id	sid	tid	token	lemma	pos
cajgh-146	1	1	cajgh_template	cajgh_template	ADJ
cajgh-146	1	2	new	new	ADJ
cajgh-146	1	3	articles	article	NOUN
cajgh-146	1	4	in	in	ADP
cajgh-146	1	5	this	this	DET
cajgh-146	1	6	journal	journal	NOUN
cajgh-146	1	7	are	be	AUX
cajgh-146	1	8	licensed	license	VERB
cajgh-146	1	9	under	under	ADP
cajgh-146	1	10	a	a	DET
cajgh-146	1	11	creative	creative	ADJ
cajgh-146	1	12	commons	common	NOUN
cajgh-146	1	13	attribution	attribution	NOUN
cajgh-146	1	14	4.0	4.0	NUM
cajgh-146	1	15	united	unite	VERB
cajgh-146	1	16	states	states	PROPN
cajgh-146	1	17	license	license	NOUN
cajgh-146	1	18	.	.	PUNCT
cajgh-146	2	1	this	this	DET
cajgh-146	2	2	journal	journal	NOUN
cajgh-146	2	3	is	be	AUX
cajgh-146	2	4	published	publish	VERB
cajgh-146	2	5	by	by	ADP
cajgh-146	2	6	the	the	DET
cajgh-146	2	7	university	university	NOUN
cajgh-146	2	8	library	library	NOUN
cajgh-146	2	9	system	system	NOUN
cajgh-146	2	10	of	of	ADP
cajgh-146	2	11	the	the	DET
cajgh-146	2	12	university	university	PROPN
cajgh-146	2	13	of	of	ADP
cajgh-146	2	14	pittsburgh	pittsburgh	PROPN
cajgh-146	2	15	as	as	ADP
cajgh-146	2	16	part	part	NOUN
cajgh-146	2	17	of	of	ADP
cajgh-146	2	18	its	its	PRON
cajgh-146	2	19	d	d	NOUN
cajgh-146	2	20	-	-	PUNCT
cajgh-146	2	21	scribe	scribe	VERB
cajgh-146	2	22	digital	digital	ADJ
cajgh-146	2	23	publishing	publishing	NOUN
cajgh-146	2	24	program	program	NOUN
cajgh-146	2	25	and	and	CCONJ
cajgh-146	2	26	is	be	AUX
cajgh-146	2	27	cosponsored	cosponsor	VERB
cajgh-146	2	28	by	by	ADP
cajgh-146	2	29	the	the	DET
cajgh-146	2	30	university	university	PROPN
cajgh-146	2	31	of	of	ADP
cajgh-146	2	32	pittsburgh	pittsburgh	PROPN
cajgh-146	2	33	press	press	NOUN
cajgh-146	2	34	.	.	PUNCT
cajgh-146	3	1	the	the	DET
cajgh-146	3	2	first	first	ADJ
cajgh-146	3	3	kazakh	kazakh	ADJ
cajgh-146	3	4	whole	whole	ADJ
cajgh-146	3	5	genomes	genome	NOUN
cajgh-146	3	6	:	:	PUNCT
cajgh-146	3	7	the	the	DET
cajgh-146	3	8	first	first	ADJ
cajgh-146	3	9	report	report	NOUN
cajgh-146	3	10	of	of	ADP
cajgh-146	3	11	ngs	ng	NOUN
cajgh-146	3	12	data	datum	NOUN
cajgh-146	3	13	ainur	ainur	NOUN
cajgh-146	3	14	akilzhanova1	akilzhanova1	VERB
cajgh-146	3	15	,	,	PUNCT
cajgh-146	3	16	ulykbek	ulykbek	ADJ
cajgh-146	3	17	kairov1	kairov1	PROPN
cajgh-146	3	18	,	,	PUNCT
cajgh-146	3	19	saule	saule	PROPN
cajgh-146	3	20	rakhimova1	rakhimova1	PROPN
cajgh-146	3	21	,	,	PUNCT
cajgh-146	3	22	askhat	askhat	PRON
cajgh-146	3	23	molkenov1	molkenov1	PROPN
cajgh-146	3	24	,	,	PUNCT
cajgh-146	3	25	arang	arang	PROPN
cajgh-146	3	26	rhie2	rhie2	PROPN
cajgh-146	3	27	,	,	PUNCT
cajgh-146	3	28	jong	jong	PROPN
cajgh-146	3	29	-	-	PUNCT
cajgh-146	3	30	il	il	PROPN
cajgh-146	3	31	kim2	kim2	PROPN
cajgh-146	3	32	,	,	PUNCT
cajgh-146	3	33	jeong	jeong	PROPN
cajgh-146	3	34	-	-	PUNCT
cajgh-146	3	35	sun	sun	PROPN
cajgh-146	3	36	seo2	seo2	NOUN
cajgh-146	3	37	,	,	PUNCT
cajgh-146	3	38	zhaxybay	zhaxybay	ADJ
cajgh-146	3	39	zhumadilov1	zhumadilov1	PROPN
cajgh-146	3	40	1center	1center	NUM
cajgh-146	3	41	for	for	ADP
cajgh-146	3	42	life	life	NOUN
cajgh-146	3	43	sciences	science	NOUN
cajgh-146	3	44	,	,	PUNCT
cajgh-146	3	45	nazarbayev	nazarbayev	ADJ
cajgh-146	3	46	university	university	NOUN
cajgh-146	3	47	,	,	PUNCT
cajgh-146	3	48	astana	astana	PROPN
cajgh-146	3	49	,	,	PUNCT
cajgh-146	3	50	kazakhstan	kazakhstan	PROPN
cajgh-146	3	51	;	;	PUNCT
cajgh-146	3	52	2department	2department	NUM
cajgh-146	3	53	of	of	ADP
cajgh-146	3	54	biochemistry	biochemistry	NOUN
cajgh-146	3	55	and	and	CCONJ
cajgh-146	3	56	molecular	molecular	ADJ
cajgh-146	3	57	biology	biology	NOUN
cajgh-146	3	58	,	,	PUNCT
cajgh-146	3	59	genomic	genomic	NOUN
cajgh-146	3	60	medicine	medicine	PROPN
cajgh-146	3	61	institute	institute	PROPN
cajgh-146	3	62	,	,	PUNCT
cajgh-146	3	63	seoul	seoul	PROPN
cajgh-146	3	64	national	national	PROPN
cajgh-146	3	65	university	university	PROPN
cajgh-146	3	66	college	college	PROPN
cajgh-146	3	67	of	of	ADP
cajgh-146	3	68	medicine	medicine	NOUN
cajgh-146	3	69	,	,	PUNCT
cajgh-146	3	70	south	south	PROPN
cajgh-146	3	71	korea	korea	PROPN
cajgh-146	3	72	vol	vol	NOUN
cajgh-146	3	73	.	.	PROPN
cajgh-146	4	1	3	3	NUM
cajgh-146	4	2	,	,	PUNCT
cajgh-146	4	3	suppl	suppl	ADJ
cajgh-146	4	4	.	.	PUNCT
cajgh-146	5	1	(	(	PUNCT
cajgh-146	5	2	2014	2014	NUM
cajgh-146	5	3	)	)	PUNCT
cajgh-146	5	4	|	|	ADV
cajgh-146	5	5	issn	issn	VERB
cajgh-146	5	6	2166	2166	NUM
cajgh-146	5	7	-	-	SYM
cajgh-146	5	8	7403	7403	NUM
cajgh-146	5	9	(	(	PUNCT
cajgh-146	5	10	online	online	ADJ
cajgh-146	5	11	)	)	PUNCT
cajgh-146	5	12	doi	doi	NOUN
cajgh-146	5	13	10.5195	10.5195	NUM
cajgh-146	5	14	/	/	SYM
cajgh-146	5	15	cajgh.2014.146	cajgh.2014.146	PROPN
cajgh-146	5	16	|	|	ADV
cajgh-146	5	17	http://cajgh.pitt.edu	http://cajgh.pitt.edu	VERB
cajgh-146	5	18	http://www.library.pitt.edu/	http://www.library.pitt.edu/	PROPN
cajgh-146	5	19	http://www.pitt.edu/	http://www.pitt.edu/	NOUN
cajgh-146	5	20	http://www.library.pitt.edu/articles/digpubtype/index.html	http://www.library.pitt.edu/articles/digpubtype/index.html	PUNCT
cajgh-146	6	1	http://www.upress.pitt.edu/upressindex.aspx	http://www.upress.pitt.edu/upressindex.aspx	PRON
cajgh-146	6	2	http://creativecommons.org/licenses/by/3.0/us/	http://creativecommons.org/licenses/by/3.0/us/	NOUN
cajgh-146	6	3	akilzhanova	akilzhanova	VERB
cajgh-146	6	4	this	this	DET
cajgh-146	6	5	work	work	NOUN
cajgh-146	6	6	is	be	AUX
cajgh-146	6	7	licensed	license	VERB
cajgh-146	6	8	under	under	ADP
cajgh-146	6	9	a	a	DET
cajgh-146	6	10	creative	creative	ADJ
cajgh-146	6	11	commons	common	NOUN
cajgh-146	6	12	attribution	attribution	NOUN
cajgh-146	6	13	4.0	4.0	NUM
cajgh-146	6	14	united	unite	VERB
cajgh-146	6	15	states	states	PROPN
cajgh-146	6	16	license	license	NOUN
cajgh-146	6	17	.	.	PUNCT
cajgh-146	7	1	this	this	DET
cajgh-146	7	2	journal	journal	NOUN
cajgh-146	7	3	is	be	AUX
cajgh-146	7	4	published	publish	VERB
cajgh-146	7	5	by	by	ADP
cajgh-146	7	6	the	the	DET
cajgh-146	7	7	university	university	NOUN
cajgh-146	7	8	library	library	NOUN
cajgh-146	7	9	system	system	NOUN
cajgh-146	7	10	of	of	ADP
cajgh-146	7	11	the	the	DET
cajgh-146	7	12	university	university	PROPN
cajgh-146	7	13	of	of	ADP
cajgh-146	7	14	pittsburgh	pittsburgh	PROPN
cajgh-146	7	15	as	as	ADP
cajgh-146	7	16	part	part	NOUN
cajgh-146	7	17	of	of	ADP
cajgh-146	7	18	its	its	PRON
cajgh-146	7	19	d	d	NOUN
cajgh-146	7	20	-	-	PUNCT
cajgh-146	7	21	scribe	scribe	VERB
cajgh-146	7	22	digital	digital	ADJ
cajgh-146	7	23	publishing	publishing	NOUN
cajgh-146	7	24	program	program	NOUN
cajgh-146	7	25	and	and	CCONJ
cajgh-146	7	26	is	be	AUX
cajgh-146	7	27	cosponsored	cosponsor	VERB
cajgh-146	7	28	by	by	ADP
cajgh-146	7	29	the	the	DET
cajgh-146	7	30	university	university	PROPN
cajgh-146	7	31	of	of	ADP
cajgh-146	7	32	pittsburgh	pittsburgh	PROPN
cajgh-146	7	33	press	press	NOUN
cajgh-146	7	34	.	.	PUNCT
cajgh-146	8	1	central	central	ADJ
cajgh-146	8	2	asian	asian	ADJ
cajgh-146	8	3	journal	journal	NOUN
cajgh-146	8	4	of	of	ADP
cajgh-146	8	5	global	global	ADJ
cajgh-146	8	6	health	health	NOUN
cajgh-146	8	7	volume	volume	NOUN
cajgh-146	8	8	3	3	NUM
cajgh-146	8	9	,	,	PUNCT
cajgh-146	8	10	suppl	suppl	ADJ
cajgh-146	8	11	.	.	PUNCT
cajgh-146	9	1	(	(	PUNCT
cajgh-146	9	2	2014	2014	NUM
cajgh-146	9	3	)	)	PUNCT
cajgh-146	9	4	|	|	ADV
cajgh-146	9	5	issn	issn	VERB
cajgh-146	9	6	2166	2166	NUM
cajgh-146	9	7	-	-	SYM
cajgh-146	9	8	7403	7403	NUM
cajgh-146	9	9	(	(	PUNCT
cajgh-146	9	10	online	online	ADJ
cajgh-146	9	11	)	)	PUNCT
cajgh-146	9	12	|	|	ADV
cajgh-146	9	13	doi	doi	X
cajgh-146	9	14	10.5195	10.5195	NUM
cajgh-146	9	15	/	/	SYM
cajgh-146	9	16	cajgh.2014.146	cajgh.2014.146	PROPN
cajgh-146	10	1	|	|	ADV
cajgh-146	10	2	http://cajgh.pitt.edu	http://cajgh.pitt.edu	VERB
cajgh-146	10	3	abstract	abstract	ADJ
cajgh-146	10	4	introduction	introduction	NOUN
cajgh-146	10	5	:	:	PUNCT
cajgh-146	10	6	the	the	DET
cajgh-146	10	7	human	human	ADJ
cajgh-146	10	8	genome	genome	NOUN
cajgh-146	10	9	sequence	sequence	NOUN
cajgh-146	10	10	will	will	AUX
cajgh-146	10	11	underpin	underpin	VERB
cajgh-146	10	12	human	human	ADJ
cajgh-146	10	13	biology	biology	NOUN
cajgh-146	10	14	and	and	CCONJ
cajgh-146	10	15	medicine	medicine	NOUN
cajgh-146	10	16	in	in	ADP
cajgh-146	10	17	the	the	DET
cajgh-146	10	18	next	next	ADJ
cajgh-146	10	19	century	century	NOUN
cajgh-146	10	20	,	,	PUNCT
cajgh-146	10	21	providing	provide	VERB
cajgh-146	10	22	a	a	DET
cajgh-146	10	23	single	single	ADJ
cajgh-146	10	24	,	,	PUNCT
cajgh-146	10	25	essential	essential	ADJ
cajgh-146	10	26	reference	reference	NOUN
cajgh-146	10	27	to	to	ADP
cajgh-146	10	28	all	all	DET
cajgh-146	10	29	genetic	genetic	ADJ
cajgh-146	10	30	information	information	NOUN
cajgh-146	10	31	.	.	PUNCT
cajgh-146	11	1	extraordinary	extraordinary	ADJ
cajgh-146	11	2	technological	technological	ADJ
cajgh-146	11	3	advances	advance	NOUN
cajgh-146	11	4	and	and	CCONJ
cajgh-146	11	5	decreases	decrease	NOUN
cajgh-146	11	6	in	in	ADP
cajgh-146	11	7	the	the	DET
cajgh-146	11	8	cost	cost	NOUN
cajgh-146	11	9	of	of	ADP
cajgh-146	11	10	dna	dna	PROPN
cajgh-146	11	11	sequencing	sequencing	NOUN
cajgh-146	11	12	have	have	AUX
cajgh-146	11	13	made	make	VERB
cajgh-146	11	14	the	the	DET
cajgh-146	11	15	possibility	possibility	NOUN
cajgh-146	11	16	of	of	ADP
cajgh-146	11	17	whole	whole	ADJ
cajgh-146	11	18	genome	genome	NOUN
cajgh-146	11	19	sequencing	sequence	VERB
cajgh-146	11	20	(	(	PUNCT
cajgh-146	11	21	wgs	wgs	NOUN
cajgh-146	11	22	)	)	PUNCT
cajgh-146	11	23	feasible	feasible	ADJ
cajgh-146	11	24	as	as	ADP
cajgh-146	11	25	a	a	DET
cajgh-146	11	26	highly	highly	ADV
cajgh-146	11	27	accessible	accessible	ADJ
cajgh-146	11	28	test	test	NOUN
cajgh-146	11	29	for	for	ADP
cajgh-146	11	30	numerous	numerous	ADJ
cajgh-146	11	31	indications	indication	NOUN
cajgh-146	11	32	.	.	PUNCT
cajgh-146	12	1	the	the	DET
cajgh-146	12	2	international	international	ADJ
cajgh-146	12	3	project	project	NOUN
cajgh-146	12	4	“	"	PUNCT
cajgh-146	12	5	genetic	genetic	ADJ
cajgh-146	12	6	architecture	architecture	NOUN
cajgh-146	12	7	of	of	ADP
cajgh-146	12	8	kazakh	kazakh	ADJ
cajgh-146	12	9	population	population	NOUN
cajgh-146	12	10	”	"	PUNCT
cajgh-146	12	11	is	be	AUX
cajgh-146	12	12	well	well	ADV
cajgh-146	12	13	underway	underway	ADJ
cajgh-146	12	14	to	to	PART
cajgh-146	12	15	determine	determine	VERB
cajgh-146	12	16	the	the	DET
cajgh-146	12	17	complete	complete	ADJ
cajgh-146	12	18	dna	dna	NOUN
cajgh-146	12	19	.	.	PUNCT
cajgh-146	13	1	next	next	ADJ
cajgh-146	13	2	generation	generation	NOUN
cajgh-146	13	3	sequencing	sequence	VERB
cajgh-146	13	4	is	be	AUX
cajgh-146	13	5	a	a	DET
cajgh-146	13	6	powerful	powerful	ADJ
cajgh-146	13	7	tool	tool	NOUN
cajgh-146	13	8	for	for	ADP
cajgh-146	13	9	genetic	genetic	ADJ
cajgh-146	13	10	analysis	analysis	NOUN
cajgh-146	13	11	,	,	PUNCT
cajgh-146	13	12	which	which	PRON
cajgh-146	13	13	will	will	AUX
cajgh-146	13	14	enable	enable	VERB
cajgh-146	13	15	us	we	PRON
cajgh-146	13	16	to	to	PART
cajgh-146	13	17	uncover	uncover	VERB
cajgh-146	13	18	the	the	DET
cajgh-146	13	19	association	association	NOUN
cajgh-146	13	20	of	of	ADP
cajgh-146	13	21	loci	loci	NOUN
cajgh-146	13	22	at	at	ADP
cajgh-146	13	23	specific	specific	ADJ
cajgh-146	13	24	sites	site	NOUN
cajgh-146	13	25	in	in	ADP
cajgh-146	13	26	the	the	DET
cajgh-146	13	27	genome	genome	NOUN
cajgh-146	13	28	associated	associate	VERB
cajgh-146	13	29	with	with	ADP
cajgh-146	13	30	disease	disease	NOUN
cajgh-146	13	31	.	.	PUNCT
cajgh-146	14	1	the	the	DET
cajgh-146	14	2	aim	aim	NOUN
cajgh-146	14	3	of	of	ADP
cajgh-146	14	4	this	this	DET
cajgh-146	14	5	study	study	NOUN
cajgh-146	14	6	was	be	AUX
cajgh-146	14	7	to	to	PART
cajgh-146	14	8	introduce	introduce	VERB
cajgh-146	14	9	first	first	ADJ
cajgh-146	14	10	data	datum	NOUN
cajgh-146	14	11	on	on	ADP
cajgh-146	14	12	wgs	wgs	NOUN
cajgh-146	14	13	of	of	ADP
cajgh-146	14	14	6	6	NUM
cajgh-146	14	15	kazakh	kazakh	ADJ
cajgh-146	14	16	individuals	individual	NOUN
cajgh-146	14	17	.	.	PUNCT
cajgh-146	15	1	methods	method	NOUN
cajgh-146	15	2	:	:	PUNCT
cajgh-146	15	3	this	this	DET
cajgh-146	15	4	pilot	pilot	NOUN
cajgh-146	15	5	study	study	NOUN
cajgh-146	15	6	is	be	AUX
cajgh-146	15	7	among	among	ADP
cajgh-146	15	8	the	the	DET
cajgh-146	15	9	first	first	ADJ
cajgh-146	15	10	wgs	wgs	NOUN
cajgh-146	15	11	performed	perform	VERB
cajgh-146	15	12	on	on	ADP
cajgh-146	15	13	6	6	NUM
cajgh-146	15	14	healthy	healthy	ADJ
cajgh-146	15	15	kazakh	kazakh	ADJ
cajgh-146	15	16	individuals	individual	NOUN
cajgh-146	15	17	,	,	PUNCT
cajgh-146	15	18	using	use	VERB
cajgh-146	15	19	next	next	ADJ
cajgh-146	15	20	generation	generation	NOUN
cajgh-146	15	21	sequencing	sequence	VERB
cajgh-146	15	22	platform	platform	NOUN
cajgh-146	15	23	hiseq2000	hiseq2000	PROPN
cajgh-146	15	24	,	,	PUNCT
cajgh-146	15	25	illumina	illumina	NOUN
cajgh-146	15	26	by	by	ADP
cajgh-146	15	27	manufacturer	manufacturer	PROPN
cajgh-146	15	28	’s	’s	PART
cajgh-146	15	29	protocols	protocol	NOUN
cajgh-146	15	30	.	.	PUNCT
cajgh-146	16	1	all	all	PRON
cajgh-146	16	2	generated	generate	VERB
cajgh-146	16	3	*	*	NOUN
cajgh-146	16	4	.bcl	.bcl	NOUN
cajgh-146	16	5	files	file	NOUN
cajgh-146	16	6	were	be	AUX
cajgh-146	16	7	simultaneously	simultaneously	ADV
cajgh-146	16	8	converted	convert	VERB
cajgh-146	16	9	and	and	CCONJ
cajgh-146	16	10	demultiplexed	demultiplexe	VERB
cajgh-146	16	11	using	use	VERB
cajgh-146	16	12	bcl2fasta	bcl2fasta	PROPN
cajgh-146	16	13	application	application	NOUN
cajgh-146	16	14	.	.	PUNCT
cajgh-146	17	1	alignment	alignment	NOUN
cajgh-146	17	2	of	of	ADP
cajgh-146	17	3	sequence	sequence	NOUN
cajgh-146	17	4	reads	read	NOUN
cajgh-146	17	5	performed	perform	VERB
cajgh-146	17	6	using	use	VERB
cajgh-146	17	7	bwa	bwa	PROPN
cajgh-146	17	8	-	-	PUNCT
cajgh-146	17	9	mem	mem	NOUN
cajgh-146	17	10	against	against	ADP
cajgh-146	17	11	human	human	ADJ
cajgh-146	17	12	b19	b19	NOUN
cajgh-146	17	13	reference	reference	NOUN
cajgh-146	17	14	genome	genome	NOUN
cajgh-146	17	15	.	.	PUNCT
cajgh-146	18	1	sorting	sorting	NOUN
cajgh-146	18	2	,	,	PUNCT
cajgh-146	18	3	removing	remove	VERB
cajgh-146	18	4	of	of	ADP
cajgh-146	18	5	intermediate	intermediate	ADJ
cajgh-146	18	6	files	file	NOUN
cajgh-146	18	7	,	,	PUNCT
cajgh-146	18	8	*	*	PUNCT
cajgh-146	18	9	.bam	.bam	NOUN
cajgh-146	18	10	files	file	NOUN
cajgh-146	18	11	assembling	assembling	NOUN
cajgh-146	18	12	,	,	PUNCT
cajgh-146	18	13	and	and	CCONJ
cajgh-146	18	14	marking	mark	VERB
cajgh-146	18	15	duplicates	duplicate	NOUN
cajgh-146	18	16	were	be	AUX
cajgh-146	18	17	performed	perform	VERB
cajgh-146	18	18	using	use	VERB
cajgh-146	18	19	picardtools	picardtool	NOUN
cajgh-146	18	20	package	package	NOUN
cajgh-146	18	21	.	.	PUNCT
cajgh-146	19	1	gatk	gatk	NOUN
cajgh-146	19	2	haplotype	haplotype	NOUN
cajgh-146	19	3	caller	caller	NOUN
cajgh-146	19	4	tool	tool	NOUN
cajgh-146	19	5	was	be	AUX
cajgh-146	19	6	used	use	VERB
cajgh-146	19	7	for	for	ADP
cajgh-146	19	8	variant	variant	NOUN
cajgh-146	19	9	calling	calling	NOUN
cajgh-146	19	10	.	.	PUNCT
cajgh-146	20	1	clinvar	clinvar	PROPN
cajgh-146	20	2	,	,	PUNCT
cajgh-146	20	3	snpedia	snpedia	NOUN
cajgh-146	20	4	,	,	PUNCT
cajgh-146	20	5	and	and	CCONJ
cajgh-146	20	6	cosmic	cosmic	ADJ
cajgh-146	20	7	databases	database	NOUN
cajgh-146	20	8	were	be	AUX
cajgh-146	20	9	processed	process	VERB
cajgh-146	20	10	to	to	PART
cajgh-146	20	11	identify	identify	VERB
cajgh-146	20	12	clinical	clinical	ADJ
cajgh-146	20	13	genomic	genomic	ADJ
cajgh-146	20	14	variants	variant	NOUN
cajgh-146	20	15	in	in	ADP
cajgh-146	20	16	6	6	NUM
cajgh-146	20	17	kazakh	kazakh	ADJ
cajgh-146	20	18	whole	whole	ADJ
cajgh-146	20	19	genomes	genome	NOUN
cajgh-146	20	20	.	.	PUNCT
cajgh-146	21	1	java	java	PROPN
cajgh-146	21	2	runtime	runtime	PROPN
cajgh-146	21	3	environment	environment	PROPN
cajgh-146	21	4	and	and	CCONJ
cajgh-146	21	5	r.	r.	PROPN
cajgh-146	21	6	bioconductor	bioconductor	PROPN
cajgh-146	21	7	packages	package	NOUN
cajgh-146	21	8	were	be	AUX
cajgh-146	21	9	installed	instal	VERB
cajgh-146	21	10	to	to	PART
cajgh-146	21	11	perform	perform	VERB
cajgh-146	21	12	raw	raw	ADJ
cajgh-146	21	13	data	datum	NOUN
cajgh-146	21	14	processing	processing	NOUN
cajgh-146	21	15	and	and	CCONJ
cajgh-146	21	16	run	run	VERB
cajgh-146	21	17	program	program	NOUN
cajgh-146	21	18	scripts	script	NOUN
cajgh-146	21	19	.	.	PUNCT
cajgh-146	22	1	results	result	NOUN
cajgh-146	22	2	:	:	PUNCT
cajgh-146	22	3	the	the	DET
cajgh-146	22	4	sequence	sequence	NOUN
cajgh-146	22	5	alignment	alignment	NOUN
cajgh-146	22	6	and	and	CCONJ
cajgh-146	22	7	mapping	mapping	NOUN
cajgh-146	22	8	procedures	procedure	NOUN
cajgh-146	22	9	on	on	ADP
cajgh-146	22	10	reference	reference	NOUN
cajgh-146	22	11	genome	genome	NOUN
cajgh-146	22	12	hg19	hg19	PROPN
cajgh-146	22	13	of	of	ADP
cajgh-146	22	14	each	each	DET
cajgh-146	22	15	6	6	NUM
cajgh-146	22	16	healthy	healthy	ADJ
cajgh-146	22	17	kazakh	kazakh	ADJ
cajgh-146	22	18	individual	individual	NOUN
cajgh-146	22	19	were	be	AUX
cajgh-146	22	20	completed	complete	VERB
cajgh-146	22	21	.	.	PUNCT
cajgh-146	23	1	between	between	ADP
cajgh-146	23	2	87,308,581,400	87,308,581,400	NUM
cajgh-146	23	3	and	and	CCONJ
cajgh-146	23	4	107,526,741,301	107,526,741,301	NUM
cajgh-146	23	5	total	total	ADJ
cajgh-146	23	6	base	base	NOUN
cajgh-146	23	7	pairs	pair	NOUN
cajgh-146	23	8	were	be	AUX
cajgh-146	23	9	sequenced	sequence	VERB
cajgh-146	23	10	with	with	ADP
cajgh-146	23	11	average	average	ADJ
cajgh-146	23	12	coverage	coverage	NOUN
cajgh-146	23	13	x29.85	x29.85	PROPN
cajgh-146	23	14	.	.	PUNCT
cajgh-146	24	1	between	between	SCONJ
cajgh-146	24	2	98.85	98.85	NUM
cajgh-146	24	3	%	%	NOUN
cajgh-146	24	4	and	and	CCONJ
cajgh-146	24	5	99.58	99.58	NUM
cajgh-146	24	6	%	%	NOUN
cajgh-146	24	7	base	base	NOUN
cajgh-146	24	8	pairs	pair	NOUN
cajgh-146	24	9	were	be	AUX
cajgh-146	24	10	totally	totally	ADV
cajgh-146	24	11	mapped	map	VERB
cajgh-146	24	12	and	and	CCONJ
cajgh-146	24	13	on	on	ADP
cajgh-146	24	14	average	average	ADJ
cajgh-146	24	15	96.07	96.07	NUM
cajgh-146	24	16	%	%	NOUN
cajgh-146	24	17	were	be	AUX
cajgh-146	24	18	properly	properly	ADV
cajgh-146	24	19	paired	pair	VERB
cajgh-146	24	20	.	.	PUNCT
cajgh-146	25	1	het	het	PROPN
cajgh-146	25	2	/	/	SYM
cajgh-146	25	3	hom	hom	NOUN
cajgh-146	25	4	and	and	CCONJ
cajgh-146	25	5	ti	ti	NOUN
cajgh-146	25	6	/	/	SYM
cajgh-146	25	7	tv	tv	NOUN
cajgh-146	25	8	ratios	ratio	NOUN
cajgh-146	25	9	for	for	ADP
cajgh-146	25	10	each	each	DET
cajgh-146	25	11	whole	whole	ADJ
cajgh-146	25	12	genome	genome	NOUN
cajgh-146	25	13	ranged	range	VERB
cajgh-146	25	14	from	from	ADP
cajgh-146	25	15	1.35	1.35	NUM
cajgh-146	25	16	to	to	ADP
cajgh-146	25	17	1.52	1.52	NUM
cajgh-146	25	18	and	and	CCONJ
cajgh-146	25	19	from	from	ADP
cajgh-146	25	20	2.07	2.07	NUM
cajgh-146	25	21	to	to	ADP
cajgh-146	25	22	2.08	2.08	NUM
cajgh-146	25	23	,	,	PUNCT
cajgh-146	25	24	respectively	respectively	ADV
cajgh-146	25	25	.	.	PUNCT
cajgh-146	26	1	we	we	PRON
cajgh-146	26	2	compared	compare	VERB
cajgh-146	26	3	and	and	CCONJ
cajgh-146	26	4	analyzed	analyze	VERB
cajgh-146	26	5	each	each	DET
cajgh-146	26	6	genome	genome	NOUN
cajgh-146	26	7	with	with	ADP
cajgh-146	26	8	on	on	ADP
cajgh-146	26	9	existing	exist	VERB
cajgh-146	26	10	clinical	clinical	ADJ
cajgh-146	26	11	databases	database	NOUN
cajgh-146	26	12	clinvar	clinvar	PROPN
cajgh-146	26	13	,	,	PUNCT
cajgh-146	26	14	snpedia	snpedia	NOUN
cajgh-146	26	15	,	,	PUNCT
cajgh-146	26	16	cosmic	cosmic	ADJ
cajgh-146	26	17	and	and	CCONJ
cajgh-146	26	18	found	find	VERB
cajgh-146	26	19	from	from	ADP
cajgh-146	26	20	20	20	NUM
cajgh-146	26	21	to	to	PART
cajgh-146	26	22	25	25	NUM
cajgh-146	26	23	,	,	PUNCT
cajgh-146	26	24	from	from	ADP
cajgh-146	26	25	269	269	NUM
cajgh-146	26	26	to	to	ADP
cajgh-146	26	27	288	288	NUM
cajgh-146	26	28	,	,	PUNCT
cajgh-146	26	29	from	from	ADP
cajgh-146	26	30	7	7	NUM
cajgh-146	26	31	to	to	PART
cajgh-146	26	32	12	12	NUM
cajgh-146	26	33	snp	snp	ADJ
cajgh-146	26	34	records	record	NOUN
cajgh-146	26	35	,	,	PUNCT
cajgh-146	26	36	respectively	respectively	ADV
cajgh-146	26	37	.	.	PUNCT
cajgh-146	27	1	the	the	DET
cajgh-146	27	2	availability	availability	NOUN
cajgh-146	27	3	of	of	ADP
cajgh-146	27	4	a	a	DET
cajgh-146	27	5	reference	reference	NOUN
cajgh-146	27	6	kazakh	kazakh	ADJ
cajgh-146	27	7	genome	genome	NOUN
cajgh-146	27	8	sequences	sequence	NOUN
cajgh-146	27	9	provides	provide	VERB
cajgh-146	27	10	the	the	DET
cajgh-146	27	11	basis	basis	NOUN
cajgh-146	27	12	for	for	ADP
cajgh-146	27	13	studying	study	VERB
cajgh-146	27	14	the	the	DET
cajgh-146	27	15	nature	nature	NOUN
cajgh-146	27	16	of	of	ADP
cajgh-146	27	17	sequence	sequence	NOUN
cajgh-146	27	18	variation	variation	NOUN
cajgh-146	27	19	,	,	PUNCT
cajgh-146	27	20	particularly	particularly	ADV
cajgh-146	27	21	single	single	ADJ
cajgh-146	27	22	nucleotide	nucleotide	ADJ
cajgh-146	27	23	polymorphisms	polymorphism	NOUN
cajgh-146	27	24	.	.	PUNCT
cajgh-146	28	1	conclusion	conclusion	NOUN
cajgh-146	28	2	:	:	PUNCT
cajgh-146	28	3	the	the	DET
cajgh-146	28	4	first	first	ADJ
cajgh-146	28	5	whole	whole	ADJ
cajgh-146	28	6	genome	genome	NOUN
cajgh-146	28	7	sequencing	sequencing	NOUN
cajgh-146	28	8	of	of	ADP
cajgh-146	28	9	kazakhs	kazakh	NOUN
cajgh-146	28	10	were	be	AUX
cajgh-146	28	11	performed	perform	VERB
cajgh-146	28	12	.	.	PUNCT
cajgh-146	29	1	in	in	ADP
cajgh-146	29	2	this	this	DET
cajgh-146	29	3	pilot	pilot	NOUN
cajgh-146	29	4	study	study	NOUN
cajgh-146	29	5	,	,	PUNCT
cajgh-146	29	6	we	we	PRON
cajgh-146	29	7	identified	identify	VERB
cajgh-146	29	8	snps	snps	PROPN
cajgh-146	29	9	associated	associate	VERB
cajgh-146	29	10	with	with	ADP
cajgh-146	29	11	different	different	ADJ
cajgh-146	29	12	conditions	condition	NOUN
cajgh-146	29	13	.	.	PUNCT
cajgh-146	30	1	further	further	ADJ
cajgh-146	30	2	studies	study	NOUN
cajgh-146	30	3	of	of	ADP
cajgh-146	30	4	wgs	wgs	NOUN
cajgh-146	30	5	on	on	ADP
cajgh-146	30	6	kazakh	kazakh	ADJ
cajgh-146	30	7	population	population	NOUN
cajgh-146	30	8	are	be	AUX
cajgh-146	30	9	needed	need	VERB
cajgh-146	30	10	to	to	PART
cajgh-146	30	11	identify	identify	VERB
cajgh-146	30	12	possible	possible	ADJ
cajgh-146	30	13	unique	unique	ADJ
cajgh-146	30	14	genetic	genetic	ADJ
cajgh-146	30	15	variants	variant	NOUN
cajgh-146	30	16	in	in	ADP
cajgh-146	30	17	kazakhs	kazakh	NOUN
cajgh-146	30	18	.	.	PUNCT
cajgh-146	31	1	keywords	keyword	NOUN
cajgh-146	31	2	:	:	PUNCT
cajgh-146	31	3	whole	whole	ADJ
cajgh-146	31	4	genome	genome	NOUN
cajgh-146	31	5	sequencing	sequencing	NOUN
cajgh-146	31	6	,	,	PUNCT
cajgh-146	31	7	kazakh	kazakh	ADJ
cajgh-146	31	8	population	population	NOUN
cajgh-146	31	9	http://www.library.pitt.edu/	http://www.library.pitt.edu/	PROPN
cajgh-146	31	10	http://www.pitt.edu/	http://www.pitt.edu/	NOUN
cajgh-146	31	11	http://www.library.pitt.edu/articles/digpubtype/index.html	http://www.library.pitt.edu/articles/digpubtype/index.html	PUNCT
cajgh-146	32	1	http://www.upress.pitt.edu/upressindex.aspx	http://www.upress.pitt.edu/upressindex.aspx	X