj-208	73	38	1	1	NUM
arestyrurj-208	73	39	:	:	PUNCT
arestyrurj-208	73	40	upset	upset	ADJ
arestyrurj-208	73	41	plot	plot	NOUN
arestyrurj-208	73	42	of	of	ADP
arestyrurj-208	73	43	differentially	differentially	ADV
arestyrurj-208	73	44	expressed	express	VERB
arestyrurj-208	73	45	genes	gene	NOUN
arestyrurj-208	73	46	in	in	ADP
arestyrurj-208	73	47	pairwise	pairwise	NOUN
arestyrurj-208	73	48	comparisons	comparison	NOUN
arestyrurj-208	73	49	between	between	ADP
arestyrurj-208	73	50	t1	t1	PROPN
arestyrurj-208	73	51	,	,	PUNCT
arestyrurj-208	73	52	t2	t2	NOUN
arestyrurj-208	73	53	,	,	PUNCT
arestyrurj-208	73	54	and	and	CCONJ
arestyrurj-208	73	55	d	d	ADP
arestyrurj-208	73	56	samples	sample	NOUN
arestyrurj-208	73	57	.	.	PUNCT
arestyrurj-208	74	1	the	the	DET
arestyrurj-208	74	2	violet	violet	PROPN
arestyrurj-208	74	3	histogram	histogram	NOUN
arestyrurj-208	74	4	on	on	ADP
arestyrurj-208	74	5	the	the	DET
arestyrurj-208	74	6	bottom	bottom	ADJ
arestyrurj-208	74	7	left	left	NOUN
arestyrurj-208	74	8	of	of	ADP
arestyrurj-208	74	9	the	the	DET
arestyrurj-208	74	10	figure	figure	NOUN
arestyrurj-208	74	11	represents	represent	VERB
arestyrurj-208	74	12	the	the	DET
arestyrurj-208	74	13	number	number	NOUN
arestyrurj-208	74	14	of	of	ADP
arestyrurj-208	74	15	degs	deg	NOUN
arestyrurj-208	74	16	in	in	ADP
arestyrurj-208	74	17	each	each	DET
arestyrurj-208	74	18	category	category	NOUN
arestyrurj-208	74	19	of	of	ADP
arestyrurj-208	74	20	the	the	DET
arestyrurj-208	74	21	pairwise	pairwise	NOUN
arestyrurj-208	74	22	comparisons	comparison	NOUN
arestyrurj-208	74	23	.	.	PUNCT
arestyrurj-208	75	1	the	the	DET
arestyrurj-208	75	2	black	black	ADJ
arestyrurj-208	75	3	histogram	histogram	NOUN
arestyrurj-208	75	4	represents	represent	VERB
arestyrurj-208	75	5	the	the	DET
arestyrurj-208	75	6	number	number	NOUN
arestyrurj-208	75	7	of	of	ADP
arestyrurj-208	75	8	degs	deg	NOUN
arestyrurj-208	75	9	common	common	ADJ
arestyrurj-208	75	10	between	between	ADP
arestyrurj-208	75	11	the	the	DET
arestyrurj-208	75	12	highlighted	highlight	VERB
arestyrurj-208	75	13	pairwise	pairwise	NOUN
arestyrurj-208	75	14	comparisons	comparison	NOUN
arestyrurj-208	75	15	(	(	PUNCT
arestyrurj-208	75	16	exact	exact	ADJ
arestyrurj-208	75	17	count	count	NOUN
arestyrurj-208	75	18	shown	show	VERB
arestyrurj-208	75	19	on	on	ADP
arestyrurj-208	75	20	top	top	NOUN
arestyrurj-208	75	21	of	of	ADP
arestyrurj-208	75	22	each	each	DET
arestyrurj-208	75	23	black	black	ADJ
arestyrurj-208	75	24	bar	bar	NOUN
arestyrurj-208	75	25	)	)	PUNCT
arestyrurj-208	75	26	.	.	PUNCT
arestyrurj-208	76	1	for	for	ADP
arestyrurj-208	76	2	the	the	DET
arestyrurj-208	76	3	black	black	ADJ
arestyrurj-208	76	4	bars	bar	NOUN
arestyrurj-208	76	5	with	with	ADP
arestyrurj-208	76	6	a	a	DET
arestyrurj-208	76	7	single	single	ADJ
arestyrurj-208	76	8	dot	dot	NOUN
arestyrurj-208	76	9	across	across	ADP
arestyrurj-208	76	10	all	all	DET
arestyrurj-208	76	11	sets	set	NOUN
arestyrurj-208	76	12	,	,	PUNCT
arestyrurj-208	76	13	there	there	PRON
arestyrurj-208	76	14	is	be	VERB
arestyrurj-208	76	15	no	no	DET
arestyrurj-208	76	16	overlap	overlap	NOUN
arestyrurj-208	76	17	of	of	ADP
arestyrurj-208	76	18	differentially	differentially	ADV
arestyrurj-208	76	19	expressed	express	VERB
arestyrurj-208	76	20	genes	gene	NOUN
arestyrurj-208	76	21	with	with	ADP
arestyrurj-208	76	22	other	other	ADJ
arestyrurj-208	76	23	categories	category	NOUN
arestyrurj-208	76	24	.	.	PUNCT
arestyrurj-208	77	1	954	954	NUM
arestyrurj-208	77	2	out	out	ADP
arestyrurj-208	77	3	of	of	ADP
arestyrurj-208	77	4	the	the	DET
arestyrurj-208	77	5	1,330	1,330	NUM
arestyrurj-208	77	6	genes	gene	NOUN
arestyrurj-208	77	7	downregulated	downregulate	VERB
arestyrurj-208	77	8	in	in	ADP
arestyrurj-208	77	9	t2	t2	NOUN
arestyrurj-208	77	10	(	(	PUNCT
arestyrurj-208	77	11	versus	versus	ADP
arestyrurj-208	77	12	d	d	NOUN
arestyrurj-208	77	13	)	)	PUNCT
arestyrurj-208	77	14	were	be	AUX
arestyrurj-208	77	15	also	also	ADV
arestyrurj-208	77	16	upregulated	upregulate	VERB
arestyrurj-208	77	17	in	in	ADP
arestyrurj-208	77	18	t1	t1	PROPN
arestyrurj-208	77	19	(	(	PUNCT
arestyrurj-208	77	20	versus	versus	ADP
arestyrurj-208	77	21	t2	t2	NOUN
arestyrurj-208	77	22	)	)	PUNCT
arestyrurj-208	77	23	.	.	PUNCT
arestyrurj-208	78	1	the	the	DET
arestyrurj-208	78	2	second	second	ADV
arestyrurj-208	78	3	largest	large	ADJ
arestyrurj-208	78	4	set	set	NOUN
arestyrurj-208	78	5	of	of	ADP
arestyrurj-208	78	6	intersecting	intersecting	ADJ
arestyrurj-208	78	7	genes	gene	NOUN
arestyrurj-208	78	8	consisted	consist	VERB
arestyrurj-208	78	9	of	of	ADP
arestyrurj-208	78	10	856	856	NUM
arestyrurj-208	78	11	genes	gene	NOUN
arestyrurj-208	78	12	that	that	PRON
arestyrurj-208	78	13	were	be	AUX
arestyrurj-208	78	14	upregulated	upregulate	VERB
arestyrurj-208	78	15	in	in	ADP
arestyrurj-208	78	16	both	both	DET
arestyrurj-208	78	17	triploid	triploid	ADJ
arestyrurj-208	78	18	clusters	cluster	NOUN
arestyrurj-208	78	19	against	against	ADP
arestyrurj-208	78	20	diploid	diploid	ADJ
arestyrurj-208	78	21	samples	sample	NOUN
arestyrurj-208	78	22	.	.	PUNCT
arestyrurj-208	79	1	in	in	ADP
arestyrurj-208	79	2	contrast	contrast	NOUN
arestyrurj-208	79	3	,	,	PUNCT
arestyrurj-208	79	4	only	only	ADV
arestyrurj-208	79	5	439	439	NUM
arestyrurj-208	79	6	genes	gene	NOUN
arestyrurj-208	79	7	were	be	AUX
arestyrurj-208	79	8	downregulated	downregulate	VERB
arestyrurj-208	79	9	in	in	ADP
arestyrurj-208	79	10	both	both	DET
arestyrurj-208	79	11	triploid	triploid	ADJ
arestyrurj-208	79	12	clusters	cluster	NOUN
arestyrurj-208	79	13	against	against	ADP
arestyrurj-208	79	14	diploid	diploid	ADJ
arestyrurj-208	79	15	samples	sample	NOUN
arestyrurj-208	79	16	.	.	PUNCT
arestyrurj-208	80	1	other	other	ADJ
arestyrurj-208	80	2	intersecting	intersecting	ADJ
arestyrurj-208	80	3	sets	set	NOUN
arestyrurj-208	80	4	of	of	ADP
arestyrurj-208	80	5	genes	gene	NOUN
arestyrurj-208	80	6	are	be	AUX
arestyrurj-208	80	7	shown	show	VERB
arestyrurj-208	80	8	in	in	ADP
arestyrurj-208	80	9	the	the	DET
arestyrurj-208	80	10	upset	upset	ADJ
arestyrurj-208	80	11	plot	plot	NOUN
arestyrurj-208	80	12	above	above	ADP
arestyrurj-208	80	13	(	(	PUNCT
arestyrurj-208	80	14	figure1	figure1	PROPN
arestyrurj-208	80	15	)	)	PUNCT
arestyrurj-208	80	16	.	.	PUNCT
arestyrurj-208	81	1	4	4	NUM
arestyrurj-208	81	2	discussion	discussion	NOUN
arestyrurj-208	81	3	/	/	SYM
arestyrurj-208	81	4	conclusion	conclusion	NOUN
arestyrurj-208	81	5	differential	differential	ADJ
arestyrurj-208	81	6	gene	gene	NOUN
arestyrurj-208	81	7	expression	expression	NOUN
arestyrurj-208	81	8	analysis	analysis	NOUN
arestyrurj-208	81	9	the	the	DET
arestyrurj-208	81	10	aim	aim	NOUN
arestyrurj-208	81	11	of	of	ADP
arestyrurj-208	81	12	this	this	DET
arestyrurj-208	81	13	study	study	NOUN
arestyrurj-208	81	14	was	be	AUX
arestyrurj-208	81	15	to	to	PART
arestyrurj-208	81	16	analyze	analyze	VERB
arestyrurj-208	81	17	the	the	DET
arestyrurj-208	81	18	differential	differential	ADJ
arestyrurj-208	81	19	expression	expression	NOUN
arestyrurj-208	81	20	of	of	ADP
arestyrurj-208	81	21	genes	gene	NOUN
arestyrurj-208	81	22	in	in	ADP
arestyrurj-208	81	23	t1	t1	NOUN
arestyrurj-208	81	24	,	,	PUNCT
arestyrurj-208	81	25	t2	t2	NOUN
arestyrurj-208	81	26	,	,	PUNCT
arestyrurj-208	81	27	and	and	CCONJ
arestyrurj-208	81	28	d	d	NOUN
arestyrurj-208	81	29	and	and	CCONJ
arestyrurj-208	81	30	to	to	PART
arestyrurj-208	81	31	identify	identify	VERB
arestyrurj-208	81	32	the	the	DET
arestyrurj-208	81	33	physiological	physiological	ADJ
arestyrurj-208	81	34	differences	difference	NOUN
arestyrurj-208	81	35	conferred	confer	VERB
arestyrurj-208	81	36	by	by	ADP
arestyrurj-208	81	37	triploidy	triploidy	NOUN
arestyrurj-208	81	38	.	.	PUNCT
arestyrurj-208	82	1	deseq2	deseq2	PROPN
arestyrurj-208	82	2	was	be	AUX
arestyrurj-208	82	3	used	use	VERB
arestyrurj-208	82	4	to	to	PART
arestyrurj-208	82	5	find	find	VERB
arestyrurj-208	82	6	the	the	DET
arestyrurj-208	82	7	differentially	differentially	ADV
arestyrurj-208	82	8	expressed	express	VERB
arestyrurj-208	82	9	genes	gene	NOUN
arestyrurj-208	82	10	and	and	CCONJ
arestyrurj-208	82	11	diamond	diamond	NOUN
arestyrurj-208	82	12	,	,	PUNCT
arestyrurj-208	82	13	interproscan	interproscan	NOUN
arestyrurj-208	82	14	,	,	PUNCT
arestyrurj-208	82	15	and	and	CCONJ
arestyrurj-208	82	16	blast2go	blast2go	NOUN
arestyrurj-208	82	17	were	be	AUX
arestyrurj-208	82	18	used	use	VERB
arestyrurj-208	82	19	for	for	ADP
arestyrurj-208	82	20	gene	gene	NOUN
arestyrurj-208	82	21	ontology	ontology	NOUN
arestyrurj-208	82	22	and	and	CCONJ
arestyrurj-208	82	23	annotaaresty	annotaaresty	ADJ
arestyrurj-208	82	24	rutgers	rutgers	PROPN
arestyrurj-208	82	25	undergraduate	undergraduate	PROPN
arestyrurj-208	82	26	research	research	PROPN
arestyrurj-208	82	27	journal	journal	PROPN
arestyrurj-208	82	28	,	,	PUNCT
arestyrurj-208	82	29	volume	volume	NOUN
arestyrurj-208	82	30	i	i	PRON
arestyrurj-208	82	31	,	,	PUNCT
arestyrurj-208	82	32	issue	issue	NOUN
arestyrurj-208	82	33	iv	iv	NUM
arestyrurj-208	82	34	tion	tion	NOUN
arestyrurj-208	82	35	of	of	ADP
arestyrurj-208	82	36	the	the	DET
arestyrurj-208	82	37	degs	deg	NOUN
arestyrurj-208	82	38	.	.	PUNCT
arestyrurj-208	83	1	while	while	SCONJ
arestyrurj-208	83	2	there	there	PRON
arestyrurj-208	83	3	were	be	VERB
arestyrurj-208	83	4	many	many	ADJ
arestyrurj-208	83	5	genes	gene	NOUN
arestyrurj-208	83	6	exhibiting	exhibit	VERB
arestyrurj-208	83	7	similar	similar	ADJ
arestyrurj-208	83	8	expression	expression	NOUN
arestyrurj-208	83	9	patterns	pattern	NOUN
arestyrurj-208	83	10	for	for	ADP
arestyrurj-208	83	11	the	the	DET
arestyrurj-208	83	12	two	two	NUM
arestyrurj-208	83	13	triploid	triploid	ADJ
arestyrurj-208	83	14	clusters	cluster	NOUN
arestyrurj-208	83	15	,	,	PUNCT
arestyrurj-208	83	16	there	there	PRON
arestyrurj-208	83	17	were	be	VERB
arestyrurj-208	83	18	also	also	ADV
arestyrurj-208	83	19	many	many	ADJ
arestyrurj-208	83	20	differences	difference	NOUN
arestyrurj-208	83	21	.	.	PUNCT
arestyrurj-208	84	1	the	the	DET
arestyrurj-208	84	2	number	number	NOUN
arestyrurj-208	84	3	of	of	ADP
arestyrurj-208	84	4	differentially	differentially	ADV
arestyrurj-208	84	5	regulated	regulate	VERB
arestyrurj-208	84	6	genes	gene	NOUN
arestyrurj-208	84	7	for	for	ADP
arestyrurj-208	84	8	each	each	DET
arestyrurj-208	84	9	triploid	triploid	NOUN
arestyrurj-208	84	10	cluster	cluster	NOUN
arestyrurj-208	84	11	is	be	AUX
arestyrurj-208	84	12	different	different	ADJ
arestyrurj-208	84	13	when	when	SCONJ
arestyrurj-208	84	14	compared	compare	VERB
arestyrurj-208	84	15	to	to	ADP
arestyrurj-208	84	16	each	each	DET
arestyrurj-208	84	17	other	other	ADJ
arestyrurj-208	84	18	and	and	CCONJ
arestyrurj-208	84	19	to	to	ADP
arestyrurj-208	84	20	diploid	diploid	ADJ
arestyrurj-208	84	21	samples	sample	NOUN
arestyrurj-208	84	22	.	.	PUNCT
arestyrurj-208	85	1	the	the	DET
arestyrurj-208	85	2	downregulated	downregulate	VERB
arestyrurj-208	85	3	genes	gene	NOUN
arestyrurj-208	85	4	in	in	ADP
arestyrurj-208	85	5	t1	t1	NOUN
arestyrurj-208	85	6	and	and	CCONJ
arestyrurj-208	85	7	t2	t2	NOUN
arestyrurj-208	85	8	with	with	ADP
arestyrurj-208	85	9	log(fc	log(fc	PROPN
arestyrurj-208	85	10	)	)	PUNCT
arestyrurj-208	85	11	<	<	X
arestyrurj-208	85	12	-1	-1	PUNCT
arestyrurj-208	85	13	and	and	CCONJ
arestyrurj-208	85	14	adjusted	adjusted	ADJ
arestyrurj-208	85	15	pvalue	pvalue	NOUN
arestyrurj-208	85	16	<	<	X
arestyrurj-208	85	17	0.05	0.05	NUM
arestyrurj-208	85	18	exhibit	exhibit	NOUN
arestyrurj-208	85	19	interesting	interesting	ADJ
arestyrurj-208	85	20	differences	difference	NOUN
arestyrurj-208	85	21	in	in	ADP
arestyrurj-208	85	22	gene	gene	NOUN
arestyrurj-208	85	23	expression	expression	NOUN
arestyrurj-208	85	24	.	.	PUNCT
arestyrurj-208	86	1	although	although	SCONJ
arestyrurj-208	86	2	both	both	PRON
arestyrurj-208	86	3	t1	t1	NOUN
arestyrurj-208	86	4	and	and	CCONJ
arestyrurj-208	86	5	t2	t2	NOUN
arestyrurj-208	86	6	clusters	cluster	NOUN
arestyrurj-208	86	7	are	be	AUX
arestyrurj-208	86	8	triploid	triploid	ADJ
arestyrurj-208	86	9	,	,	PUNCT
arestyrurj-208	86	10	the	the	DET
arestyrurj-208	86	11	upset	upset	ADJ
arestyrurj-208	86	12	plot	plot	NOUN
arestyrurj-208	86	13	(	(	PUNCT
arestyrurj-208	86	14	figure	figure	NOUN
arestyrurj-208	86	15	1	1	NUM
arestyrurj-208	86	16	)	)	PUNCT
arestyrurj-208	86	17	indicates	indicate	VERB
arestyrurj-208	86	18	that	that	SCONJ
arestyrurj-208	86	19	the	the	DET
arestyrurj-208	86	20	genes	gene	NOUN
arestyrurj-208	86	21	differentially	differentially	ADV
arestyrurj-208	86	22	expressed	express	VERB
arestyrurj-208	86	23	in	in	ADP
arestyrurj-208	86	24	both	both	DET
arestyrurj-208	86	25	clusters	cluster	NOUN
arestyrurj-208	86	26	show	show	VERB
arestyrurj-208	86	27	differences	difference	NOUN
arestyrurj-208	86	28	in	in	ADP
arestyrurj-208	86	29	gene	gene	NOUN
arestyrurj-208	86	30	regulation	regulation	NOUN
arestyrurj-208	86	31	.	.	PUNCT
arestyrurj-208	87	1	954	954	NUM
arestyrurj-208	87	2	genes	gene	NOUN
arestyrurj-208	87	3	downregulated	downregulate	VERB
arestyrurj-208	87	4	in	in	ADP
arestyrurj-208	87	5	t2	t2	NOUN
arestyrurj-208	87	6	in	in	ADP
arestyrurj-208	87	7	comparison	comparison	NOUN
arestyrurj-208	87	8	to	to	ADP
arestyrurj-208	87	9	diploid	diploid	ADJ
arestyrurj-208	87	10	samples	sample	NOUN
arestyrurj-208	87	11	are	be	AUX
arestyrurj-208	87	12	upregulated	upregulate	VERB
arestyrurj-208	87	13	in	in	ADP
arestyrurj-208	87	14	t1	t1	NOUN
arestyrurj-208	87	15	compared	compare	VERB
arestyrurj-208	87	16	to	to	ADP
arestyrurj-208	87	17	t2	t2	NOUN
arestyrurj-208	87	18	and	and	CCONJ
arestyrurj-208	87	19	are	be	AUX
arestyrurj-208	87	20	not	not	PART
arestyrurj-208	87	21	differentially	differentially	ADV
arestyrurj-208	87	22	expressed	express	VERB
arestyrurj-208	87	23	in	in	ADP
arestyrurj-208	87	24	t1	t1	NOUN
arestyrurj-208	87	25	compared	compare	VERB
arestyrurj-208	87	26	to	to	ADP
arestyrurj-208	87	27	d.	d.	PROPN
arestyrurj-208	87	28	this	this	PRON
arestyrurj-208	87	29	indicates	indicate	VERB
arestyrurj-208	87	30	that	that	SCONJ
arestyrurj-208	87	31	these	these	DET
arestyrurj-208	87	32	954	954	NUM
arestyrurj-208	87	33	genes	gene	NOUN
arestyrurj-208	87	34	may	may	AUX
arestyrurj-208	87	35	be	be	AUX
arestyrurj-208	87	36	downregulated	downregulate	VERB
arestyrurj-208	87	37	only	only	ADV
arestyrurj-208	87	38	in	in	ADP
arestyrurj-208	87	39	t2	t2	NOUN
arestyrurj-208	87	40	and	and	CCONJ
arestyrurj-208	87	41	not	not	PART
arestyrurj-208	87	42	t1	t1	NOUN
arestyrurj-208	87	43	.	.	PUNCT
arestyrurj-208	88	1	similarly	similarly	ADV
arestyrurj-208	88	2	,	,	PUNCT
arestyrurj-208	88	3	there	there	PRON
arestyrurj-208	88	4	are	be	VERB
arestyrurj-208	88	5	419	419	NUM
arestyrurj-208	88	6	degs	deg	NOUN
arestyrurj-208	88	7	that	that	PRON
arestyrurj-208	88	8	are	be	AUX
arestyrurj-208	88	9	only	only	ADV
arestyrurj-208	88	10	downregulated	downregulate	VERB
arestyrurj-208	88	11	in	in	ADP
arestyrurj-208	88	12	t1	t1	NOUN
arestyrurj-208	88	13	and	and	CCONJ
arestyrurj-208	88	14	414	414	NUM
arestyrurj-208	88	15	degs	deg	NOUN
arestyrurj-208	88	16	downregulated	downregulate	VERB
arestyrurj-208	88	17	in	in	ADP
arestyrurj-208	88	18	t2	t2	NOUN
arestyrurj-208	88	19	that	that	PRON
arestyrurj-208	88	20	have	have	VERB
arestyrurj-208	88	21	no	no	DET
arestyrurj-208	88	22	intersections	intersection	NOUN
arestyrurj-208	88	23	with	with	ADP
arestyrurj-208	88	24	the	the	DET
arestyrurj-208	88	25	other	other	ADJ
arestyrurj-208	88	26	triploid	triploid	ADJ
arestyrurj-208	88	27	cluster	cluster	NOUN
arestyrurj-208	88	28	across	across	ADP
arestyrurj-208	88	29	all	all	DET
arestyrurj-208	88	30	comparisons	comparison	NOUN
arestyrurj-208	88	31	.	.	PUNCT
arestyrurj-208	89	1	however	however	ADV
arestyrurj-208	89	2	,	,	PUNCT
arestyrurj-208	89	3	there	there	PRON
arestyrurj-208	89	4	are	be	VERB
arestyrurj-208	89	5	439	439	NUM
arestyrurj-208	89	6	degs	deg	NOUN
arestyrurj-208	89	7	that	that	PRON
arestyrurj-208	89	8	are	be	AUX
arestyrurj-208	89	9	downregulated	downregulate	VERB
arestyrurj-208	89	10	in	in	ADP
arestyrurj-208	89	11	both	both	PRON
arestyrurj-208	89	12	t1	t1	NOUN
arestyrurj-208	89	13	and	and	CCONJ
arestyrurj-208	89	14	t2	t2	NOUN
arestyrurj-208	89	15	against	against	ADP
arestyrurj-208	89	16	d.	d.	NOUN
arestyrurj-208	89	17	these	these	DET
arestyrurj-208	89	18	genes	gene	NOUN
arestyrurj-208	89	19	depict	depict	VERB
arestyrurj-208	89	20	no	no	DET
arestyrurj-208	89	21	significant	significant	ADJ
arestyrurj-208	89	22	differential	differential	ADJ
arestyrurj-208	89	23	expression	expression	NOUN
arestyrurj-208	89	24	in	in	ADP
arestyrurj-208	89	25	the	the	DET
arestyrurj-208	89	26	pairwise	pairwise	NOUN
arestyrurj-208	89	27	comparison	comparison	NOUN
arestyrurj-208	89	28	between	between	ADP
arestyrurj-208	89	29	t1	t1	NOUN
arestyrurj-208	89	30	and	and	CCONJ
arestyrurj-208	89	31	t2	t2	NOUN
arestyrurj-208	89	32	.	.	PUNCT
arestyrurj-208	90	1	hence	hence	ADV
arestyrurj-208	90	2	,	,	PUNCT
arestyrurj-208	90	3	while	while	SCONJ
arestyrurj-208	90	4	there	there	PRON
arestyrurj-208	90	5	are	be	VERB
arestyrurj-208	90	6	a	a	DET
arestyrurj-208	90	7	significant	significant	ADJ
arestyrurj-208	90	8	number	number	NOUN
arestyrurj-208	90	9	of	of	ADP
arestyrurj-208	90	10	genes	gene	NOUN
arestyrurj-208	90	11	that	that	PRON
arestyrurj-208	90	12	are	be	AUX
arestyrurj-208	90	13	exclusively	exclusively	ADV
arestyrurj-208	90	14	downregulated	downregulate	VERB
arestyrurj-208	90	15	within	within	ADP
arestyrurj-208	90	16	each	each	DET
arestyrurj-208	90	17	triploid	triploid	ADJ
arestyrurj-208	90	18	cluster	cluster	NOUN
arestyrurj-208	90	19	,	,	PUNCT
arestyrurj-208	90	20	some	some	PRON
arestyrurj-208	90	21	are	be	AUX
arestyrurj-208	90	22	common	common	ADJ
arestyrurj-208	90	23	between	between	ADP
arestyrurj-208	90	24	the	the	DET
arestyrurj-208	90	25	two	two	NUM
arestyrurj-208	90	26	clusters	cluster	NOUN
arestyrurj-208	90	27	as	as	ADV
arestyrurj-208	90	28	well	well	ADV
arestyrurj-208	90	29	.	.	PUNCT
arestyrurj-208	91	1	this	this	PRON
arestyrurj-208	91	2	indicates	indicate	VERB
arestyrurj-208	91	3	that	that	SCONJ
arestyrurj-208	91	4	although	although	SCONJ
arestyrurj-208	91	5	both	both	PRON
arestyrurj-208	91	6	t1	t1	NOUN
arestyrurj-208	91	7	and	and	CCONJ
arestyrurj-208	91	8	t2	t2	NOUN
arestyrurj-208	91	9	are	be	AUX
arestyrurj-208	91	10	triploid	triploid	ADJ
arestyrurj-208	91	11	,	,	PUNCT
arestyrurj-208	91	12	there	there	PRON
arestyrurj-208	91	13	are	be	VERB
arestyrurj-208	91	14	a	a	DET
arestyrurj-208	91	15	large	large	ADJ
arestyrurj-208	91	16	number	number	NOUN
arestyrurj-208	91	17	of	of	ADP
arestyrurj-208	91	18	differences	difference	NOUN
arestyrurj-208	91	19	and	and	CCONJ
arestyrurj-208	91	20	similarities	similarity	NOUN
arestyrurj-208	91	21	in	in	ADP
arestyrurj-208	91	22	gene	gene	NOUN
arestyrurj-208	91	23	expression	expression	NOUN
arestyrurj-208	91	24	patterns	pattern	NOUN
arestyrurj-208	91	25	.	.	PUNCT
arestyrurj-208	92	1	this	this	DET
arestyrurj-208	92	2	analysis	analysis	NOUN
arestyrurj-208	92	3	is	be	AUX
arestyrurj-208	92	4	supported	support	VERB
arestyrurj-208	92	5	by	by	ADP
arestyrurj-208	92	6	the	the	DET
arestyrurj-208	92	7	differential	differential	ADJ
arestyrurj-208	92	8	expression	expression	NOUN
arestyrurj-208	92	9	patterns	pattern	NOUN
arestyrurj-208	92	10	for	for	ADP
arestyrurj-208	92	11	upregulated	upregulated	ADJ
arestyrurj-208	92	12	genes	gene	NOUN
arestyrurj-208	92	13	as	as	ADV
arestyrurj-208	92	14	well	well	ADV
arestyrurj-208	92	15	.	.	PUNCT
arestyrurj-208	93	1	notably	notably	ADV
arestyrurj-208	93	2	,	,	PUNCT
arestyrurj-208	93	3	331	331	NUM
arestyrurj-208	93	4	genes	gene	NOUN
arestyrurj-208	93	5	upregulated	upregulate	VERB
arestyrurj-208	93	6	in	in	ADP
arestyrurj-208	93	7	t2	t2	NOUN
arestyrurj-208	93	8	against	against	ADP
arestyrurj-208	93	9	d	d	PROPN
arestyrurj-208	93	10	are	be	AUX
arestyrurj-208	93	11	downregulated	downregulate	VERB
arestyrurj-208	93	12	in	in	ADP
arestyrurj-208	93	13	t1	t1	NOUN
arestyrurj-208	93	14	against	against	ADP
arestyrurj-208	93	15	t2	t2	NOUN
arestyrurj-208	93	16	.	.	PUNCT
arestyrurj-208	94	1	these	these	DET
arestyrurj-208	94	2	genes	gene	NOUN
arestyrurj-208	94	3	may	may	AUX
arestyrurj-208	94	4	be	be	AUX
arestyrurj-208	94	5	only	only	ADV
arestyrurj-208	94	6	upregulated	upregulate	VERB
arestyrurj-208	94	7	in	in	ADP
arestyrurj-208	94	8	t2	t2	NOUN
arestyrurj-208	94	9	.	.	PUNCT
arestyrurj-208	95	1	there	there	PRON
arestyrurj-208	95	2	are	be	VERB
arestyrurj-208	95	3	402	402	NUM
arestyrurj-208	95	4	upregulated	upregulated	ADJ
arestyrurj-208	95	5	genes	gene	NOUN
arestyrurj-208	95	6	in	in	ADP
arestyrurj-208	95	7	t2	t2	NOUN
arestyrurj-208	95	8	that	that	PRON
arestyrurj-208	95	9	are	be	AUX
arestyrurj-208	95	10	not	not	PART
arestyrurj-208	95	11	differentially	differentially	ADV
arestyrurj-208	95	12	expressed	express	VERB
arestyrurj-208	95	13	in	in	ADP
arestyrurj-208	95	14	t1	t1	NOUN
arestyrurj-208	95	15	and	and	CCONJ
arestyrurj-208	95	16	399	399	NUM
arestyrurj-208	95	17	genes	gene	NOUN
arestyrurj-208	95	18	upregulated	upregulate	VERB
arestyrurj-208	95	19	in	in	ADP
arestyrurj-208	95	20	t1	t1	NOUN
arestyrurj-208	95	21	but	but	CCONJ
arestyrurj-208	95	22	not	not	PART
arestyrurj-208	95	23	in	in	ADP
arestyrurj-208	95	24	t2	t2	NOUN
arestyrurj-208	95	25	.	.	PUNCT
arestyrurj-208	96	1	595	595	NUM
arestyrurj-208	96	2	degs	deg	NOUN
arestyrurj-208	96	3	are	be	AUX
arestyrurj-208	96	4	upregulated	upregulate	VERB
arestyrurj-208	96	5	in	in	ADP
arestyrurj-208	96	6	t1	t1	NOUN
arestyrurj-208	96	7	against	against	ADP
arestyrurj-208	96	8	both	both	DET
arestyrurj-208	96	9	t2	t2	NOUN
arestyrurj-208	96	10	and	and	CCONJ
arestyrurj-208	96	11	d	d	NOUN
arestyrurj-208	96	12	but	but	CCONJ
arestyrurj-208	96	13	show	show	VERB
arestyrurj-208	96	14	no	no	DET
arestyrurj-208	96	15	differential	differential	ADJ
arestyrurj-208	96	16	expression	expression	NOUN
arestyrurj-208	96	17	in	in	ADP
arestyrurj-208	96	18	t2	t2	PROPN
arestyrurj-208	96	19	.	.	PUNCT
arestyrurj-208	97	1	however	however	ADV
arestyrurj-208	97	2	,	,	PUNCT
arestyrurj-208	97	3	858	858	NUM
arestyrurj-208	97	4	genes	gene	NOUN
arestyrurj-208	97	5	are	be	AUX
arestyrurj-208	97	6	upregulated	upregulate	VERB
arestyrurj-208	97	7	in	in	ADP
arestyrurj-208	97	8	both	both	PRON
arestyrurj-208	97	9	t1	t1	NOUN
arestyrurj-208	97	10	and	and	CCONJ
arestyrurj-208	97	11	t2	t2	NOUN
arestyrurj-208	97	12	against	against	ADP
arestyrurj-208	97	13	d	d	PROPN
arestyrurj-208	97	14	and	and	CCONJ
arestyrurj-208	97	15	show	show	VERB
arestyrurj-208	97	16	no	no	DET
arestyrurj-208	97	17	differential	differential	ADJ
arestyrurj-208	97	18	expression	expression	NOUN
arestyrurj-208	97	19	in	in	ADP
arestyrurj-208	97	20	the	the	DET
arestyrurj-208	97	21	pairwise	pairwise	NOUN
arestyrurj-208	97	22	comparison	comparison	NOUN
arestyrurj-208	97	23	between	between	ADP
arestyrurj-208	97	24	t1	t1	NOUN
arestyrurj-208	97	25	and	and	CCONJ
arestyrurj-208	97	26	t2	t2	NOUN
arestyrurj-208	97	27	.	.	PUNCT
arestyrurj-208	98	1	again	again	ADV
arestyrurj-208	98	2	,	,	PUNCT
arestyrurj-208	98	3	since	since	SCONJ
arestyrurj-208	98	4	there	there	PRON
arestyrurj-208	98	5	are	be	VERB
arestyrurj-208	98	6	many	many	ADJ
arestyrurj-208	98	7	upregulated	upregulated	ADJ
arestyrurj-208	98	8	genes	gene	NOUN
arestyrurj-208	98	9	showing	show	VERB
arestyrurj-208	98	10	differences	difference	NOUN
arestyrurj-208	98	11	and	and	CCONJ
arestyrurj-208	98	12	similarities	similarity	NOUN
arestyrurj-208	98	13	in	in	ADP
arestyrurj-208	98	14	expression	expression	NOUN
arestyrurj-208	98	15	patterns	pattern	NOUN
arestyrurj-208	98	16	in	in	ADP
arestyrurj-208	98	17	both	both	CCONJ
arestyrurj-208	98	18	t1	t1	NOUN
arestyrurj-208	98	19	and	and	CCONJ
arestyrurj-208	98	20	t2	t2	NOUN
arestyrurj-208	98	21	,	,	PUNCT
arestyrurj-208	98	22	it	it	PRON
arestyrurj-208	98	23	is	be	AUX
arestyrurj-208	98	24	possible	possible	ADJ
arestyrurj-208	98	25	that	that	SCONJ
arestyrurj-208	98	26	after	after	SCONJ
arestyrurj-208	98	27	independent	independent	ADJ
arestyrurj-208	98	28	triploidization	triploidization	NOUN
arestyrurj-208	98	29	events	event	NOUN
arestyrurj-208	98	30	,	,	PUNCT
arestyrurj-208	98	31	t1	t1	NOUN
arestyrurj-208	98	32	and	and	CCONJ
arestyrurj-208	98	33	t2	t2	PROPN
arestyrurj-208	98	34	adapted	adapt	VERB
arestyrurj-208	98	35	in	in	ADP
arestyrurj-208	98	36	somewhat	somewhat	ADV
arestyrurj-208	98	37	similar	similar	ADJ
arestyrurj-208	98	38	ways	way	NOUN
arestyrurj-208	98	39	to	to	ADP
arestyrurj-208	98	40	the	the	DET
arestyrurj-208	98	41	same	same	ADJ
arestyrurj-208	98	42	environmental	environmental	ADJ
arestyrurj-208	98	43	conditions	condition	NOUN
arestyrurj-208	98	44	.	.	PUNCT
arestyrurj-208	99	1	while	while	SCONJ
arestyrurj-208	99	2	both	both	DET
arestyrurj-208	99	3	triploid	triploid	ADJ
arestyrurj-208	99	4	clusters	cluster	NOUN
arestyrurj-208	99	5	have	have	VERB
arestyrurj-208	99	6	many	many	ADJ
arestyrurj-208	99	7	degs	deg	NOUN
arestyrurj-208	99	8	regulated	regulate	VERB
arestyrurj-208	99	9	in	in	ADP
arestyrurj-208	99	10	the	the	DET
arestyrurj-208	99	11	same	same	ADJ
arestyrurj-208	99	12	way	way	NOUN
arestyrurj-208	99	13	,	,	PUNCT
arestyrurj-208	99	14	there	there	PRON
arestyrurj-208	99	15	is	be	VERB
arestyrurj-208	99	16	an	an	DET
arestyrurj-208	99	17	equally	equally	ADV
arestyrurj-208	99	18	large	large	ADJ
arestyrurj-208	99	19	number	number	NOUN
arestyrurj-208	99	20	of	of	ADP
arestyrurj-208	99	21	degs	deg	NOUN
arestyrurj-208	99	22	expressed	express	VERB
arestyrurj-208	99	23	in	in	ADP
arestyrurj-208	99	24	completely	completely	ADV
arestyrurj-208	99	25	different	different	ADJ
arestyrurj-208	99	26	ways	way	NOUN
arestyrurj-208	99	27	even	even	ADV
arestyrurj-208	99	28	between	between	ADP
arestyrurj-208	99	29	the	the	DET
arestyrurj-208	99	30	two	two	NUM
arestyrurj-208	99	31	clusters	cluster	NOUN
arestyrurj-208	99	32	.	.	PUNCT
arestyrurj-208	100	1	this	this	PRON
arestyrurj-208	100	2	may	may	AUX
arestyrurj-208	100	3	indicate	indicate	VERB
arestyrurj-208	100	4	that	that	SCONJ
arestyrurj-208	100	5	there	there	PRON
arestyrurj-208	100	6	were	be	VERB
arestyrurj-208	100	7	two	two	NUM
arestyrurj-208	100	8	separate	separate	ADJ
arestyrurj-208	100	9	sources	source	NOUN
arestyrurj-208	100	10	of	of	ADP
arestyrurj-208	100	11	triploidization	triploidization	NOUN
arestyrurj-208	100	12	in	in	ADP
arestyrurj-208	100	13	the	the	DET
arestyrurj-208	100	14	p.	p.	NOUN
arestyrurj-208	100	15	acuta	acuta	NOUN
arestyrurj-208	100	16	reef	reef	PROPN
arestyrurj-208	100	17	in	in	ADP
arestyrurj-208	100	18	kāneʻohe	kāneʻohe	PROPN
arestyrurj-208	100	19	bay	bay	NOUN
arestyrurj-208	100	20	,	,	PUNCT
arestyrurj-208	100	21	but	but	CCONJ
arestyrurj-208	100	22	adaptation	adaptation	NOUN
arestyrurj-208	100	23	of	of	ADP
arestyrurj-208	100	24	similar	similar	ADJ
arestyrurj-208	100	25	forms	form	NOUN
arestyrurj-208	100	26	of	of	ADP
arestyrurj-208	100	27	triploidization	triploidization	NOUN
arestyrurj-208	100	28	in	in	ADP
arestyrurj-208	100	29	the	the	DET
arestyrurj-208	100	30	coral	coral	NOUN
arestyrurj-208	100	31	can	can	AUX
arestyrurj-208	100	32	cause	cause	VERB
arestyrurj-208	100	33	some	some	DET
arestyrurj-208	100	34	genes	gene	NOUN
arestyrurj-208	100	35	in	in	ADP
arestyrurj-208	100	36	both	both	DET
arestyrurj-208	100	37	clusters	cluster	NOUN
arestyrurj-208	100	38	to	to	PART
arestyrurj-208	100	39	be	be	AUX
arestyrurj-208	100	40	differentially	differentially	ADV
arestyrurj-208	100	41	expressed	express	VERB
arestyrurj-208	100	42	in	in	ADP
arestyrurj-208	100	43	similar	similar	ADJ
arestyrurj-208	100	44	ways	way	NOUN
arestyrurj-208	100	45	.	.	PUNCT
arestyrurj-208	101	1	in	in	ADP
arestyrurj-208	101	2	future	future	ADJ
arestyrurj-208	101	3	studies	study	NOUN
arestyrurj-208	101	4	,	,	PUNCT
arestyrurj-208	101	5	we	we	PRON
arestyrurj-208	101	6	will	will	AUX
arestyrurj-208	101	7	compile	compile	VERB
arestyrurj-208	101	8	gene	gene	NOUN
arestyrurj-208	101	9	ontology	ontology	NOUN
arestyrurj-208	101	10	data	datum	NOUN
arestyrurj-208	101	11	obtained	obtain	VERB
arestyrurj-208	101	12	from	from	ADP
arestyrurj-208	101	13	diamond	diamond	NOUN
arestyrurj-208	101	14	,	,	PUNCT
arestyrurj-208	101	15	interproscan	interproscan	NOUN
arestyrurj-208	101	16	,	,	PUNCT
arestyrurj-208	101	17	and	and	CCONJ
arestyrurj-208	101	18	blast2go	blast2go	NOUN
arestyrurj-208	101	19	and	and	CCONJ
arestyrurj-208	101	20	perform	perform	VERB
arestyrurj-208	101	21	functional	functional	ADJ
arestyrurj-208	101	22	enrichment	enrichment	NOUN
arestyrurj-208	101	23	analysis	analysis	NOUN
arestyrurj-208	101	24	will	will	AUX
arestyrurj-208	101	25	be	be	AUX
arestyrurj-208	101	26	performed	perform	VERB
arestyrurj-208	101	27	on	on	ADP
arestyrurj-208	101	28	all	all	DET
arestyrurj-208	101	29	119	119	NUM
arestyrurj-208	101	30	samples	sample	NOUN
arestyrurj-208	101	31	collected	collect	VERB
arestyrurj-208	101	32	in	in	ADP
arestyrurj-208	101	33	the	the	DET
arestyrurj-208	101	34	study	study	NOUN
arestyrurj-208	101	35	.	.	PUNCT
arestyrurj-208	102	1	this	this	PRON
arestyrurj-208	102	2	will	will	AUX
arestyrurj-208	102	3	be	be	AUX
arestyrurj-208	102	4	done	do	VERB
arestyrurj-208	102	5	in	in	ADP
arestyrurj-208	102	6	order	order	NOUN
arestyrurj-208	102	7	to	to	PART
arestyrurj-208	102	8	identify	identify	VERB
arestyrurj-208	102	9	the	the	DET
arestyrurj-208	102	10	biological	biological	ADJ
arestyrurj-208	102	11	processes	process	NOUN
arestyrurj-208	102	12	and	and	CCONJ
arestyrurj-208	102	13	molecular	molecular	ADJ
arestyrurj-208	102	14	functions	function	NOUN
arestyrurj-208	102	15	that	that	PRON
arestyrurj-208	102	16	are	be	AUX
arestyrurj-208	102	17	differentially	differentially	ADV
arestyrurj-208	102	18	regulated	regulate	VERB
arestyrurj-208	102	19	in	in	ADP
arestyrurj-208	102	20	triploid	triploid	ADJ
arestyrurj-208	102	21	p.	p.	NOUN
arestyrurj-208	102	22	acuta	acuta	NOUN
arestyrurj-208	102	23	across	across	ADP
arestyrurj-208	102	24	all	all	DET
arestyrurj-208	102	25	stress	stress	NOUN
arestyrurj-208	102	26	conditions	condition	NOUN
arestyrurj-208	102	27	as	as	SCONJ
arestyrurj-208	102	28	described	describe	VERB
arestyrurj-208	102	29	in	in	ADP
arestyrurj-208	102	30	the	the	DET
arestyrurj-208	102	31	methodology	methodology	NOUN
arestyrurj-208	102	32	section	section	NOUN
arestyrurj-208	102	33	(	(	PUNCT
arestyrurj-208	102	34	atac	atac	PROPN
arestyrurj-208	102	35	,	,	PUNCT
arestyrurj-208	102	36	athc	athc	NUM
arestyrurj-208	102	37	,	,	PUNCT
arestyrurj-208	102	38	htac	htac	PROPN
arestyrurj-208	102	39	,	,	PUNCT
arestyrurj-208	102	40	and	and	CCONJ
arestyrurj-208	102	41	hthc	hthc	PROPN
arestyrurj-208	102	42	)	)	PUNCT
arestyrurj-208	102	43	.	.	PUNCT
arestyrurj-208	103	1	this	this	DET
arestyrurj-208	103	2	analysis	analysis	NOUN
arestyrurj-208	103	3	will	will	AUX
arestyrurj-208	103	4	shed	shed	VERB
arestyrurj-208	103	5	more	more	ADJ
arestyrurj-208	103	6	light	light	NOUN
arestyrurj-208	103	7	on	on	ADP
arestyrurj-208	103	8	the	the	DET
arestyrurj-208	103	9	physiological	physiological	ADJ
arestyrurj-208	103	10	and	and	CCONJ
arestyrurj-208	103	11	biochemical	biochemical	ADJ
arestyrurj-208	103	12	differences	difference	NOUN
arestyrurj-208	103	13	between	between	ADP
arestyrurj-208	103	14	triploid	triploid	NOUN
arestyrurj-208	103	15	and	and	CCONJ
arestyrurj-208	103	16	diploid	diploid	ADJ
arestyrurj-208	103	17	p.	p.	NOUN
arestyrurj-208	103	18	acuta	acuta	NOUN
arestyrurj-208	103	19	.	.	PUNCT
arestyrurj-208	104	1	comparative	comparative	ADJ
arestyrurj-208	104	2	functional	functional	ADJ
arestyrurj-208	104	3	enrichment	enrichment	NOUN
arestyrurj-208	104	4	analysis	analysis	NOUN
arestyrurj-208	104	5	will	will	AUX
arestyrurj-208	104	6	provide	provide	VERB
arestyrurj-208	104	7	insight	insight	NOUN
arestyrurj-208	104	8	into	into	ADP
arestyrurj-208	104	9	pathways	pathway	NOUN
arestyrurj-208	104	10	impacted	impact	VERB
arestyrurj-208	104	11	by	by	ADP
arestyrurj-208	104	12	differential	differential	ADJ
arestyrurj-208	104	13	expression	expression	NOUN
arestyrurj-208	104	14	of	of	ADP
arestyrurj-208	104	15	some	some	DET
arestyrurj-208	104	16	genes	gene	NOUN
arestyrurj-208	104	17	in	in	ADP
arestyrurj-208	104	18	triploid	triploid	ADJ
arestyrurj-208	104	19	lineages	lineage	NOUN
arestyrurj-208	104	20	in	in	ADP
arestyrurj-208	104	21	p.	p.	NOUN
arestyrurj-208	104	22	acuta	acuta	NOUN
arestyrurj-208	104	23	under	under	ADP
arestyrurj-208	104	24	environmental	environmental	ADJ
arestyrurj-208	104	25	stress	stress	NOUN
arestyrurj-208	104	26	.	.	PUNCT
arestyrurj-208	105	1	it	it	PRON
arestyrurj-208	105	2	will	will	AUX
arestyrurj-208	105	3	also	also	ADV
arestyrurj-208	105	4	shed	shed	VERB
arestyrurj-208	105	5	light	light	NOUN
arestyrurj-208	105	6	on	on	ADP
arestyrurj-208	105	7	how	how	SCONJ
arestyrurj-208	105	8	triploidization	triploidization	NOUN
arestyrurj-208	105	9	can	can	AUX
arestyrurj-208	105	10	help	help	VERB
arestyrurj-208	105	11	the	the	DET
arestyrurj-208	105	12	stress	stress	NOUN
arestyrurj-208	105	13	-	-	PUNCT
arestyrurj-208	105	14	sensitive	sensitive	ADJ
arestyrurj-208	105	15	p.	p.	NOUN
arestyrurj-208	105	16	acuta	acuta	NOUN
arestyrurj-208	105	17	adapt	adapt	VERB
arestyrurj-208	105	18	to	to	ADP
arestyrurj-208	105	19	changing	change	VERB
arestyrurj-208	105	20	environmental	environmental	ADJ
arestyrurj-208	105	21	conditions	condition	NOUN
arestyrurj-208	105	22	to	to	PART
arestyrurj-208	105	23	ensure	ensure	VERB
arestyrurj-208	105	24	survival	survival	NOUN
arestyrurj-208	105	25	in	in	ADP
arestyrurj-208	105	26	the	the	DET
arestyrurj-208	105	27	face	face	NOUN
arestyrurj-208	105	28	of	of	ADP
arestyrurj-208	105	29	rampant	rampant	ADJ
arestyrurj-208	105	30	climate	climate	NOUN
arestyrurj-208	105	31	change	change	NOUN
arestyrurj-208	105	32	in	in	ADP
arestyrurj-208	105	33	the	the	DET
arestyrurj-208	105	34	decades	decade	NOUN
arestyrurj-208	105	35	to	to	PART
arestyrurj-208	105	36	come	come	VERB
arestyrurj-208	105	37	.	.	PUNCT
arestyrurj-208	106	1	5	5	NUM
arestyrurj-208	106	2	acknowledgements	acknowledgement	NOUN
arestyrurj-208	106	3	i	i	PRON
arestyrurj-208	106	4	would	would	AUX
arestyrurj-208	106	5	like	like	VERB
arestyrurj-208	106	6	to	to	PART
arestyrurj-208	106	7	thank	thank	VERB
arestyrurj-208	106	8	my	my	PRON
arestyrurj-208	106	9	mentor	mentor	NOUN
arestyrurj-208	106	10	,	,	PUNCT
arestyrurj-208	106	11	erin	erin	PROPN
arestyrurj-208	106	12	chille	chille	PROPN
arestyrurj-208	106	13	,	,	PUNCT
arestyrurj-208	106	14	for	for	ADP
arestyrurj-208	106	15	her	her	PRON
arestyrurj-208	106	16	guidance	guidance	NOUN
arestyrurj-208	106	17	and	and	CCONJ
arestyrurj-208	106	18	support	support	NOUN
arestyrurj-208	106	19	.	.	PUNCT
arestyrurj-208	107	1	i	i	PRON
arestyrurj-208	107	2	would	would	AUX
arestyrurj-208	107	3	also	also	ADV
arestyrurj-208	107	4	like	like	VERB
arestyrurj-208	107	5	to	to	PART
arestyrurj-208	107	6	thank	thank	VERB
arestyrurj-208	107	7	dr	dr	PROPN
arestyrurj-208	107	8	.	.	PROPN
arestyrurj-208	107	9	timothy	timothy	PROPN
arestyrurj-208	107	10	stephens	stephens	PROPN
arestyrurj-208	107	11	for	for	ADP
arestyrurj-208	107	12	detecting	detect	VERB
arestyrurj-208	107	13	triploidy	triploidy	NOUN
arestyrurj-208	107	14	in	in	ADP
arestyrurj-208	107	15	the	the	DET
arestyrurj-208	107	16	samples	sample	NOUN
arestyrurj-208	107	17	and	and	CCONJ
arestyrurj-208	107	18	letting	let	VERB
arestyrurj-208	107	19	us	we	PRON
arestyrurj-208	107	20	use	use	VERB
arestyrurj-208	107	21	his	his	PRON
arestyrurj-208	107	22	findings	finding	NOUN
arestyrurj-208	107	23	and	and	CCONJ
arestyrurj-208	107	24	data	datum	NOUN
arestyrurj-208	107	25	as	as	ADP
arestyrurj-208	107	26	the	the	DET
arestyrurj-208	107	27	basis	basis	NOUN
arestyrurj-208	107	28	for	for	ADP
arestyrurj-208	107	29	our	our	PRON
arestyrurj-208	107	30	study	study	NOUN
arestyrurj-208	107	31	.	.	PUNCT
arestyrurj-208	108	1	lastly	lastly	ADV
arestyrurj-208	108	2	,	,	PUNCT
arestyrurj-208	108	3	i	i	PRON
arestyrurj-208	108	4	would	would	AUX
arestyrurj-208	108	5	like	like	VERB
arestyrurj-208	108	6	to	to	PART
arestyrurj-208	108	7	thank	thank	VERB
arestyrurj-208	108	8	dr	dr	PROPN
arestyrurj-208	108	9	.	.	PROPN
arestyrurj-208	108	10	debashish	debashish	PROPN
arestyrurj-208	108	11	bhattacharya	bhattacharya	PROPN
arestyrurj-208	108	12	for	for	ADP
arestyrurj-208	108	13	his	his	PRON
arestyrurj-208	108	14	continued	continue	VERB
arestyrurj-208	108	15	scientific	scientific	ADJ
arestyrurj-208	108	16	guidance	guidance	NOUN
arestyrurj-208	108	17	.	.	PUNCT
arestyrurj-208	109	1	6	6	NUM
arestyrurj-208	109	2	references	reference	NOUN
arestyrurj-208	109	3	[	[	X
arestyrurj-208	109	4	1	1	NUM
arestyrurj-208	109	5	]	]	PUNCT
arestyrurj-208	109	6	andrews	andrews	PROPN
arestyrurj-208	109	7	,	,	PUNCT
arestyrurj-208	109	8	s.	s.	PROPN
arestyrurj-208	109	9	(	(	PUNCT
arestyrurj-208	109	10	2010	2010	NUM
arestyrurj-208	109	11	)	)	PUNCT
arestyrurj-208	109	12	.	.	PUNCT
arestyrurj-208	110	1	fastqc	fastqc	VERB
arestyrurj-208	110	2	:	:	PUNCT
arestyrurj-208	110	3	a	a	DET
arestyrurj-208	110	4	quality	quality	NOUN
arestyrurj-208	110	5	control	control	NOUN
arestyrurj-208	110	6	tool	tool	NOUN
arestyrurj-208	110	7	for	for	ADP
arestyrurj-208	110	8	high	high	ADJ
arestyrurj-208	110	9	throughput	throughput	NOUN
arestyrurj-208	110	10	sequence	sequence	NOUN
arestyrurj-208	110	11	data	datum	NOUN
arestyrurj-208	110	12	.	.	PUNCT
arestyrurj-208	111	1	aresty	aresty	PROPN
arestyrurj-208	111	2	rutgers	rutgers	PROPN
arestyrurj-208	111	3	undergraduate	undergraduate	PROPN
arestyrurj-208	111	4	research	research	PROPN
arestyrurj-208	111	5	journal	journal	PROPN
arestyrurj-208	111	6	,	,	PUNCT
arestyrurj-208	111	7	volume	volume	NOUN
arestyrurj-208	111	8	i	i	PRON
arestyrurj-208	111	9	,	,	PUNCT
arestyrurj-208	111	10	issue	issue	NOUN
arestyrurj-208	111	11	iv	iv	NUM
arestyrurj-208	111	12	[	[	X
arestyrurj-208	111	13	2	2	NUM
arestyrurj-208	111	14	]	]	PUNCT
arestyrurj-208	111	15	bhattacharya	bhattacharya	PROPN
arestyrurj-208	111	16	,	,	PUNCT
arestyrurj-208	111	17	d.	d.	PROPN
arestyrurj-208	111	18	,	,	PUNCT
arestyrurj-208	111	19	stephens	stephen	NOUN
arestyrurj-208	111	20	,	,	PUNCT
arestyrurj-208	111	21	t.	t.	PROPN
arestyrurj-208	111	22	g.	g.	PROPN
arestyrurj-208	111	23	,	,	PUNCT
arestyrurj-208	111	24	tinoco	tinoco	PROPN
arestyrurj-208	111	25	,	,	PUNCT
arestyrurj-208	111	26	a.	a.	NOUN
arestyrurj-208	111	27	i.	i.	PROPN
arestyrurj-208	111	28	,	,	PUNCT
arestyrurj-208	111	29	richmond	richmond	PROPN
arestyrurj-208	111	30	,	,	PUNCT
arestyrurj-208	111	31	r.	r.	PROPN
arestyrurj-208	111	32	h.	h.	PROPN
arestyrurj-208	111	33	,	,	PUNCT
arestyrurj-208	111	34	&	&	CCONJ
arestyrurj-208	111	35	cleves	cleves	PROPN
arestyrurj-208	111	36	,	,	PUNCT
arestyrurj-208	111	37	p.a	p.a	PROPN
arestyrurj-208	111	38	.	.	PROPN
arestyrurj-208	111	39	(	(	PUNCT
arestyrurj-208	111	40	2022	2022	NUM
arestyrurj-208	111	41	)	)	PUNCT
arestyrurj-208	111	42	.	.	PUNCT
arestyrurj-208	112	1	life	life	NOUN
arestyrurj-208	112	2	on	on	ADP
arestyrurj-208	112	3	the	the	DET
arestyrurj-208	112	4	edge	edge	NOUN
arestyrurj-208	112	5	:	:	PUNCT
arestyrurj-208	112	6	hawaiian	hawaiian	ADJ
arestyrurj-208	112	7	model	model	NOUN
arestyrurj-208	112	8	for	for	ADP
arestyrurj-208	112	9	coral	coral	ADJ
arestyrurj-208	112	10	evolution	evolution	NOUN
arestyrurj-208	112	11	.	.	PUNCT
arestyrurj-208	113	1	limnology	limnology	NOUN
arestyrurj-208	113	2	and	and	CCONJ
arestyrurj-208	113	3	oceanography	oceanography	NOUN
arestyrurj-208	113	4	.	.	PUNCT
arestyrurj-208	114	1	[	[	X
arestyrurj-208	114	2	3	3	X
arestyrurj-208	114	3	]	]	PUNCT
arestyrurj-208	114	4	buchfink	buchfink	NOUN
arestyrurj-208	114	5	,	,	PUNCT
arestyrurj-208	114	6	b.	b.	PROPN
arestyrurj-208	114	7	,	,	PUNCT
arestyrurj-208	114	8	xie	xie	PROPN
arestyrurj-208	114	9	,	,	PUNCT
arestyrurj-208	114	10	c.	c.	PROPN
arestyrurj-208	114	11	,	,	PUNCT
arestyrurj-208	114	12	&	&	CCONJ
arestyrurj-208	114	13	huson	huson	PROPN
arestyrurj-208	114	14	,	,	PUNCT
arestyrurj-208	114	15	d.	d.	PROPN
arestyrurj-208	114	16	h.	h.	PROPN
arestyrurj-208	114	17	(	(	PUNCT
arestyrurj-208	114	18	2015	2015	NUM
arestyrurj-208	114	19	)	)	PUNCT
arestyrurj-208	114	20	.	.	PUNCT
arestyrurj-208	115	1	fast	fast	ADJ
arestyrurj-208	115	2	and	and	CCONJ
arestyrurj-208	115	3	sensitive	sensitive	ADJ
arestyrurj-208	115	4	protein	protein	NOUN
arestyrurj-208	115	5	alignment	alignment	NOUN
arestyrurj-208	115	6	using	use	VERB
arestyrurj-208	115	7	diamond	diamond	NOUN
arestyrurj-208	115	8	.	.	PUNCT
arestyrurj-208	116	1	nature	nature	NOUN
arestyrurj-208	116	2	methods	method	NOUN
arestyrurj-208	116	3	,	,	PUNCT
arestyrurj-208	116	4	12(1	12(1	NUM
arestyrurj-208	116	5	)	)	PUNCT
arestyrurj-208	116	6	,	,	PUNCT
arestyrurj-208	116	7	59	59	NUM
arestyrurj-208	116	8	-	-	SYM
arestyrurj-208	116	9	60	60	NUM
arestyrurj-208	116	10	.	.	PUNCT
arestyrurj-208	117	1	[	[	X
arestyrurj-208	117	2	4	4	NUM
arestyrurj-208	117	3	]	]	X
arestyrurj-208	117	4	chille	chille	PROPN
arestyrurj-208	117	5	,	,	PUNCT
arestyrurj-208	117	6	e.	e.	PROPN
arestyrurj-208	117	7	e.	e.	PROPN
arestyrurj-208	117	8	,	,	PUNCT
arestyrurj-208	117	9	strand	strand	PROPN
arestyrurj-208	117	10	,	,	PUNCT
arestyrurj-208	117	11	e.	e.	PROPN
arestyrurj-208	117	12	,	,	PUNCT
arestyrurj-208	117	13	neder	neder	NOUN
arestyrurj-208	117	14	,	,	PUNCT
arestyrurj-208	117	15	m.	m.	NOUN
arestyrurj-208	117	16	,	,	PUNCT
arestyrurj-208	117	17	schmidt	schmidt	NOUN
arestyrurj-208	117	18	,	,	PUNCT
arestyrurj-208	117	19	v.	v.	PROPN
arestyrurj-208	117	20	,	,	PUNCT
arestyrurj-208	117	21	sherman	sherman	PROPN
arestyrurj-208	117	22	,	,	PUNCT
arestyrurj-208	117	23	m.	m.	NOUN
arestyrurj-208	117	24	,	,	PUNCT
arestyrurj-208	117	25	putnam	putnam	PROPN
arestyrurj-208	117	26	,	,	PUNCT
arestyrurj-208	117	27	h.	h.	PROPN
arestyrurj-208	117	28	m.	m.	PROPN
arestyrurj-208	117	29	,	,	PUNCT
arestyrurj-208	117	30	&	&	CCONJ
arestyrurj-208	117	31	mass	mass	PROPN
arestyrurj-208	117	32	,	,	PUNCT
arestyrurj-208	117	33	t.	t.	NOUN
arestyrurj-208	117	34	(	(	PUNCT
arestyrurj-208	117	35	2021	2021	NUM
arestyrurj-208	117	36	)	)	PUNCT
arestyrurj-208	117	37	.	.	PUNCT
arestyrurj-208	118	1	developmental	developmental	ADJ
arestyrurj-208	118	2	series	series	NOUN
arestyrurj-208	118	3	of	of	ADP
arestyrurj-208	118	4	gene	gene	NOUN
arestyrurj-208	118	5	expression	expression	NOUN
arestyrurj-208	118	6	clarifies	clarify	VERB
arestyrurj-208	118	7	maternal	maternal	ADJ
arestyrurj-208	118	8	mrna	mrna	NOUN
arestyrurj-208	118	9	provisioning	provisioning	PROPN
arestyrurj-208	118	10	and	and	CCONJ
arestyrurj-208	118	11	maternal	maternal	ADJ
arestyrurj-208	118	12	-	-	PUNCT
arestyrurj-208	118	13	to	to	ADP
arestyrurj-208	118	14	-	-	PUNCT
arestyrurj-208	118	15	zygotic	zygotic	ADJ
arestyrurj-208	118	16	transition	transition	NOUN
arestyrurj-208	118	17	in	in	ADP
arestyrurj-208	118	18	the	the	DET
arestyrurj-208	118	19	reef	reef	NOUN
arestyrurj-208	118	20	-	-	PUNCT
arestyrurj-208	118	21	building	building	NOUN
arestyrurj-208	118	22	coral	coral	ADJ
arestyrurj-208	118	23	montipora	montipora	PROPN
arestyrurj-208	118	24	capitata	capitata	PROPN
arestyrurj-208	118	25	.	.	PUNCT
arestyrurj-208	119	1	biorxiv	biorxiv	NOUN
arestyrurj-208	119	2	.	.	PUNCT
arestyrurj-208	120	1	[	[	X
arestyrurj-208	120	2	5	5	NUM
arestyrurj-208	120	3	]	]	X
arestyrurj-208	120	4	conway	conway	PROPN
arestyrurj-208	120	5	,	,	PUNCT
arestyrurj-208	120	6	j.	j.	PROPN
arestyrurj-208	120	7	r.	r.	PROPN
arestyrurj-208	120	8	,	,	PUNCT
arestyrurj-208	120	9	lex	lex	PROPN
arestyrurj-208	120	10	,	,	PUNCT
arestyrurj-208	120	11	a.	a.	PROPN
arestyrurj-208	120	12	,	,	PUNCT
arestyrurj-208	120	13	&	&	CCONJ
arestyrurj-208	120	14	gehlenborg	gehlenborg	ADJ
arestyrurj-208	120	15	,	,	PUNCT
arestyrurj-208	120	16	n.	n.	NOUN
arestyrurj-208	120	17	(	(	PUNCT
arestyrurj-208	120	18	2017	2017	NUM
arestyrurj-208	120	19	)	)	PUNCT
arestyrurj-208	120	20	.	.	PUNCT
arestyrurj-208	121	1	upsetr	upsetr	PROPN
arestyrurj-208	121	2	:	:	PUNCT
arestyrurj-208	121	3	an	an	DET
arestyrurj-208	121	4	r	r	NOUN
arestyrurj-208	121	5	package	package	NOUN
arestyrurj-208	121	6	for	for	ADP
arestyrurj-208	121	7	the	the	DET
arestyrurj-208	121	8	visualization	visualization	NOUN
arestyrurj-208	121	9	of	of	ADP
arestyrurj-208	121	10	intersecting	intersecting	ADJ
arestyrurj-208	121	11	sets	set	NOUN
arestyrurj-208	121	12	and	and	CCONJ
arestyrurj-208	121	13	their	their	PRON
arestyrurj-208	121	14	properties	property	NOUN
arestyrurj-208	121	15	.	.	PUNCT
arestyrurj-208	122	1	bioinformatics	bioinformatic	NOUN
arestyrurj-208	122	2	.	.	PUNCT
arestyrurj-208	123	1	[	[	X
arestyrurj-208	123	2	6	6	NUM
arestyrurj-208	123	3	]	]	X
arestyrurj-208	123	4	highsmith	highsmith	PROPN
arestyrurj-208	123	5	,	,	PUNCT
arestyrurj-208	123	6	r.	r.	PROPN
arestyrurj-208	123	7	c.	c.	PROPN
arestyrurj-208	123	8	(	(	PUNCT
arestyrurj-208	123	9	1982	1982	NUM
arestyrurj-208	123	10	)	)	PUNCT
arestyrurj-208	123	11	.	.	PUNCT
arestyrurj-208	124	1	reproduction	reproduction	NOUN
arestyrurj-208	124	2	by	by	ADP
arestyrurj-208	124	3	fragmentation	fragmentation	NOUN
arestyrurj-208	124	4	in	in	ADP
arestyrurj-208	124	5	corals	coral	NOUN
arestyrurj-208	124	6	.	.	PUNCT
arestyrurj-208	125	1	marine	marine	ADJ
arestyrurj-208	125	2	ecology	ecology	NOUN
arestyrurj-208	125	3	progress	progress	PROPN
arestyrurj-208	125	4	series	series	PROPN
arestyrurj-208	125	5	.	.	PUNCT
arestyrurj-208	126	1	oldendorf	oldendorf	PROPN
arestyrurj-208	126	2	,	,	PUNCT
arestyrurj-208	126	3	7(2	7(2	NUM
arestyrurj-208	126	4	)	)	PUNCT
arestyrurj-208	126	5	,	,	PUNCT
arestyrurj-208	126	6	207	207	NUM
arestyrurj-208	126	7	-	-	SYM
arestyrurj-208	126	8	226	226	NUM
arestyrurj-208	126	9	.	.	PUNCT
arestyrurj-208	127	1	[	[	X
arestyrurj-208	127	2	7	7	NUM
arestyrurj-208	127	3	]	]	SYM
arestyrurj-208	127	4	jones	jones	PROPN
arestyrurj-208	127	5	,	,	PUNCT
arestyrurj-208	127	6	p.	p.	PROPN
arestyrurj-208	127	7	,	,	PUNCT
arestyrurj-208	127	8	binns	binn	NOUN
arestyrurj-208	127	9	,	,	PUNCT
arestyrurj-208	127	10	d.	d.	PROPN
arestyrurj-208	127	11	,	,	PUNCT
arestyrurj-208	127	12	chang	chang	PROPN
arestyrurj-208	127	13	,	,	PUNCT
arestyrurj-208	127	14	h.	h.	PROPN
arestyrurj-208	127	15	y.	y.	PROPN
arestyrurj-208	127	16	,	,	PUNCT
arestyrurj-208	127	17	fraser	fraser	PROPN
arestyrurj-208	127	18	,	,	PUNCT
arestyrurj-208	127	19	m.	m.	NOUN
arestyrurj-208	127	20	,	,	PUNCT
arestyrurj-208	127	21	li	li	PROPN
arestyrurj-208	127	22	,	,	PUNCT
arestyrurj-208	127	23	w.	w.	PROPN
arestyrurj-208	127	24	,	,	PUNCT
arestyrurj-208	127	25	mcanulla	mcanulla	NOUN
arestyrurj-208	127	26	,	,	PUNCT
arestyrurj-208	127	27	c.	c.	PROPN
arestyrurj-208	127	28	,	,	PUNCT
arestyrurj-208	127	29	...	...	PUNCT
arestyrurj-208	127	30	&	&	CCONJ
arestyrurj-208	127	31	hunter	hunter	PROPN
arestyrurj-208	127	32	,	,	PUNCT
arestyrurj-208	127	33	s.	s.	PROPN
arestyrurj-208	127	34	(	(	PUNCT
arestyrurj-208	127	35	2014	2014	NUM
arestyrurj-208	127	36	)	)	PUNCT
arestyrurj-208	127	37	.	.	PUNCT
arestyrurj-208	128	1	interproscan	interproscan	PROPN
arestyrurj-208	128	2	5	5	NUM
arestyrurj-208	128	3	:	:	PUNCT
arestyrurj-208	128	4	genome	genome	NOUN
arestyrurj-208	128	5	-	-	PUNCT
arestyrurj-208	128	6	scale	scale	NOUN
arestyrurj-208	128	7	protein	protein	NOUN
arestyrurj-208	128	8	function	function	NOUN
arestyrurj-208	128	9	classification	classification	NOUN
arestyrurj-208	128	10	.	.	PUNCT
arestyrurj-208	129	1	bioinformatics	bioinformatic	NOUN
arestyrurj-208	129	2	,	,	PUNCT
arestyrurj-208	129	3	30(9	30(9	NOUN
arestyrurj-208	129	4	)	)	PUNCT
arestyrurj-208	129	5	,	,	PUNCT
arestyrurj-208	129	6	1236	1236	NUM
arestyrurj-208	129	7	-	-	SYM
arestyrurj-208	129	8	1240	1240	NUM
arestyrurj-208	129	9	.	.	PUNCT
arestyrurj-208	130	1	[	[	X
arestyrurj-208	130	2	8	8	NUM
arestyrurj-208	130	3	]	]	X
arestyrurj-208	130	4	kang	kang	PROPN
arestyrurj-208	130	5	,	,	PUNCT
arestyrurj-208	130	6	h.	h.	PROPN
arestyrurj-208	130	7	j.	j.	PROPN
arestyrurj-208	130	8	,	,	PUNCT
arestyrurj-208	130	9	&	&	CCONJ
arestyrurj-208	130	10	rosenwaks	rosenwaks	PROPN
arestyrurj-208	130	11	,	,	PUNCT
arestyrurj-208	130	12	z.	z.	PROPN
arestyrurj-208	130	13	(	(	PUNCT
arestyrurj-208	130	14	2004	2004	NUM
arestyrurj-208	130	15	)	)	PUNCT
arestyrurj-208	130	16	.	.	PUNCT
arestyrurj-208	131	1	triploidy	triploidy	ADJ
arestyrurj-208	131	2	-	-	PUNCT
arestyrurj-208	131	3	the	the	DET
arestyrurj-208	131	4	breakdown	breakdown	NOUN
arestyrurj-208	131	5	of	of	ADP
arestyrurj-208	131	6	monogamy	monogamy	NOUN
arestyrurj-208	131	7	between	between	ADP
arestyrurj-208	131	8	sperm	sperm	NOUN
arestyrurj-208	131	9	and	and	CCONJ
arestyrurj-208	131	10	egg	egg	NOUN
arestyrurj-208	131	11	.	.	PUNCT
arestyrurj-208	132	1	international	international	ADJ
arestyrurj-208	132	2	journal	journal	PROPN
arestyrurj-208	132	3	of	of	ADP
arestyrurj-208	132	4	developmental	developmental	ADJ
arestyrurj-208	132	5	biology	biology	NOUN
arestyrurj-208	132	6	,	,	PUNCT
arestyrurj-208	132	7	52(5	52(5	NUM
arestyrurj-208	132	8	-	-	SYM
arestyrurj-208	132	9	6	6	NUM
arestyrurj-208	132	10	)	)	PUNCT
arestyrurj-208	132	11	,	,	PUNCT
arestyrurj-208	132	12	449	449	NUM
arestyrurj-208	132	13	-	-	SYM
arestyrurj-208	132	14	454	454	NUM
arestyrurj-208	132	15	.	.	PUNCT
arestyrurj-208	133	1	[	[	X
arestyrurj-208	133	2	9	9	NUM
arestyrurj-208	133	3	]	]	SYM
arestyrurj-208	133	4	love	love	NOUN
arestyrurj-208	133	5	,	,	PUNCT
arestyrurj-208	133	6	m.	m.	NOUN
arestyrurj-208	133	7	i.	i.	PROPN
arestyrurj-208	133	8	,	,	PUNCT
arestyrurj-208	133	9	huber	huber	PROPN
arestyrurj-208	133	10	,	,	PUNCT
arestyrurj-208	133	11	w.	w.	PROPN
arestyrurj-208	133	12	,	,	PUNCT
arestyrurj-208	133	13	&	&	CCONJ
arestyrurj-208	133	14	anders	anders	PROPN
arestyrurj-208	133	15	,	,	PUNCT
arestyrurj-208	133	16	s.	s.	PROPN
arestyrurj-208	133	17	(	(	PUNCT
arestyrurj-208	133	18	2014	2014	NUM
arestyrurj-208	133	19	)	)	PUNCT
arestyrurj-208	133	20	.	.	PUNCT
arestyrurj-208	134	1	moderated	moderated	ADJ
arestyrurj-208	134	2	estimation	estimation	NOUN
arestyrurj-208	134	3	of	of	ADP
arestyrurj-208	134	4	fold	fold	ADJ
arestyrurj-208	134	5	change	change	NOUN
arestyrurj-208	134	6	and	and	CCONJ
arestyrurj-208	134	7	dispersion	dispersion	NOUN
arestyrurj-208	134	8	for	for	ADP
arestyrurj-208	134	9	rna	rna	NOUN
arestyrurj-208	134	10	-	-	PUNCT
arestyrurj-208	134	11	seq	seq	NOUN
arestyrurj-208	134	12	data	datum	NOUN
arestyrurj-208	134	13	with	with	ADP
arestyrurj-208	134	14	deseq2	deseq2	PROPN
arestyrurj-208	134	15	.	.	PUNCT
arestyrurj-208	135	1	genome	genome	NOUN
arestyrurj-208	135	2	biology	biology	NOUN
arestyrurj-208	135	3	,	,	PUNCT
arestyrurj-208	135	4	15(12	15(12	NUM
arestyrurj-208	135	5	)	)	PUNCT
arestyrurj-208	135	6	,	,	PUNCT
arestyrurj-208	135	7	1	1	NUM
arestyrurj-208	135	8	-	-	SYM
arestyrurj-208	135	9	21	21	NUM
arestyrurj-208	135	10	.	.	PUNCT
arestyrurj-208	136	1	[	[	X
arestyrurj-208	136	2	10	10	NUM
arestyrurj-208	136	3	]	]	X
arestyrurj-208	136	4	nakajima	nakajima	PROPN
arestyrurj-208	136	5	,	,	PUNCT
arestyrurj-208	136	6	y.	y.	PROPN
arestyrurj-208	136	7	,	,	PUNCT
arestyrurj-208	136	8	chuang	chuang	PROPN
arestyrurj-208	136	9	,	,	PUNCT
arestyrurj-208	136	10	p.	p.	PROPN
arestyrurj-208	136	11	s.	s.	PROPN
arestyrurj-208	136	12	,	,	PUNCT
arestyrurj-208	136	13	ueda	ueda	PROPN
arestyrurj-208	136	14	,	,	PUNCT
arestyrurj-208	136	15	n.	n.	NOUN
arestyrurj-208	136	16	,	,	PUNCT
arestyrurj-208	136	17	&	&	CCONJ
arestyrurj-208	136	18	mitarai	mitarai	PROPN
arestyrurj-208	136	19	,	,	PUNCT
arestyrurj-208	136	20	s.	s.	PROPN
arestyrurj-208	136	21	(	(	PUNCT
arestyrurj-208	136	22	2018	2018	NUM
arestyrurj-208	136	23	)	)	PUNCT
arestyrurj-208	136	24	.	.	PUNCT
arestyrurj-208	137	1	first	first	ADJ
arestyrurj-208	137	2	evidence	evidence	NOUN
arestyrurj-208	137	3	of	of	ADP
arestyrurj-208	137	4	asexual	asexual	ADJ
arestyrurj-208	137	5	recruitment	recruitment	NOUN
arestyrurj-208	137	6	of	of	ADP
arestyrurj-208	137	7	pocillopora	pocillopora	NOUN
arestyrurj-208	137	8	acuta	acuta	NOUN
arestyrurj-208	137	9	in	in	ADP
arestyrurj-208	137	10	okinawa	okinawa	PROPN
arestyrurj-208	137	11	island	island	NOUN
arestyrurj-208	137	12	using	use	VERB
arestyrurj-208	137	13	genotypic	genotypic	ADJ
arestyrurj-208	137	14	identification	identification	NOUN
arestyrurj-208	137	15	.	.	PUNCT
arestyrurj-208	138	1	peerj	peerj	PROPN
arestyrurj-208	138	2	,	,	PUNCT
arestyrurj-208	138	3	6	6	NUM
arestyrurj-208	138	4	,	,	PUNCT
arestyrurj-208	138	5	e5915	e5915	X
arestyrurj-208	138	6	.	.	PUNCT
arestyrurj-208	139	1	[	[	X
arestyrurj-208	139	2	11	11	NUM
arestyrurj-208	139	3	]	]	X
arestyrurj-208	139	4	robinson	robinson	PROPN
arestyrurj-208	139	5	,	,	PUNCT
arestyrurj-208	139	6	m.	m.	PROPN
arestyrurj-208	139	7	d.	d.	PROPN
arestyrurj-208	139	8	,	,	PUNCT
arestyrurj-208	139	9	mccarthy	mccarthy	PROPN
arestyrurj-208	139	10	,	,	PUNCT
arestyrurj-208	139	11	d.	d.	PROPN
arestyrurj-208	139	12	j.	j.	PROPN
arestyrurj-208	139	13	,	,	PUNCT
arestyrurj-208	139	14	&	&	CCONJ
arestyrurj-208	139	15	smyth	smyth	PROPN
arestyrurj-208	139	16	,	,	PUNCT
arestyrurj-208	139	17	g.	g.	PROPN
arestyrurj-208	139	18	k.	k.	PROPN
arestyrurj-208	139	19	(	(	PUNCT
arestyrurj-208	139	20	2010	2010	NUM
arestyrurj-208	139	21	)	)	PUNCT
arestyrurj-208	139	22	.	.	PUNCT
arestyrurj-208	140	1	edger	edger	NOUN
arestyrurj-208	140	2	:	:	PUNCT
arestyrurj-208	140	3	a	a	DET
arestyrurj-208	140	4	bioconductor	bioconductor	NOUN
arestyrurj-208	140	5	package	package	NOUN
arestyrurj-208	140	6	for	for	ADP
arestyrurj-208	140	7	differential	differential	ADJ
arestyrurj-208	140	8	expression	expression	NOUN
arestyrurj-208	140	9	analysis	analysis	NOUN
arestyrurj-208	140	10	of	of	ADP
arestyrurj-208	140	11	digital	digital	ADJ
arestyrurj-208	140	12	gene	gene	NOUN
arestyrurj-208	140	13	expression	expression	NOUN
arestyrurj-208	140	14	data	datum	NOUN
arestyrurj-208	140	15	.	.	PUNCT
arestyrurj-208	141	1	bioinformatics	bioinformatic	NOUN
arestyrurj-208	141	2	,	,	PUNCT
arestyrurj-208	141	3	26(1	26(1	NUM
arestyrurj-208	141	4	)	)	PUNCT
arestyrurj-208	141	5	,	,	PUNCT
arestyrurj-208	141	6	139	139	NUM
arestyrurj-208	141	7	-	-	SYM
arestyrurj-208	141	8	140	140	NUM
arestyrurj-208	141	9	.	.	PUNCT
arestyrurj-208	142	1	[	[	X
arestyrurj-208	142	2	12	12	NUM
arestyrurj-208	142	3	]	]	PUNCT
arestyrurj-208	142	4	stephens	stephen	NOUN
arestyrurj-208	142	5	,	,	PUNCT
arestyrurj-208	142	6	t.	t.	PROPN
arestyrurj-208	142	7	g.	g.	PROPN
arestyrurj-208	142	8	,	,	PUNCT
arestyrurj-208	142	9	strand	strand	PROPN
arestyrurj-208	142	10	,	,	PUNCT
arestyrurj-208	142	11	e.	e.	PROPN
arestyrurj-208	142	12	l.	l.	PROPN
arestyrurj-208	142	13	,	,	PUNCT
arestyrurj-208	142	14	mohamed	mohamed	PROPN
arestyrurj-208	142	15	,	,	PUNCT
arestyrurj-208	142	16	a.	a.	PROPN
arestyrurj-208	142	17	r.	r.	PROPN
arestyrurj-208	142	18	,	,	PUNCT
arestyrurj-208	142	19	williams	williams	PROPN
arestyrurj-208	142	20	,	,	PUNCT
arestyrurj-208	142	21	a.	a.	NOUN
arestyrurj-208	142	22	,	,	PUNCT
arestyrurj-208	142	23	chiles	chile	NOUN
arestyrurj-208	142	24	,	,	PUNCT
arestyrurj-208	142	25	e.	e.	PROPN
arestyrurj-208	142	26	n.	n.	PROPN
arestyrurj-208	142	27	,	,	PUNCT
arestyrurj-208	142	28	su	su	PROPN
arestyrurj-208	142	29	,	,	PUNCT
arestyrurj-208	142	30	x.	x.	PROPN
arestyrurj-208	142	31	,	,	PUNCT
arestyrurj-208	142	32	&	&	CCONJ
arestyrurj-208	142	33	putnam	putnam	PROPN
arestyrurj-208	142	34	,	,	PUNCT
arestyrurj-208	142	35	h.	h.	PROPN
arestyrurj-208	142	36	m.	m.	NOUN
arestyrurj-208	142	37	(	(	PUNCT
arestyrurj-208	142	38	2021	2021	NUM
arestyrurj-208	142	39	)	)	PUNCT
arestyrurj-208	142	40	.	.	PUNCT
arestyrurj-208	143	1	ploidy	ploidy	ADJ
arestyrurj-208	143	2	variation	variation	NOUN
arestyrurj-208	143	3	and	and	CCONJ
arestyrurj-208	143	4	its	its	PRON
arestyrurj-208	143	5	implications	implication	NOUN
arestyrurj-208	143	6	for	for	ADP
arestyrurj-208	143	7	reproduction	reproduction	NOUN
arestyrurj-208	143	8	and	and	CCONJ
arestyrurj-208	143	9	population	population	NOUN
arestyrurj-208	143	10	dynamics	dynamic	NOUN
arestyrurj-208	143	11	in	in	ADP
arestyrurj-208	143	12	two	two	NUM
arestyrurj-208	143	13	sympatric	sympatric	ADJ
arestyrurj-208	143	14	hawaiian	hawaiian	ADJ
arestyrurj-208	143	15	coral	coral	ADJ
arestyrurj-208	143	16	species	specie	NOUN
arestyrurj-208	143	17	.	.	PUNCT
arestyrurj-208	144	1	biorxiv	biorxiv	NOUN
arestyrurj-208	144	2	.	.	PUNCT
arestyrurj-208	145	1	[	[	X
arestyrurj-208	145	2	13	13	NUM
arestyrurj-208	145	3	]	]	X
arestyrurj-208	145	4	wertheim	wertheim	PROPN
arestyrurj-208	145	5	,	,	PUNCT
arestyrurj-208	145	6	b.	b.	PROPN
arestyrurj-208	145	7	,	,	PUNCT
arestyrurj-208	145	8	beukeboom	beukeboom	PROPN
arestyrurj-208	145	9	,	,	PUNCT
arestyrurj-208	145	10	l.	l.	PROPN
arestyrurj-208	145	11	w.	w.	PROPN
arestyrurj-208	145	12	,	,	PUNCT
arestyrurj-208	145	13	&	&	CCONJ
arestyrurj-208	145	14	van	van	PROPN
arestyrurj-208	145	15	de	de	PROPN
arestyrurj-208	145	16	zande	zande	PROPN
arestyrurj-208	145	17	,	,	PUNCT
arestyrurj-208	145	18	l.	l.	PROPN
arestyrurj-208	145	19	(	(	PUNCT
arestyrurj-208	145	20	2013	2013	NUM
arestyrurj-208	145	21	)	)	PUNCT
arestyrurj-208	145	22	.	.	PUNCT
arestyrurj-208	146	1	polyploidy	polyploidy	ADJ
arestyrurj-208	146	2	in	in	ADP
arestyrurj-208	146	3	animals	animal	NOUN
arestyrurj-208	146	4	:	:	PUNCT
arestyrurj-208	146	5	effects	effect	NOUN
arestyrurj-208	146	6	of	of	ADP
arestyrurj-208	146	7	gene	gene	NOUN
arestyrurj-208	146	8	expression	expression	NOUN
arestyrurj-208	146	9	on	on	ADP
arestyrurj-208	146	10	sex	sex	NOUN
arestyrurj-208	146	11	determination	determination	NOUN
arestyrurj-208	146	12	,	,	PUNCT
arestyrurj-208	146	13	evolution	evolution	NOUN
arestyrurj-208	146	14	and	and	CCONJ
arestyrurj-208	146	15	ecology	ecology	NOUN
arestyrurj-208	146	16	.	.	PUNCT
arestyrurj-208	147	1	cytogenetic	cytogenetic	ADJ
arestyrurj-208	147	2	and	and	CCONJ
arestyrurj-208	147	3	genome	genome	NOUN
arestyrurj-208	147	4	research	research	NOUN
arestyrurj-208	147	5	,	,	PUNCT
arestyrurj-208	147	6	140(2	140(2	NUM
arestyrurj-208	147	7	-	-	SYM
arestyrurj-208	147	8	4	4	NUM
arestyrurj-208	147	9	)	)	PUNCT
arestyrurj-208	147	10	,	,	PUNCT
arestyrurj-208	147	11	256269	256269	NUM
arestyrurj-208	147	12	.	.	PUNCT
arestyrurj-208	148	1	[	[	X
arestyrurj-208	148	2	14	14	NUM
arestyrurj-208	148	3	]	]	X
arestyrurj-208	148	4	williams	williams	PROPN
arestyrurj-208	148	5	,	,	PUNCT
arestyrurj-208	148	6	a.	a.	NOUN
arestyrurj-208	148	7	,	,	PUNCT
arestyrurj-208	148	8	chiles	chile	NOUN
arestyrurj-208	148	9	,	,	PUNCT
arestyrurj-208	148	10	e.	e.	PROPN
arestyrurj-208	148	11	n.	n.	PROPN
arestyrurj-208	148	12	,	,	PUNCT
arestyrurj-208	148	13	conetta	conetta	PROPN
arestyrurj-208	148	14	,	,	PUNCT
arestyrurj-208	148	15	d.	d.	PROPN
arestyrurj-208	148	16	,	,	PUNCT
arestyrurj-208	148	17	pathmanathan	pathmanathan	PROPN
arestyrurj-208	148	18	,	,	PUNCT
arestyrurj-208	148	19	j.	j.	PROPN
arestyrurj-208	148	20	s.	s.	PROPN
arestyrurj-208	148	21	,	,	PUNCT
arestyrurj-208	148	22	cleves	clef	NOUN
arestyrurj-208	148	23	,	,	PUNCT
arestyrurj-208	148	24	p.	p.	NOUN
arestyrurj-208	148	25	a.	a.	PROPN
arestyrurj-208	148	26	,	,	PUNCT
arestyrurj-208	148	27	putnam	putnam	PROPN
arestyrurj-208	148	28	,	,	PUNCT
arestyrurj-208	148	29	h.	h.	PROPN
arestyrurj-208	148	30	m.	m.	PROPN
arestyrurj-208	148	31	,	,	PUNCT
arestyrurj-208	148	32	&	&	CCONJ
arestyrurj-208	148	33	bhattacharya	bhattacharya	PROPN
arestyrurj-208	148	34	,	,	PUNCT
arestyrurj-208	148	35	d.	d.	PROPN
arestyrurj-208	148	36	(	(	PUNCT
arestyrurj-208	148	37	2021	2021	NUM
arestyrurj-208	148	38	)	)	PUNCT
arestyrurj-208	148	39	.	.	PUNCT
arestyrurj-208	149	1	metabolomic	metabolomic	ADJ
arestyrurj-208	149	2	shifts	shift	NOUN
arestyrurj-208	149	3	associated	associate	VERB
arestyrurj-208	149	4	with	with	ADP
arestyrurj-208	149	5	heat	heat	NOUN
arestyrurj-208	149	6	stress	stress	NOUN
arestyrurj-208	149	7	in	in	ADP
arestyrurj-208	149	8	coral	coral	ADJ
arestyrurj-208	149	9	holobionts	holobiont	NOUN
arestyrurj-208	149	10	.	.	PUNCT
arestyrurj-208	150	1	science	science	NOUN
arestyrurj-208	150	2	advances	advance	NOUN
arestyrurj-208	150	3	,	,	PUNCT
arestyrurj-208	150	4	7(1	7(1	NUM
arestyrurj-208	150	5	)	)	PUNCT
arestyrurj-208	150	6	,	,	PUNCT
arestyrurj-208	150	7	eabd4210	eabd4210	PROPN
arestyrurj-208	150	8	.	.	PUNCT
arestyrurj-208	151	1	[	[	X
arestyrurj-208	151	2	15	15	NUM
arestyrurj-208	151	3	]	]	X
arestyrurj-208	151	4	willis	willis	PROPN
arestyrurj-208	151	5	,	,	PUNCT
arestyrurj-208	151	6	b.	b.	PROPN
arestyrurj-208	151	7	l.	l.	PROPN
arestyrurj-208	151	8	,	,	PUNCT
arestyrurj-208	151	9	van	van	PROPN
arestyrurj-208	151	10	oppen	oppen	PROPN
arestyrurj-208	151	11	,	,	PUNCT
arestyrurj-208	151	12	m.	m.	PROPN
arestyrurj-208	151	13	j.	j.	PROPN
arestyrurj-208	151	14	,	,	PUNCT
arestyrurj-208	151	15	miller	miller	PROPN
arestyrurj-208	151	16	,	,	PUNCT
arestyrurj-208	151	17	d.	d.	PROPN
arestyrurj-208	151	18	j.	j.	PROPN
arestyrurj-208	151	19	,	,	PUNCT
arestyrurj-208	151	20	vollmer	vollmer	PROPN
arestyrurj-208	151	21	,	,	PUNCT
arestyrurj-208	151	22	s.	s.	PROPN
arestyrurj-208	151	23	v.	v.	PROPN
arestyrurj-208	151	24	,	,	PUNCT
arestyrurj-208	151	25	&	&	CCONJ
arestyrurj-208	151	26	ayre	ayre	PROPN
arestyrurj-208	151	27	,	,	PUNCT
arestyrurj-208	151	28	d.	d.	PROPN
arestyrurj-208	151	29	j.	j.	PROPN
arestyrurj-208	151	30	(	(	PUNCT
arestyrurj-208	151	31	2006	2006	NUM
arestyrurj-208	151	32	)	)	PUNCT
arestyrurj-208	151	33	.	.	PUNCT
arestyrurj-208	152	1	the	the	DET
arestyrurj-208	152	2	role	role	NOUN
arestyrurj-208	152	3	of	of	ADP
arestyrurj-208	152	4	hybridization	hybridization	NOUN
arestyrurj-208	152	5	in	in	ADP
arestyrurj-208	152	6	the	the	DET
arestyrurj-208	152	7	evolution	evolution	NOUN
arestyrurj-208	152	8	of	of	ADP
arestyrurj-208	152	9	reef	reef	ADJ
arestyrurj-208	152	10	corals	coral	NOUN
arestyrurj-208	152	11	.	.	PUNCT
arestyrurj-208	153	1	annu	annu	NOUN
arestyrurj-208	153	2	.	.	PUNCT
arestyrurj-208	154	1	rev	rev	PROPN
arestyrurj-208	154	2	.	.	PUNCT
arestyrurj-208	155	1	ecol	ecol	PROPN
arestyrurj-208	155	2	.	.	PUNCT
arestyrurj-208	156	1	evol	evol	NOUN
arestyrurj-208	156	2	.	.	PUNCT
arestyrurj-208	157	1	syst	syst	PROPN
arestyrurj-208	157	2	.	.	PROPN
arestyrurj-208	157	3	,	,	PUNCT
arestyrurj-208	157	4	37	37	NUM
arestyrurj-208	157	5	,	,	PUNCT
arestyrurj-208	157	6	489	489	NUM
arestyrurj-208	157	7	-	-	SYM
arestyrurj-208	157	8	517	517	NUM
arestyrurj-208	157	9	.	.	PUNCT
arestyrurj-208	158	1	deeksha	deeksha	PROPN
arestyrurj-208	158	2	misri	misri	PROPN
arestyrurj-208	158	3	is	be	AUX
arestyrurj-208	158	4	a	a	DET
arestyrurj-208	158	5	third	third	ADJ
arestyrurj-208	158	6	-	-	PUNCT
arestyrurj-208	158	7	year	year	NOUN
arestyrurj-208	158	8	student	student	NOUN
arestyrurj-208	158	9	in	in	ADP
arestyrurj-208	158	10	the	the	DET
arestyrurj-208	158	11	honors	honor	NOUN
arestyrurj-208	158	12	college	college	PROPN
arestyrurj-208	158	13	at	at	ADP
arestyrurj-208	158	14	rutgers	rutgers	PROPN
arestyrurj-208	158	15	university	university	PROPN
arestyrurj-208	158	16	new	new	PROPN
arestyrurj-208	158	17	brunswick	brunswick	PROPN
arestyrurj-208	158	18	.	.	PUNCT
arestyrurj-208	159	1	she	she	PRON
arestyrurj-208	159	2	is	be	AUX
arestyrurj-208	159	3	majoring	major	VERB
arestyrurj-208	159	4	in	in	ADP
arestyrurj-208	159	5	genetics	genetics	NOUN
arestyrurj-208	159	6	with	with	ADP
arestyrurj-208	159	7	a	a	DET
arestyrurj-208	159	8	certificate	certificate	NOUN
arestyrurj-208	159	9	in	in	ADP
arestyrurj-208	159	10	computational	computational	ADJ
arestyrurj-208	159	11	genetics	genetic	NOUN
arestyrurj-208	159	12	and	and	CCONJ
arestyrurj-208	159	13	a	a	DET
arestyrurj-208	159	14	minor	minor	ADJ
arestyrurj-208	159	15	in	in	ADP
arestyrurj-208	159	16	philosophy	philosophy	NOUN
arestyrurj-208	159	17	.	.	PUNCT
arestyrurj-208	160	1	over	over	ADP
arestyrurj-208	160	2	the	the	DET
arestyrurj-208	160	3	past	past	ADJ
arestyrurj-208	160	4	two	two	NUM
arestyrurj-208	160	5	years	year	NOUN
arestyrurj-208	160	6	,	,	PUNCT
arestyrurj-208	160	7	she	she	PRON
arestyrurj-208	160	8	has	have	AUX
arestyrurj-208	160	9	been	be	AUX
arestyrurj-208	160	10	working	work	VERB
arestyrurj-208	160	11	as	as	ADP
arestyrurj-208	160	12	an	an	DET
arestyrurj-208	160	13	undergraduate	undergraduate	NOUN
arestyrurj-208	160	14	researcher	researcher	NOUN
arestyrurj-208	160	15	at	at	ADP
arestyrurj-208	160	16	dr	dr	PROPN
arestyrurj-208	160	17	.	.	PROPN
arestyrurj-208	160	18	debashish	debashish	PROPN
arestyrurj-208	160	19	bhattacharya	bhattacharya	PROPN
arestyrurj-208	160	20	’s	’s	PART
arestyrurj-208	160	21	lab	lab	NOUN
arestyrurj-208	160	22	,	,	PUNCT
arestyrurj-208	160	23	which	which	PRON
arestyrurj-208	160	24	she	she	PRON
arestyrurj-208	160	25	first	first	ADV
arestyrurj-208	160	26	joined	join	VERB
arestyrurj-208	160	27	as	as	ADP
arestyrurj-208	160	28	an	an	DET
arestyrurj-208	160	29	aresty	aresty	ADJ
arestyrurj-208	160	30	summer	summer	NOUN
arestyrurj-208	160	31	science	science	NOUN
arestyrurj-208	160	32	fellow	fellow	NOUN
arestyrurj-208	160	33	during	during	ADP
arestyrurj-208	160	34	her	her	PRON
arestyrurj-208	160	35	freshman	freshman	NOUN
arestyrurj-208	160	36	year	year	NOUN
arestyrurj-208	160	37	.	.	PUNCT
arestyrurj-208	161	1	her	her	PRON
arestyrurj-208	161	2	research	research	NOUN
arestyrurj-208	161	3	focuses	focus	VERB
arestyrurj-208	161	4	on	on	ADP
arestyrurj-208	161	5	using	use	VERB
arestyrurj-208	161	6	bioinformatic	bioinformatic	ADJ
arestyrurj-208	161	7	and	and	CCONJ
arestyrurj-208	161	8	other	other	ADJ
arestyrurj-208	161	9	computational	computational	ADJ
arestyrurj-208	161	10	tools	tool	NOUN
arestyrurj-208	161	11	to	to	PART
arestyrurj-208	161	12	study	study	VERB
arestyrurj-208	161	13	coral	coral	ADJ
arestyrurj-208	161	14	genomics	genomic	NOUN
arestyrurj-208	161	15	and	and	CCONJ
arestyrurj-208	161	16	multi	multi	NOUN
arestyrurj-208	161	17	-	-	ADJ
arestyrurj-208	161	18	omics	omic	NOUN
arestyrurj-208	161	19	and	and	CCONJ
arestyrurj-208	161	20	the	the	DET
arestyrurj-208	161	21	genetic	genetic	ADJ
arestyrurj-208	161	22	and	and	CCONJ
arestyrurj-208	161	23	biomolecular	biomolecular	ADJ
arestyrurj-208	161	24	mechanisms	mechanism	NOUN
arestyrurj-208	161	25	coral	coral	ADJ
arestyrurj-208	161	26	adopt	adopt	VERB
arestyrurj-208	161	27	to	to	PART
arestyrurj-208	161	28	adapt	adapt	VERB
arestyrurj-208	161	29	to	to	ADP
arestyrurj-208	161	30	climate	climate	NOUN
arestyrurj-208	161	31	change	change	NOUN
arestyrurj-208	161	32	.	.	PUNCT
arestyrurj-208	162	1	after	after	ADP
arestyrurj-208	162	2	graduating	graduate	VERB
arestyrurj-208	162	3	from	from	ADP
arestyrurj-208	162	4	rutgers	rutger	NOUN
arestyrurj-208	162	5	,	,	PUNCT
arestyrurj-208	162	6	deeksha	deeksha	PROPN
arestyrurj-208	162	7	plans	plan	NOUN
arestyrurj-208	162	8	to	to	PART
arestyrurj-208	162	9	continue	continue	VERB
arestyrurj-208	162	10	performing	perform	VERB
arestyrurj-208	162	11	research	research	NOUN
arestyrurj-208	162	12	and	and	CCONJ
arestyrurj-208	162	13	pursue	pursue	VERB
arestyrurj-208	162	14	a	a	DET
arestyrurj-208	162	15	phd	phd	NOUN
arestyrurj-208	162	16	in	in	ADP
arestyrurj-208	162	17	bioinformatics	bioinformatics	NOUN
arestyrurj-208	162	18	.	.	PUNCT
arestyrurj-208	163	1	outside	outside	ADP
arestyrurj-208	163	2	of	of	ADP
arestyrurj-208	163	3	the	the	DET
arestyrurj-208	163	4	lab	lab	NOUN
arestyrurj-208	163	5	,	,	PUNCT
arestyrurj-208	163	6	deeksha	deeksha	PROPN
arestyrurj-208	163	7	is	be	AUX
arestyrurj-208	163	8	also	also	ADV
arestyrurj-208	163	9	involved	involve	VERB
arestyrurj-208	163	10	in	in	ADP
arestyrurj-208	163	11	the	the	DET
arestyrurj-208	163	12	women	woman	NOUN
arestyrurj-208	163	13	in	in	ADP
arestyrurj-208	163	14	stem	stem	NOUN
arestyrurj-208	163	15	community	community	NOUN
arestyrurj-208	163	16	on	on	ADP
arestyrurj-208	163	17	campus	campus	NOUN
arestyrurj-208	163	18	,	,	PUNCT
arestyrurj-208	163	19	and	and	CCONJ
arestyrurj-208	163	20	previously	previously	ADV
arestyrurj-208	163	21	served	serve	VERB
arestyrurj-208	163	22	as	as	ADP
arestyrurj-208	163	23	president	president	NOUN
arestyrurj-208	163	24	of	of	ADP
arestyrurj-208	163	25	the	the	DET
arestyrurj-208	163	26	stem	stem	NOUN
arestyrurj-208	163	27	ambassadors	ambassador	NOUN
arestyrurj-208	163	28	–	–	PUNCT
arestyrurj-208	163	29	women	woman	NOUN
arestyrurj-208	163	30	in	in	ADP
arestyrurj-208	163	31	stem	stem	NOUN
arestyrurj-208	163	32	club	club	NOUN
arestyrurj-208	163	33	at	at	ADP
arestyrurj-208	163	34	rutgers	rutger	NOUN
arestyrurj-208	163	35	.	.	PUNCT
arestyrurj-208	164	1	she	she	PRON
arestyrurj-208	164	2	is	be	AUX
arestyrurj-208	164	3	also	also	ADV
arestyrurj-208	164	4	an	an	DET
arestyrurj-208	164	5	active	active	ADJ
arestyrurj-208	164	6	member	member	NOUN
arestyrurj-208	164	7	of	of	ADP
arestyrurj-208	164	8	the	the	DET
arestyrurj-208	164	9	douglass	douglass	PROPN
arestyrurj-208	164	10	residential	residential	PROPN
arestyrurj-208	164	11	college	college	PROPN
arestyrurj-208	164	12	for	for	ADP
arestyrurj-208	164	13	women	woman	NOUN
arestyrurj-208	164	14	and	and	CCONJ
arestyrurj-208	164	15	serves	serve	VERB
arestyrurj-208	164	16	as	as	ADP
arestyrurj-208	164	17	a	a	DET
arestyrurj-208	164	18	research	research	NOUN
arestyrurj-208	164	19	advisory	advisory	NOUN
arestyrurj-208	164	20	board	board	NOUN
arestyrurj-208	164	21	mentor	mentor	NOUN
arestyrurj-208	164	22	for	for	ADP
arestyrurj-208	164	23	douglass	douglass	NOUN
arestyrurj-208	164	24	.	.	PUNCT
arestyrurj-208	165	1	previously	previously	ADV
arestyrurj-208	165	2	,	,	PUNCT
arestyrurj-208	165	3	deeksha	deeksha	PROPN
arestyrurj-208	165	4	has	have	AUX
arestyrurj-208	165	5	been	be	AUX
arestyrurj-208	165	6	involved	involve	VERB
arestyrurj-208	165	7	with	with	ADP
arestyrurj-208	165	8	aresty	aresty	NOUN
arestyrurj-208	165	9	as	as	ADP
arestyrurj-208	165	10	a	a	DET
arestyrurj-208	165	11	summer	summer	NOUN
arestyrurj-208	165	12	science	science	NOUN
arestyrurj-208	165	13	participant	participant	NOUN
arestyrurj-208	165	14	as	as	ADV
arestyrurj-208	165	15	well	well	ADV
arestyrurj-208	165	16	as	as	ADP
arestyrurj-208	165	17	a	a	DET
arestyrurj-208	165	18	peer	peer	NOUN
arestyrurj-208	165	19	reviewer	reviewer	NOUN
arestyrurj-208	165	20	for	for	ADP
arestyrurj-208	165	21	rurj	rurj	NOUN
arestyrurj-208	165	22	.	.	PUNCT
arestyrurj-208	166	1	for	for	ADP
arestyrurj-208	166	2	any	any	DET
arestyrurj-208	166	3	questions	question	NOUN
arestyrurj-208	166	4	,	,	PUNCT
arestyrurj-208	166	5	please	please	INTJ
arestyrurj-208	166	6	contact	contact	VERB
arestyrurj-208	166	7	deeksha	deeksha	NOUN
arestyrurj-208	166	8	at	at	ADP
arestyrurj-208	166	9	deeksha.misri@rutgers.edu	deeksha.misri@rutgers.edu	PROPN
arestyrurj-208	166	10	.	.	PUNCT
arestyrurj-208	167	1	mailto:deeksha.misri@rutgers.edu	mailto:deeksha.misri@rutgers.edu	PROPN