untitled European Journal of Chemistry 2 (3) (2011) 347‐355 European Journal of Chemistry ISSN 2153‐2249 (Print) / ISSN 2153‐2257 (Online)  2011 EURJCHEM DOI:10.5155/eurjchem.2.3.347‐355.168 European Journal of Chemistry Journal homepage: www.eurjchem.com Synthesis of novel pyrimidine and fused pyrimidine derivatives Mahmoud Refaee Mahmoud, Ahmed Kamel El‐Ziaty, Mahmoud Fawzy Ismail* and Sayed Ahmed Shiba Chemistry Department, Faculty of Science, Ain Shams University, Abbassia, Cairo, 11566, Egypt *Corresponding author at: Chemistry Department, Faculty of Science, Ain Shams University, Abbassia, Cairo, 11566, Egypt. Tel.: +0224831836; fax: +202.24831836. E‐mail address: fawzy2010@sci.asu.edu.eg (M.F. Ismail). ARTICLE INFORMATION ABSTRACT Received: 15 June 2010 Received in revised form: 26 October 2010 Accepted: 08 November 2010 Online: 30 September 2011 KEYWORDS 4‐Amino‐2‐(benzylthio)‐6‐(4‐methoxyphenyl)pyrimidine‐5‐carbonitrile (1) was prepared by treatment of s‐benzylthiuronium chloride with 2‐(4‐methoxybenzylidene)malononitrile in ethanolic sodium hydroxide with hydrazine hydrate to afford the hydrazino derivative 2, which was allowed to react with different electrophilic reagents to give the pyrimidine derivatives 3‐12. The proclivity of (E)‐2‐cyano‐3‐(4‐nitrophenyl)acrylamide (13) towards carbon and nitrogen nucleophiles was also investigated. IR, 1H NMR and mass spectra for all the synthesized compounds were discussed. All derived compounds were investigated for anti avian influenza (H5N1) virus activity and compared with zanamivir as control drug. All the synthesized compounds didn’t possess any antiviral activity. s‐Benzylthiuronium chloride Activated nitriles Pyrimidines Triazolopyrimidine derivatives Antiviral activity Cytotoxicity 1. Introduction The recent wide applications of pyrimidine derivatives as anti‐tumor [1], anti‐HIV‐1 [2], analgesic [3], anti‐depressive [4], anti‐convulsant [5], anti‐microbial [6], herbicides [7,8], anti‐ inflammatory and antioxidant [3,9], beside their uses as a precursors in the synthesis of fused ring compounds like, triazolopyrimidines as antibacterial agents [10], fungicidal [11], and anti‐tumor agents [12], imidazopyrimidines as antimycobacterial [13] and pyridopyrimidines as antibacterial agents [14] make them worthy to be synthesized and evaluated as drugs. We report here synthesis of pyrimidine and fused pyrimidines by developed, simple, convenient and efficient procedure. Also, this modified method is fast, cheap and unequivocal preparation with improved yields. 2. Experimental 2.1. Instrumentation Melting points are uncorrected and were measured by an electric melting point apparatus (G‐K). The IR spectra were recorded on a Pye‐Unicam SP1200 spectrophotometer using KBr Wafer technique. The 1H NMR spectra were determined on a Varian GEMINI 300 MHz NMR spectrophotometer using CDCl3 or DMSO‐d6 as solvent and TMS as an internal standard. All chemical shifts are in ppm downfield from TMS. The elemental analysis was carried out in faculty of Science, Ain Shams University. MS were recorded on Shimadzu GC‐MS QP1000EX instrument in micro analytical lab, Cairo University. The monitoring of the progress of all reactions and homogeneity of the synthesized compound was carried out by TLC. 2.2. Synthesis 2.2.1. 4‐amino‐2‐(benzylthio)‐6‐(4‐methoxyphenyl) pyrimidine‐5‐carbonitrile (1) To a solution of s‐benzylthiuronium chloride (2.02 g, 0.01 mol) in water (10 mL), sodium hydroxide (1 N, 10 mL) was added dropwise with shaking, the pale green precipitate so formed, was dissolved in warmed ethanol (10 mL), then a solution of 2‐(4‐methoxybenzylidene)malononitrile (1.84 g, 0.01 mol) in ethanol (20 mL) was added and the whole mixture was heated under reflux for 5h. The solid formed after cooling was collected by filtration and recrystallized from toluene to give 1 as buff crystals (Scheme 1). Yield: 82%. M.p.: 171‐173 °C. FT‐IR (KBr, cm‐1): 3461, 3298 υ(NH2), 2204 υ(C≡N), 1626 υ(C=N). 1H NMR (300 MHz, CDCl3): 8.03 (d, J=8.4 Hz, 2H, Ar‐H), 7.40‐7.27 (m, 5H, Ar‐H), 7.00 (d, J=8.7 Hz, 2H, Ar‐H), 5.67 (s, 2H, CH2), 4.45 (br.s, 2H, NH2, exchangeable with D2O), 3.89 (s, 3H, OCH3). MS (EI, m/z): 348 (M+). Anal. Calcd. for C19H16N4OS: C, 65.50; H, 4.63; N, 16.08; S, 9.20. Found: C, 65.52; H, 4.59; N, 16.02; S, 9.12%. 2.2.2. 4‐amino‐2‐hydrazinyl‐6‐(4‐methoxyphenyl) pyrimidine‐5‐carbonitrile (2) A mixture of 1 (3.48 g, 0.01 mol) and hydrazine hydrate 80% (0.015 mol) in ethanol (50 mL) was heated under reflux for 3h. The colourless solid separated on hot was collected by filtration and then recrystallized from dioxane to give 2 as colourless crystals (Scheme 2). Yield 35%. M.p.: 300‐302 °C. FT‐ IR (KBr, cm‐1): 3454, 3302 υ(NH2, NH), 2194 υ(C≡N), 1634 υ(C=N). MS (EI, m/z): 256 (M+). Anal. Calcd. for C12H12N6O: C, 56.24; H, 4.72; N, 32.79. Found: C, 56.13; H, 4.62; N, 32.81%. 348 Mahmoud et al. / European Journal of Chemistry 2 (3) (2011) 347‐351 Scheme 1 2.2.3. 4‐amino‐2‐(3,5‐dimethyl‐1H‐pyrazol‐1‐yl)‐6‐(4‐ methoxyphenyl)pyrimidine‐5‐carbonitrile (3) A mixture of compound 2 (1.0 g, 3.9 mmol) and pentane‐ 2,4‐dione (0.4 ml, 3.9 mmol) in ethanol (25 mL) was heated under reflux for 6h. The solid deposited while hot was collected by filtration and crystallized from dioxane to give 3 as colourless crystals (Scheme 2). Yield 86%. M.p.: 280‐282 °C. FT‐ IR (KBr, cm‐1): 3477, 3273 υ(NH2), 2206 υ(C≡N), 1648 υ(C=N). 1H NMR (300 MHz, DMSO‐d6): 7.96 (d, J=9 Hz, 2H, Ar‐H), 7.13 (d, J=8.8 Hz, 2H, Ar‐H), 6.1 (s, 1H, =C4‐H), 4.2 (br.s, 2H, NH2, exchangeable with D2O), 3.86 (s, 3H, OCH3), 3.3 (s, 3H, C3‐CH3), 2.1 (s, 3H, C5‐CH3). MS (EI, m/z): 320 (M+). Anal. Calcd. for C17H16N6O: C, 63.74; H, 5.03; N, 26.23. Found: C, 63.75; H, 4.47; N, 26.25%. 2.2.4. N‐(5‐Cyano‐2‐(2,2‐diacetylhydrazinyl)‐6‐(4‐methoxy phenyl)pyrimidin‐4‐yl) acetamide (4) A solution of 2 (1.0 g, 3.9 mmol) in freshly distilled acetic anhydride (10 mL) was heated under reflux for 6h. After cooling, the reaction mixture was poured on ice cold water. The crude deposited was collected and crystallized from ethanol to give 4 as colourless crystals (Scheme 2). Yield 76%. M.p.: 182‐ 184 °C. FT‐IR (KBr, cm‐1): 3368 υ(NH), 2216 υ(C≡N), 1716 υ(C=O). 1H NMR (300 MHz, CDCl3): 8.17 (s, 1H, NH, exchangeable with D2O), 8.03 (d, J=8.8 Hz, 2H, Ar‐H), 7.27 (s, 1H, NH, exchangeable with D2O), 7.03 (d, J=8.8 Hz, 2H, Ar‐H), 3.91 (s, 3H, OCH3), 2.85 (s, 3H, CH3), 2.44 (s, 6H, 2COCH3). MS (EI, m/z(%)): 382 (M+). Anal. Calcd. for C18H18N6O4: C, 56.54; H, 4.74; N, 21.98. Found: C, 56.37; H, 4.62; N, 21.81%. 2.2.5. N'‐(4‐amino‐5‐cyano‐6‐(4‐methoxyphenyl)pyrimidin‐ 2‐yl)furan‐2‐carbohydrazide (5) A mixture of 2 (1.0 g, 3.9 mmol) and furoyl chloride (0.51 mL, 3.9 mmol) in pyridine (20 mL) was heated under reflux for 3h. After cooling the reaction mixture acidified on ice cold acetic acid. The deposited was filtered off, washed several times with cold water and recrystallized from toluene to give 5 as pale yellow crystals (Scheme 2). Yield 52%. M.p.: 110‐112 °C. FT‐IR (KBr, cm‐1): 3455, 3318, 3219 υ(NH2, NH), 2206 υ(C≡N), 1680 υ(C=O) (hydrazide). MS (EI, m/z): 350 (M+). Anal. Calcd. for C17H14N6O3: C, 58.28; H, 4.03; N, 23.99. Found: C, 58.35; H, 4.12; N, 24.14%. 2.2.6. 4‐amino‐2‐(1,3‐dioxoisoindolin‐2‐ylamino)‐6‐(4‐ methoxyphenyl)pyrimidine‐5‐carbonitrile (6) A mixture of 2 (1.0 g, 3.9 mmol) and phthalic anhydride (0.58 g, 3.9 mmol) in glacial acetic acid was heated under reflux for one hour. The white solid deposited while hot was collected by filtration and then recrystallized from dioxane to give 6 as colourless crystals (Scheme 2). Yield 75%. M.p.: over 300 °C. FT‐IR (KBr, cm‐1): 3414, 3374, 3333, 3168 υ(NH2, NH), 2205 υ(C≡N), 1791, 1731 υ(C=O) (coupling bands). MS (EI, m/z): 386 (M+). Anal. Calcd. for C20H14N6O3: C, 62.17; H, 3.65; N, 21.75. Found: C, 62.18; H, 3.63; N, 21.76%. 2.2.7. Ethyl 2‐(4‐amino‐5‐cyano‐6‐(4‐methoxyphenyl) pyrimidin‐2‐yl)hydrazinecarboxylate (7) A mixture of 2 (1.0 g, 3.9 mmol) and ethyl chloroformate (0.4 mL, 3.9 mmol) in pyridine (20 mL) was heated under reflux for 6h. The reaction mixture was concentrated, and acidified with cold dilute acetic acid. The solid separated out was filtered off, washed several times with cold water and recrystallized from ethanol to give 7 as colourless crystals (Scheme 2). Yield 84%. M.p.: 201‐203 °C. FT‐IR (KBr, cm‐1): 3468, 3345, 3312, 3173 υ(NH2), 2202 υ(C≡N), 1706 υ(C=O) (ester). 1H NMR (300 MHz, DMSO‐d6): 9.2‐9.1 (d, 2H, 2NH, exchangeable with D2O), 7.82 (d, J=8.6 Hz, 2H, Ar‐H), 7.08 (d, J=8.6 Hz, 2H, Ar‐H), 4.1 (q, 2H, COOCH2CH3),4.0 (br.s, 2H, NH2, exchangeable with D2O), 3.8 (s, 3H, OCH3), 1.2‐1.05 (t, 3H, COOCH2CH3). MS (EI, m/z): 328 (M+). Anal. Calcd. for C15H16N6O3: C, 54.87; H, 4.91; N, 25.60. Found: C, 54.82; H, 4.86; N, 25.61%. Mahmoud et al. / European Journal of Chemistry 2 (3) (2011) 347‐351 349 N N Ar NC H2N S Ph 1 N N Ar NC H2N N H NH2 O O Cl O O py.N N Ar NC H2N NH N H O O N N Ar NC H2N N H H N O O Cl O O N N Ar NC N H N H NH3COC py. O O O 6 5 7 4 3 2 EtOH/ EtOH/ N2H4.H2O N N Ar NC H2N N H N O O N N Ar NC H2N N N MeMe Ac 2 O Ac O H CH3 CH3 O O Scheme 2 Scheme 3 2.2.8. 7‐amino‐5‐(4‐methoxyphenyl)‐3‐thioxo‐2,3‐dihydro‐ [1,2,4]triazolo[4,3‐a]pyrimidine‐6‐carbonitrile (8) A mixture of 2 (1.0 g, 3.9 mmol) and carbon disulphide (5 mL) in ethanolic KOH 10% (1.0 g KOH dissolve in 1.0 mL water and 9 mL ethanol) was heated under reflux on water bath for 16h. After cooling the reaction mixture was acidified with cold dilute acetic acid. The canary yellow solid that separated out was filtered off, washed several times with cold water and recrystallized from ethanol to give 8 as canary yellow crystals (Scheme 3). Yield 48%. M.p.: 278‐280 °C. FT‐IR (KBr, cm‐1): 3292, 3213, 3198 υ(NH2, NH), 2210 υ(C≡N), 1632 υ(C=N), 1259 υ(C=S). MS (EI, m/z): 298 (M+). Anal. Calcd. for C13H10N6OS: C, 52.34; H, 3.38; N, 28.17; S, 10.75. Found: C, 52.35; H, 3.36; N, 28.19; S, 10.74%. 2.2.9. 7‐amino‐3‐(3,4‐dimethoxyphenyl)‐5‐(4‐methoxy phenyl)‐[1,2,4]triazolo[4,3‐a] pyramidine‐6‐carbonitrile (9) A mixture of 2 (1.0 g, 3.9 mmol) and 2‐(3,4‐ dimethoxybenzylidene) malononitrile (0.83 g, 3.9 mmol) in ethanol (25 mL) and drops of glacial acetic acid was heated under reflux for 6h. After evaporation of the solvent in vacuo, the solid obtained was collected by filtration and recrystallized from toluene to give 9 as pale yellow crystals (Scheme 4). Yield 74%. M.p.: 217‐220 °C. FT‐IR (KBr, cm‐1): 3460, 3292 υ(NH2), 2200 υ(C≡N), 1643 υ(C=N). 1H NMR (300 MHz, DMSO‐d6): 8.12 (s, 1H, Ar‐H), 7.86 (d, J=8.4 Hz, 2H, Ar‐H), 7.30‐7.10 (br.s, 2H, NH2, exchangeable with D2O), 7.18‐6.98 (m, 4H, Ar‐H), 3.83 (s, 6H, 2OCH3), 3.79 (s, 3H, OCH3). MS (EI, m/z): 403 (M+1). Anal. Calcd. for C21H18N6O3: C, 62.68; H, 4.51; N, 20.88. Found: C, 62.59; H, 4.48; N, 20.76%. 350 Mahmoud et al. / European Journal of Chemistry 2 (3) (2011) 347‐351 Scheme 4 2.2.10. (E)‐2‐(2‐(4‐nitrobenzylidene)hydrazinyl)‐4‐amino‐6‐ (4‐methoxyphenyl)pyrimidine‐5‐carbonitrile (10) A mixture of 2 (1.0 g, 3.9 mmol) and p‐nitrobenzaldehyde (0.59 g, 3.9 mmol) in ethanol (25 mL) was stirred under reflux for 10 min. The solid separated was collected by filtration and then recrystallized from ethanol/dioxane mixture to give 10 as yellow crystals (Scheme 5). Yield 98%. M.p.: over 300 °C. FT‐IR (KBr, cm‐1): 3478, 3294, 3149 υ(NH2), 2201 υ(C≡N), 1647 υ(C=N). 1H NMR (300 MHz, DMSO‐d6): 11.7 (s, 1H, NH, exchangeable with D2O), 8.29 (m, 3H, (2H, Ar‐H) and N=CH), 7.92 (d, J=9 Hz, 2H, Ar‐H), 7.84 (d, J=9 Hz, 2H, Ar‐H), 7.6‐7.5 (br.s, 2H, NH2, exchangeable with D2O), 7.10 (d, J=9 Hz, 2H, Ar‐ H), 3.84 (s, 3H, OCH3). MS (EI, m/z): 389 (M+). Anal. Calcd. for C19H15N7O3: C, 58.61; H, 3.88; N, 25.18. Found: C, 58.52; H, 3.75; N, 25.09%. 2.2.11. 7‐amino‐5‐(4‐methoxyphenyl)‐3‐(phenylamino)‐ [1,2,4]triazolo[4,3‐a]pyrimidine‐6‐carbonitrile (11) A mixture of 2 (1.0 g, 3.9 mmol) and phenyl isothiocyanate (0.53 mL, 3.9 mmol) in pyridine (25 mL) was heated under reflux for 6h. After cooling the reaction mixture was poured on ice cold acetic acid. The buff solid that separated out was filtered off, washed several times with cold water and recrystallized from benzene to give 11 (Scheme 5). Yield 62%. M.p.: 152‐315 °C. FT‐IR (KBr, cm‐1): 3204 υ(NH2, NH), 2204 υ(C≡N). 1H NMR (300 MHz, DMSO‐d6): 9.75 (s, 1H, NH, exchangeable with D2O), 7.49‐7.30 (m, 5H, Ar‐H), 6.99‐6.96 (d, J=8.4 Hz, 2H, Ar‐H), 6.56‐6.55 (d, J=8.7 Hz, 2H, Ar‐H), 4.9 (br.s, 2H, NH2, exchangeable with D2O), 3.34 (s, 3H, OCH3). MS (EI, m/z): 228 (M‐ph, ‐2CN). Anal. Calcd. for C19H15N7O: C, 63.86; H, 4.23; N, 27.44. Found: C, 63.87; H, 4.20; N, 27.45%. 2.2.12. N'‐(4‐amino‐5‐cyano‐6‐(4‐methoxyphenyl)pyrimidin‐ 2‐yl)acetohydrazide (12) A mixture of 2 (1.0 g, 3.9 mmol) and diethyl oxalate (0.53 mL, 3.9 mmol) in n‐butanol (20 mL) in the presence of acetic acid (5 mL), was heated under reflux for 10h. After cooling, a colourless solid was separated out, filtered off, dryed and recrystallized from ethanol/dioxane mixture to give 12 as colourless crystals (Scheme 5). Yield 83%. M.p.: 268‐270 °C. FT‐ IR (KBr, cm‐1): 3448, 3361, 3299 υ(NH2, NH), 2204 υ(C≡N), 1668 υ(C=O) (amide), 1641 υ(C=N). MS (EI, m/z): 298 (M+). Anal. Calcd. for C14H14N6O2: C, 56.37; H, 4.73; N, 28.17. Found: C, 56.27; H, 4.69; N, 28.19%. 2.2.13. (Z)‐5‐(4‐nitrobenzylidene)‐6‐amino‐2‐thioxo‐2,3‐ dihydropyrimidin‐4(5H)‐one (14) and 7‐amino‐4‐hydroxy‐2‐ mercapto‐5‐(4‐nitrophenyl)‐5,8‐dihydropyrido[2,3‐d] pyramidine‐6‐carbonitrile (15) A mixture of 13 (2.17 g, 0.01 mol) with 6‐amino‐2‐thioxo‐ 2,3‐dihydropyrimidin‐4(1H)‐one (1.43 g, 0.01 mol) in absolute ethanol (50 mL) in the presence of piperidine (1.0 mL) was heated with stirring for 2h. The solid separated while hot was collected by filtration and recrystallized from dioxane to give 14 as yellow crystals, yield (13%). Acidification of the alkaline filtrate after evaporation of the solvent with cold dilute acetic acid left a yellow solid which filtered off, washed several times with cold water, dried and recrystallized from DMF to give 15 as buff crystals (Schemes 6,7). (Z)‐5‐(4‐nitrobenzylidene)‐6‐amino‐2‐thioxo‐2,3‐dihydro pyrimidin‐4(5H)‐one (14): Yellow crystals. Yield 13%. M.p.: 236‐238 °C. FT‐IR (KBr, cm‐1): 3443, 3410, 3155 υ(NH2, NH), 1672 υ(C=O), 1632 υ(C=N), 1346 υ(C=S). MS (EI, m/z): 276 (M+). Anal. Calcd. for C11H8N4O3S: C, 47.82; H, 2.92; N, 20.28; S, 11.61. Found: C, 47.73; H, 2.89; N, 20.29; S, 11.53%. 7‐amino‐4‐hydroxy‐2‐mercapto‐5‐(4‐nitrophenyl)‐5,8‐ dihydropyrido[2,3‐d] pyramidine‐6‐carbonitrile (15): Buff crystals. Yield 56.6%. M.p.: over 300 °C. FT‐IR (KBr, cm‐1): 3431, 3325 υ(NH2), 2225 υ(C≡N), 1639 υ(C=N). MS (EI, m/z): 342 (M+). Anal. Calcd. for C14H10N6O3S: C, 49.12; H, 2.94; N, 24.55; S, 9.37. Found: C, 48.89; H, 2.87; N, 24.36; S, 9.26%. Mahmoud et al. / European Journal of Chemistry 2 (3) (2011) 347‐351 351 -- EtOH/ - Scheme 5 2.2.14. (E)‐2‐(5‐(4‐nitrobenzylidene)‐4‐oxo‐4,5‐dihydro thiazol‐2‐yl)acetonitrile (17) A mixture of 13 (2.17 g, 0.01 mol) with 2‐(4‐oxo‐4,5‐ dihydrothiazol‐2‐yl)acetonitrile (1.4 g, 0.01 mol) in absolute ethanol (50 mL) in the presence of piperidine (1.0 mL) was heated with stirring under reflux for 8h. After cooling the reaction mixture was poured on ice and acidified with dilute acetic acid. The separated solid was filtered off, washed several times with cold water and recrystallized from ethanol to give 17 as red crystals (Scheme 7). Yield 62.8%. M.p.: 194‐196 °C. FT‐IR (KBr, cm‐1): 2208 υ(C≡N), 1675 υ(C=O). MS (EI, m/z): 273 (M+). Anal. Calcd. for C12H7N3O3S: C, 52.74; H, 2.58; N, 15.38; S, 11.73. Found: C, 52.71; H, 2.48; N, 15.41; S, 11.73%. 2.2.15. 1,2‐diamino‐5‐cyano‐4‐(4‐nitrophenyl)‐6‐oxo‐1,6‐ dihydropyridine‐3‐carboxamide (18) and (3E,5Z)‐3‐amino‐ 6‐cyano‐5‐(4‐nitrophenyl)‐7‐oxo‐2,7‐dihydro‐1H‐1,2‐ diazepine‐4‐carboxamide (19) A mixture of 13 (2.17 g, 0.01 mol) with 2‐ cyanoacetohydrazide (0.99 g, 0.01 mol) in absolute ethanol (50 mL) in the presence of piperidine (1.0 mL) was heated with stirring under reflux for 3h. The yellow solid deposited while hot was collected by filtration and recrystallized from ethanol to give 18. Acidification of the alkaline filtrate with ice cold dilute acetic acid left a yellow solid product which filtered off, washed several times with cold water, dried and recrystallized from toluene to give 19 (Scheme 7). 1,2‐diamino‐5‐cyano‐4‐(4‐nitrophenyl)‐6‐oxo‐1,6‐dihydro pyridine‐3‐carboxamide (18): Yield 46.5%. M.p.: 201‐203 °C. FT‐IR (KBr, cm‐1): 3494, 3403, 3358, 3289, 3186 υ(NH2), 2207 υ(C≡N), 1698, 1656 υ(C=O). MS (EI, m/z): 314 (M+). Anal. Calcd. for C13H10N6O4: C, 49.69; H, 3.21; N, 26.74. Found: C, 49.62; H, 3.18; N, 26.72%. (3E,5Z)‐3‐amino‐6‐cyano‐5‐(4‐nitrophenyl)‐7‐oxo‐2,7‐ dihydro‐1H‐1,2‐diazepine‐4‐carboxamide (19): Yield 15.7%. M.p.: 229‐230 °C. FT‐IR (KBr, cm‐1): 3329, 3197 υ(NH2, NH), 2210 υ(C≡N), 1674 υ(C=O). 1H NMR (300 MHz, DMSO‐d6): 8.26 (d, J=8.4 Hz, 2H, Ar‐H), 7.55 (d, J=8.7 Hz, 2H, Ar‐H), 7.0 (br.s, 1H, NH, exchangeable with D2O), 5.58 (br.s, 2H, NH2, exchangeable with D2O). MS (EI, m/z): 314 (M+). Anal. calcd. for C13H10N6O4: C, 49.69; H, 3.21; N, 26.74. Found: C, 49.67; H, 3.16; N, 26.77%. 2.2.16. 6‐cyano‐7‐(4‐nitrophenyl)‐5‐oxo‐2‐thioxo‐1,2,3,5‐ tetrahydro‐[1,2,4]triazolo[1,5‐a] pyridine‐8‐carboxamide (20) A mixture of 18 (1.0 g, 3.2 mmol) and carbon disulphide (5 mL) in ethanolic KOH 10% (10 mL) was heated under reflux on water bath for 16h. After cooling the reaction mixture was poured on ice and acidified with dilute acetic acid. The precipitated solid was filtered off, washed several times with cold water and recrystallized from methanol to give 20 as light brown crystals (Scheme 7). Yield 32%. M.p.: over 300 °C. FT‐IR (KBr, cm‐1): 3421 υ(NH2), 2213 υ(C≡N), 1690 υ(C=O), 1621 υ(C=N), 1342 υ(C=S). MS (EI, m/z): 322 (M‐H2S). Anal. Calcd. for C14H8N6O4S: C, 47.19; H, 2.26; N, 23.59; S, 9.00. Found: C, 47.15; H, 2.24; N, 23.54; S, 8.98%. 352 Mahmoud et al. / European Journal of Chemistry 2 (3) (2011) 347‐351 Scheme 6 2.3. Antiviral activity 2.3.1. Methodology: MTT assay (Cytotoxicity assay) Samples were diluted with Dulbecco's Modified Eagle's Medium (DMEM) to desired concentrations. Stock solutions of the test compounds were prepared in 10 % DMSO in ddH2O. The cytotoxic activity of the extracts was tested in Madin Darby Canine kidney (MDCK) cells by using the 3‐(4,5‐ dimethylthiazol‐2‐yl)‐2,5‐diphenyltetrazolium bromide (MTT) method [15] with minor modification. Briefly, the cells were seeded in 96 well‐plates (100 µL/well at a density of 3×105 cells/mL) and incubated for 24 hrs at 37 oC in 5% CO2. After 24 hrs, cells were treated with various concentrations of the tested compounds in triplicates. After further 24 hrs, the supernatant was discarded and cell monolayers were washed with sterile phosphate buffer saline(PBS) 3 times and MTT solution (20 µL of 5 mg/mL stock solution) was added to each well and incubated at 37 °C for 4 hrs followed by medium aspiration. In each well, the formed formazan crystals were dissolved with 200 µL of acidified isopropanol (0.04 M HCl in absolute isopropanol). Absorbance of formazan solutions were measured at λmax 540 nm with 620 nm as a reference wavelength using a multi‐well plate reader. The percentage of cytotoxicity compared to the untreated cells was determined with the equation (1). % Cytotoxicity = Abs. of cells without treatment‐Abs. of cells with (1) Abs. of cells without treatment The plot of % cytotoxicity versus sample concentration was used to calculate the concentration, which exhibited 50% cytotoxicity (LD50). 2.3.2. Antiviral assay The antiviral activity of the compounds was determined using cytopathogenicity (CPE) assay against avian influenza virus (H5N1). Stock solutions of the test compounds were prepared in DMSO at a concentration of 10 mg/mL. Cells grown to confluency in 96‐well plates, were infected with 100 µL of stock virus. After an adsorption period of 2 hrs at 37 oC, virus was removed and serial dilutions of the compounds were added. Maintenance DMEM with 2% FBS was added (100 µL/well).The cultures were further incubated at 37 oC for 3 days, until complete CPE was observed in the infected and untreated virus control. The determination of the anti‐influenza virus activity of the compounds was based on virus‐induced cytopathogenicity of H5N1‐infected MDCK cells, measured at day 4 post virus infection by the MTT colorimetric method [16]. An absorbance of formazan was detected by a multi‐well plate reader at 540 nm with 620 nm reference wavelength. 3. Results and discussion 3.1. Synthesis The utility of activated nitriles in synthesis of a wide variety of heterocyclic systems [17‐26] encouraged us to synthesize pyrimidine derivatives from relatively simple starting materials. The title compound 1 was prepared by reaction of 2‐(4‐methoxybenzylidene)malononitrile with s‐benzylthiuro‐ nium chloride in refluxing ethanolic sodium hydroxide according the simple mechanism in (Scheme 1). Hydrazinolysis of 1 afforded the sulfur free compound which identified as 4‐amino‐2‐hydrazinyl‐6‐(4‐methoxy phenyl)pyrimidine‐5‐carbonitrile (2) [6] (Scheme 2). Recently, it has been reported [27] that the hydrazino pyrimidines can be considered as key starting materials for the synthesis of diverse nitrogen bridgehead compounds. This prompted us to reinvestigate the proclivity of compound 2 with electrophilic reagents such as, pentane‐2,4‐dione, acetic anhydride, furoyl chloride, phthalic anhydride, ethyl chloro‐ formate, carbon disulphide, 2‐(3,4‐dimethoxybenzylidene) malononitrile, p‐nitrobenzaldehyde, phenyl isothiocyanate and diethyl oxalate with the aim of preparing new pyrimidine derivatives which might have chemotherapeutic and biological evaluation. Mahmoud et al. / European Journal of Chemistry 2 (3) (2011) 347‐351 353 CN NH2O N H NH O H2N S N NH O H2N S H Ar N N N H Ar H H2N NC NH O CN NO NC Ar NH2 NH2 NH2 O 18 (46.6%) N N NC Ar O NH2 O NH2 19 (15.7%) EtOH pip. 14 15 13 Ar=C6H4-NO2:4 NO NC Ar NH HN NH2 O S CS2 KOH/EtOH 20 N S O NC N S O NC EtOH/pip. ArH 17 Et O H/ pi p. H2 N H H 16 N S O NC EtoH/ O2N O H OH SH Ar 16 Scheme 7 Thus, treatment of the 2‐hydrazino derivative 2 with pentane‐2,4‐dione in refluxing ethanol afforded 4‐amino‐2‐ (3,5‐dimethyl‐1H‐pyrazol‐1‐yl)‐6‐(4‐methoxyphenyl)pyrimi‐ dine‐5‐carbonitrile (3) [6]. Acetylation of compound 2 using freshly distilled acetic anhydride yielded the acetylated product (4). The mass spectrum of this product indicates the incorporation of three acetyl groups which also confirmed from its 1H NMR spectrum. On the other hand, treatment of 2 with furoyl chloride afforded the monoacylated product (5). However, the reaction of 2 with phthalic anhydride in refluxing acetic acid gave the phthalimide derivative (6). Furthermore, compound 2 when treated with ethyl chloroformate yielded ethyl N‐pyrimidin‐2‐yl carbazate derivative (7) (Scheme 2). The structures 4‐7 were substantiated from the correct analytical and spectroscopic data (c.f. Exp.). The formation of compounds 4‐7 could be explained on the basis of nucleophilic substitution at trigonal carbon (tetrahedral mechanism). It has been reported that heterocyclic o‐aminocarbonitriles including furans, pyrimidines and quinazolines [28] reacted with carbon disulphide under different conditions to afford biologically interest fused thiazines and pyrimidinedithione. However, compound 2 was treated with carbon disulphide in ethanolic potassium hydroxide to yield 7‐amino‐5‐(4‐ methoxyphenyl)‐3‐thioxo‐2,3‐dihydro‐[1,2,4]‐triazolo[4,3‐a] pyrimidine‐6‐carbonitrile (8) (Scheme 5). This reaction could be visualized as shown in (Scheme 3). 7‐Amino‐3‐(3,4‐dimethoxyphenyl)‐5‐(4‐methoxyphenyl)‐ [1,2,4]triazolo[4,3‐a]pyrimidine‐6‐carbonitrile (9) was obtained in fairly good yield upon treatment of compound 2 with 2‐(3,4‐dimethoxybenzylidene)malononitrile in boiling ethanol in the presence of few drops of acetic acid (Scheme 5). The structure of 9 was deduced from the correct analytical and spectroscopic data (c.f. Exp.). Formation of compound 9 could be postulated as shown in (Scheme 4). Refluxing the hydrazino derivative 2 with p‐nitro benzaldehyde in ethanol for 10 min afforded a crude yellow solid with molecular formula C19H15N7O3 [M.+= 389 (6.5%)] which detected as (E)‐2‐(2‐(4‐nitrobenzylidene)hydrazinyl)‐4‐ amino‐6‐(4‐methoxyphenyl)pyrimidine‐5‐carbonitrile (10) (Scheme 5). In the context, it was claimed that the reaction of the hydrazino derivative with phenyl isothiocyanate in refluxing pyridine resulted in the formation of 1,2,4‐triazolo‐ pyrimidinthione or thiourea derivatives [27]. Herein, when compound 2 was refluxed with the same reagent in boiling pyridine afforded the sulfur free product with molecular formula C19H15N7O [M.+= 357] which detected as 7‐amino‐5‐(4‐ methoxyphenyl)‐3‐(phenylamino)‐[1,2,4]triazolo[4,3‐a]pyrimi‐ dine‐6‐carbonitrile (11) (Scheme 5). Treatment of 2 with diethyl oxalate in refluxing n‐butanol in the presence of acetic acid afforded the mono acetylated product (12) which indicates that no combination occurred between compound 2 and the oxalate in the presence of acetic acid. This confirmed by refluxing 2 with acetic acid in n‐butanol which yielded the same product 12 (Scheme 5). As a continuation [29‐31] of our study on the reactivity of activated nitriles, the (E)‐2‐cyano‐3‐(4‐nitrophenyl)acrylamide (13) was prepared and allowed to react with carbon and nitrogen nucleophiles. Thus, the reaction of 13 with 6‐amino‐2‐ thioxo‐2,3‐dihydropyrimidin‐4(1H)‐one in boiling ethanol in the presence of piperidine yielded a yellow solid product separated on hot and identified as the pyrimidine derivative 14 (13%). Acidification of the alkaline filtrate left a solid product which detected as the pyrido[2,3‐d]pyrimidine derivative 15 (56.6%) (Scheme 7). 354 Mahmoud et al. / European Journal of Chemistry 2 (3) (2011) 347‐351 CN NH2ONH NC + Ar Ar NC NH2 O NH NH2 a b NO NC Ar NH2 NH2 NH NO NC Ar NH2 NH2 NH2 NO NC Ar NH2 NH2 NH2 O Michael adduct N (a) 1,6 -ex o-d ig Cy cli zat ion 1,7-exo-dig Cyclization (b) O O 13 -H213 18 (46.6%) -H2 19 (15.7%) O O N N NC Ar O NH O NH2 H H N N NC Ar O NH2 O NH2 H H NH2 B Scheme 8 The reaction was assumed to proceed via Michael addition of the C‐5 of pyrimidine nucleus to the α,β‐unsaturated nitrile 13 and subsequent 1,6‐exo‐trig cyclization through nucleophilic addition of the amino group to the carboxamido carbonyl group (Scheme 6). Furthermore, treatment of 13 with 2‐(4‐oxo‐4,5‐ dihydrothiazol‐2‐yl) acetonitrile (16) in boiling ethanol in the presence of catalytic amount of piperidine afforded (E)‐2‐(5‐(4‐ nitrobenzylidene)‐4‐oxo‐4,5‐dihydrothiazol‐2‐yl)acetonitrile (17) as the sole product (62.8%) (Scheme 7). The structure 17 was chemically supported by identity with an authentic sample resulted from the condensation of 16 with p‐nitrobenzaldehyde (Scheme 7). N‐Amino‐2‐pyridones have proved to be useful synthetic intermediates [32‐35]. However, there are few synthetic procedures for the preparation of N‐amino‐2‐pyridones. These compounds are usually obtained [36‐39] in low yields by reaction of hydrazine with 2‐pyrones, which are in turn prepared in low yields from open chain compounds [35‐44]. We report in this article one step synthesis of N‐amino‐2‐ pyridone (18) from compound 13 with 2‐cyanoacetohydrazide. The reaction easily performed in ethanol at room temperature in the presence of piperidine by stirring for two hours. The separated solid was identified using analytical and spectral data as 1,2‐diamino‐5‐cyano‐4‐(4‐nitrophenyl)‐6‐oxo‐1,6‐ dihydropyridine‐3‐carboxamide (18). Acidification of the mother liquor left another yellow solid which have the same molecular formula of compound 18. This product was expected to have the diazepinone structure 19 (Scheme 7). The reaction may be assumed to proceed via Michael addition of 2‐cyanoacetohydrazide to 13 and the resulting adduct undergoes in situ cyclization by nucleophilic attack at the cyano group to give the six membered ring which on aromatization gives rise to the N‐amino‐2‐pyridone (18) (route a). A cyclization to seven‐membered diazepine ring must be favored by the higher nucleophilic character of the amino group with respect to the CONH group, but the poor yield of 19, probably due to the lack of aromatic character of the diazepinone ring 19 (Scheme 8). Beside the analytical and spectral data the structure 18 was got a further chemical support by the reaction with carbon disulphide. However, when compound 18 was treated with carbon disulphide in ethanolic potassium hydroxide at refluxing temperature yielded 1,2,4‐triazolo[1,5‐a]pyridine derivative 20 (Scheme7). 3.2. Biological activity test results The results were expressed as the 50% effective concentration (EC50). The 50% effective antiviral concentration (EC50) was defined as the compound concentration required for protecting 50% of the virus‐infected cells against viral cytopathogenicity. The therapeutic index was calculated by dividing LD50 on EC50 (Figure 1). Therapeutic index was calculated to all examined compounds and compared with Zanamivir as control anti‐ influenza drug as shown in Table 1. Table 1. Therapeutic index of the tested compounds comparing with zanamivir. Compound Therapeutic index 1 0.896257387 2 0.449688858 3 0.444114591 4 0.437320824 5 0.358697928 6 0.521603236 7 0.677685950 8 0.465886618 9 0.533377287 10 0.749826429 11 0.598077678 12 0.440400844 Zanamivir 15.4 Mahmoud et al. / European Journal of Chemistry 2 (3) (2011) 347‐351 355 Figure 1. The 50% effective concentration (EC50) and the concentration, which exhibited 50% cytotoxicity (LD50) of the tested compounds. The results were compared with the anti‐influenza drug, zanamivir. Compounds 1 and 10 showed the highest therapeutic index than the other compounds. 4. 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