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709 

Original Article 

Biosci. J., Uberlândia, v. 31, n. 3, p. 709-718, May/June. 2015 

PHYSIOLOGICAL AND MOLECULAR CHARACTERIZATION OF 

DROUGHT RESPONSES AND SCREENING OF DROUGHT TOLERANT 

RICE VARIETIES  
 

CARACTERIZAÇÃO FISIOLÓGICA, MOLECULAR E SELEÇÃO DA RESPOSTA A 
TOLERÂNCIA À SECA EM VARIEDADES DE ARROZ 

 

Loo Lean FEN
1
; Mohd Razi ISMAIL

1
; B. ZULKARAMI

1
;  

Mohammad SHUKRI Abdul RAHMAN
1
; M. Robiul ISLAM

1, 2 

1. Laboratory of Food Crops, 
 
Institute of Tropical Agriculture Universiti Putra Malaysia, Serdang 43400, Selangor, Malaysia; 2. 

Department of Agronomy and Agricultural Extension, Rajshahi University, Rajshahi 6205, Bangladesh. razi@putra.upm.edu.my 

 

ABSTRACT: Drought stress has now become a severe threat to ensure food security in the developing world as 
well as in Malaysia. To dertermine physiological and molecular determinants of drought stress and screening of drought 

tolerant rice varieties, an experiment was conducted in a greenhouse at Universiti Putra Malaysia using eleven rice 

varieties and two irrigation regimes (well irrigated and water stressed). The present study indicated that traditional rice 

variety Puteh Perak and Siam  is superior drought tolerant while IRRI 2011- IRLON Plot no: 064, MR 220 and BRRI 

Dhan 56 are moderately drought tolerant, and  IRRI 2011- IRLON Plot no: 050 and MR 84 are drought sensitive rice 

variety. Drought tolerance of those varieties were measured based on rate of tiller reduction, leaf rolling score and drought 

score during water stress condition. Leaf rolling score was positively correlated to drought score, chlorophyll content and 

proline accumulation. Significant increase in the proline accumulation and antioxidant enzyme activities (peroxidase and 

catalase) were also observed under drought stress in all the rice varieties except Siam and Puteh Perak. All the rice 

varieties including drought tolerant and sensitive showed the existence of OsLEA 30 genes.  

 

KEYWORDS: Drought stress. Leaf rolling score. Drought score. Oryza sativa L.. OsLEA 30 gene 
 

INTRODUCTION 

 

Rice (Oryza sativa L.) is one of the three 
major food crops of the world. Being grown world 

wide, it is the staple food for more than half of the 

world’s population. It is a nutritious cereal crop, 

provides 20% calories and 15% protein 

requirements of world population. Besides being the 

cheapest source of carbohydrate and protein in Asia, 

it is also  a source of minerals and fibre. Rice straw 

and bran are important animal feed in many 

countries. About 92% of the world's rice is produced 

and consumed in Asia. A majour part of asian rice 

grown under flooded irrigation and water  is the 

main limiting factor for increased production of rice 

(AKINBILE et al., 2011). 

The lower productivity of Asian rice in most 

of the cases is attributed to various abiotic stresses 

including drought. Drought is defined as water 

stress mainly due to lack of rain during crop 

growing period. Shortage of water is the main 

obstacle for rice production in rainfed ecosystems 

since most of the rice varieties are susceptible to 

water stress (MOSTAJERAN; RAHIMI-EICHI, 

2009). Drought stress has now become a severe 

threat to ensure food security in the developing 

world including Malaysia. Although water is 

required all over the growth periods of rice plants, 

there are some critical growth stages when drought 

stress impacts seriously and create a massive 

reduction in quality and quantity of yield (ISLAM et 

al., 2011). The effect of drought on agriculture is 

extensive as it limiting crop growth and yield. Other 

than that, drought stress also involved with many 

biochemical, molecular, and physiological changes 

that influence various cellular and whole plant 

processes and reduce quality and quantity of yield 

(PRASAD; STAGGENBORG, 2008). Crop 

responses to drought stress and its tollerence level 

can be measured   by monitoring different phyto-

physiological changes at increasing drought period 

(ISLAM et al. 2011).  

Developing rice plants resistance to drought 

is one of the famous methods to increase crop 

productivity (XOCONOSTLE-CAZARES et al., 

2010). Nevertheless, this approach requires an 

understanding of physiological mechanisms at 

different developmental stage and duration of 

drought period. Hence, the aim of the present study 

is screening of drought tolerant rice varieties and to 

evaluate morphological, physiological, biochemical 

and molecular aspects of stress tolerance in different 

varieties of rice.  

 

MATERIAL AND METHODS  

 

Plant materials and growth condition  

Received: 27/08/13 

Accepted: 10/10/14 



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Physiological and molecular characterization…  FEN, L. L et al. 

Biosci. J., Uberlândia, v. 31, n. 3, p. 709-718, May/June. 2015 

This study was conducted in a greenhouse at 

Universiti Putra Malaysia using eleven rice varieties 

(Oryza sativa cv. MR4, MR9, MR84, MR219, 
MR220, Dular, Siam, Puteh Perak, BRRI Dhan 56, 

IRRI 2011-IRLON Plot No: 50 and IRRI 2011-

IRLON Plot No: 64) collected from Gene bank 

MARDI Research Station, Malaysia and Bangladesh 

Rice Research Institute (BRRI), Bangladesh. Pre-

germinated seeds of each variety were grown in a 

pot containing clay loom soil. Water stress was 

imposed by withholding irrigation at 21 days after 

sowing. Water level in well watered treatment 

(control) was maintained at 5cm above the surface 

of the soil. The experiment was arranged with 

completely randomized design (CRD) with three 

replications.  

 

Soil moisture measurement 

Soil moisture was measured by using soil 

moisture meter (HH2) at 3, 6, 9, 12 and 15 days 

after stress.  

 

Chlorophyll content (SPAD value) 

Chlorophyll content of leaf was determined 

by using SPAD meter at 11 days after stress.  

 

Leaf rolling score  
Leaf rolling was recorded mid-day at 15 

days after stress using the scale describe in Figure 1, 

according to O'Toole and Cruz, 1979. 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

Figure 1. Flat (1) and tightly rolled (5) leaf and their rolling score.  

 

Drought score 
Data’s were taken on 15 days after drought 

imposed and drought score was observed visually 

using scale according to De Datta et al. (1988)  as 

mentioned in the Table 1.  

 

Table 1. Leaf symptoms and corresponding drought score according to De Datta et al. (1988) 

Drought score Description 

1 No symptoms of stress effects 

2 Slight tip drying 

3 Tip drying extended to ¼ length in 25% of all leaves (normally the older leaves) 

4 Tip drying extended to ¼ length in at most 50% of all leaves 

5 Tip drying extended to ¼ length or more in 50% of all leaves with 25% of leaves 

fully dried 

6 50% of all leaves fully dried 

7 More than 50% but less than 70% of all leaves fully dried 

8 70% of all leaves fully dried 

9 More than 70% of all leaves fully dried 

10 All plants apparently dead 

 

 

 

 



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Physiological and molecular characterization…  FEN, L. L et al. 

Biosci. J., Uberlândia, v. 31, n. 3, p. 709-718, May/June. 2015 

Proline determination 

Free proline content was estimated 

following the procedure described by BATES et al. 

(1973). Youngest fully expanded leaves was frozen 

in the liquid nitrogen and stored in a refrigerator at -

70°C. 0.5g of frozen sample was ground with liquid 

nitrogen using pestle and mortar and homogenized 

with 10 ml of sulfosalicylic acid (3%). The 

homogenate was filtered using filter paper. 2 ml of 

the filtrate was added with 2 ml of glacial acetic 

acid and 2 ml acid ninhydrin in a test tube for one 

hour in a water bath at 95°C. The reaction mixture 

was then cooled in an ice bath for 10-15 minutes. 

After that, 4 ml of toluene was added to the reaction 

mixture and mixed vigorously with a test tube stirrer 

for 20 seconds. Supernatant layer was put into a 

quartz cuvette and measured at 520 nm using 

spectrophotometer to get the absorbance data. 

Toluene was used as blank. Proline standard curve 

was used to determine the concentration of proline 

in the samples.  

 

Peroxidase determination 

Enzyme extraction was determined using 

the procedure derived by Aebi (1984). 0.5g of 

frozen leaf sample was crushed to a fine powder 

with the present of liquid nitrogen. The mixture was 

then centrifuged at 10,000g for 10 minutes at 4°C. 

The supernatant was placed into a 2.5 ml centrifuge 

tube. Enzyme extraction was stored in a refrigerator 

at -80°C for long term uses. For peroxidase 

measurement, 1.8 ml of reaction mixture and 200 µl 

distilled water as a blank was placed in a quartz 

cuvette. 1200 µ l of 71.4mM potassium phosphate 

buffer, 200 µ l of 1 mM EDTA, 200 µl of 1 mM 

H2O2 and 200 µ l of 1 mM guaiacol were added into 

the cuvette for sample measurement. The reaction 

was started by added 200 µ l of enzyme extraction at 

420 nm for 30 seconds using spectrophotometer to 

get the absorbance data. Protein absorbance of each 

sample was measured by 40 µ l of enzyme extraction 

and 2 ml of Bradford reagent at 595 nm using 

spectrophotometer. Protein standard curve was used 

to determine the concentration of peroxidase in the 

samples.  

 

Catalase determination 

Catalase activity (CAT) was measured with 

modified procedure of AEBI (1983). 120µl enzyme 

extract was added to reaction mixture consisted 

2.8ml of 50mM phosphate buffer (pH=7.0) and 80µl 

of H2O2. Catalase activity was determined by 

measuring the increase in absorbance of H2O2 

during 1min at 240nm in a spectrophotometer with 

3ml of total reaction mixture. CAT activity was 

expressed as change in absorbance by mmolmin
-

1
mg

-1 
protein. 

 

Detection of OsLEA30 genes 
Plant material and RNA isolation: Fresh 

leaf samples were used for genomic RNA extraction 

and the RNA isolation was done with The 

NucleoSpin
®
 RNA/Protein kit. 0.1g of leaf sample 

was homogenized carefully with mortar and pestle 

in presence of liquid nitrogen. Cell lysis began when 

the extraction transferred to a test tube containing 

350µ l Buffer PL2 and 3.5µl β-mercaptoethanol. The 

mixture was vortex thoroughly. Lysate was filtrated 

through violet ring (NucleoSpin
®
Filter) and 

centrifuged for 1 min at 11,000g. The violet ring 

was dissolved with 350µ l ethanol (70%) and added 

into the homogenized lysate. The sample was loaded 

into NucleoSpin
® 

RNA/ Protein Column (light blue 

ring) and centrifuged for 30s at 11,000g. 350µ l 

MDB was added to the sample and centrifuged at 

11,000g for 1 min to dry the membrane. 95µ l 

rDNase reaction mixture was applied directly onto 

the center of the silica membrane of the column and 

incubated at room temperature for 15 min. First 

wash was done by added 200µ l Buffer RA2 to the 

light blue ring and centrifuged for 30s at 11,000g. 

The light blue ring was placed into a new collection 

tube. During second wash, 600µl of Buffer RA3 

was added to the light blue ring and centrifuged for 

30s at 11,000g. The flow through was discarded. 

250µ l Buffer RA3 was added at the third wash. The 

mixture was centrifuged for 2 min at 11,000 g in 

order to dry the silica membrane completely. The 

light blue ring was placed into a new RNase-free 

collection tube. The RNA was eluted in 60µ l 

RNase-free H2O2 and centrifuged for 1 min at 

11,000g. The nucleic acid concentration and purity 

of nucleic acid samples were measured by using 

NanoDrop 1000 Spectrophotometer. 

 

sqRT-PCR amplification: The RNA 

samples were used directly for sqRT-PCR with 

OsLEA30 primers (Wang et al., 2007). The sqRT-
PCR amplification was performed in a volume of 

20µ l containing 10µ l of KAPA SYBR
®
FAST qPCR 

Master Mix (2X), 0.2µ l of 0.2µ M of  OsLEA 30 
forward and OsLEA30 reverse primer, 0.5µ l of 
dUTP and KAPA RT Mix (50X), 4µ l of RNA 

template and 4.6µl of nuclease-free water. The step 

of cDNA synthesis was run together with 

conventional PCR amplification where the initial 

step of 42°C for 15 min was cDNA synthesis. The 

following step was inactivate RT which was set at 

95°C for 5 min. The conventional PCR 

amplification was 95°C for 5 min, followed by 32 



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Physiological and molecular characterization…  FEN, L. L et al. 

Biosci. J., Uberlândia, v. 31, n. 3, p. 709-718, May/June. 2015 

cycles of 95°C for 30 s, 59°C for 30 s and 72°C for 

1 min and 1 cycle of 5 min at 72°C for the final 

extension. 

 

Agarose gel electrophoresis of PCR products 
Amplified PCR product was analyzed by 

1.5% agarose gel electrophoresis. About 0.375g of 

agarose was melted in 25ml of 1X TBE buffer. The 

gel mixture was poured into a gel tray with comb at 

one end. After solidification, the agarose gel was 

removed carefully and kept in gel electrophoresis 

unit containing 1X TBE running buffer. 20µl of 

PCR product was loaded into the wells. The 

electrophoresis was carried out at 75 volt for about 

40 minutes.  

 

Statistical analysis 
All data were analyzed using SAS software. 

Each treatment was analyzed in three replications. 

When ANOVA showed significant treatment and 

variety effects, the Least significant Difference 

(LSD) range test was applied to compare the means 

at P<0.05.  

 

RESULTS  

 
Soil moisture content: Soil moisture in 

well watered condition was always higher than 

water stress condition as shown in Figure 2. Soil 

moisture in well watered condition was maintained 

at about 90% volumetric throughout the period of 

treatment imposed while soil moisture in water 

stress treatment decrease from 90% to 10% at 15 

days after withholding water. 

 

 

 

 

 

 

 

 

 

 

 

 

Figure 2. Soil moisture contents under well watered and water stress condition 

 

Leaf rolling score 
Water stress significantly affected the leaf 

movement of rice. Response of leaf rolling score to 

soil water stress was shown in Figure 3. According 

to this experiment, Puteh Perak obtained the lowest 

leaf rolling score among the varieties while MR 

219, Dular and IRRI 2011- IRLON Plot no: 050 

showed the highest leaf rolling score. Significant 

differences were noted between the varieties and 

leaf rolling score under water stress treatment. Leaf 

rolling score was positively correlated with drought 

score (r=0.82162), chlorophyll content (r=0.24426) 

and proline activity (r=0.93852) (Table 4). 

 

Drought score 
Water stress significantly increased leaf 

drying and increased drought score as describe in 

Figure 3. Significant differences were obtained 

between variety and drought score during water 

stress condition. MR 84, MR 220 and IRRI 2011- 

IRLON Plot no: 064 showed the lowest drought 

score while IRRI 2011- IRLON Plot no: 050 

showed the highest. Drought score was positively 

correlated with chlorophyll content (r = 0.28539) 

and proline activity (r = 0.85520) as shown in Table 

4.  

 

Number of tiller per plant 
Number of tiller per plant under water stress 

was found significantly lower than control (Table 

2). MR 4 showed the highest number of tiller per 

plant while Siam obtained the lowest number of 

tiller during well watered treatment (control). MR 4, 

MR 220, MR84 and IRRI 2011- IRLON Plot no: 

050 recorded higher number of tiller per plant 

during water stress. Number of tiller per plant was 

negatively correlated with leaf rolling score (r = -

0.44778), drought score (r = -0.49797) and proline 

activity (r = -0.45311) as shown in Table 4. 

 

 

 

 

 

 

 

 

 

0

20

40

60

80

100

0 3 6 9 12 15

S
o

il
 m

o
is

tu
re

 (
v
o

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 %

)

Days after withholding irrigation

w…



713 

Physiological and molecular characterization…  FEN, L. L et al. 

Biosci. J., Uberlândia, v. 31, n. 3, p. 709-718, May/June. 2015 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 
Figure 3. Leaf rolling score and drought score of eleven rice varieties during water stress; bars with different 

letters indicate significant differences (P<0.05) according to Least Significant Difference test. 

 

Table 2. Number of tiller per plant and chlorophyll contents in rice varieties under well watered and water 

stressed condition. 

Varieties Number of tiller per plant Chlorophyll content 

(SPAD value) 

Well watered Water stressed Well watered Water stressed 

MR 4 20.00 a 9.33 a 43.50 a 44.20 a 

MR 9 11.33 cd 7.33 ab 35.56 bc 38.56 ab 

MR 84 16.66 ab 8.00 a 40.13 ab 42.36 a 

MR 219 13.33 bc 6.66 ab 36.33 bc 41.53 ab 

MR 220 10.00 de 9.00 a 32.90 c 34.80 c 

Dular 8.33 ef 4.66 bc 38.10 ab 36.16 bc 

Siam 5.00 g 4.33 c 37.33 bc 42.40 a 

Puteh Perak 6.33 fg 4.66 bc 40.16 ab 40.10 ab 

BRRI Dhan 56 10.33 de 7.33 ab 36.23 bc 40.26 ab 

IRRI 2011- IRLON Plot no:050 15.00 bc 8.00 a 40.13 ab 43.33 a 

IRRI 2011- IRLON Plot no:064 10.00 de 6.66 ab 37.40 bc 39.73 ab 

Mean 11.48 6.90 37.97 40.31 
Means with different letters within a column indicate significant differences (P < 0.05) according to Least Significant Difference test 

 

Table 4. The correlation coefficients of the experimental traits  

 

 

Tiller Lrs Drs Chl Pro POD 

Lrs -0.44778*  

  

     

Drs 

 

-0.49797* 0.82162*     

Chl 0.06925   

   

0.24426* 

 

0.28539*  

   

   

Pro -0.45311*  0.93852* 

   

0.85520*  

   

0.20715 

   

  

POD 0.18298 

 

-0.10423 

 

0.03579 

 

0.21503 

   

0.02499   

   

 

CAT 0.15899 

   

-0.07504 

   

-0.12080 

    

-0.17913 

    

-0.04018  

    

0.40727*  

*represent the significant levels of P ≤ 0.05; Lrs – Leaf rolling score; Drs – Drought score; Chl – Chlorophyll content; Pro – Proline 

content; POD – Peroxidase activity; CAT – Catalase activity 



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Chlorophyll content (SPAD value): All 

the varieties showed higher chlorophyll content 

during well-watered condition compared with water 

stress except Puteh Perak and Dular (Table 2). MR 

4, MR 84, Siam and IRRI 2011- IRLON Plot no: 

050 showed the highest chlorophyll content while 

MR 220 showed the lowest chlorophyll content 

during water stress. However, there was no 

significant difference between variety and 

chlorophyll contents were observed in both watering 

treatments.  

Proline contents: The proline accumulation 

was higher under water stress condition compared 

with well watered condition in all the rice varieties 

(Table 3). Among the rice varieties, MR 219 

showed the highest increase in proline accumulation 

(389.05%), followed by MR 9, BRRI Dhan 56, IRRI 

2011- IRLON Plot no: 050, MR 4, Dular, MR 220, 

MR 84, IRRI 2011- IRLON Plot no: 064, Puteh 

Perak and Siam. Puteh Perak showed the lowest 

value of proline activity during water stress. 

Peroxidase activity 
The peroxidase activities in leaves increased 

for water stress and MR 4 and MR 220 showed the 

higher peroxidase activity during well watered 

condition (Table 3). MR 84 showed the highest 

peroxidase activity during water stress condition 

while MR 219 showed the lowest. All the varieties 

showed higher peroxidase activity during water 

stress condition except Siam, MR 4, MR 219 and 

MR 220. These four varieties showed reduction in 

peroxidase activity compared to well-watered 

condition.  

 

Catalase activity 

The catalase activity was not affected by 

water supply treatments but it varied within the rice 

varieties (Table 3). MR 220 and IRRI 2011- IRLON 

Plot no: 050 were the only two varieties that showed 

significant difference under different irrigation 

treatments. Generally, catalase activity decrease 

during water stress. MR 220 and MR 9 showed 

higher catalase activity during well watered 

condition while MR 84 and MR 9 showed higher 

catalase activity under water stress.  

 

OsLEA 30 gene Detection 

The OsLEA 30 gene detection of selected 

rice varieties under water stress and well watered 

was shown in Figure 4. All the varieties included 

drought tolerant (BRRI Dhan 56) and sensitive (MR 

84) variety showed the existence of OsLEA 30 gene 

in both water stress and well watered condition. The 

base pair of product was about 200 base pairs 

according to the Figure 4. 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 



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Table 3. Proline content, Peroxidase and catalase activity in rice varieties under well watered and water stressed condition. 

Varieties Proline content 

Mg/g FW 

Peroxidase activity 

µ mol/mg protein/sec 

Catalase activity 

µ mol/mg protein/min 

Well watered Water stressed Well watered Water stressed Well watered Water stressed 

MR 4 5.20 bc  22.01 a 10.00 a  8.37 ab 2278 bc 193 cd 

MR 9 4.78 d  23.18 a 8.01 ab  8.67 ab 3244 a 276 ab 

MR 84 4.85 cd  15.84 bc 8.47 ab  9.80 a 2875 ab 304 a 

MR 219 4.78 d  23.39 a 3.14 bc  2.30 c 777 e 107 ef 

MR 220 4.86 cd  19.67 ab 8.36 ab  3.99 bc 3404 a 256 ab 

Dular 5.48 ab  23.18 a 6.58 ab  7.17 ab 2221 bc 262 ab 

Siam 5.92 a  12.06 c 5.91 ab  4.68 bc 1992 c 222 bc 

Puteh Perak 5.31 bc  11.93 c 2.49 c  8.43 ab 1091 de 91 f 

BRRI Dhan 56 4.96 cd  22.44 a 4.97 ab  7.37 ab 2298 bc 194 c d 

IRRI 2011- IRLON Plot no:050 4.88 cd  20.96 a 5.48 ab  6.05 ab 1930 c 176 de 

IRRI 2011- IRLON Plot no:064 5.09 cd  16.13b c 5.60 ab  8.62 ab 1665 cd 206 cd 

Mean 5.10 19.16 6.27 6.85 2161.3 207.9 
Means with different letters within a column indicate significant differences (P < 0.05) according to Least Significant Difference test



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Figure 4. Detection of OsLEA 30 gene in selected rice varieties under both irrigation treatments by sqRT-PCR;  

NTC- Non template control; T1- water stress; T2- well watered; V1- MR4; V9- BRRI Dhan 56; V4- 

MR219; V8- Puteh Perak; V3- MR84; V6- Dular 

 

DISCUSSION 

 

The sensitivity of rice varieties to water 

stress was noted during our experiment. MR 219, 

Dular and IRRI 2011- IRLON Plot no: 050 were the 

most sensitive variety to water stress while Puteh 

Perak was less sensitive. Leaf rolling score was 

positively correlated with drought score, chlorophyll 

content and proline accumulation. According to 

Chutia and Borah (2012), traditional rice varieties 

(such as Dular, Siam and Puteh Perak) had long and 

droopy leaves with larger leaf angle, are more 

susceptible to rolling due to their ability to 

conserved water in plant tissue. Reduction of 

transpiration rate by creating microclimate is one of 

the benefits of leaf rolling (KADIOGLU; TERZI, 

2007; KADIOGLU et al., 2012).  It has been 

reported that greater leaf rolling may be an 

important indicator linked to drought tolerance and 

may have a positive impact on crop yield under 

water stress conditions. Drought score is an 

alternative method to determine drought stress 

tolerance. Drought score of all the varieties were 

ranged between 2 to 4, which indicates there nature 

as moderately resistant variety to drought stress.  

Siam, Puteh Perak, MR 4, MR 9 and IRRI 2011- 

IRLON Plot no: 050 showed higher drought score, 

and this result was similar to the findings of 

Henderson et al., 1993, that the plants with higher 

leaf area or with a larger number of plants per pot 

showed higher drought score under water stress 

condition. The number of tiller per plant decreased 

with decreasing in soil moisture content. The 

number of tiller was also associated with leaf rolling 

score, drought score and proline accumulation. 

Drought stress reduce turgor pressure in the cell and 

therefore rusticated cell elongation and expansion 

which ultimately caused reduction in plant height, 

leaf area and crop growth (FAROOQ et al., 2009;). 

The closing of stomatal aperture and inhibition of 

photosynthesis during water stress declines internal 

carbon dioxide concentration. Drought tolerance 

varieties have the potentials to survive under such 

unfavourable condition. Therefore, lower production 

of tiller during water stress is also a determinant of 

drought tolerance since traditional low tillaring 

variety variety Siam and Puteh Perak showed higher 

tolerance to drought stress. 

Proline contents in the leaf tissues increased 

significantly in all rice varieties except Siam and 

Puteh Perak (Table 3). Proline acts as an important 

osmolyte that widely produced by plants to stabilize 

membranes and maintain the conformation of 

proteins at low leaf water potentials. Free proline 

accumulation is related to drought tolerance. Many 

drought tolerant plant has high accumulation of 

proline (KADIOGLU; TERZI, 2007).  

Antioxidant enzyme activities (Peroxidase 

and Catalase activity) were not affected either by 

watering treatments or rice variety. Puteh Perak was 

the only one variety, showed significantly increase 

in peroxidase activity during water stress while MR 

220 and IRRI 2011- IRLON Plot no: 050 showed 

significantly decrease in peroxidase activity. Abedi 

and Pakniyat (2010) reported increased in 

peroxidase activity but decrease in catalase activity 

in oilseed rape. Increased in both enzyme activity 

during drought stress also reported in chickpea 

(MAFAKHERI et al., 2010), soybean (XUE et al., 

2011) and rice. Decrease in peroxidase activity 

under severe drought stress may reflect the low ROS 

scavenging capacity and increased damage in cells 

(ABEDI; PAKNIYAT, 2010).  Reduction of 

catalase activity is probably due to the inhibition of 



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enzyme synthesis or change in the assembly of 

enzyme subunits under stress conditions (ABEDI; 

PAKNIYAT, 2010).  

LEA genes are a gene family plays 
important role in protection of water stress. OsLEA 
30 gene is one of the members in LEA gene family. 
According to Wang et al. (2007), OsLEA 30  gene 
usually expressed under normal condition. 

However, this gene was expressed in all the selected 

variety and thus conclusion on drought tolerance 

variety was not able to make from this result alone. 

This is due to the limitation of end point detection of 

reverse transcriptase PCR, which do not expressed 

the results as numbers. It is hard to differentiate 

between the different fold changes on the agarose 

gel.  Hence, real time PCR is recommended for 

further experiments on similar study.  

The present study indicated Puteh Perak and 

Siam  is superior drought tollarent, IRRI 2011- 

IRLON Plot no: 064, MR 220 and BRRI Dhan 56 

are moderately drought tolerant variety while IRRI 

2011- IRLON Plot no: 050 and MR 84 were drought 

sensitive rice variety. Drought tolerant variety is 

selected based on rate of reduction of number of 

tiller, leaf rolling score and drought score. These 

traits may have greater relevance and benefit to 

future breeding program, particularly for screening 

drought tolerance at early stage.  

 

ANDACKNOWLEDGEMENT 

 
This research is supported by Long term 

Research Grant Scheme (LRGS), Food Security 

Project, Ministry of Higher Education, Malaysia. 

 

 

RESUMO: Tolerância à seca tornou-se um importante tema da segurança alimentar nos países em 
desenvolvimento, bem como na Malásia. Com o objetivo de determinar os fatores fisiológicos e moleculares da tolerância 

à seca em variedades de arroz foi conduzido um experimento em casa de vegetação na Universidade Putra da Malásia 

usando 11 genótipos e dois sistemas de irrigação (vaso contendo plantas irrigadas e estressadas). O estudo mostrou que a 

variedade Puteh Perak e Siam foram superiores em condições de estresse hídrico, enquanto IRRI 2011-IRLON – PLOT 

064 e MR 220 e BRRI Dhan 56 foram de tolerância moderada e IRRI 2011-IRLON 050 foram genótipos que apresentaram 

sensibilidade à seca. A tolerância à seca foi quantificada pela taxa de crescimento, nota visual para o enrolamento das 

folhas durante e nível de estresse durante o tempo de estresse hídrico. Enrolamento das folhas foi correlacionado com o 

nível de estresse hídrico, teor de clorofila e acúmulo de prolina. Aumento significativo no acúmulo de prolina e na 

atividade enzimática anti-oxidante (peroxidase e catalase) foram também observadas sobre estresse hídrico em todas as 

variedades de arroz tanto tolerantes quanto as sensíveis que esteve associado a existência de genes OsLEA 30. 

 

 PALAVRAS-CHAVE: Tolerância à seca. Enrolamento de folhas. Oryza sativa L. Gene OsLEA 30.  
 

 

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