id	sid	tid	token	lemma	pos
finefocus-533	1	1	41applied	41applied	NUM
finefocus-533	1	2	&	&	CCONJ
finefocus-533	1	3	environmental	environmental	ADJ
finefocus-533	1	4	microbiology	microbiology	NOUN
finefocus-533	1	5	•	•	NUM
finefocus-533	1	6	bioinformatics	bioinformatics	NOUN
finefocus-533	1	7	analysis	analysis	NOUN
finefocus-533	1	8	of	of	ADP
finefocus-533	1	9	microbial	microbial	ADJ
finefocus-533	1	10	abundance	abundance	NOUN
finefocus-533	1	11	and	and	CCONJ
finefocus-533	1	12	diversity	diversity	NOUN
finefocus-533	1	13	in	in	ADP
finefocus-533	1	14	acid	acid	NOUN
finefocus-533	1	15	mine	mine	NOUN
finefocus-533	1	16	drainage	drainage	NOUN
finefocus-533	1	17	from	from	ADP
finefocus-533	1	18	the	the	DET
finefocus-533	1	19	solomon	solomon	PROPN
finefocus-533	1	20	mine	mine	PROPN
finefocus-533	1	21	near	near	ADP
finefocus-533	1	22	creede	creede	PROPN
finefocus-533	1	23	,	,	PUNCT
finefocus-533	1	24	colorado	colorado	PROPN
finefocus-533	1	25	manuscript	manuscript	NOUN
finefocus-533	1	26	received	receive	VERB
finefocus-533	1	27	6	6	NUM
finefocus-533	1	28	august	august	PROPN
finefocus-533	1	29	2017	2017	NUM
finefocus-533	1	30	;	;	PUNCT
finefocus-533	1	31	accepted	accept	VERB
finefocus-533	1	32	1	1	NUM
finefocus-533	1	33	december	december	PROPN
finefocus-533	1	34	2017	2017	NUM
finefocus-533	1	35	ryan	ryan	PROPN
finefocus-533	1	36	k.	k.	PROPN
finefocus-533	1	37	miller1	miller1	PROPN
finefocus-533	1	38	,	,	PUNCT
finefocus-533	1	39	robert	robert	PROPN
finefocus-533	1	40	m.	m.	PROPN
finefocus-533	1	41	kirkham2	kirkham2	PROPN
finefocus-533	1	42	,	,	PUNCT
finefocus-533	1	43	and	and	CCONJ
finefocus-533	1	44	adam	adam	PROPN
finefocus-533	1	45	j.	j.	PROPN
finefocus-533	1	46	kleinschmit1	kleinschmit1	PROPN
finefocus-533	1	47	*	*	PROPN
finefocus-533	1	48	1department	1department	NUM
finefocus-533	1	49	of	of	ADP
finefocus-533	1	50	biology	biology	NOUN
finefocus-533	1	51	and	and	CCONJ
finefocus-533	1	52	earth	earth	NOUN
finefocus-533	1	53	sciences	science	NOUN
finefocus-533	1	54	,	,	PUNCT
finefocus-533	1	55	adams	adams	PROPN
finefocus-533	1	56	state	state	PROPN
finefocus-533	1	57	university	university	PROPN
finefocus-533	1	58	,	,	PUNCT
finefocus-533	1	59	alamosa	alamosa	PROPN
finefocus-533	1	60	,	,	PUNCT
finefocus-533	1	61	colorado	colorado	PROPN
finefocus-533	1	62	2geological	2geological	NUM
finefocus-533	1	63	solutions	solution	NOUN
finefocus-533	1	64	,	,	PUNCT
finefocus-533	1	65	alamosa	alamosa	PROPN
finefocus-533	1	66	,	,	PUNCT
finefocus-533	1	67	colorado	colorado	NOUN
finefocus-533	1	68	copyright	copyright	NOUN
finefocus-533	1	69	2018	2018	NUM
finefocus-533	1	70	,	,	PUNCT
finefocus-533	1	71	fine	fine	ADJ
finefocus-533	1	72	focus	focus	NOUN
finefocus-533	1	73	.	.	PUNCT
finefocus-533	2	1	all	all	DET
finefocus-533	2	2	rights	right	NOUN
finefocus-533	2	3	reserved	reserve	VERB
finefocus-533	2	4	.	.	PUNCT
finefocus-533	3	1	42•	42•	NUM
finefocus-533	3	2	fine	fine	ADJ
finefocus-533	3	3	focus	focus	NOUN
finefocus-533	3	4	,	,	PUNCT
finefocus-533	3	5	vol	vol	NOUN
finefocus-533	3	6	.	.	PUNCT
finefocus-533	3	7	4(1	4(1	NOUN
finefocus-533	3	8	)	)	PUNCT
finefocus-533	4	1	this	this	DET
finefocus-533	4	2	study	study	NOUN
finefocus-533	4	3	focused	focus	VERB
finefocus-533	4	4	on	on	ADP
finefocus-533	4	5	characterizing	characterize	VERB
finefocus-533	4	6	the	the	DET
finefocus-533	4	7	phylotypic	phylotypic	ADJ
finefocus-533	4	8	composition	composition	NOUN
finefocus-533	4	9	of	of	ADP
finefocus-533	4	10	acid	acid	NOUN
finefocus-533	4	11	mine	mine	NOUN
finefocus-533	4	12	drainage	drainage	NOUN
finefocus-533	4	13	(	(	PUNCT
finefocus-533	4	14	amd	amd	NOUN
finefocus-533	4	15	)	)	PUNCT
finefocus-533	4	16	communities	community	NOUN
finefocus-533	4	17	associated	associate	VERB
finefocus-533	4	18	with	with	ADP
finefocus-533	4	19	the	the	DET
finefocus-533	4	20	solomon	solomon	PROPN
finefocus-533	4	21	mine	mine	PROPN
finefocus-533	4	22	near	near	ADP
finefocus-533	4	23	creede	creede	PROPN
finefocus-533	4	24	,	,	PUNCT
finefocus-533	4	25	colorado	colorado	PROPN
finefocus-533	4	26	,	,	PUNCT
finefocus-533	4	27	and	and	CCONJ
finefocus-533	4	28	its	its	PRON
finefocus-533	4	29	relative	relative	ADJ
finefocus-533	4	30	diversity	diversity	NOUN
finefocus-533	4	31	compared	compare	VERB
finefocus-533	4	32	to	to	ADP
finefocus-533	4	33	microbial	microbial	ADJ
finefocus-533	4	34	communities	community	NOUN
finefocus-533	4	35	found	find	VERB
finefocus-533	4	36	in	in	ADP
finefocus-533	4	37	the	the	DET
finefocus-533	4	38	east	east	PROPN
finefocus-533	4	39	willow	willow	PROPN
finefocus-533	4	40	creek	creek	PROPN
finefocus-533	4	41	(	(	PUNCT
finefocus-533	4	42	ewc	ewc	PROPN
finefocus-533	4	43	)	)	PUNCT
finefocus-533	4	44	watershed	watershed	PROPN
finefocus-533	4	45	.	.	PUNCT
finefocus-533	5	1	amd	amd	PROPN
finefocus-533	5	2	from	from	ADP
finefocus-533	5	3	the	the	DET
finefocus-533	5	4	solomon	solomon	PROPN
finefocus-533	5	5	mine	mine	PROPN
finefocus-533	5	6	adit	adit	NOUN
finefocus-533	5	7	flows	flow	NOUN
finefocus-533	5	8	into	into	ADP
finefocus-533	5	9	an	an	DET
finefocus-533	5	10	existing	exist	VERB
finefocus-533	5	11	passive	passive	ADJ
finefocus-533	5	12	bioremediation	bioremediation	NOUN
finefocus-533	5	13	wetland	wetland	NOUN
finefocus-533	5	14	system	system	NOUN
finefocus-533	5	15	located	locate	VERB
finefocus-533	5	16	next	next	ADV
finefocus-533	5	17	to	to	ADP
finefocus-533	5	18	the	the	DET
finefocus-533	5	19	solomon	solomon	PROPN
finefocus-533	5	20	mine	mine	PROPN
finefocus-533	5	21	adit	adit	NOUN
finefocus-533	5	22	that	that	PRON
finefocus-533	5	23	currently	currently	ADV
finefocus-533	5	24	is	be	AUX
finefocus-533	5	25	ineffective	ineffective	ADJ
finefocus-533	5	26	and	and	CCONJ
finefocus-533	5	27	is	be	AUX
finefocus-533	5	28	under	under	ADP
finefocus-533	5	29	consideration	consideration	NOUN
finefocus-533	5	30	for	for	ADP
finefocus-533	5	31	renovation	renovation	NOUN
finefocus-533	5	32	.	.	PUNCT
finefocus-533	6	1	we	we	PRON
finefocus-533	6	2	are	be	AUX
finefocus-533	6	3	interested	interested	ADJ
finefocus-533	6	4	in	in	ADP
finefocus-533	6	5	gaining	gain	VERB
finefocus-533	6	6	an	an	DET
finefocus-533	6	7	understanding	understanding	NOUN
finefocus-533	6	8	of	of	ADP
finefocus-533	6	9	the	the	DET
finefocus-533	6	10	baseline	baseline	ADJ
finefocus-533	6	11	microbial	microbial	ADJ
finefocus-533	6	12	communities	community	NOUN
finefocus-533	6	13	present	present	ADJ
finefocus-533	6	14	in	in	ADP
finefocus-533	6	15	amd	amd	PROPN
finefocus-533	6	16	/	/	SYM
finefocus-533	6	17	ewc	ewc	PROPN
finefocus-533	6	18	and	and	CCONJ
finefocus-533	6	19	to	to	PART
finefocus-533	6	20	monitor	monitor	VERB
finefocus-533	6	21	them	they	PRON
finefocus-533	6	22	during	during	ADP
finefocus-533	6	23	future	future	ADJ
finefocus-533	6	24	wetland	wetland	NOUN
finefocus-533	6	25	renovation	renovation	NOUN
finefocus-533	6	26	.	.	PUNCT
finefocus-533	7	1	prokaryotic	prokaryotic	ADJ
finefocus-533	7	2	community	community	NOUN
finefocus-533	7	3	profiling	profiling	NOUN
finefocus-533	7	4	was	be	AUX
finefocus-533	7	5	approached	approach	VERB
finefocus-533	7	6	using	use	VERB
finefocus-533	7	7	ssu	ssu	PROPN
finefocus-533	7	8	16s	16s	PROPN
finefocus-533	7	9	rrna	rrna	PROPN
finefocus-533	7	10	marker	marker	NOUN
finefocus-533	7	11	gene	gene	NOUN
finefocus-533	7	12	amplification	amplification	NOUN
finefocus-533	7	13	coupled	couple	VERB
finefocus-533	7	14	with	with	ADP
finefocus-533	7	15	next	next	ADJ
finefocus-533	7	16	generation	generation	NOUN
finefocus-533	7	17	sequencing	sequence	VERB
finefocus-533	7	18	.	.	PUNCT
finefocus-533	8	1	bioinformatics	bioinformatics	NOUN
finefocus-533	8	2	analysis	analysis	NOUN
finefocus-533	8	3	included	include	VERB
finefocus-533	8	4	raw	raw	ADJ
finefocus-533	8	5	read	read	NOUN
finefocus-533	8	6	preprocessing	preprocessing	NOUN
finefocus-533	8	7	,	,	PUNCT
finefocus-533	8	8	data	datum	NOUN
finefocus-533	8	9	visualization	visualization	NOUN
finefocus-533	8	10	,	,	PUNCT
finefocus-533	8	11	and	and	CCONJ
finefocus-533	8	12	statistical	statistical	ADJ
finefocus-533	8	13	testing	testing	NOUN
finefocus-533	8	14	using	use	VERB
finefocus-533	8	15	a	a	DET
finefocus-533	8	16	combination	combination	NOUN
finefocus-533	8	17	of	of	ADP
finefocus-533	8	18	usearch	usearch	NOUN
finefocus-533	8	19	and	and	CCONJ
finefocus-533	8	20	qiimebased	qiimebased	ADJ
finefocus-533	8	21	scripts	script	NOUN
finefocus-533	8	22	.	.	PUNCT
finefocus-533	9	1	a	a	DET
finefocus-533	9	2	ph	ph	ADJ
finefocus-533	9	3	and	and	CCONJ
finefocus-533	9	4	conductivity	conductivity	NOUN
finefocus-533	9	5	gradient	gradient	NOUN
finefocus-533	9	6	were	be	AUX
finefocus-533	9	7	observed	observe	VERB
finefocus-533	9	8	for	for	ADP
finefocus-533	9	9	water	water	NOUN
finefocus-533	9	10	moving	move	VERB
finefocus-533	9	11	through	through	ADP
finefocus-533	9	12	the	the	DET
finefocus-533	9	13	currently	currently	ADV
finefocus-533	9	14	inefficient	inefficient	ADJ
finefocus-533	9	15	wetland	wetland	NOUN
finefocus-533	9	16	system	system	NOUN
finefocus-533	9	17	at	at	ADP
finefocus-533	9	18	the	the	DET
finefocus-533	9	19	solomon	solomon	PROPN
finefocus-533	9	20	mine	mine	PROPN
finefocus-533	9	21	.	.	PUNCT
finefocus-533	10	1	the	the	DET
finefocus-533	10	2	ewc	ewc	PROPN
finefocus-533	10	3	microbiomes	microbiomes	PROPN
finefocus-533	10	4	had	have	VERB
finefocus-533	10	5	statistically	statistically	ADV
finefocus-533	10	6	significant	significant	ADJ
finefocus-533	10	7	higher	high	ADJ
finefocus-533	10	8	alpha	alpha	NOUN
finefocus-533	10	9	diversity	diversity	NOUN
finefocus-533	10	10	compared	compare	VERB
finefocus-533	10	11	to	to	ADP
finefocus-533	10	12	the	the	DET
finefocus-533	10	13	amd	amd	PROPN
finefocus-533	10	14	microbiomes	microbiomes	PROPN
finefocus-533	10	15	.	.	PUNCT
finefocus-533	11	1	beta	beta	ADJ
finefocus-533	11	2	diversity	diversity	NOUN
finefocus-533	11	3	analysis	analysis	NOUN
finefocus-533	11	4	parsed	parse	VERB
finefocus-533	11	5	the	the	DET
finefocus-533	11	6	sample	sample	NOUN
finefocus-533	11	7	locations	location	NOUN
finefocus-533	11	8	into	into	ADP
finefocus-533	11	9	statistically	statistically	ADV
finefocus-533	11	10	significant	significant	ADJ
finefocus-533	11	11	groups	group	NOUN
finefocus-533	11	12	including	include	VERB
finefocus-533	11	13	core	core	PROPN
finefocus-533	11	14	amd	amd	PROPN
finefocus-533	11	15	microbiomes	microbiomes	PROPN
finefocus-533	11	16	,	,	PUNCT
finefocus-533	11	17	the	the	DET
finefocus-533	11	18	wetland	wetland	NOUN
finefocus-533	11	19	cell	cell	NOUN
finefocus-533	11	20	3	3	NUM
finefocus-533	11	21	microbiome	microbiome	NOUN
finefocus-533	11	22	,	,	PUNCT
finefocus-533	11	23	and	and	CCONJ
finefocus-533	11	24	ewc	ewc	PROPN
finefocus-533	11	25	microbiomes	microbiomes	PROPN
finefocus-533	11	26	using	use	VERB
finefocus-533	11	27	multidimensional	multidimensional	ADJ
finefocus-533	11	28	scaling	scaling	NOUN
finefocus-533	11	29	.	.	PUNCT
finefocus-533	12	1	taxa	taxa	NOUN
finefocus-533	12	2	driving	drive	VERB
finefocus-533	12	3	beta	beta	NOUN
finefocus-533	12	4	diversity	diversity	NOUN
finefocus-533	12	5	included	include	VERB
finefocus-533	12	6	the	the	DET
finefocus-533	12	7	phylum	phylum	NOUN
finefocus-533	12	8	proteobacteria	proteobacteria	NOUN
finefocus-533	12	9	for	for	ADP
finefocus-533	12	10	the	the	DET
finefocus-533	12	11	core	core	NOUN
finefocus-533	12	12	amd	amd	PROPN
finefocus-533	12	13	microbiomes	microbiomes	PROPN
finefocus-533	12	14	,	,	PUNCT
finefocus-533	12	15	the	the	DET
finefocus-533	12	16	phyla	phyla	NOUN
finefocus-533	12	17	firmicutes	firmicute	VERB
finefocus-533	12	18	and	and	CCONJ
finefocus-533	12	19	chloroflexi	chloroflexi	NOUN
finefocus-533	12	20	for	for	ADP
finefocus-533	12	21	the	the	DET
finefocus-533	12	22	constructed	construct	VERB
finefocus-533	12	23	wetland	wetland	NOUN
finefocus-533	12	24	cell	cell	NOUN
finefocus-533	12	25	3	3	NUM
finefocus-533	12	26	,	,	PUNCT
finefocus-533	12	27	and	and	CCONJ
finefocus-533	12	28	the	the	DET
finefocus-533	12	29	phyla	phyla	NOUN
finefocus-533	12	30	bacteroidetes	bacteroidete	NOUN
finefocus-533	12	31	and	and	CCONJ
finefocus-533	12	32	verrucomicrobia	verrucomicrobia	NOUN
finefocus-533	12	33	for	for	ADP
finefocus-533	12	34	ewc	ewc	PROPN
finefocus-533	12	35	.	.	PUNCT
finefocus-533	13	1	our	our	PRON
finefocus-533	13	2	data	datum	NOUN
finefocus-533	13	3	suggests	suggest	VERB
finefocus-533	13	4	that	that	SCONJ
finefocus-533	13	5	the	the	DET
finefocus-533	13	6	microbial	microbial	ADJ
finefocus-533	13	7	community	community	NOUN
finefocus-533	13	8	in	in	ADP
finefocus-533	13	9	constructed	construct	VERB
finefocus-533	13	10	wetland	wetland	NOUN
finefocus-533	13	11	cell	cell	NOUN
finefocus-533	13	12	3	3	NUM
finefocus-533	13	13	is	be	AUX
finefocus-533	13	14	likely	likely	ADJ
finefocus-533	13	15	where	where	SCONJ
finefocus-533	13	16	limited	limited	ADJ
finefocus-533	13	17	sulfate	sulfate	NOUN
finefocus-533	13	18	reduction	reduction	NOUN
finefocus-533	13	19	activity	activity	NOUN
finefocus-533	13	20	is	be	AUX
finefocus-533	13	21	operating	operate	VERB
finefocus-533	13	22	at	at	ADP
finefocus-533	13	23	low	low	ADJ
finefocus-533	13	24	capacity	capacity	NOUN
finefocus-533	13	25	,	,	PUNCT
finefocus-533	13	26	which	which	PRON
finefocus-533	13	27	will	will	AUX
finefocus-533	13	28	be	be	AUX
finefocus-533	13	29	further	far	ADV
finefocus-533	13	30	investigated	investigate	VERB
finefocus-533	13	31	via	via	ADP
finefocus-533	13	32	shotgun	shotgun	NOUN
finefocus-533	13	33	metagenomic	metagenomic	ADJ
finefocus-533	13	34	analysis	analysis	NOUN
finefocus-533	13	35	.	.	PUNCT
finefocus-533	14	1	abstract	abstract	ADJ
finefocus-533	14	2	keywords	keyword	NOUN
finefocus-533	14	3	•	•	ADV
finefocus-533	14	4	acid	acid	NOUN
finefocus-533	14	5	mine	mine	NOUN
finefocus-533	14	6	drainage	drainage	NOUN
finefocus-533	14	7	•	•	DET
finefocus-533	14	8	microbial	microbial	ADJ
finefocus-533	14	9	ecology	ecology	NOUN
finefocus-533	14	10	•	•	ADP
finefocus-533	14	11	16s	16s	PROPN
finefocus-533	14	12	rrna	rrna	PROPN
finefocus-533	14	13	marker	marker	NOUN
finefocus-533	14	14	gene	gene	NOUN
finefocus-533	14	15	survey	survey	NOUN
finefocus-533	14	16	•	•	NOUN
finefocus-533	14	17	high	high	ADJ
finefocus-533	14	18	throughput	throughput	NOUN
finefocus-533	14	19	sequencing	sequence	VERB
finefocus-533	14	20	•	•	NUM
finefocus-533	14	21	environmental	environmental	ADJ
finefocus-533	14	22	microbiota	microbiota	NOUN
finefocus-533	14	23	corresponding	correspond	VERB
finefocus-533	14	24	author	author	NOUN
finefocus-533	14	25	*	*	PUNCT
finefocus-533	14	26	adam	adam	PROPN
finefocus-533	14	27	j.	j.	PROPN
finefocus-533	14	28	kleinschmit	kleinschmit	PROPN
finefocus-533	14	29	,	,	PUNCT
finefocus-533	14	30	adams	adams	PROPN
finefocus-533	14	31	state	state	PROPN
finefocus-533	14	32	university	university	PROPN
finefocus-533	14	33	,	,	PUNCT
finefocus-533	14	34	alamosa	alamosa	PROPN
finefocus-533	14	35	,	,	PUNCT
finefocus-533	14	36	co	co	NOUN
finefocus-533	14	37	usa	usa	PROPN
finefocus-533	14	38	akleinschmit@adams.edu	akleinschmit@adams.edu	PROPN
finefocus-533	15	1	43applied	43applied	PROPN
finefocus-533	15	2	&	&	CCONJ
finefocus-533	15	3	environmental	environmental	ADJ
finefocus-533	15	4	microbiology	microbiology	NOUN
finefocus-533	15	5	•	•	NOUN
finefocus-533	15	6	introduction	introduction	NOUN
finefocus-533	15	7	microbes	microbe	NOUN
finefocus-533	15	8	populate	populate	VERB
finefocus-533	15	9	every	every	DET
finefocus-533	15	10	known	know	VERB
finefocus-533	15	11	niche	niche	NOUN
finefocus-533	15	12	on	on	ADP
finefocus-533	15	13	earth	earth	NOUN
finefocus-533	15	14	including	include	VERB
finefocus-533	15	15	physiologically	physiologically	ADV
finefocus-533	15	16	challenging	challenging	ADJ
finefocus-533	15	17	environments	environment	NOUN
finefocus-533	15	18	for	for	ADP
finefocus-533	15	19	biological	biological	ADJ
finefocus-533	15	20	organisms	organism	NOUN
finefocus-533	15	21	,	,	PUNCT
finefocus-533	15	22	such	such	ADJ
finefocus-533	15	23	as	as	ADP
finefocus-533	15	24	deep	deep	ADJ
finefocus-533	15	25	-	-	PUNCT
finefocus-533	15	26	sea	sea	NOUN
finefocus-533	15	27	hydrothermal	hydrothermal	NOUN
finefocus-533	15	28	vents	vent	NOUN
finefocus-533	15	29	and	and	CCONJ
finefocus-533	15	30	subglacial	subglacial	ADJ
finefocus-533	15	31	antarctic	antarctic	ADJ
finefocus-533	15	32	lakes	lake	NOUN
finefocus-533	15	33	,	,	PUNCT
finefocus-533	15	34	where	where	SCONJ
finefocus-533	15	35	extremophiles	extremophile	NOUN
finefocus-533	15	36	thrive	thrive	VERB
finefocus-533	15	37	(	(	PUNCT
finefocus-533	15	38	38	38	NUM
finefocus-533	15	39	,	,	PUNCT
finefocus-533	15	40	41	41	NUM
finefocus-533	15	41	)	)	PUNCT
finefocus-533	15	42	.	.	PUNCT
finefocus-533	16	1	environmentally	environmentally	ADV
finefocus-533	16	2	,	,	PUNCT
finefocus-533	16	3	microbes	microbe	NOUN
finefocus-533	16	4	are	be	AUX
finefocus-533	16	5	essential	essential	ADJ
finefocus-533	16	6	in	in	ADP
finefocus-533	16	7	the	the	DET
finefocus-533	16	8	ecological	ecological	ADJ
finefocus-533	16	9	biogeochemical	biogeochemical	ADJ
finefocus-533	16	10	cycling	cycling	NOUN
finefocus-533	16	11	of	of	ADP
finefocus-533	16	12	elements	element	NOUN
finefocus-533	16	13	(	(	PUNCT
finefocus-533	16	14	e.g.	e.g.	ADV
finefocus-533	16	15	,	,	PUNCT
finefocus-533	16	16	carbon	carbon	NOUN
finefocus-533	16	17	,	,	PUNCT
finefocus-533	16	18	nitrogen	nitrogen	NOUN
finefocus-533	16	19	,	,	PUNCT
finefocus-533	16	20	sulfur	sulfur	NOUN
finefocus-533	16	21	,	,	PUNCT
finefocus-533	16	22	phosphorus	phosphorus	NOUN
finefocus-533	16	23	)	)	PUNCT
finefocus-533	16	24	to	to	PART
finefocus-533	16	25	allow	allow	VERB
finefocus-533	16	26	other	other	ADJ
finefocus-533	16	27	biological	biological	ADJ
finefocus-533	16	28	organisms	organism	NOUN
finefocus-533	16	29	access	access	NOUN
finefocus-533	16	30	to	to	ADP
finefocus-533	16	31	tangible	tangible	ADJ
finefocus-533	16	32	forms	form	NOUN
finefocus-533	16	33	of	of	ADP
finefocus-533	16	34	these	these	DET
finefocus-533	16	35	elements	element	NOUN
finefocus-533	16	36	,	,	PUNCT
finefocus-533	16	37	thus	thus	ADV
finefocus-533	16	38	making	make	VERB
finefocus-533	16	39	life	life	NOUN
finefocus-533	16	40	sustainable	sustainable	ADJ
finefocus-533	16	41	(	(	PUNCT
finefocus-533	16	42	18	18	NUM
finefocus-533	16	43	)	)	PUNCT
finefocus-533	16	44	.	.	PUNCT
finefocus-533	17	1	the	the	DET
finefocus-533	17	2	shear	shear	NOUN
finefocus-533	17	3	abundance	abundance	NOUN
finefocus-533	17	4	of	of	ADP
finefocus-533	17	5	microbes	microbe	NOUN
finefocus-533	17	6	makes	make	VERB
finefocus-533	17	7	them	they	PRON
finefocus-533	17	8	a	a	DET
finefocus-533	17	9	major	major	ADJ
finefocus-533	17	10	force	force	NOUN
finefocus-533	17	11	that	that	PRON
finefocus-533	17	12	keeps	keep	VERB
finefocus-533	17	13	elements	element	NOUN
finefocus-533	17	14	circulating	circulate	VERB
finefocus-533	17	15	between	between	ADP
finefocus-533	17	16	biotic	biotic	ADJ
finefocus-533	17	17	and	and	CCONJ
finefocus-533	17	18	abiotic	abiotic	ADJ
finefocus-533	17	19	entities	entity	NOUN
finefocus-533	17	20	in	in	ADP
finefocus-533	17	21	an	an	DET
finefocus-533	17	22	ecosystem	ecosystem	NOUN
finefocus-533	17	23	.	.	PUNCT
finefocus-533	18	1	for	for	ADP
finefocus-533	18	2	example	example	NOUN
finefocus-533	18	3	,	,	PUNCT
finefocus-533	18	4	chemolithotrophs	chemolithotroph	NOUN
finefocus-533	18	5	can	can	AUX
finefocus-533	18	6	“	"	PUNCT
finefocus-533	18	7	eat	eat	VERB
finefocus-533	18	8	rocks	rock	NOUN
finefocus-533	18	9	”	"	PUNCT
finefocus-533	18	10	to	to	PART
finefocus-533	18	11	obtain	obtain	VERB
finefocus-533	18	12	energy	energy	NOUN
finefocus-533	18	13	and	and	CCONJ
finefocus-533	18	14	electrons	electron	NOUN
finefocus-533	18	15	,	,	PUNCT
finefocus-533	18	16	while	while	SCONJ
finefocus-533	18	17	utilizing	utilize	VERB
finefocus-533	18	18	carbon	carbon	NOUN
finefocus-533	18	19	dioxide	dioxide	NOUN
finefocus-533	18	20	as	as	ADP
finefocus-533	18	21	a	a	DET
finefocus-533	18	22	carbon	carbon	NOUN
finefocus-533	18	23	source	source	NOUN
finefocus-533	18	24	.	.	PUNCT
finefocus-533	19	1	thus	thus	ADV
finefocus-533	19	2	,	,	PUNCT
finefocus-533	19	3	chemolithotrophs	chemolithotroph	NOUN
finefocus-533	19	4	do	do	AUX
finefocus-533	19	5	not	not	PART
finefocus-533	19	6	need	need	VERB
finefocus-533	19	7	light	light	NOUN
finefocus-533	19	8	or	or	CCONJ
finefocus-533	19	9	organic	organic	ADJ
finefocus-533	19	10	matter	matter	NOUN
finefocus-533	19	11	to	to	PART
finefocus-533	19	12	proliferate	proliferate	VERB
finefocus-533	19	13	and	and	CCONJ
finefocus-533	19	14	can	can	AUX
finefocus-533	19	15	live	live	VERB
finefocus-533	19	16	in	in	ADP
finefocus-533	19	17	extreme	extreme	ADJ
finefocus-533	19	18	habitats	habitat	NOUN
finefocus-533	19	19	such	such	ADJ
finefocus-533	19	20	as	as	ADP
finefocus-533	19	21	deep	deep	ADJ
finefocus-533	19	22	-	-	PUNCT
finefocus-533	19	23	sea	sea	NOUN
finefocus-533	19	24	hydrothermal	hydrothermal	NOUN
finefocus-533	19	25	vents	vent	NOUN
finefocus-533	19	26	and	and	CCONJ
finefocus-533	19	27	underground	underground	ADJ
finefocus-533	19	28	caves	cave	NOUN
finefocus-533	19	29	(	(	PUNCT
finefocus-533	19	30	33	33	NUM
finefocus-533	19	31	)	)	PUNCT
finefocus-533	19	32	.	.	PUNCT
finefocus-533	20	1	oxidation	oxidation	NOUN
finefocus-533	20	2	of	of	ADP
finefocus-533	20	3	inorganic	inorganic	ADJ
finefocus-533	20	4	matter	matter	NOUN
finefocus-533	20	5	by	by	ADP
finefocus-533	20	6	chemolithotrophs	chemolithotroph	NOUN
finefocus-533	20	7	associated	associate	VERB
finefocus-533	20	8	with	with	ADP
finefocus-533	20	9	volcanic	volcanic	ADJ
finefocus-533	20	10	caves	cave	NOUN
finefocus-533	20	11	or	or	CCONJ
finefocus-533	20	12	even	even	ADV
finefocus-533	20	13	exposed	expose	VERB
finefocus-533	20	14	rock	rock	NOUN
finefocus-533	20	15	that	that	PRON
finefocus-533	20	16	is	be	AUX
finefocus-533	20	17	highly	highly	ADV
finefocus-533	20	18	mineralized	mineralize	VERB
finefocus-533	20	19	with	with	ADP
finefocus-533	20	20	metal	metal	NOUN
finefocus-533	20	21	sulfides	sulfide	NOUN
finefocus-533	20	22	can	can	AUX
finefocus-533	20	23	be	be	AUX
finefocus-533	20	24	the	the	DET
finefocus-533	20	25	limiting	limit	VERB
finefocus-533	20	26	factor	factor	NOUN
finefocus-533	20	27	for	for	ADP
finefocus-533	20	28	the	the	DET
finefocus-533	20	29	generation	generation	NOUN
finefocus-533	20	30	of	of	ADP
finefocus-533	20	31	acid	acid	NOUN
finefocus-533	20	32	rock	rock	NOUN
finefocus-533	20	33	drainage	drainage	NOUN
finefocus-533	20	34	(	(	PUNCT
finefocus-533	20	35	ard	ard	NOUN
finefocus-533	20	36	)	)	PUNCT
finefocus-533	20	37	(	(	PUNCT
finefocus-533	20	38	39	39	NUM
finefocus-533	20	39	)	)	PUNCT
finefocus-533	20	40	.	.	PUNCT
finefocus-533	21	1	ard	ard	PROPN
finefocus-533	21	2	is	be	AUX
finefocus-533	21	3	a	a	DET
finefocus-533	21	4	result	result	NOUN
finefocus-533	21	5	of	of	ADP
finefocus-533	21	6	an	an	DET
finefocus-533	21	7	abiotic	abiotic	ADJ
finefocus-533	21	8	reaction	reaction	NOUN
finefocus-533	21	9	typically	typically	ADV
finefocus-533	21	10	involving	involve	VERB
finefocus-533	21	11	iron	iron	NOUN
finefocus-533	21	12	pyrite	pyrite	NOUN
finefocus-533	21	13	that	that	PRON
finefocus-533	21	14	can	can	AUX
finefocus-533	21	15	be	be	AUX
finefocus-533	21	16	accelerated	accelerate	VERB
finefocus-533	21	17	by	by	ADP
finefocus-533	21	18	microbes	microbe	NOUN
finefocus-533	21	19	and	and	CCONJ
finefocus-533	21	20	produces	produce	VERB
finefocus-533	21	21	sulfuric	sulfuric	ADJ
finefocus-533	21	22	acid	acid	NOUN
finefocus-533	21	23	as	as	ADP
finefocus-533	21	24	byproduct	byproduct	NOUN
finefocus-533	21	25	,	,	PUNCT
finefocus-533	21	26	thus	thus	ADV
finefocus-533	21	27	dramatically	dramatically	ADV
finefocus-533	21	28	lowering	lower	VERB
finefocus-533	21	29	the	the	DET
finefocus-533	21	30	ph	ph	NOUN
finefocus-533	21	31	within	within	ADP
finefocus-533	21	32	a	a	DET
finefocus-533	21	33	watershed	watershe	VERB
finefocus-533	21	34	downstream	downstream	NOUN
finefocus-533	21	35	of	of	ADP
finefocus-533	21	36	the	the	DET
finefocus-533	21	37	ard	ard	PROPN
finefocus-533	21	38	source	source	NOUN
finefocus-533	21	39	.	.	PUNCT
finefocus-533	22	1	under	under	ADP
finefocus-533	22	2	these	these	DET
finefocus-533	22	3	low	low	ADJ
finefocus-533	22	4	ph	ph	ADJ
finefocus-533	22	5	conditions	condition	NOUN
finefocus-533	22	6	,	,	PUNCT
finefocus-533	22	7	other	other	ADJ
finefocus-533	22	8	heavy	heavy	ADJ
finefocus-533	22	9	metals	metal	NOUN
finefocus-533	22	10	are	be	AUX
finefocus-533	22	11	easily	easily	ADV
finefocus-533	22	12	solubilized	solubilize	VERB
finefocus-533	22	13	from	from	ADP
finefocus-533	22	14	metallic	metallic	ADJ
finefocus-533	22	15	minerals	mineral	NOUN
finefocus-533	22	16	and	and	CCONJ
finefocus-533	22	17	can	can	AUX
finefocus-533	22	18	lead	lead	VERB
finefocus-533	22	19	to	to	ADP
finefocus-533	22	20	environmental	environmental	ADJ
finefocus-533	22	21	degradation	degradation	NOUN
finefocus-533	22	22	within	within	ADP
finefocus-533	22	23	the	the	DET
finefocus-533	22	24	watershed	watershed	NOUN
finefocus-533	22	25	(	(	PUNCT
finefocus-533	22	26	13	13	NUM
finefocus-533	22	27	)	)	PUNCT
finefocus-533	22	28	.	.	PUNCT
finefocus-533	23	1	ard	ard	PROPN
finefocus-533	23	2	generation	generation	NOUN
finefocus-533	23	3	can	can	AUX
finefocus-533	23	4	be	be	AUX
finefocus-533	23	5	expedited	expedite	VERB
finefocus-533	23	6	and/	and/	NOUN
finefocus-533	23	7	or	or	CCONJ
finefocus-533	23	8	be	be	AUX
finefocus-533	23	9	directly	directly	ADV
finefocus-533	23	10	generated	generate	VERB
finefocus-533	23	11	as	as	ADP
finefocus-533	23	12	a	a	DET
finefocus-533	23	13	result	result	NOUN
finefocus-533	23	14	of	of	ADP
finefocus-533	23	15	anthropogenic	anthropogenic	ADJ
finefocus-533	23	16	activity	activity	NOUN
finefocus-533	23	17	such	such	ADJ
finefocus-533	23	18	as	as	ADP
finefocus-533	23	19	civil	civil	ADJ
finefocus-533	23	20	engineering	engineering	NOUN
finefocus-533	23	21	projects	project	NOUN
finefocus-533	23	22	and	and	CCONJ
finefocus-533	23	23	mining	mining	NOUN
finefocus-533	23	24	.	.	PUNCT
finefocus-533	24	1	when	when	SCONJ
finefocus-533	24	2	ard	ard	PROPN
finefocus-533	24	3	is	be	AUX
finefocus-533	24	4	associated	associate	VERB
finefocus-533	24	5	with	with	ADP
finefocus-533	24	6	mining	mining	NOUN
finefocus-533	24	7	activity	activity	NOUN
finefocus-533	24	8	it	it	PRON
finefocus-533	24	9	is	be	AUX
finefocus-533	24	10	more	more	ADV
finefocus-533	24	11	commonly	commonly	ADV
finefocus-533	24	12	referred	refer	VERB
finefocus-533	24	13	to	to	ADP
finefocus-533	24	14	as	as	ADP
finefocus-533	24	15	acid	acid	NOUN
finefocus-533	24	16	mine	mine	NOUN
finefocus-533	24	17	drainage	drainage	NOUN
finefocus-533	24	18	(	(	PUNCT
finefocus-533	24	19	amd	amd	ADJ
finefocus-533	24	20	)	)	PUNCT
finefocus-533	24	21	.	.	PUNCT
finefocus-533	25	1	abandoned	abandon	VERB
finefocus-533	25	2	mine	mine	ADJ
finefocus-533	25	3	adits	adit	NOUN
finefocus-533	25	4	and	and	CCONJ
finefocus-533	25	5	associated	associated	ADJ
finefocus-533	25	6	tailing	tail	VERB
finefocus-533	25	7	piles	pile	NOUN
finefocus-533	25	8	can	can	AUX
finefocus-533	25	9	bring	bring	VERB
finefocus-533	25	10	sulfide	sulfide	NOUN
finefocus-533	25	11	-	-	PUNCT
finefocus-533	25	12	rich	rich	ADJ
finefocus-533	25	13	rock	rock	NOUN
finefocus-533	25	14	into	into	ADP
finefocus-533	25	15	contact	contact	NOUN
finefocus-533	25	16	with	with	ADP
finefocus-533	25	17	abiotic	abiotic	ADJ
finefocus-533	25	18	factors	factor	NOUN
finefocus-533	25	19	(	(	PUNCT
finefocus-533	25	20	e.g.	e.g.	ADV
finefocus-533	25	21	,	,	PUNCT
finefocus-533	25	22	oxygen	oxygen	NOUN
finefocus-533	25	23	and	and	CCONJ
finefocus-533	25	24	moisture	moisture	NOUN
finefocus-533	25	25	)	)	PUNCT
finefocus-533	25	26	along	along	ADP
finefocus-533	25	27	with	with	ADP
finefocus-533	25	28	biotic	biotic	ADJ
finefocus-533	25	29	factors	factor	NOUN
finefocus-533	25	30	(	(	PUNCT
finefocus-533	25	31	e.g.	e.g.	ADV
finefocus-533	25	32	,	,	PUNCT
finefocus-533	25	33	chemolithotrophs	chemolithotroph	NOUN
finefocus-533	25	34	)	)	PUNCT
finefocus-533	25	35	,	,	PUNCT
finefocus-533	25	36	which	which	PRON
finefocus-533	25	37	can	can	AUX
finefocus-533	25	38	in	in	ADP
finefocus-533	25	39	turn	turn	NOUN
finefocus-533	25	40	produce	produce	VERB
finefocus-533	25	41	amd	amd	NOUN
finefocus-533	25	42	for	for	ADP
finefocus-533	25	43	thousands	thousand	NOUN
finefocus-533	25	44	of	of	ADP
finefocus-533	25	45	years	year	NOUN
finefocus-533	25	46	.	.	PUNCT
finefocus-533	26	1	this	this	DET
finefocus-533	26	2	undesired	undesired	ADJ
finefocus-533	26	3	impact	impact	NOUN
finefocus-533	26	4	from	from	ADP
finefocus-533	26	5	mining	mining	NOUN
finefocus-533	26	6	can	can	AUX
finefocus-533	26	7	lead	lead	VERB
finefocus-533	26	8	to	to	ADP
finefocus-533	26	9	both	both	CCONJ
finefocus-533	26	10	economic	economic	ADJ
finefocus-533	26	11	and	and	CCONJ
finefocus-533	26	12	conservationbased	conservationbase	VERB
finefocus-533	26	13	environmental	environmental	ADJ
finefocus-533	26	14	issues	issue	NOUN
finefocus-533	26	15	for	for	ADP
finefocus-533	26	16	biological	biological	ADJ
finefocus-533	26	17	organisms	organism	NOUN
finefocus-533	26	18	living	live	VERB
finefocus-533	26	19	downstream	downstream	NOUN
finefocus-533	26	20	of	of	ADP
finefocus-533	26	21	an	an	DET
finefocus-533	26	22	acidified	acidify	VERB
finefocus-533	26	23	heavy	heavy	ADJ
finefocus-533	26	24	-	-	PUNCT
finefocus-533	26	25	metal	metal	NOUN
finefocus-533	26	26	leaching	leaching	NOUN
finefocus-533	26	27	water	water	NOUN
finefocus-533	26	28	source	source	NOUN
finefocus-533	26	29	.	.	PUNCT
finefocus-533	27	1	studying	study	VERB
finefocus-533	27	2	microbial	microbial	ADJ
finefocus-533	27	3	ecology	ecology	NOUN
finefocus-533	27	4	associated	associate	VERB
finefocus-533	27	5	with	with	ADP
finefocus-533	27	6	amd	amd	PROPN
finefocus-533	27	7	sources	source	NOUN
finefocus-533	27	8	has	have	AUX
finefocus-533	27	9	historically	historically	ADV
finefocus-533	27	10	been	be	AUX
finefocus-533	27	11	fruitful	fruitful	ADJ
finefocus-533	27	12	in	in	ADP
finefocus-533	27	13	gaining	gain	VERB
finefocus-533	27	14	insight	insight	NOUN
finefocus-533	27	15	into	into	ADP
finefocus-533	27	16	microbial	microbial	ADJ
finefocus-533	27	17	interactions	interaction	NOUN
finefocus-533	27	18	,	,	PUNCT
finefocus-533	27	19	as	as	SCONJ
finefocus-533	27	20	the	the	DET
finefocus-533	27	21	harsh	harsh	ADJ
finefocus-533	27	22	conditions	condition	NOUN
finefocus-533	27	23	yield	yield	VERB
finefocus-533	27	24	an	an	DET
finefocus-533	27	25	ecosystem	ecosystem	NOUN
finefocus-533	27	26	with	with	ADP
finefocus-533	27	27	low	low	ADJ
finefocus-533	27	28	complexity	complexity	NOUN
finefocus-533	27	29	(	(	PUNCT
finefocus-533	27	30	3	3	NUM
finefocus-533	27	31	,	,	PUNCT
finefocus-533	27	32	22	22	NUM
finefocus-533	27	33	)	)	PUNCT
finefocus-533	27	34	.	.	PUNCT
finefocus-533	28	1	knowledge	knowledge	NOUN
finefocus-533	28	2	gained	gain	VERB
finefocus-533	28	3	from	from	ADP
finefocus-533	28	4	understanding	understand	VERB
finefocus-533	28	5	microbial	microbial	ADJ
finefocus-533	28	6	interactions	interaction	NOUN
finefocus-533	28	7	in	in	ADP
finefocus-533	28	8	amd	amd	PROPN
finefocus-533	28	9	has	have	VERB
finefocus-533	28	10	the	the	DET
finefocus-533	28	11	potential	potential	NOUN
finefocus-533	28	12	to	to	PART
finefocus-533	28	13	be	be	AUX
finefocus-533	28	14	applied	apply	VERB
finefocus-533	28	15	to	to	ADP
finefocus-533	28	16	promising	promise	VERB
finefocus-533	28	17	fields	field	NOUN
finefocus-533	28	18	associated	associate	VERB
finefocus-533	28	19	with	with	ADP
finefocus-533	28	20	the	the	DET
finefocus-533	28	21	mining	mining	NOUN
finefocus-533	28	22	industry	industry	NOUN
finefocus-533	28	23	,	,	PUNCT
finefocus-533	28	24	including	include	VERB
finefocus-533	28	25	biomining	biomine	VERB
finefocus-533	28	26	and	and	CCONJ
finefocus-533	28	27	bioremediation	bioremediation	NOUN
finefocus-533	28	28	of	of	ADP
finefocus-533	28	29	amd	amd	NOUN
finefocus-533	28	30	(	(	PUNCT
finefocus-533	28	31	6	6	NUM
finefocus-533	28	32	)	)	PUNCT
finefocus-533	28	33	.	.	PUNCT
finefocus-533	29	1	biomining	biomine	VERB
finefocus-533	29	2	has	have	VERB
finefocus-533	29	3	the	the	DET
finefocus-533	29	4	potential	potential	NOUN
finefocus-533	29	5	to	to	PART
finefocus-533	29	6	extract	extract	VERB
finefocus-533	29	7	trace	trace	NOUN
finefocus-533	29	8	metals	metal	NOUN
finefocus-533	29	9	via	via	ADP
finefocus-533	29	10	bioleaching	bioleache	VERB
finefocus-533	29	11	in	in	ADP
finefocus-533	29	12	an	an	DET
finefocus-533	29	13	efficient	efficient	ADJ
finefocus-533	29	14	and	and	CCONJ
finefocus-533	29	15	environmentally	environmentally	ADV
finefocus-533	29	16	conscious	conscious	ADJ
finefocus-533	29	17	way	way	NOUN
finefocus-533	29	18	and	and	CCONJ
finefocus-533	29	19	perhaps	perhaps	ADV
finefocus-533	29	20	even	even	ADV
finefocus-533	29	21	remine	remine	ADJ
finefocus-533	29	22	minerals	mineral	NOUN
finefocus-533	29	23	that	that	PRON
finefocus-533	29	24	historically	historically	ADV
finefocus-533	29	25	were	be	AUX
finefocus-533	29	26	not	not	PART
finefocus-533	29	27	at	at	ADP
finefocus-533	29	28	a	a	DET
finefocus-533	29	29	sufficient	sufficient	ADJ
finefocus-533	29	30	concentration	concentration	NOUN
finefocus-533	29	31	to	to	PART
finefocus-533	29	32	warrant	warrant	VERB
finefocus-533	29	33	previous	previous	ADJ
finefocus-533	29	34	efforts	effort	NOUN
finefocus-533	29	35	.	.	PUNCT
finefocus-533	30	1	bioremediation	bioremediation	NOUN
finefocus-533	30	2	,	,	PUNCT
finefocus-533	30	3	on	on	ADP
finefocus-533	30	4	the	the	DET
finefocus-533	30	5	other	other	ADJ
finefocus-533	30	6	hand	hand	NOUN
finefocus-533	30	7	,	,	PUNCT
finefocus-533	30	8	can	can	AUX
finefocus-533	30	9	be	be	AUX
finefocus-533	30	10	harnessed	harness	VERB
finefocus-533	30	11	as	as	ADP
finefocus-533	30	12	a	a	DET
finefocus-533	30	13	desired	desire	VERB
finefocus-533	30	14	passive	passive	ADJ
finefocus-533	30	15	approach	approach	NOUN
finefocus-533	30	16	to	to	ADP
finefocus-533	30	17	44•	44•	NUM
finefocus-533	30	18	fine	fine	ADJ
finefocus-533	30	19	focus	focus	NOUN
finefocus-533	30	20	,	,	PUNCT
finefocus-533	30	21	vol	vol	NOUN
finefocus-533	30	22	.	.	PUNCT
finefocus-533	30	23	4(1	4(1	NOUN
finefocus-533	30	24	)	)	PUNCT
finefocus-533	30	25	naturally	naturally	ADV
finefocus-533	30	26	address	address	VERB
finefocus-533	30	27	amd	amd	NOUN
finefocus-533	30	28	through	through	ADP
finefocus-533	30	29	microbial	microbial	ADJ
finefocus-533	30	30	reduction	reduction	NOUN
finefocus-533	30	31	of	of	ADP
finefocus-533	30	32	metal	metal	NOUN
finefocus-533	30	33	oxides	oxide	NOUN
finefocus-533	30	34	,	,	PUNCT
finefocus-533	30	35	thus	thus	ADV
finefocus-533	30	36	increasing	increase	VERB
finefocus-533	30	37	ph	ph	NOUN
finefocus-533	30	38	and	and	CCONJ
finefocus-533	30	39	precipitating	precipitate	VERB
finefocus-533	30	40	heavy	heavy	ADJ
finefocus-533	30	41	metals	metal	NOUN
finefocus-533	30	42	.	.	PUNCT
finefocus-533	31	1	this	this	DET
finefocus-533	31	2	passive	passive	ADJ
finefocus-533	31	3	approach	approach	NOUN
finefocus-533	31	4	is	be	AUX
finefocus-533	31	5	generally	generally	ADV
finefocus-533	31	6	more	more	ADV
finefocus-533	31	7	economically	economically	ADV
finefocus-533	31	8	sustainable	sustainable	ADJ
finefocus-533	31	9	compared	compare	VERB
finefocus-533	31	10	to	to	ADP
finefocus-533	31	11	intensive	intensive	ADJ
finefocus-533	31	12	active	active	ADJ
finefocus-533	31	13	approaches	approach	NOUN
finefocus-533	31	14	(	(	PUNCT
finefocus-533	31	15	e.g.	e.g.	ADV
finefocus-533	31	16	,	,	PUNCT
finefocus-533	31	17	lime	lime	NOUN
finefocus-533	31	18	treatment	treatment	NOUN
finefocus-533	31	19	,	,	PUNCT
finefocus-533	31	20	filtering	filtering	NOUN
finefocus-533	31	21	)	)	PUNCT
finefocus-533	31	22	(	(	PUNCT
finefocus-533	31	23	24	24	NUM
finefocus-533	31	24	)	)	PUNCT
finefocus-533	31	25	.	.	PUNCT
finefocus-533	32	1	for	for	ADP
finefocus-533	32	2	this	this	DET
finefocus-533	32	3	project	project	NOUN
finefocus-533	32	4	,	,	PUNCT
finefocus-533	32	5	we	we	PRON
finefocus-533	32	6	are	be	AUX
finefocus-533	32	7	specifically	specifically	ADV
finefocus-533	32	8	interested	interested	ADJ
finefocus-533	32	9	in	in	ADP
finefocus-533	32	10	characterizing	characterize	VERB
finefocus-533	32	11	the	the	DET
finefocus-533	32	12	microbial	microbial	ADJ
finefocus-533	32	13	ecology	ecology	NOUN
finefocus-533	32	14	of	of	ADP
finefocus-533	32	15	microbes	microbe	NOUN
finefocus-533	32	16	associated	associate	VERB
finefocus-533	32	17	with	with	ADP
finefocus-533	32	18	amd	amd	PROPN
finefocus-533	32	19	produced	produce	VERB
finefocus-533	32	20	from	from	ADP
finefocus-533	32	21	the	the	DET
finefocus-533	32	22	abandoned	abandon	VERB
finefocus-533	32	23	solomon	solomon	PROPN
finefocus-533	32	24	mine	mine	PROPN
finefocus-533	32	25	along	along	ADP
finefocus-533	32	26	east	east	PROPN
finefocus-533	32	27	willow	willow	PROPN
finefocus-533	32	28	creek	creek	PROPN
finefocus-533	32	29	(	(	PUNCT
finefocus-533	32	30	ewc	ewc	PROPN
finefocus-533	32	31	)	)	PUNCT
finefocus-533	32	32	near	near	ADP
finefocus-533	32	33	the	the	DET
finefocus-533	32	34	town	town	NOUN
finefocus-533	32	35	of	of	ADP
finefocus-533	32	36	creede	creede	PROPN
finefocus-533	32	37	,	,	PUNCT
finefocus-533	32	38	colorado	colorado	PROPN
finefocus-533	32	39	.	.	PUNCT
finefocus-533	33	1	the	the	DET
finefocus-533	33	2	solomon	solomon	PROPN
finefocus-533	33	3	mine	mine	PROPN
finefocus-533	33	4	was	be	AUX
finefocus-533	33	5	established	establish	VERB
finefocus-533	33	6	in	in	ADP
finefocus-533	33	7	1890	1890	NUM
finefocus-533	33	8	along	along	ADP
finefocus-533	33	9	ewc	ewc	PROPN
finefocus-533	33	10	in	in	ADP
finefocus-533	33	11	the	the	DET
finefocus-533	33	12	south	south	PROPN
finefocus-533	33	13	san	san	PROPN
finefocus-533	33	14	juan	juan	PROPN
finefocus-533	33	15	mountains	mountains	PROPN
finefocus-533	33	16	(	(	PUNCT
finefocus-533	33	17	figure	figure	NOUN
finefocus-533	33	18	1	1	NUM
finefocus-533	33	19	)	)	PUNCT
finefocus-533	33	20	.	.	PUNCT
finefocus-533	34	1	the	the	DET
finefocus-533	34	2	mine	mine	NOUN
finefocus-533	34	3	has	have	AUX
finefocus-533	34	4	been	be	AUX
finefocus-533	34	5	worked	work	VERB
finefocus-533	34	6	sporadically	sporadically	ADV
finefocus-533	34	7	with	with	ADP
finefocus-533	34	8	the	the	DET
finefocus-533	34	9	primary	primary	ADJ
finefocus-533	34	10	minerals	mineral	NOUN
finefocus-533	34	11	mined	mine	VERB
finefocus-533	34	12	at	at	ADP
finefocus-533	34	13	the	the	DET
finefocus-533	34	14	site	site	NOUN
finefocus-533	34	15	including	include	VERB
finefocus-533	34	16	galena	galena	NOUN
finefocus-533	34	17	(	(	PUNCT
finefocus-533	34	18	lead	lead	NOUN
finefocus-533	34	19	sulfide	sulfide	NOUN
finefocus-533	34	20	)	)	PUNCT
finefocus-533	34	21	,	,	PUNCT
finefocus-533	34	22	sphalerite	sphalerite	ADJ
finefocus-533	34	23	(	(	PUNCT
finefocus-533	34	24	zinc	zinc	NOUN
finefocus-533	34	25	sulfide	sulfide	NOUN
finefocus-533	34	26	)	)	PUNCT
finefocus-533	34	27	,	,	PUNCT
finefocus-533	34	28	pyrite	pyrite	NOUN
finefocus-533	34	29	(	(	PUNCT
finefocus-533	34	30	iron	iron	NOUN
finefocus-533	34	31	sulfide	sulfide	NOUN
finefocus-533	34	32	)	)	PUNCT
finefocus-533	34	33	,	,	PUNCT
finefocus-533	34	34	and	and	CCONJ
finefocus-533	34	35	minor	minor	ADJ
finefocus-533	34	36	chalcopyrite	chalcopyrite	NOUN
finefocus-533	34	37	(	(	PUNCT
finefocus-533	34	38	copper	copper	NOUN
finefocus-533	34	39	and	and	CCONJ
finefocus-533	34	40	iron	iron	NOUN
finefocus-533	34	41	sulfide	sulfide	NOUN
finefocus-533	34	42	)	)	PUNCT
finefocus-533	34	43	up	up	ADV
finefocus-533	34	44	until	until	ADP
finefocus-533	34	45	its	its	PRON
finefocus-533	34	46	formal	formal	ADJ
finefocus-533	34	47	decommission	decommission	NOUN
finefocus-533	34	48	in	in	ADP
finefocus-533	34	49	1971	1971	NUM
finefocus-533	34	50	(	(	PUNCT
finefocus-533	34	51	15	15	NUM
finefocus-533	34	52	,	,	PUNCT
finefocus-533	34	53	23	23	NUM
finefocus-533	34	54	)	)	PUNCT
finefocus-533	34	55	.	.	PUNCT
finefocus-533	35	1	the	the	DET
finefocus-533	35	2	mine	mine	NOUN
finefocus-533	35	3	also	also	ADV
finefocus-533	35	4	produced	produce	VERB
finefocus-533	35	5	minor	minor	ADJ
finefocus-533	35	6	gold	gold	NOUN
finefocus-533	35	7	and	and	CCONJ
finefocus-533	35	8	even	even	ADV
finefocus-533	35	9	less	less	ADJ
finefocus-533	35	10	silver	silver	NOUN
finefocus-533	35	11	.	.	PUNCT
finefocus-533	36	1	in	in	ADP
finefocus-533	36	2	1991	1991	NUM
finefocus-533	36	3	,	,	PUNCT
finefocus-533	36	4	a	a	DET
finefocus-533	36	5	passive	passive	ADJ
finefocus-533	36	6	mine	mine	NOUN
finefocus-533	36	7	drainage	drainage	NOUN
finefocus-533	36	8	treatment	treatment	NOUN
finefocus-533	36	9	system	system	NOUN
finefocus-533	36	10	was	be	AUX
finefocus-533	36	11	constructed	construct	VERB
finefocus-533	36	12	by	by	ADP
finefocus-533	36	13	the	the	DET
finefocus-533	36	14	colorado	colorado	NOUN
finefocus-533	36	15	mined	mine	VERB
finefocus-533	36	16	land	land	NOUN
finefocus-533	36	17	reclamation	reclamation	NOUN
finefocus-533	36	18	division	division	NOUN
finefocus-533	36	19	(	(	PUNCT
finefocus-533	36	20	now	now	ADV
finefocus-533	36	21	called	call	VERB
finefocus-533	36	22	colorado	colorado	NOUN
finefocus-533	36	23	division	division	NOUN
finefocus-533	36	24	of	of	ADP
finefocus-533	36	25	reclamation	reclamation	NOUN
finefocus-533	36	26	,	,	PUNCT
finefocus-533	36	27	mining	mining	NOUN
finefocus-533	36	28	,	,	PUNCT
finefocus-533	36	29	and	and	CCONJ
finefocus-533	36	30	safety	safety	NOUN
finefocus-533	36	31	)	)	PUNCT
finefocus-533	36	32	to	to	PART
finefocus-533	36	33	reduce	reduce	VERB
finefocus-533	36	34	the	the	DET
finefocus-533	36	35	load	load	NOUN
finefocus-533	36	36	of	of	ADP
finefocus-533	36	37	heavy	heavy	ADJ
finefocus-533	36	38	metals	metal	NOUN
finefocus-533	36	39	moving	move	VERB
finefocus-533	36	40	into	into	ADP
finefocus-533	36	41	ewc	ewc	PROPN
finefocus-533	36	42	.	.	PUNCT
finefocus-533	37	1	the	the	DET
finefocus-533	37	2	system	system	NOUN
finefocus-533	37	3	consisted	consist	VERB
finefocus-533	37	4	of	of	ADP
finefocus-533	37	5	three	three	NUM
finefocus-533	37	6	constructed	construct	VERB
finefocus-533	37	7	wetland	wetland	NOUN
finefocus-533	37	8	cells	cell	NOUN
finefocus-533	37	9	.	.	PUNCT
finefocus-533	38	1	amd	amd	ADJ
finefocus-533	38	2	from	from	ADP
finefocus-533	38	3	the	the	DET
finefocus-533	38	4	adit	adit	NOUN
finefocus-533	38	5	flowed	flow	VERB
finefocus-533	38	6	by	by	ADP
finefocus-533	38	7	gravity	gravity	NOUN
finefocus-533	38	8	through	through	ADP
finefocus-533	38	9	the	the	DET
finefocus-533	38	10	cells	cell	NOUN
finefocus-533	38	11	.	.	PUNCT
finefocus-533	39	1	as	as	SCONJ
finefocus-533	39	2	originally	originally	ADV
finefocus-533	39	3	constructed	construct	VERB
finefocus-533	39	4	,	,	PUNCT
finefocus-533	39	5	cell	cell	NOUN
finefocus-533	39	6	1	1	NUM
finefocus-533	39	7	was	be	AUX
finefocus-533	39	8	filled	fill	VERB
finefocus-533	39	9	with	with	ADP
finefocus-533	39	10	alfalfa	alfalfa	PROPN
finefocus-533	39	11	hay	hay	PROPN
finefocus-533	39	12	,	,	PUNCT
finefocus-533	39	13	cell	cell	NOUN
finefocus-533	39	14	2	2	NUM
finefocus-533	39	15	contained	contain	VERB
finefocus-533	39	16	wood	wood	NOUN
finefocus-533	39	17	chips	chip	NOUN
finefocus-533	39	18	,	,	PUNCT
finefocus-533	39	19	and	and	CCONJ
finefocus-533	39	20	a	a	DET
finefocus-533	39	21	mixture	mixture	NOUN
finefocus-533	39	22	of	of	ADP
finefocus-533	39	23	spent	spend	VERB
finefocus-533	39	24	mushroom	mushroom	NOUN
finefocus-533	39	25	compost	compost	NOUN
finefocus-533	39	26	and	and	CCONJ
finefocus-533	39	27	wood	wood	NOUN
finefocus-533	39	28	chips	chip	NOUN
finefocus-533	39	29	were	be	AUX
finefocus-533	39	30	placed	place	VERB
finefocus-533	39	31	in	in	ADP
finefocus-533	39	32	cell	cell	NOUN
finefocus-533	39	33	3	3	NUM
finefocus-533	39	34	.	.	PUNCT
finefocus-533	40	1	the	the	DET
finefocus-533	40	2	system	system	NOUN
finefocus-533	40	3	worked	work	VERB
finefocus-533	40	4	well	well	ADV
finefocus-533	40	5	for	for	ADP
finefocus-533	40	6	a	a	DET
finefocus-533	40	7	few	few	ADJ
finefocus-533	40	8	years	year	NOUN
finefocus-533	40	9	,	,	PUNCT
finefocus-533	40	10	but	but	CCONJ
finefocus-533	40	11	a	a	DET
finefocus-533	40	12	lack	lack	NOUN
finefocus-533	40	13	of	of	ADP
finefocus-533	40	14	funds	fund	NOUN
finefocus-533	40	15	for	for	ADP
finefocus-533	40	16	upkeep	upkeep	NOUN
finefocus-533	40	17	and	and	CCONJ
finefocus-533	40	18	maintenance	maintenance	NOUN
finefocus-533	40	19	dramatically	dramatically	ADV
finefocus-533	40	20	reduced	reduce	VERB
finefocus-533	40	21	the	the	DET
finefocus-533	40	22	efficiency	efficiency	NOUN
finefocus-533	40	23	of	of	ADP
finefocus-533	40	24	the	the	DET
finefocus-533	40	25	constructed	construct	VERB
finefocus-533	40	26	wetland	wetland	NOUN
finefocus-533	40	27	system	system	NOUN
finefocus-533	40	28	and	and	CCONJ
finefocus-533	40	29	only	only	ADV
finefocus-533	40	30	very	very	ADV
finefocus-533	40	31	minor	minor	ADJ
finefocus-533	40	32	levels	level	NOUN
finefocus-533	40	33	of	of	ADP
finefocus-533	40	34	dissolved	dissolve	VERB
finefocus-533	40	35	metals	metal	NOUN
finefocus-533	40	36	currently	currently	ADV
finefocus-533	40	37	are	be	AUX
finefocus-533	40	38	being	be	AUX
finefocus-533	40	39	removed	remove	VERB
finefocus-533	40	40	from	from	ADP
finefocus-533	40	41	amd	amd	PROPN
finefocus-533	40	42	that	that	PRON
finefocus-533	40	43	passes	pass	VERB
finefocus-533	40	44	through	through	ADP
finefocus-533	40	45	the	the	DET
finefocus-533	40	46	system	system	NOUN
finefocus-533	40	47	(	(	PUNCT
finefocus-533	40	48	47	47	NUM
finefocus-533	40	49	)	)	PUNCT
finefocus-533	40	50	.	.	PUNCT
finefocus-533	41	1	willow	willow	PROPN
finefocus-533	41	2	creek	creek	PROPN
finefocus-533	41	3	reclamation	reclamation	NOUN
finefocus-533	41	4	committee	committee	PROPN
finefocus-533	41	5	(	(	PUNCT
finefocus-533	41	6	wcrc	wcrc	PROPN
finefocus-533	41	7	)	)	PUNCT
finefocus-533	41	8	is	be	AUX
finefocus-533	41	9	contemplating	contemplate	VERB
finefocus-533	41	10	the	the	DET
finefocus-533	41	11	renovation	renovation	NOUN
finefocus-533	41	12	or	or	CCONJ
finefocus-533	41	13	rebuilding	rebuilding	NOUN
finefocus-533	41	14	of	of	ADP
finefocus-533	41	15	the	the	DET
finefocus-533	41	16	constructed	construct	VERB
finefocus-533	41	17	wetland	wetland	NOUN
finefocus-533	41	18	system	system	NOUN
finefocus-533	41	19	.	.	PUNCT
finefocus-533	42	1	local	local	ADJ
finefocus-533	42	2	geochemistry	geochemistry	NOUN
finefocus-533	42	3	greatly	greatly	ADV
finefocus-533	42	4	influences	influence	VERB
finefocus-533	42	5	amd	amd	PRON
finefocus-533	42	6	microbial	microbial	ADJ
finefocus-533	42	7	ecosystems	ecosystem	NOUN
finefocus-533	42	8	;	;	PUNCT
finefocus-533	42	9	thus	thus	ADV
finefocus-533	42	10	,	,	PUNCT
finefocus-533	42	11	it	it	PRON
finefocus-533	42	12	is	be	AUX
finefocus-533	42	13	important	important	ADJ
finefocus-533	42	14	to	to	PART
finefocus-533	42	15	characterize	characterize	VERB
finefocus-533	42	16	this	this	DET
finefocus-533	42	17	site	site	NOUN
finefocus-533	42	18	to	to	PART
finefocus-533	42	19	understand	understand	VERB
finefocus-533	42	20	the	the	DET
finefocus-533	42	21	dynamics	dynamic	NOUN
finefocus-533	42	22	within	within	ADP
finefocus-533	42	23	the	the	DET
finefocus-533	42	24	solomon	solomon	PROPN
finefocus-533	42	25	mine	mine	PROPN
finefocus-533	42	26	amd	amd	PROPN
finefocus-533	42	27	microbiome	microbiome	NOUN
finefocus-533	42	28	for	for	ADP
finefocus-533	42	29	future	future	ADJ
finefocus-533	42	30	intervention	intervention	NOUN
finefocus-533	42	31	efforts	effort	NOUN
finefocus-533	42	32	(	(	PUNCT
finefocus-533	42	33	5	5	NUM
finefocus-533	42	34	,	,	PUNCT
finefocus-533	42	35	27	27	NUM
finefocus-533	42	36	)	)	PUNCT
finefocus-533	42	37	.	.	PUNCT
finefocus-533	43	1	we	we	PRON
finefocus-533	43	2	undertook	undertake	VERB
finefocus-533	43	3	an	an	DET
finefocus-533	43	4	initial	initial	ADJ
finefocus-533	43	5	survey	survey	NOUN
finefocus-533	43	6	of	of	ADP
finefocus-533	43	7	the	the	DET
finefocus-533	43	8	pre	pre	ADJ
finefocus-533	43	9	-	-	ADJ
finefocus-533	43	10	intervention	intervention	ADJ
finefocus-533	43	11	microbial	microbial	ADJ
finefocus-533	43	12	phylotype	phylotype	NOUN
finefocus-533	43	13	composition	composition	NOUN
finefocus-533	43	14	and	and	CCONJ
finefocus-533	43	15	diversity	diversity	NOUN
finefocus-533	43	16	,	,	PUNCT
finefocus-533	43	17	with	with	ADP
finefocus-533	43	18	the	the	DET
finefocus-533	43	19	aim	aim	NOUN
finefocus-533	43	20	of	of	ADP
finefocus-533	43	21	identifying	identify	VERB
finefocus-533	43	22	focused	focused	ADJ
finefocus-533	43	23	investigatory	investigatory	NOUN
finefocus-533	43	24	questions	question	NOUN
finefocus-533	43	25	and	and	CCONJ
finefocus-533	43	26	monitoring	monitor	VERB
finefocus-533	43	27	future	future	ADJ
finefocus-533	43	28	microbial	microbial	ADJ
finefocus-533	43	29	phylotype	phylotype	NOUN
finefocus-533	43	30	evolution	evolution	NOUN
finefocus-533	43	31	longitudinally	longitudinally	ADV
finefocus-533	43	32	after	after	ADP
finefocus-533	43	33	the	the	DET
finefocus-533	43	34	installation	installation	NOUN
finefocus-533	43	35	of	of	ADP
finefocus-533	43	36	a	a	DET
finefocus-533	43	37	functioning	function	VERB
finefocus-533	43	38	passive	passive	ADJ
finefocus-533	43	39	bioremediation	bioremediation	NOUN
finefocus-533	43	40	pond	pond	NOUN
finefocus-533	43	41	system	system	NOUN
finefocus-533	43	42	.	.	PUNCT
finefocus-533	44	1	experimentally	experimentally	ADV
finefocus-533	44	2	,	,	PUNCT
finefocus-533	44	3	we	we	PRON
finefocus-533	44	4	approached	approach	VERB
finefocus-533	44	5	the	the	DET
finefocus-533	44	6	characterization	characterization	NOUN
finefocus-533	44	7	of	of	ADP
finefocus-533	44	8	the	the	DET
finefocus-533	44	9	amd	amd	ADJ
finefocus-533	44	10	phylotype	phylotype	NOUN
finefocus-533	44	11	composition	composition	NOUN
finefocus-533	44	12	and	and	CCONJ
finefocus-533	44	13	diversity	diversity	NOUN
finefocus-533	44	14	using	use	VERB
finefocus-533	44	15	a	a	DET
finefocus-533	44	16	cultureindependent	cultureindependent	ADJ
finefocus-533	44	17	method	method	NOUN
finefocus-533	44	18	to	to	PART
finefocus-533	44	19	gain	gain	VERB
finefocus-533	44	20	an	an	DET
finefocus-533	44	21	inclusive	inclusive	ADJ
finefocus-533	44	22	profile	profile	NOUN
finefocus-533	44	23	of	of	ADP
finefocus-533	44	24	the	the	DET
finefocus-533	44	25	present	present	ADJ
finefocus-533	44	26	microbial	microbial	ADJ
finefocus-533	44	27	communities	community	NOUN
finefocus-533	44	28	(	(	PUNCT
finefocus-533	44	29	16	16	NUM
finefocus-533	44	30	)	)	PUNCT
finefocus-533	44	31	.	.	PUNCT
finefocus-533	45	1	preliminary	preliminary	ADJ
finefocus-533	45	2	community	community	NOUN
finefocus-533	45	3	profiling	profiling	NOUN
finefocus-533	45	4	was	be	AUX
finefocus-533	45	5	performed	perform	VERB
finefocus-533	45	6	by	by	ADP
finefocus-533	45	7	targeting	target	VERB
finefocus-533	45	8	the	the	DET
finefocus-533	45	9	ssu	ssu	PROPN
finefocus-533	45	10	16s	16s	PROPN
finefocus-533	45	11	rrna	rrna	PROPN
finefocus-533	45	12	marker	marker	NOUN
finefocus-533	45	13	gene	gene	NOUN
finefocus-533	45	14	with	with	ADP
finefocus-533	45	15	next	next	ADJ
finefocus-533	45	16	generation	generation	NOUN
finefocus-533	45	17	sequencing	sequence	VERB
finefocus-533	45	18	of	of	ADP
finefocus-533	45	19	the	the	DET
finefocus-533	45	20	resulting	result	VERB
finefocus-533	45	21	amplicons	amplicon	NOUN
finefocus-533	45	22	(	(	PUNCT
finefocus-533	45	23	14	14	NUM
finefocus-533	45	24	)	)	PUNCT
finefocus-533	45	25	coupled	couple	VERB
finefocus-533	45	26	with	with	ADP
finefocus-533	45	27	bioinformatic	bioinformatic	ADJ
finefocus-533	45	28	analysis	analysis	NOUN
finefocus-533	45	29	using	use	VERB
finefocus-533	45	30	usearch	usearch	NOUN
finefocus-533	45	31	(	(	PUNCT
finefocus-533	45	32	12	12	NUM
finefocus-533	45	33	)	)	PUNCT
finefocus-533	45	34	and	and	CCONJ
finefocus-533	45	35	quantitative	quantitative	ADJ
finefocus-533	45	36	insights	insight	NOUN
finefocus-533	45	37	into	into	ADP
finefocus-533	45	38	microbial	microbial	ADJ
finefocus-533	45	39	ecology	ecology	NOUN
finefocus-533	45	40	(	(	PUNCT
finefocus-533	45	41	qiime)-based	qiime)-base	VERB
finefocus-533	45	42	scripts	script	NOUN
finefocus-533	45	43	on	on	ADP
finefocus-533	45	44	the	the	DET
finefocus-533	45	45	resulting	result	VERB
finefocus-533	45	46	sequence	sequence	NOUN
finefocus-533	45	47	reads	read	NOUN
finefocus-533	45	48	(	(	PUNCT
finefocus-533	45	49	7	7	NUM
finefocus-533	45	50	,	,	PUNCT
finefocus-533	45	51	32	32	NUM
finefocus-533	45	52	)	)	PUNCT
finefocus-533	45	53	.	.	PUNCT
finefocus-533	46	1	here	here	ADV
finefocus-533	46	2	we	we	PRON
finefocus-533	46	3	describe	describe	VERB
finefocus-533	46	4	the	the	DET
finefocus-533	46	5	baseline	baseline	ADJ
finefocus-533	46	6	microbial	microbial	ADJ
finefocus-533	46	7	community	community	NOUN
finefocus-533	46	8	of	of	ADP
finefocus-533	46	9	solomon	solomon	PROPN
finefocus-533	46	10	mine	mine	PROPN
finefocus-533	46	11	amd	amd	PROPN
finefocus-533	46	12	and	and	CCONJ
finefocus-533	46	13	ewc	ewc	PROPN
finefocus-533	46	14	drainage	drainage	NOUN
finefocus-533	46	15	by	by	ADP
finefocus-533	46	16	using	use	VERB
finefocus-533	46	17	the	the	DET
finefocus-533	46	18	ssu	ssu	PROPN
finefocus-533	46	19	16s	16s	PROPN
finefocus-533	46	20	rrna	rrna	PROPN
finefocus-533	46	21	marker	marker	NOUN
finefocus-533	46	22	gene	gene	NOUN
finefocus-533	46	23	to	to	PART
finefocus-533	46	24	taxonomically	taxonomically	ADV
finefocus-533	46	25	profile	profile	VERB
finefocus-533	46	26	associated	associate	VERB
finefocus-533	46	27	sediment	sediment	NOUN
finefocus-533	46	28	samples	sample	NOUN
finefocus-533	46	29	.	.	PUNCT
finefocus-533	47	1	45applied	45applied	PROPN
finefocus-533	47	2	&	&	CCONJ
finefocus-533	47	3	environmental	environmental	ADJ
finefocus-533	47	4	microbiology	microbiology	NOUN
finefocus-533	47	5	•	•	NOUN
finefocus-533	47	6	figure	figure	NOUN
finefocus-533	47	7	1	1	NUM
finefocus-533	47	8	hillshade	hillshade	NOUN
finefocus-533	47	9	map	map	NOUN
finefocus-533	47	10	depicting	depict	VERB
finefocus-533	47	11	the	the	DET
finefocus-533	47	12	east	east	PROPN
finefocus-533	47	13	willow	willow	PROPN
finefocus-533	47	14	creek	creek	PROPN
finefocus-533	47	15	watershed	watershe	VERB
finefocus-533	47	16	in	in	ADP
finefocus-533	47	17	southwest	southwest	PROPN
finefocus-533	47	18	colorado	colorado	NOUN
finefocus-533	47	19	and	and	CCONJ
finefocus-533	47	20	the	the	DET
finefocus-533	47	21	solomon	solomon	PROPN
finefocus-533	47	22	mine	mine	PROPN
finefocus-533	47	23	project	project	PROPN
finefocus-533	47	24	area	area	NOUN
finefocus-533	47	25	,	,	PUNCT
finefocus-533	47	26	which	which	PRON
finefocus-533	47	27	includes	include	VERB
finefocus-533	47	28	both	both	CCONJ
finefocus-533	47	29	the	the	DET
finefocus-533	47	30	solomon	solomon	PROPN
finefocus-533	47	31	mine	mine	NOUN
finefocus-533	47	32	adit	adit	NOUN
finefocus-533	47	33	and	and	CCONJ
finefocus-533	47	34	associated	associate	VERB
finefocus-533	47	35	constructed	construct	VERB
finefocus-533	47	36	wetlands	wetland	NOUN
finefocus-533	47	37	along	along	ADP
finefocus-533	47	38	east	east	PROPN
finefocus-533	47	39	willow	willow	PROPN
finefocus-533	47	40	creek	creek	PROPN
finefocus-533	47	41	.	.	PUNCT
finefocus-533	48	1	46•	46•	NUM
finefocus-533	48	2	fine	fine	ADJ
finefocus-533	48	3	focus	focus	NOUN
finefocus-533	48	4	,	,	PUNCT
finefocus-533	48	5	vol	vol	NOUN
finefocus-533	48	6	.	.	PUNCT
finefocus-533	48	7	4(1	4(1	NOUN
finefocus-533	48	8	)	)	PUNCT
finefocus-533	48	9	materials	material	NOUN
finefocus-533	48	10	and	and	CCONJ
finefocus-533	48	11	methods	method	NOUN
finefocus-533	48	12	sample	sample	NOUN
finefocus-533	48	13	collection	collection	NOUN
finefocus-533	48	14	water	water	NOUN
finefocus-533	48	15	and	and	CCONJ
finefocus-533	48	16	sediment	sediment	NOUN
finefocus-533	48	17	samples	sample	NOUN
finefocus-533	48	18	were	be	AUX
finefocus-533	48	19	collected	collect	VERB
finefocus-533	48	20	on	on	ADP
finefocus-533	48	21	july	july	PROPN
finefocus-533	48	22	9	9	NUM
finefocus-533	48	23	,	,	PUNCT
finefocus-533	48	24	2015	2015	NUM
finefocus-533	48	25	in	in	ADP
finefocus-533	48	26	the	the	DET
finefocus-533	48	27	east	east	PROPN
finefocus-533	48	28	willow	willow	PROPN
finefocus-533	48	29	creek	creek	PROPN
finefocus-533	48	30	drainage	drainage	NOUN
finefocus-533	48	31	basin	basin	NOUN
finefocus-533	48	32	.	.	PUNCT
finefocus-533	49	1	the	the	DET
finefocus-533	49	2	following	follow	VERB
finefocus-533	49	3	sample	sample	NOUN
finefocus-533	49	4	locations	location	NOUN
finefocus-533	49	5	mirrored	mirror	VERB
finefocus-533	49	6	locations	location	NOUN
finefocus-533	49	7	used	use	VERB
finefocus-533	49	8	by	by	ADP
finefocus-533	49	9	willow	willow	PROPN
finefocus-533	49	10	creek	creek	PROPN
finefocus-533	49	11	reclamation	reclamation	NOUN
finefocus-533	49	12	committee	committee	NOUN
finefocus-533	49	13	for	for	ADP
finefocus-533	49	14	waterquality	waterquality	ADJ
finefocus-533	49	15	monitoring	monitoring	NOUN
finefocus-533	49	16	(	(	PUNCT
finefocus-533	49	17	marked	mark	VERB
finefocus-533	49	18	and	and	CCONJ
finefocus-533	49	19	labeled	label	VERB
finefocus-533	49	20	by	by	ADP
finefocus-533	49	21	wood	wood	NOUN
finefocus-533	49	22	stakes	stake	NOUN
finefocus-533	49	23	)	)	PUNCT
finefocus-533	49	24	along	along	ADP
finefocus-533	49	25	east	east	PROPN
finefocus-533	49	26	willow	willow	PROPN
finefocus-533	49	27	creek	creek	PROPN
finefocus-533	49	28	at	at	ADP
finefocus-533	49	29	site	site	NOUN
finefocus-533	49	30	a	a	DET
finefocus-533	49	31	(	(	PUNCT
finefocus-533	49	32	ew	ew	NOUN
finefocus-533	49	33	-	-	PUNCT
finefocus-533	49	34	a	a	NOUN
finefocus-533	49	35	)	)	PUNCT
finefocus-533	49	36	,	,	PUNCT
finefocus-533	49	37	site	site	NOUN
finefocus-533	49	38	g	g	PROPN
finefocus-533	49	39	(	(	PUNCT
finefocus-533	49	40	ew	ew	NOUN
finefocus-533	49	41	-	-	PUNCT
finefocus-533	49	42	g	g	NOUN
finefocus-533	49	43	)	)	PUNCT
finefocus-533	49	44	,	,	PUNCT
finefocus-533	49	45	from	from	ADP
finefocus-533	49	46	amd	amd	NOUN
finefocus-533	49	47	at	at	ADP
finefocus-533	49	48	the	the	DET
finefocus-533	49	49	solomon	solomon	PROPN
finefocus-533	49	50	mine	mine	PROPN
finefocus-533	49	51	adit	adit	PROPN
finefocus-533	49	52	portal	portal	NOUN
finefocus-533	49	53	just	just	ADV
finefocus-533	49	54	inside	inside	ADV
finefocus-533	49	55	and	and	CCONJ
finefocus-533	49	56	adjacent	adjacent	ADJ
finefocus-533	49	57	to	to	ADP
finefocus-533	49	58	the	the	DET
finefocus-533	49	59	bulkhead	bulkhead	NOUN
finefocus-533	49	60	(	(	PUNCT
finefocus-533	49	61	sma	sma	PROPN
finefocus-533	49	62	)	)	PUNCT
finefocus-533	49	63	,	,	PUNCT
finefocus-533	49	64	and	and	CCONJ
finefocus-533	49	65	the	the	DET
finefocus-533	49	66	solomon	solomon	PROPN
finefocus-533	49	67	mine	mine	PROPN
finefocus-533	49	68	wetland	wetland	NOUN
finefocus-533	49	69	discharge	discharge	NOUN
finefocus-533	49	70	(	(	PUNCT
finefocus-533	49	71	swd	swd	PROPN
finefocus-533	49	72	)	)	PUNCT
finefocus-533	49	73	.	.	PUNCT
finefocus-533	50	1	additional	additional	ADJ
finefocus-533	50	2	samples	sample	NOUN
finefocus-533	50	3	were	be	AUX
finefocus-533	50	4	obtained	obtain	VERB
finefocus-533	50	5	within	within	ADP
finefocus-533	50	6	the	the	DET
finefocus-533	50	7	solomon	solomon	PROPN
finefocus-533	50	8	mine	mine	PROPN
finefocus-533	50	9	adit	adit	NOUN
finefocus-533	50	10	~20	~20	ADP
finefocus-533	50	11	meters	meter	NOUN
finefocus-533	50	12	from	from	ADP
finefocus-533	50	13	the	the	DET
finefocus-533	50	14	bulkhead	bulkhead	NOUN
finefocus-533	50	15	(	(	PUNCT
finefocus-533	50	16	smt	smt	PROPN
finefocus-533	50	17	)	)	PUNCT
finefocus-533	50	18	and	and	CCONJ
finefocus-533	50	19	from	from	ADP
finefocus-533	50	20	a	a	DET
finefocus-533	50	21	central	central	ADJ
finefocus-533	50	22	position	position	NOUN
finefocus-533	50	23	within	within	ADP
finefocus-533	50	24	each	each	PRON
finefocus-533	50	25	of	of	ADP
finefocus-533	50	26	the	the	DET
finefocus-533	50	27	currently	currently	ADV
finefocus-533	50	28	defunct	defunct	ADJ
finefocus-533	50	29	constructed	construct	VERB
finefocus-533	50	30	wetland	wetland	NOUN
finefocus-533	50	31	system	system	NOUN
finefocus-533	50	32	cells	cell	NOUN
finefocus-533	50	33	(	(	PUNCT
finefocus-533	50	34	cell	cell	NOUN
finefocus-533	50	35	1	1	NUM
finefocus-533	50	36	,	,	PUNCT
finefocus-533	50	37	cell	cell	NOUN
finefocus-533	50	38	2	2	NUM
finefocus-533	50	39	,	,	PUNCT
finefocus-533	50	40	cell	cell	NOUN
finefocus-533	50	41	3	3	NUM
finefocus-533	50	42	)	)	PUNCT
finefocus-533	50	43	,	,	PUNCT
finefocus-533	50	44	and	and	CCONJ
finefocus-533	50	45	in	in	ADP
finefocus-533	50	46	east	east	PROPN
finefocus-533	50	47	willow	willow	PROPN
finefocus-533	50	48	creek	creek	PROPN
finefocus-533	50	49	immediately	immediately	ADV
finefocus-533	50	50	upstream	upstream	ADV
finefocus-533	50	51	of	of	ADP
finefocus-533	50	52	the	the	DET
finefocus-533	50	53	constructed	construct	VERB
finefocus-533	50	54	wetlands	wetland	NOUN
finefocus-533	50	55	(	(	PUNCT
finefocus-533	50	56	ew	ew	NOUN
finefocus-533	50	57	-	-	PUNCT
finefocus-533	50	58	usm	usm	NOUN
finefocus-533	50	59	)	)	PUNCT
finefocus-533	50	60	.	.	PUNCT
finefocus-533	51	1	the	the	DET
finefocus-533	51	2	samples	sample	NOUN
finefocus-533	51	3	associated	associate	VERB
finefocus-533	51	4	with	with	ADP
finefocus-533	51	5	the	the	DET
finefocus-533	51	6	solomon	solomon	PROPN
finefocus-533	51	7	mine	mine	PROPN
finefocus-533	51	8	were	be	AUX
finefocus-533	51	9	obtained	obtain	VERB
finefocus-533	51	10	with	with	ADP
finefocus-533	51	11	permission	permission	NOUN
finefocus-533	51	12	from	from	ADP
finefocus-533	51	13	willow	willow	PROPN
finefocus-533	51	14	creek	creek	PROPN
finefocus-533	51	15	reclamation	reclamation	NOUN
finefocus-533	51	16	committee	committee	NOUN
finefocus-533	51	17	.	.	PUNCT
finefocus-533	52	1	for	for	ADP
finefocus-533	52	2	the	the	DET
finefocus-533	52	3	collection	collection	NOUN
finefocus-533	52	4	of	of	ADP
finefocus-533	52	5	water	water	NOUN
finefocus-533	52	6	samples	sample	NOUN
finefocus-533	52	7	,	,	PUNCT
finefocus-533	52	8	sterile	sterile	ADJ
finefocus-533	52	9	nalgene	nalgene	ADJ
finefocus-533	52	10	polypropylene	polypropylene	NOUN
finefocus-533	52	11	bottles	bottle	NOUN
finefocus-533	52	12	were	be	AUX
finefocus-533	52	13	rinsed	rinse	VERB
finefocus-533	52	14	three	three	NUM
finefocus-533	52	15	times	time	NOUN
finefocus-533	52	16	with	with	ADP
finefocus-533	52	17	sample	sample	NOUN
finefocus-533	52	18	water	water	NOUN
finefocus-533	52	19	prior	prior	ADV
finefocus-533	52	20	to	to	ADP
finefocus-533	52	21	sample	sample	NOUN
finefocus-533	52	22	collection	collection	NOUN
finefocus-533	52	23	in	in	ADP
finefocus-533	52	24	undisturbed	undisturbed	ADJ
finefocus-533	52	25	water	water	NOUN
finefocus-533	52	26	.	.	PUNCT
finefocus-533	53	1	sediment	sediment	NOUN
finefocus-533	53	2	samples	sample	NOUN
finefocus-533	53	3	were	be	AUX
finefocus-533	53	4	collected	collect	VERB
finefocus-533	53	5	aseptically	aseptically	ADV
finefocus-533	53	6	from	from	ADP
finefocus-533	53	7	the	the	DET
finefocus-533	53	8	upper	upper	ADJ
finefocus-533	53	9	oxic	oxic	ADJ
finefocus-533	53	10	zone	zone	NOUN
finefocus-533	53	11	at	at	ADP
finefocus-533	53	12	three	three	NUM
finefocus-533	53	13	points	point	NOUN
finefocus-533	53	14	at	at	ADP
finefocus-533	53	15	1	1	NUM
finefocus-533	53	16	m	m	NOUN
finefocus-533	53	17	distances	distance	NOUN
finefocus-533	53	18	triangulated	triangulate	VERB
finefocus-533	53	19	and	and	CCONJ
finefocus-533	53	20	pooled	pool	VERB
finefocus-533	53	21	as	as	ADP
finefocus-533	53	22	a	a	DET
finefocus-533	53	23	single	single	ADJ
finefocus-533	53	24	sample	sample	NOUN
finefocus-533	53	25	in	in	ADP
finefocus-533	53	26	sterile	sterile	ADJ
finefocus-533	53	27	polypropylene	polypropylene	NOUN
finefocus-533	53	28	conical	conical	NOUN
finefocus-533	53	29	tubes	tube	NOUN
finefocus-533	53	30	.	.	PUNCT
finefocus-533	54	1	water	water	NOUN
finefocus-533	54	2	and	and	CCONJ
finefocus-533	54	3	sediment	sediment	NOUN
finefocus-533	54	4	samples	sample	NOUN
finefocus-533	54	5	were	be	AUX
finefocus-533	54	6	immediately	immediately	ADV
finefocus-533	54	7	placed	place	VERB
finefocus-533	54	8	on	on	ADP
finefocus-533	54	9	ice	ice	NOUN
finefocus-533	54	10	in	in	ADP
finefocus-533	54	11	a	a	DET
finefocus-533	54	12	cooler	cooler	NOUN
finefocus-533	54	13	for	for	ADP
finefocus-533	54	14	transport	transport	NOUN
finefocus-533	54	15	to	to	ADP
finefocus-533	54	16	the	the	DET
finefocus-533	54	17	laboratory	laboratory	NOUN
finefocus-533	54	18	.	.	PUNCT
finefocus-533	55	1	sediment	sediment	NOUN
finefocus-533	55	2	sample	sample	NOUN
finefocus-533	55	3	aliquots	aliquot	NOUN
finefocus-533	55	4	were	be	AUX
finefocus-533	55	5	stored	store	VERB
finefocus-533	55	6	at	at	ADP
finefocus-533	55	7	-80	-80	NOUN
finefocus-533	55	8	°	°	NOUN
finefocus-533	55	9	c	c	NOUN
finefocus-533	55	10	in	in	ADP
finefocus-533	55	11	the	the	DET
finefocus-533	55	12	laboratory	laboratory	NOUN
finefocus-533	55	13	until	until	SCONJ
finefocus-533	55	14	processed	process	VERB
finefocus-533	55	15	for	for	ADP
finefocus-533	55	16	dna	dna	PROPN
finefocus-533	55	17	extraction	extraction	NOUN
finefocus-533	55	18	.	.	PUNCT
finefocus-533	56	1	sample	sample	NOUN
finefocus-533	56	2	metadata	metadata	PROPN
finefocus-533	56	3	collection	collection	NOUN
finefocus-533	56	4	air	air	NOUN
finefocus-533	56	5	and	and	CCONJ
finefocus-533	56	6	water	water	NOUN
finefocus-533	56	7	temperature	temperature	NOUN
finefocus-533	56	8	,	,	PUNCT
finefocus-533	56	9	ph	ph	ADJ
finefocus-533	56	10	,	,	PUNCT
finefocus-533	56	11	and	and	CCONJ
finefocus-533	56	12	electrical	electrical	ADJ
finefocus-533	56	13	conductivity	conductivity	NOUN
finefocus-533	56	14	were	be	AUX
finefocus-533	56	15	measured	measure	VERB
finefocus-533	56	16	in	in	ADP
finefocus-533	56	17	the	the	DET
finefocus-533	56	18	field	field	NOUN
finefocus-533	56	19	using	use	VERB
finefocus-533	56	20	a	a	DET
finefocus-533	56	21	handheld	handheld	ADJ
finefocus-533	56	22	combination	combination	NOUN
finefocus-533	56	23	multimeter	multimeter	NOUN
finefocus-533	56	24	.	.	PUNCT
finefocus-533	57	1	a	a	DET
finefocus-533	57	2	handheld	handheld	ADJ
finefocus-533	57	3	gps	gps	NOUN
finefocus-533	57	4	unit	unit	NOUN
finefocus-533	57	5	determined	determine	VERB
finefocus-533	57	6	sample	sample	NOUN
finefocus-533	57	7	locations	location	NOUN
finefocus-533	57	8	in	in	ADP
finefocus-533	57	9	nad83	nad83	ADJ
finefocus-533	57	10	.	.	PUNCT
finefocus-533	58	1	laboratory	laboratory	NOUN
finefocus-533	58	2	ph	ph	NOUN
finefocus-533	58	3	and	and	CCONJ
finefocus-533	58	4	oxidation	oxidation	NOUN
finefocus-533	58	5	/	/	SYM
finefocus-533	58	6	reduction	reduction	NOUN
finefocus-533	58	7	potential	potential	NOUN
finefocus-533	58	8	were	be	AUX
finefocus-533	58	9	measured	measure	VERB
finefocus-533	58	10	~3	~3	NOUN
finefocus-533	58	11	hours	hour	NOUN
finefocus-533	58	12	after	after	ADP
finefocus-533	58	13	sample	sample	NOUN
finefocus-533	58	14	collection	collection	NOUN
finefocus-533	58	15	using	use	VERB
finefocus-533	58	16	a	a	DET
finefocus-533	58	17	vwr	vwr	PROPN
finefocus-533	58	18	symphony	symphony	ADJ
finefocus-533	58	19	multimeter	multimeter	NOUN
finefocus-533	58	20	device	device	NOUN
finefocus-533	58	21	.	.	PUNCT
finefocus-533	59	1	historical	historical	ADJ
finefocus-533	59	2	east	east	PROPN
finefocus-533	59	3	willow	willow	PROPN
finefocus-533	59	4	creek	creek	PROPN
finefocus-533	59	5	water	water	NOUN
finefocus-533	59	6	-	-	PUNCT
finefocus-533	59	7	quality	quality	NOUN
finefocus-533	59	8	monitoring	monitoring	NOUN
finefocus-533	59	9	data	datum	NOUN
finefocus-533	59	10	was	be	AUX
finefocus-533	59	11	obtained	obtain	VERB
finefocus-533	59	12	from	from	ADP
finefocus-533	59	13	willow	willow	PROPN
finefocus-533	59	14	creek	creek	PROPN
finefocus-533	59	15	reclamation	reclamation	NOUN
finefocus-533	59	16	committee	committee	NOUN
finefocus-533	59	17	(	(	PUNCT
finefocus-533	59	18	47	47	NUM
finefocus-533	59	19	)	)	PUNCT
finefocus-533	59	20	.	.	PUNCT
finefocus-533	60	1	16s	16s	PROPN
finefocus-533	60	2	rrna	rrna	PROPN
finefocus-533	60	3	gene	gene	NOUN
finefocus-533	60	4	amplicon	amplicon	NOUN
finefocus-533	60	5	sequencing	sequence	VERB
finefocus-533	60	6	total	total	ADJ
finefocus-533	60	7	genomic	genomic	ADJ
finefocus-533	60	8	dna	dna	NOUN
finefocus-533	60	9	was	be	AUX
finefocus-533	60	10	extracted	extract	VERB
finefocus-533	60	11	from	from	ADP
finefocus-533	60	12	0.25	0.25	NUM
finefocus-533	60	13	g	g	NOUN
finefocus-533	60	14	of	of	ADP
finefocus-533	60	15	sediment	sediment	NOUN
finefocus-533	60	16	per	per	ADP
finefocus-533	60	17	sample	sample	NOUN
finefocus-533	60	18	using	use	VERB
finefocus-533	60	19	a	a	DET
finefocus-533	60	20	mobio	mobio	NOUN
finefocus-533	60	21	powersoil	powersoil	NOUN
finefocus-533	60	22	kit	kit	NOUN
finefocus-533	60	23	following	follow	VERB
finefocus-533	60	24	the	the	DET
finefocus-533	60	25	manufacturer	manufacturer	NOUN
finefocus-533	60	26	’s	’s	PART
finefocus-533	60	27	instructions	instruction	NOUN
finefocus-533	60	28	(	(	PUNCT
finefocus-533	60	29	qiagen	qiagen	PROPN
finefocus-533	60	30	,	,	PUNCT
finefocus-533	60	31	carlsbad	carlsbad	PROPN
finefocus-533	60	32	,	,	PUNCT
finefocus-533	60	33	ca	ca	PROPN
finefocus-533	60	34	,	,	PUNCT
finefocus-533	60	35	usa	usa	PROPN
finefocus-533	60	36	)	)	PUNCT
finefocus-533	60	37	.	.	PUNCT
finefocus-533	61	1	illumina	illumina	PROPN
finefocus-533	61	2	515f	515f	PROPN
finefocus-533	61	3	and	and	CCONJ
finefocus-533	61	4	806r	806r	NOUN
finefocus-533	61	5	itag	itag	NOUN
finefocus-533	61	6	primers	primer	NOUN
finefocus-533	61	7	were	be	AUX
finefocus-533	61	8	designed	design	VERB
finefocus-533	61	9	based	base	VERB
finefocus-533	61	10	on	on	ADP
finefocus-533	61	11	caporaso	caporaso	PROPN
finefocus-533	61	12	et	et	PROPN
finefocus-533	61	13	al	al	PROPN
finefocus-533	61	14	.	.	PROPN
finefocus-533	62	1	(	(	PUNCT
finefocus-533	62	2	8)	8)	NUM
finefocus-533	62	3	and	and	CCONJ
finefocus-533	62	4	used	use	VERB
finefocus-533	62	5	to	to	PART
finefocus-533	62	6	amplify	amplify	VERB
finefocus-533	62	7	the	the	DET
finefocus-533	62	8	v4	v4	NOUN
finefocus-533	62	9	region	region	NOUN
finefocus-533	62	10	of	of	ADP
finefocus-533	62	11	the	the	DET
finefocus-533	62	12	16s	16s	PROPN
finefocus-533	62	13	rrna	rrna	PROPN
finefocus-533	62	14	gene	gene	NOUN
finefocus-533	62	15	.	.	PUNCT
finefocus-533	63	1	pcr	pcr	ADJ
finefocus-533	63	2	reactions	reaction	NOUN
finefocus-533	63	3	were	be	AUX
finefocus-533	63	4	composed	compose	VERB
finefocus-533	63	5	of	of	ADP
finefocus-533	63	6	a	a	DET
finefocus-533	63	7	final	final	ADJ
finefocus-533	63	8	concentration	concentration	NOUN
finefocus-533	63	9	of	of	ADP
finefocus-533	63	10	5	5	NUM
finefocus-533	63	11	-	-	SYM
finefocus-533	63	12	10	10	NUM
finefocus-533	63	13	ng	ng	PROPN
finefocus-533	63	14	of	of	ADP
finefocus-533	63	15	template	template	NOUN
finefocus-533	63	16	dna	dna	NOUN
finefocus-533	63	17	,	,	PUNCT
finefocus-533	63	18	0.8	0.8	NUM
finefocus-533	63	19	mm	mm	NUM
finefocus-533	63	20	dntp	dntp	NOUN
finefocus-533	63	21	’s	’s	PART
finefocus-533	63	22	,	,	PUNCT
finefocus-533	63	23	0.2	0.2	NUM
finefocus-533	63	24	µm	µm	ADP
finefocus-533	63	25	forward	forward	ADV
finefocus-533	63	26	and	and	CCONJ
finefocus-533	63	27	reverse	reverse	ADJ
finefocus-533	63	28	primers	primer	NOUN
finefocus-533	63	29	,	,	PUNCT
finefocus-533	63	30	1x	1x	NUM
finefocus-533	63	31	pcr	pcr	ADJ
finefocus-533	63	32	buffer	buffer	NOUN
finefocus-533	63	33	,	,	PUNCT
finefocus-533	63	34	and	and	CCONJ
finefocus-533	63	35	1x	1x	NUM
finefocus-533	63	36	promega	promega	PROPN
finefocus-533	63	37	gotaq	gotaq	PROPN
finefocus-533	63	38	with	with	ADP
finefocus-533	63	39	use	use	NOUN
finefocus-533	63	40	of	of	ADP
finefocus-533	63	41	a	a	DET
finefocus-533	63	42	bio	bio	ADJ
finefocus-533	63	43	-	-	ADJ
finefocus-533	63	44	rad	rad	NOUN
finefocus-533	63	45	mycycler	mycycler	NOUN
finefocus-533	63	46	.	.	PUNCT
finefocus-533	64	1	duplicate	duplicate	VERB
finefocus-533	64	2	pcr	pcr	ADJ
finefocus-533	64	3	reactions	reaction	NOUN
finefocus-533	64	4	were	be	AUX
finefocus-533	64	5	pooled	pool	VERB
finefocus-533	64	6	to	to	PART
finefocus-533	64	7	address	address	VERB
finefocus-533	64	8	pcr	pcr	ADJ
finefocus-533	64	9	drift	drift	NOUN
finefocus-533	64	10	(	(	PUNCT
finefocus-533	64	11	42	42	NUM
finefocus-533	64	12	)	)	PUNCT
finefocus-533	64	13	,	,	PUNCT
finefocus-533	64	14	were	be	AUX
finefocus-533	64	15	gel	gel	NOUN
finefocus-533	64	16	-	-	PUNCT
finefocus-533	64	17	purified	purified	ADJ
finefocus-533	64	18	using	use	VERB
finefocus-533	64	19	a	a	DET
finefocus-533	64	20	qiagen	qiagen	NOUN
finefocus-533	64	21	kit	kit	NOUN
finefocus-533	64	22	(	(	PUNCT
finefocus-533	64	23	qiagen	qiagen	PROPN
finefocus-533	64	24	,	,	PUNCT
finefocus-533	64	25	frederick	frederick	PROPN
finefocus-533	64	26	,	,	PUNCT
finefocus-533	64	27	md	md	PROPN
finefocus-533	64	28	,	,	PUNCT
finefocus-533	64	29	47applied	47applied	PROPN
finefocus-533	64	30	&	&	CCONJ
finefocus-533	64	31	environmental	environmental	ADJ
finefocus-533	64	32	microbiology	microbiology	PROPN
finefocus-533	64	33	•	•	PROPN
finefocus-533	64	34	usa	usa	PROPN
finefocus-533	64	35	)	)	PUNCT
finefocus-533	64	36	,	,	PUNCT
finefocus-533	64	37	and	and	CCONJ
finefocus-533	64	38	quantified	quantify	VERB
finefocus-533	64	39	using	use	VERB
finefocus-533	64	40	a	a	DET
finefocus-533	64	41	high	high	ADJ
finefocus-533	64	42	sensitivity	sensitivity	NOUN
finefocus-533	64	43	dsdna	dsdna	NOUN
finefocus-533	64	44	kit	kit	NOUN
finefocus-533	64	45	with	with	ADP
finefocus-533	64	46	a	a	DET
finefocus-533	64	47	qubit	qubit	NOUN
finefocus-533	64	48	3.0	3.0	NUM
finefocus-533	64	49	fluorometer	fluorometer	NOUN
finefocus-533	64	50	(	(	PUNCT
finefocus-533	64	51	life	life	NOUN
finefocus-533	64	52	technologies	technology	NOUN
finefocus-533	64	53	,	,	PUNCT
finefocus-533	64	54	carlsbad	carlsbad	PROPN
finefocus-533	64	55	,	,	PUNCT
finefocus-533	64	56	ca	ca	PROPN
finefocus-533	64	57	,	,	PUNCT
finefocus-533	64	58	usa	usa	PROPN
finefocus-533	64	59	)	)	PUNCT
finefocus-533	64	60	.	.	PUNCT
finefocus-533	65	1	processed	process	VERB
finefocus-533	65	2	sediment	sediment	NOUN
finefocus-533	65	3	samples	sample	NOUN
finefocus-533	65	4	were	be	AUX
finefocus-533	65	5	sent	send	VERB
finefocus-533	65	6	overnight	overnight	ADV
finefocus-533	65	7	on	on	ADP
finefocus-533	65	8	dry	dry	ADJ
finefocus-533	65	9	ice	ice	NOUN
finefocus-533	65	10	for	for	ADP
finefocus-533	65	11	sequencing	sequence	VERB
finefocus-533	65	12	preparation	preparation	NOUN
finefocus-533	65	13	and	and	CCONJ
finefocus-533	65	14	service	service	NOUN
finefocus-533	65	15	by	by	ADP
finefocus-533	65	16	wright	wright	PROPN
finefocus-533	65	17	laboratories	laboratory	NOUN
finefocus-533	65	18	(	(	PUNCT
finefocus-533	65	19	affiliated	affiliate	VERB
finefocus-533	65	20	with	with	ADP
finefocus-533	65	21	juniata	juniata	PROPN
finefocus-533	65	22	college	college	PROPN
finefocus-533	65	23	,	,	PUNCT
finefocus-533	65	24	huntingdon	huntingdon	PROPN
finefocus-533	65	25	,	,	PUNCT
finefocus-533	65	26	pa	pa	PROPN
finefocus-533	65	27	)	)	PUNCT
finefocus-533	65	28	.	.	PUNCT
finefocus-533	66	1	wright	wright	PROPN
finefocus-533	66	2	laboratories	laboratories	PROPN
finefocus-533	66	3	quality	quality	NOUN
finefocus-533	66	4	checked	check	VERB
finefocus-533	66	5	the	the	DET
finefocus-533	66	6	amplicon	amplicon	NOUN
finefocus-533	66	7	libraries	library	NOUN
finefocus-533	66	8	using	use	VERB
finefocus-533	66	9	a	a	DET
finefocus-533	66	10	2100	2100	NUM
finefocus-533	66	11	bioanalyzer	bioanalyzer	NOUN
finefocus-533	66	12	dna	dna	NOUN
finefocus-533	66	13	1000	1000	NUM
finefocus-533	66	14	chip	chip	NOUN
finefocus-533	66	15	and	and	CCONJ
finefocus-533	66	16	performed	perform	VERB
finefocus-533	66	17	150	150	NUM
finefocus-533	66	18	bp	bp	PROPN
finefocus-533	66	19	paired	pair	VERB
finefocus-533	66	20	-	-	PUNCT
finefocus-533	66	21	end	end	NOUN
finefocus-533	66	22	sequencing	sequence	VERB
finefocus-533	66	23	reads	read	NOUN
finefocus-533	66	24	using	use	VERB
finefocus-533	66	25	the	the	DET
finefocus-533	66	26	illumina	illumina	PROPN
finefocus-533	66	27	miseq	miseq	PROPN
finefocus-533	66	28	platform	platform	NOUN
finefocus-533	66	29	.	.	PUNCT
finefocus-533	67	1	bioinformatics	bioinformatics	NOUN
finefocus-533	67	2	analysis	analysis	NOUN
finefocus-533	67	3	and	and	CCONJ
finefocus-533	67	4	data	datum	NOUN
finefocus-533	67	5	visualization	visualization	NOUN
finefocus-533	67	6	the	the	DET
finefocus-533	67	7	sequencing	sequence	VERB
finefocus-533	67	8	service	service	NOUN
finefocus-533	67	9	carried	carry	VERB
finefocus-533	67	10	out	out	ADP
finefocus-533	67	11	by	by	ADP
finefocus-533	67	12	wright	wright	PROPN
finefocus-533	67	13	laboratories	laboratory	NOUN
finefocus-533	67	14	provided	provide	VERB
finefocus-533	67	15	the	the	DET
finefocus-533	67	16	authors	author	NOUN
finefocus-533	67	17	with	with	ADP
finefocus-533	67	18	the	the	DET
finefocus-533	67	19	raw	raw	ADJ
finefocus-533	67	20	sequence	sequence	NOUN
finefocus-533	67	21	reads	read	VERB
finefocus-533	67	22	via	via	ADP
finefocus-533	67	23	a	a	DET
finefocus-533	67	24	set	set	NOUN
finefocus-533	67	25	of	of	ADP
finefocus-533	67	26	demultiplexed	demultiplexed	ADJ
finefocus-533	67	27	fastq	fastq	ADJ
finefocus-533	67	28	files	file	NOUN
finefocus-533	67	29	for	for	ADP
finefocus-533	67	30	the	the	DET
finefocus-533	67	31	forward	forward	ADJ
finefocus-533	67	32	and	and	CCONJ
finefocus-533	67	33	reverse	reverse	ADJ
finefocus-533	67	34	reads	read	NOUN
finefocus-533	67	35	.	.	PUNCT
finefocus-533	68	1	the	the	DET
finefocus-533	68	2	authors	author	NOUN
finefocus-533	68	3	remotely	remotely	ADV
finefocus-533	68	4	utilized	utilize	VERB
finefocus-533	68	5	juniata	juniata	PROPN
finefocus-533	68	6	college	college	NOUN
finefocus-533	68	7	’s	’s	PART
finefocus-533	68	8	hhmi	hhmi	PROPN
finefocus-533	68	9	computing	compute	VERB
finefocus-533	68	10	cluster	cluster	NOUN
finefocus-533	68	11	server	server	NOUN
finefocus-533	68	12	to	to	PART
finefocus-533	68	13	run	run	VERB
finefocus-533	68	14	a	a	DET
finefocus-533	68	15	custom	custom	NOUN
finefocus-533	68	16	unixbased	unixbase	VERB
finefocus-533	68	17	usearch	usearch	NOUN
finefocus-533	68	18	/	/	SYM
finefocus-533	68	19	quantitative	quantitative	ADJ
finefocus-533	68	20	insights	insight	NOUN
finefocus-533	68	21	into	into	ADP
finefocus-533	68	22	microbial	microbial	ADJ
finefocus-533	68	23	ecology	ecology	NOUN
finefocus-533	68	24	(	(	PUNCT
finefocus-533	68	25	qiime	qiime	NOUN
finefocus-533	68	26	)	)	PUNCT
finefocus-533	68	27	pipeline	pipeline	NOUN
finefocus-533	68	28	to	to	PART
finefocus-533	68	29	process	process	VERB
finefocus-533	68	30	the	the	DET
finefocus-533	68	31	raw	raw	ADJ
finefocus-533	68	32	reads	read	NOUN
finefocus-533	68	33	.	.	PUNCT
finefocus-533	69	1	briefly	briefly	ADV
finefocus-533	69	2	,	,	PUNCT
finefocus-533	69	3	paired	pair	VERB
finefocus-533	69	4	end	end	NOUN
finefocus-533	69	5	reads	read	NOUN
finefocus-533	69	6	were	be	AUX
finefocus-533	69	7	merged	merge	VERB
finefocus-533	69	8	using	use	VERB
finefocus-533	69	9	a	a	DET
finefocus-533	69	10	minimal	minimal	ADJ
finefocus-533	69	11	overlap	overlap	NOUN
finefocus-533	69	12	of	of	ADP
finefocus-533	69	13	46	46	NUM
finefocus-533	69	14	bp	bp	PROPN
finefocus-533	69	15	and	and	CCONJ
finefocus-533	69	16	a	a	DET
finefocus-533	69	17	minimum	minimum	ADJ
finefocus-533	69	18	quality	quality	NOUN
finefocus-533	69	19	score	score	NOUN
finefocus-533	69	20	of	of	ADP
finefocus-533	69	21	36	36	NUM
finefocus-533	69	22	.	.	PUNCT
finefocus-533	70	1	quality	quality	NOUN
finefocus-533	70	2	filtering	filtering	NOUN
finefocus-533	70	3	of	of	ADP
finefocus-533	70	4	the	the	DET
finefocus-533	70	5	paired	pair	VERB
finefocus-533	70	6	reads	read	NOUN
finefocus-533	70	7	was	be	AUX
finefocus-533	70	8	performed	perform	VERB
finefocus-533	70	9	by	by	ADP
finefocus-533	70	10	trimming	trim	VERB
finefocus-533	70	11	reads	read	NOUN
finefocus-533	70	12	to	to	ADP
finefocus-533	70	13	252	252	NUM
finefocus-533	70	14	bp	bp	NOUN
finefocus-533	70	15	and	and	CCONJ
finefocus-533	70	16	a	a	DET
finefocus-533	70	17	maximum	maximum	ADJ
finefocus-533	70	18	average	average	ADJ
finefocus-533	70	19	expected	expect	VERB
finefocus-533	70	20	error	error	NOUN
finefocus-533	70	21	rate	rate	NOUN
finefocus-533	70	22	of	of	ADP
finefocus-533	70	23	1	1	NUM
finefocus-533	70	24	%	%	NOUN
finefocus-533	70	25	using	use	VERB
finefocus-533	70	26	usearch	usearch	NOUN
finefocus-533	70	27	v7	v7	NOUN
finefocus-533	70	28	(	(	PUNCT
finefocus-533	70	29	12	12	NUM
finefocus-533	70	30	)	)	PUNCT
finefocus-533	70	31	.	.	PUNCT
finefocus-533	71	1	usearch	usearch	PROPN
finefocus-533	71	2	v7	v7	PROPN
finefocus-533	71	3	was	be	AUX
finefocus-533	71	4	also	also	ADV
finefocus-533	71	5	used	use	VERB
finefocus-533	71	6	for	for	ADP
finefocus-533	71	7	sequence	sequence	NOUN
finefocus-533	71	8	dereplication	dereplication	NOUN
finefocus-533	71	9	,	,	PUNCT
finefocus-533	71	10	de	de	PROPN
finefocus-533	71	11	novo	novo	PROPN
finefocus-533	71	12	otu	otu	PROPN
finefocus-533	71	13	picking	pick	VERB
finefocus-533	71	14	at	at	ADP
finefocus-533	71	15	97	97	NUM
finefocus-533	71	16	%	%	NOUN
finefocus-533	71	17	identity	identity	NOUN
finefocus-533	71	18	,	,	PUNCT
finefocus-533	71	19	and	and	CCONJ
finefocus-533	71	20	removal	removal	NOUN
finefocus-533	71	21	of	of	ADP
finefocus-533	71	22	chimeras	chimeras	PROPN
finefocus-533	71	23	.	.	PUNCT
finefocus-533	72	1	a	a	DET
finefocus-533	72	2	combination	combination	NOUN
finefocus-533	72	3	of	of	ADP
finefocus-533	72	4	qiime	qiime	ADJ
finefocus-533	72	5	1.9.0	1.9.0	NUM
finefocus-533	72	6	and	and	CCONJ
finefocus-533	72	7	usearch	usearch	ADJ
finefocus-533	72	8	v7	v7	VERB
finefocus-533	72	9	scripts	script	NOUN
finefocus-533	72	10	were	be	AUX
finefocus-533	72	11	used	use	VERB
finefocus-533	72	12	to	to	PART
finefocus-533	72	13	generate	generate	VERB
finefocus-533	72	14	an	an	DET
finefocus-533	72	15	otu	otu	PROPN
finefocus-533	72	16	table	table	NOUN
finefocus-533	72	17	,	,	PUNCT
finefocus-533	72	18	assign	assign	VERB
finefocus-533	72	19	taxonomy	taxonomy	NOUN
finefocus-533	72	20	using	use	VERB
finefocus-533	72	21	the	the	DET
finefocus-533	72	22	greengenes	greengenes	PROPN
finefocus-533	72	23	reference	reference	NOUN
finefocus-533	72	24	database	database	NOUN
finefocus-533	72	25	(	(	PUNCT
finefocus-533	72	26	13_8	13_8	PROPN
finefocus-533	72	27	release	release	NOUN
finefocus-533	72	28	)	)	PUNCT
finefocus-533	72	29	clustered	cluster	VERB
finefocus-533	72	30	at	at	ADP
finefocus-533	72	31	97	97	NUM
finefocus-533	72	32	%	%	NOUN
finefocus-533	72	33	identity	identity	NOUN
finefocus-533	72	34	(	(	PUNCT
finefocus-533	72	35	11	11	NUM
finefocus-533	72	36	)	)	PUNCT
finefocus-533	72	37	,	,	PUNCT
finefocus-533	72	38	and	and	CCONJ
finefocus-533	72	39	to	to	PART
finefocus-533	72	40	generate	generate	VERB
finefocus-533	72	41	a	a	DET
finefocus-533	72	42	phylogenetic	phylogenetic	ADJ
finefocus-533	72	43	tree	tree	NOUN
finefocus-533	72	44	(	(	PUNCT
finefocus-533	72	45	7	7	NUM
finefocus-533	72	46	)	)	PUNCT
finefocus-533	72	47	.	.	PUNCT
finefocus-533	73	1	the	the	DET
finefocus-533	73	2	pipeline	pipeline	NOUN
finefocus-533	73	3	output	output	NOUN
finefocus-533	73	4	files	file	NOUN
finefocus-533	73	5	were	be	AUX
finefocus-533	73	6	further	far	ADV
finefocus-533	73	7	analyzed	analyze	VERB
finefocus-533	73	8	using	use	VERB
finefocus-533	73	9	qiime	qiime	NOUN
finefocus-533	73	10	1.9.0	1.9.0	NUM
finefocus-533	73	11	via	via	ADP
finefocus-533	73	12	oracle	oracle	PROPN
finefocus-533	73	13	vm	vm	PROPN
finefocus-533	73	14	virtualbox	virtualbox	PROPN
finefocus-533	73	15	software	software	NOUN
finefocus-533	73	16	on	on	ADP
finefocus-533	73	17	a	a	DET
finefocus-533	73	18	pc	pc	NOUN
finefocus-533	73	19	for	for	ADP
finefocus-533	73	20	downstream	downstream	ADJ
finefocus-533	73	21	otu	otu	PROPN
finefocus-533	73	22	table	table	NOUN
finefocus-533	73	23	filtering	filtering	NOUN
finefocus-533	73	24	,	,	PUNCT
finefocus-533	73	25	diversity	diversity	NOUN
finefocus-533	73	26	analysis	analysis	NOUN
finefocus-533	73	27	,	,	PUNCT
finefocus-533	73	28	and	and	CCONJ
finefocus-533	73	29	multivariate	multivariate	VERB
finefocus-533	73	30	statistical	statistical	ADJ
finefocus-533	73	31	tests	test	NOUN
finefocus-533	73	32	.	.	PUNCT
finefocus-533	74	1	circos	circos	NOUN
finefocus-533	74	2	plots	plot	NOUN
finefocus-533	74	3	were	be	AUX
finefocus-533	74	4	generated	generate	VERB
finefocus-533	74	5	using	use	VERB
finefocus-533	74	6	a	a	DET
finefocus-533	74	7	css	css	NOUN
finefocus-533	74	8	normalized	normalize	VERB
finefocus-533	74	9	filtered	filter	VERB
finefocus-533	74	10	otu	otu	PROPN
finefocus-533	74	11	table	table	NOUN
finefocus-533	74	12	with	with	ADP
finefocus-533	74	13	relative	relative	ADJ
finefocus-533	74	14	abundance	abundance	NOUN
finefocus-533	74	15	values	value	NOUN
finefocus-533	74	16	transformed	transform	VERB
finefocus-533	74	17	into	into	ADP
finefocus-533	74	18	integers	integer	NOUN
finefocus-533	74	19	by	by	ADP
finefocus-533	74	20	multiplying	multiply	VERB
finefocus-533	74	21	values	value	NOUN
finefocus-533	74	22	by	by	ADP
finefocus-533	74	23	10,000	10,000	NUM
finefocus-533	74	24	and	and	CCONJ
finefocus-533	74	25	rounding	round	VERB
finefocus-533	74	26	up	up	ADP
finefocus-533	74	27	to	to	ADP
finefocus-533	74	28	the	the	DET
finefocus-533	74	29	nearest	near	ADJ
finefocus-533	74	30	whole	whole	ADJ
finefocus-533	74	31	value	value	NOUN
finefocus-533	74	32	.	.	PUNCT
finefocus-533	75	1	relative	relative	ADJ
finefocus-533	75	2	abundance	abundance	NOUN
finefocus-533	75	3	values	value	NOUN
finefocus-533	75	4	for	for	ADP
finefocus-533	75	5	sample	sample	NOUN
finefocus-533	75	6	location	location	NOUN
finefocus-533	75	7	groups	group	NOUN
finefocus-533	75	8	were	be	AUX
finefocus-533	75	9	averaged	average	VERB
finefocus-533	75	10	and	and	CCONJ
finefocus-533	75	11	formatted	format	VERB
finefocus-533	75	12	for	for	ADP
finefocus-533	75	13	circos	circos	NOUN
finefocus-533	75	14	online	online	ADJ
finefocus-533	75	15	(	(	PUNCT
finefocus-533	75	16	26	26	NUM
finefocus-533	75	17	)	)	PUNCT
finefocus-533	75	18	.	.	PUNCT
finefocus-533	76	1	alpha	alpha	PROPN
finefocus-533	76	2	diversity	diversity	NOUN
finefocus-533	76	3	box	box	NOUN
finefocus-533	76	4	plots	plot	NOUN
finefocus-533	76	5	were	be	AUX
finefocus-533	76	6	generated	generate	VERB
finefocus-533	76	7	using	use	VERB
finefocus-533	76	8	boxplotr	boxplotr	NOUN
finefocus-533	76	9	,	,	PUNCT
finefocus-533	76	10	a	a	DET
finefocus-533	76	11	webbased	webbase	VERB
finefocus-533	76	12	tool	tool	NOUN
finefocus-533	76	13	running	run	VERB
finefocus-533	76	14	r	r	NOUN
finefocus-533	76	15	packages	package	NOUN
finefocus-533	76	16	on	on	ADP
finefocus-533	76	17	a	a	DET
finefocus-533	76	18	shiny	shiny	ADJ
finefocus-533	76	19	server	server	NOUN
finefocus-533	76	20	(	(	PUNCT
finefocus-533	76	21	40	40	NUM
finefocus-533	76	22	)	)	PUNCT
finefocus-533	76	23	.	.	PUNCT
finefocus-533	77	1	statistical	statistical	ADJ
finefocus-533	77	2	tests	test	NOUN
finefocus-533	77	3	all	all	DET
finefocus-533	77	4	statistical	statistical	ADJ
finefocus-533	77	5	tests	test	NOUN
finefocus-533	77	6	were	be	AUX
finefocus-533	77	7	performed	perform	VERB
finefocus-533	77	8	in	in	ADP
finefocus-533	77	9	qiime	qiime	NOUN
finefocus-533	77	10	.	.	PUNCT
finefocus-533	78	1	significance	significance	NOUN
finefocus-533	78	2	of	of	ADP
finefocus-533	78	3	alpha	alpha	NOUN
finefocus-533	78	4	diversity	diversity	NOUN
finefocus-533	78	5	between	between	ADP
finefocus-533	78	6	amd	amd	PROPN
finefocus-533	78	7	and	and	CCONJ
finefocus-533	78	8	ewc	ewc	PROPN
finefocus-533	78	9	samples	sample	NOUN
finefocus-533	78	10	was	be	AUX
finefocus-533	78	11	obtained	obtain	VERB
finefocus-533	78	12	via	via	ADP
finefocus-533	78	13	a	a	DET
finefocus-533	78	14	non	non	ADJ
finefocus-533	78	15	-	-	ADJ
finefocus-533	78	16	parametric	parametric	ADJ
finefocus-533	78	17	t	t	NOUN
finefocus-533	78	18	-	-	PUNCT
finefocus-533	78	19	test	test	NOUN
finefocus-533	78	20	using	use	VERB
finefocus-533	78	21	monte	monte	PROPN
finefocus-533	78	22	carlo	carlo	PROPN
finefocus-533	78	23	permutation	permutation	NOUN
finefocus-533	78	24	to	to	PART
finefocus-533	78	25	calculate	calculate	VERB
finefocus-533	78	26	the	the	DET
finefocus-533	78	27	p	p	NOUN
finefocus-533	78	28	-	-	PUNCT
finefocus-533	78	29	value	value	NOUN
finefocus-533	78	30	.	.	PUNCT
finefocus-533	79	1	a	a	DET
finefocus-533	79	2	beta	beta	NOUN
finefocus-533	79	3	diversity	diversity	NOUN
finefocus-533	79	4	non	non	ADJ
finefocus-533	79	5	-	-	ADJ
finefocus-533	79	6	parametric	parametric	ADJ
finefocus-533	79	7	multivariate	multivariate	NOUN
finefocus-533	79	8	statistical	statistical	ADJ
finefocus-533	79	9	test	test	NOUN
finefocus-533	79	10	was	be	AUX
finefocus-533	79	11	calculated	calculate	VERB
finefocus-533	79	12	with	with	ADP
finefocus-533	79	13	adonis	adonis	PROPN
finefocus-533	79	14	(	(	PUNCT
finefocus-533	79	15	modified	modify	VERB
finefocus-533	79	16	permanova	permanova	PROPN
finefocus-533	79	17	)	)	PUNCT
finefocus-533	79	18	.	.	PUNCT
finefocus-533	80	1	beta	beta	ADJ
finefocus-533	80	2	diversity	diversity	NOUN
finefocus-533	80	3	distance	distance	NOUN
finefocus-533	80	4	plot	plot	NOUN
finefocus-533	80	5	p	p	NOUN
finefocus-533	80	6	-	-	PUNCT
finefocus-533	80	7	values	value	NOUN
finefocus-533	80	8	were	be	AUX
finefocus-533	80	9	generated	generate	VERB
finefocus-533	80	10	using	use	VERB
finefocus-533	80	11	a	a	DET
finefocus-533	80	12	paired	pair	VERB
finefocus-533	80	13	bonferroni	bonferroni	NOUN
finefocus-533	80	14	-	-	PUNCT
finefocus-533	80	15	corrected	correct	VERB
finefocus-533	80	16	t	t	NOUN
finefocus-533	80	17	-	-	PUNCT
finefocus-533	80	18	test	test	NOUN
finefocus-533	80	19	.	.	PUNCT
finefocus-533	81	1	resulting	result	VERB
finefocus-533	81	2	p	p	NOUN
finefocus-533	81	3	-	-	PUNCT
finefocus-533	81	4	values	value	NOUN
finefocus-533	81	5	were	be	AUX
finefocus-533	81	6	adjusted	adjust	VERB
finefocus-533	81	7	via	via	ADP
finefocus-533	81	8	false	false	ADJ
finefocus-533	81	9	discovery	discovery	NOUN
finefocus-533	81	10	rate	rate	NOUN
finefocus-533	81	11	(	(	PUNCT
finefocus-533	81	12	fdr	fdr	PROPN
finefocus-533	81	13	)	)	PUNCT
finefocus-533	81	14	or	or	CCONJ
finefocus-533	81	15	bonferroni	bonferroni	NOUN
finefocus-533	81	16	method	method	NOUN
finefocus-533	81	17	for	for	ADP
finefocus-533	81	18	multiple	multiple	ADJ
finefocus-533	81	19	comparisons	comparison	NOUN
finefocus-533	81	20	as	as	SCONJ
finefocus-533	81	21	indicated	indicate	VERB
finefocus-533	81	22	in	in	ADP
finefocus-533	81	23	the	the	DET
finefocus-533	81	24	results	result	NOUN
finefocus-533	81	25	.	.	PUNCT
finefocus-533	82	1	differential	differential	ADJ
finefocus-533	82	2	abundance	abundance	NOUN
finefocus-533	82	3	analysis	analysis	NOUN
finefocus-533	82	4	was	be	AUX
finefocus-533	82	5	performed	perform	VERB
finefocus-533	82	6	using	use	VERB
finefocus-533	82	7	the	the	DET
finefocus-533	82	8	metagenomeseq	metagenomeseq	NOUN
finefocus-533	82	9	and	and	CCONJ
finefocus-533	82	10	deseq2	deseq2	PROPN
finefocus-533	82	11	package	package	NOUN
finefocus-533	82	12	via	via	ADP
finefocus-533	82	13	qiime	qiime	NOUN
finefocus-533	82	14	(	(	PUNCT
finefocus-533	82	15	34	34	NUM
finefocus-533	82	16	)	)	PUNCT
finefocus-533	82	17	.	.	PUNCT
finefocus-533	83	1	48•	48•	ADJ
finefocus-533	83	2	fine	fine	ADJ
finefocus-533	83	3	focus	focus	NOUN
finefocus-533	83	4	,	,	PUNCT
finefocus-533	83	5	vol	vol	NOUN
finefocus-533	83	6	.	.	PUNCT
finefocus-533	83	7	4(1	4(1	NOUN
finefocus-533	83	8	)	)	PUNCT
finefocus-533	83	9	environmental	environmental	ADJ
finefocus-533	83	10	parameters	parameter	NOUN
finefocus-533	83	11	of	of	ADP
finefocus-533	83	12	solomon	solomon	PROPN
finefocus-533	83	13	mine	mine	PROPN
finefocus-533	83	14	amd	amd	PROPN
finefocus-533	83	15	and	and	CCONJ
finefocus-533	83	16	east	east	PROPN
finefocus-533	83	17	willow	willow	PROPN
finefocus-533	83	18	creek	creek	PROPN
finefocus-533	83	19	water	water	NOUN
finefocus-533	83	20	-	-	PUNCT
finefocus-533	83	21	quality	quality	NOUN
finefocus-533	83	22	measurements	measurement	NOUN
finefocus-533	83	23	and	and	CCONJ
finefocus-533	83	24	sediment	sediment	NOUN
finefocus-533	83	25	samples	sample	NOUN
finefocus-533	83	26	were	be	AUX
finefocus-533	83	27	taken	take	VERB
finefocus-533	83	28	from	from	ADP
finefocus-533	83	29	the	the	DET
finefocus-533	83	30	solomon	solomon	PROPN
finefocus-533	83	31	mine	mine	PROPN
finefocus-533	83	32	site	site	NOUN
finefocus-533	83	33	and	and	CCONJ
finefocus-533	83	34	neighboring	neighboring	NOUN
finefocus-533	83	35	ewc	ewc	NOUN
finefocus-533	83	36	at	at	ADP
finefocus-533	83	37	selected	select	VERB
finefocus-533	83	38	wcrc	wcrc	ADJ
finefocus-533	83	39	water	water	NOUN
finefocus-533	83	40	-	-	PUNCT
finefocus-533	83	41	quality	quality	NOUN
finefocus-533	83	42	sampling	sampling	NOUN
finefocus-533	83	43	sites	site	NOUN
finefocus-533	83	44	,	,	PUNCT
finefocus-533	83	45	and	and	CCONJ
finefocus-533	83	46	from	from	ADP
finefocus-533	83	47	the	the	DET
finefocus-533	83	48	mine	mine	NOUN
finefocus-533	83	49	adit	adit	NOUN
finefocus-533	83	50	and	and	CCONJ
finefocus-533	83	51	constructed	construct	VERB
finefocus-533	83	52	wetland	wetland	NOUN
finefocus-533	83	53	cells	cell	NOUN
finefocus-533	83	54	(	(	PUNCT
finefocus-533	83	55	figure	figure	NOUN
finefocus-533	83	56	2	2	NUM
finefocus-533	83	57	)	)	PUNCT
finefocus-533	83	58	.	.	PUNCT
finefocus-533	84	1	amd	amd	PROPN
finefocus-533	84	2	water	water	NOUN
finefocus-533	84	3	and	and	CCONJ
finefocus-533	84	4	sediment	sediment	NOUN
finefocus-533	84	5	samples	sample	NOUN
finefocus-533	84	6	collected	collect	VERB
finefocus-533	84	7	from	from	ADP
finefocus-533	84	8	the	the	DET
finefocus-533	84	9	mine	mine	NOUN
finefocus-533	84	10	adit	adit	NOUN
finefocus-533	84	11	,	,	PUNCT
finefocus-533	84	12	wetland	wetland	NOUN
finefocus-533	84	13	cell	cell	NOUN
finefocus-533	84	14	1	1	NUM
finefocus-533	84	15	,	,	PUNCT
finefocus-533	84	16	and	and	CCONJ
finefocus-533	84	17	wetland	wetland	NOUN
finefocus-533	84	18	cell	cell	NOUN
finefocus-533	84	19	2	2	NUM
finefocus-533	84	20	were	be	AUX
finefocus-533	84	21	stained	stain	VERB
finefocus-533	84	22	with	with	ADP
finefocus-533	84	23	iron	iron	NOUN
finefocus-533	84	24	oxides	oxide	NOUN
finefocus-533	84	25	with	with	ADP
finefocus-533	84	26	no	no	DET
finefocus-533	84	27	obvious	obvious	ADJ
finefocus-533	84	28	biological	biological	ADJ
finefocus-533	84	29	organisms	organism	NOUN
finefocus-533	84	30	present	present	ADJ
finefocus-533	84	31	,	,	PUNCT
finefocus-533	84	32	while	while	SCONJ
finefocus-533	84	33	wetland	wetland	NOUN
finefocus-533	84	34	cell	cell	NOUN
finefocus-533	84	35	3	3	NUM
finefocus-533	84	36	exhibited	exhibit	VERB
finefocus-533	84	37	notable	notable	ADJ
finefocus-533	84	38	algal	algal	ADJ
finefocus-533	84	39	and	and	CCONJ
finefocus-533	84	40	aquatic	aquatic	ADJ
finefocus-533	84	41	plant	plant	NOUN
finefocus-533	84	42	growth	growth	NOUN
finefocus-533	84	43	(	(	PUNCT
finefocus-533	84	44	figure	figure	NOUN
finefocus-533	84	45	3	3	NUM
finefocus-533	84	46	)	)	PUNCT
finefocus-533	84	47	.	.	PUNCT
finefocus-533	85	1	generally	generally	ADV
finefocus-533	85	2	,	,	PUNCT
finefocus-533	85	3	an	an	DET
finefocus-533	85	4	increasing	increase	VERB
finefocus-533	85	5	ph	ph	ADJ
finefocus-533	85	6	gradient	gradient	NOUN
finefocus-533	85	7	was	be	AUX
finefocus-533	85	8	detected	detect	VERB
finefocus-533	85	9	from	from	ADP
finefocus-533	85	10	the	the	DET
finefocus-533	85	11	amd	amd	PROPN
finefocus-533	85	12	source	source	NOUN
finefocus-533	85	13	point	point	NOUN
finefocus-533	85	14	,	,	PUNCT
finefocus-533	85	15	through	through	ADP
finefocus-533	85	16	the	the	DET
finefocus-533	85	17	constructed	construct	VERB
finefocus-533	85	18	wetland	wetland	NOUN
finefocus-533	85	19	pond	pond	NOUN
finefocus-533	85	20	cells	cell	NOUN
finefocus-533	85	21	,	,	PUNCT
finefocus-533	85	22	and	and	CCONJ
finefocus-533	85	23	into	into	ADP
finefocus-533	85	24	ewc	ewc	PROPN
finefocus-533	85	25	(	(	PUNCT
finefocus-533	85	26	table	table	NOUN
finefocus-533	85	27	1	1	NUM
finefocus-533	85	28	)	)	PUNCT
finefocus-533	85	29	.	.	PUNCT
finefocus-533	86	1	additionally	additionally	ADV
finefocus-533	86	2	,	,	PUNCT
finefocus-533	86	3	an	an	DET
finefocus-533	86	4	increasing	increase	VERB
finefocus-533	86	5	gradient	gradient	NOUN
finefocus-533	86	6	of	of	ADP
finefocus-533	86	7	conductivity	conductivity	NOUN
finefocus-533	86	8	and	and	CCONJ
finefocus-533	86	9	oxidation/	oxidation/	NUM
finefocus-533	86	10	reduction	reduction	NOUN
finefocus-533	86	11	potential	potential	NOUN
finefocus-533	86	12	correlated	correlate	VERB
finefocus-533	86	13	with	with	ADP
finefocus-533	86	14	the	the	DET
finefocus-533	86	15	ph	ph	NOUN
finefocus-533	86	16	gradient	gradient	NOUN
finefocus-533	86	17	as	as	ADP
finefocus-533	86	18	amd	amd	PROPN
finefocus-533	86	19	moved	move	VERB
finefocus-533	86	20	via	via	ADP
finefocus-533	86	21	gravity	gravity	NOUN
finefocus-533	86	22	flow	flow	NOUN
finefocus-533	86	23	through	through	ADP
finefocus-533	86	24	the	the	DET
finefocus-533	86	25	constructed	construct	VERB
finefocus-533	86	26	wetlands	wetland	NOUN
finefocus-533	86	27	and	and	CCONJ
finefocus-533	86	28	into	into	ADP
finefocus-533	86	29	ewc	ewc	PROPN
finefocus-533	86	30	(	(	PUNCT
finefocus-533	86	31	table	table	NOUN
finefocus-533	86	32	1	1	NUM
finefocus-533	86	33	)	)	PUNCT
finefocus-533	86	34	.	.	PUNCT
finefocus-533	87	1	ewc	ewc	PROPN
finefocus-533	87	2	samples	sample	NOUN
finefocus-533	87	3	were	be	AUX
finefocus-533	87	4	within	within	ADP
finefocus-533	87	5	about	about	ADP
finefocus-533	87	6	a	a	DET
finefocus-533	87	7	half	half	ADJ
finefocus-533	87	8	ph	ph	NOUN
finefocus-533	87	9	unit	unit	NOUN
finefocus-533	87	10	of	of	ADP
finefocus-533	87	11	7	7	NUM
finefocus-533	87	12	and	and	CCONJ
finefocus-533	87	13	were	be	AUX
finefocus-533	87	14	2	2	NUM
finefocus-533	87	15	-	-	SYM
finefocus-533	87	16	3	3	NUM
finefocus-533	87	17	orders	order	NOUN
finefocus-533	87	18	of	of	ADP
finefocus-533	87	19	magnitude	magnitude	NOUN
finefocus-533	87	20	higher	high	ADJ
finefocus-533	87	21	than	than	ADP
finefocus-533	87	22	the	the	DET
finefocus-533	87	23	amd	amd	ADJ
finefocus-533	87	24	measurements	measurement	NOUN
finefocus-533	87	25	.	.	PUNCT
finefocus-533	88	1	additionally	additionally	ADV
finefocus-533	88	2	,	,	PUNCT
finefocus-533	88	3	conductivity	conductivity	NOUN
finefocus-533	88	4	and	and	CCONJ
finefocus-533	88	5	oxidation	oxidation	NOUN
finefocus-533	88	6	/	/	SYM
finefocus-533	88	7	reduction	reduction	NOUN
finefocus-533	88	8	potential	potential	ADJ
finefocus-533	88	9	measurements	measurement	NOUN
finefocus-533	88	10	in	in	ADP
finefocus-533	88	11	the	the	DET
finefocus-533	88	12	ewc	ewc	PROPN
finefocus-533	88	13	samples	sample	NOUN
finefocus-533	88	14	were	be	AUX
finefocus-533	88	15	markedly	markedly	ADV
finefocus-533	88	16	lower	low	ADJ
finefocus-533	88	17	than	than	ADP
finefocus-533	88	18	the	the	DET
finefocus-533	88	19	amd	amd	NOUN
finefocus-533	88	20	samples	sample	NOUN
finefocus-533	88	21	(	(	PUNCT
finefocus-533	88	22	table	table	NOUN
finefocus-533	88	23	1	1	NUM
finefocus-533	88	24	)	)	PUNCT
finefocus-533	88	25	in	in	ADP
finefocus-533	88	26	the	the	DET
finefocus-533	88	27	ewc	ewc	PROPN
finefocus-533	88	28	samples	sample	NOUN
finefocus-533	88	29	were	be	AUX
finefocus-533	88	30	markedly	markedly	ADV
finefocus-533	88	31	lower	low	ADJ
finefocus-533	88	32	than	than	ADP
finefocus-533	88	33	the	the	DET
finefocus-533	88	34	amd	amd	NOUN
finefocus-533	88	35	samples	sample	NOUN
finefocus-533	88	36	(	(	PUNCT
finefocus-533	88	37	table	table	NOUN
finefocus-533	88	38	1	1	NUM
finefocus-533	88	39	)	)	PUNCT
finefocus-533	88	40	.	.	PUNCT
finefocus-533	89	1	results	result	VERB
finefocus-533	89	2	49applied	49applied	NUM
finefocus-533	89	3	&	&	CCONJ
finefocus-533	89	4	environmental	environmental	ADJ
finefocus-533	89	5	microbiology	microbiology	NOUN
finefocus-533	89	6	•	•	PROPN
finefocus-533	89	7	*	*	PUNCT
finefocus-533	89	8	sample	sample	NOUN
finefocus-533	90	1	i	i	PROPN
finefocus-533	90	2	d	d	PROPN
finefocus-533	90	3	acronyms	acronyms	PROPN
finefocus-533	90	4	key	key	ADJ
finefocus-533	90	5	:	:	PUNCT
finefocus-533	90	6	east	east	PROPN
finefocus-533	90	7	willow	willow	PROPN
finefocus-533	90	8	creek	creek	PROPN
finefocus-533	90	9	site	site	NOUN
finefocus-533	90	10	a	a	DET
finefocus-533	90	11	(	(	PUNCT
finefocus-533	90	12	ew	ew	NOUN
finefocus-533	90	13	-	-	PUNCT
finefocus-533	90	14	a	a	NOUN
finefocus-533	90	15	)	)	PUNCT
finefocus-533	90	16	or	or	CCONJ
finefocus-533	90	17	site	site	NOUN
finefocus-533	90	18	g	g	PROPN
finefocus-533	90	19	(	(	PUNCT
finefocus-533	90	20	ew	ew	NOUN
finefocus-533	90	21	-	-	PUNCT
finefocus-533	90	22	g	g	NOUN
finefocus-533	90	23	)	)	PUNCT
finefocus-533	90	24	=	=	SYM
finefocus-533	90	25	wcrc	wcrc	ADJ
finefocus-533	90	26	sample	sample	NOUN
finefocus-533	90	27	site	site	NOUN
finefocus-533	90	28	a	a	PRON
finefocus-533	90	29	,	,	PUNCT
finefocus-533	90	30	g	g	NOUN
finefocus-533	90	31	,	,	PUNCT
finefocus-533	90	32	or	or	CCONJ
finefocus-533	90	33	immediately	immediately	ADV
finefocus-533	90	34	upstream	upstream	ADJ
finefocus-533	90	35	of	of	ADP
finefocus-533	90	36	solomon	solomon	PROPN
finefocus-533	90	37	mine	mine	PROPN
finefocus-533	90	38	(	(	PUNCT
finefocus-533	90	39	usm	usm	PROPN
finefocus-533	90	40	)	)	PUNCT
finefocus-533	90	41	;	;	PUNCT
finefocus-533	90	42	swd	swd	PROPN
finefocus-533	90	43	=	=	PROPN
finefocus-533	90	44	solomon	solomon	PROPN
finefocus-533	90	45	mine	mine	PROPN
finefocus-533	90	46	constructed	construct	VERB
finefocus-533	90	47	wetland	wetland	NOUN
finefocus-533	90	48	discharge	discharge	NOUN
finefocus-533	90	49	;	;	PUNCT
finefocus-533	90	50	sma	sma	PROPN
finefocus-533	90	51	=	=	PROPN
finefocus-533	90	52	solomon	solomon	PROPN
finefocus-533	90	53	mine	mine	PROPN
finefocus-533	90	54	adit	adit	NOUN
finefocus-533	90	55	just	just	ADV
finefocus-533	90	56	inside	inside	ADP
finefocus-533	90	57	the	the	DET
finefocus-533	90	58	bulkhead	bulkhead	NOUN
finefocus-533	90	59	;	;	PUNCT
finefocus-533	90	60	smt	smt	PROPN
finefocus-533	90	61	=	=	PUNCT
finefocus-533	90	62	inside	inside	ADP
finefocus-533	90	63	solomon	solomon	PROPN
finefocus-533	90	64	mine	mine	PROPN
finefocus-533	90	65	adit	adit	NOUN
finefocus-533	90	66	,	,	PUNCT
finefocus-533	90	67	~20	~20	NUM
finefocus-533	90	68	meters	meter	NOUN
finefocus-533	90	69	from	from	ADP
finefocus-533	90	70	bulkhead	bulkhead	NOUN
finefocus-533	90	71	.	.	PUNCT
finefocus-533	91	1	figure	figure	NOUN
finefocus-533	91	2	2	2	NUM
finefocus-533	91	3	.	.	PUNCT
finefocus-533	92	1	east	east	PROPN
finefocus-533	92	2	willow	willow	PROPN
finefocus-533	92	3	creek	creek	PROPN
finefocus-533	92	4	and	and	CCONJ
finefocus-533	92	5	solomon	solomon	PROPN
finefocus-533	92	6	mine	mine	PROPN
finefocus-533	92	7	acid	acid	PROPN
finefocus-533	92	8	mine	mine	NOUN
finefocus-533	92	9	drainage	drainage	NOUN
finefocus-533	92	10	(	(	PUNCT
finefocus-533	92	11	amd	amd	NOUN
finefocus-533	92	12	)	)	PUNCT
finefocus-533	92	13	sample	sample	NOUN
finefocus-533	92	14	locations	location	NOUN
finefocus-533	92	15	(	(	PUNCT
finefocus-533	92	16	red	red	ADJ
finefocus-533	92	17	circles	circle	NOUN
finefocus-533	92	18	)	)	PUNCT
finefocus-533	92	19	.	.	PUNCT
finefocus-533	93	1	(	(	PUNCT
finefocus-533	93	2	a	a	X
finefocus-533	93	3	)	)	PUNCT
finefocus-533	93	4	east	east	PROPN
finefocus-533	93	5	willow	willow	PROPN
finefocus-533	93	6	creek	creek	PROPN
finefocus-533	93	7	sample	sample	NOUN
finefocus-533	93	8	locations	location	NOUN
finefocus-533	93	9	immediately	immediately	ADV
finefocus-533	93	10	upstream	upstream	VERB
finefocus-533	93	11	(	(	PUNCT
finefocus-533	93	12	ew	ew	NOUN
finefocus-533	93	13	-	-	PUNCT
finefocus-533	93	14	usm	usm	NOUN
finefocus-533	93	15	)	)	PUNCT
finefocus-533	93	16	and	and	CCONJ
finefocus-533	93	17	downstream	downstream	ADJ
finefocus-533	93	18	(	(	PUNCT
finefocus-533	93	19	ew	ew	NOUN
finefocus-533	93	20	-	-	PUNCT
finefocus-533	93	21	g	g	NOUN
finefocus-533	93	22	)	)	PUNCT
finefocus-533	93	23	of	of	ADP
finefocus-533	93	24	the	the	DET
finefocus-533	93	25	solomon	solomon	PROPN
finefocus-533	93	26	mine	mine	PROPN
finefocus-533	93	27	and	and	CCONJ
finefocus-533	93	28	immediately	immediately	ADV
finefocus-533	93	29	upstream	upstream	ADJ
finefocus-533	93	30	of	of	ADP
finefocus-533	93	31	the	the	DET
finefocus-533	93	32	confluence	confluence	NOUN
finefocus-533	93	33	of	of	ADP
finefocus-533	93	34	east	east	PROPN
finefocus-533	93	35	and	and	CCONJ
finefocus-533	93	36	west	west	PROPN
finefocus-533	93	37	willow	willow	PROPN
finefocus-533	93	38	creek	creek	PROPN
finefocus-533	93	39	(	(	PUNCT
finefocus-533	93	40	ew	ew	NOUN
finefocus-533	93	41	-	-	PUNCT
finefocus-533	93	42	a	a	PRON
finefocus-533	93	43	)	)	PUNCT
finefocus-533	93	44	.	.	PUNCT
finefocus-533	94	1	(	(	PUNCT
finefocus-533	94	2	b	b	X
finefocus-533	94	3	)	)	PUNCT
finefocus-533	94	4	solomon	solomon	PROPN
finefocus-533	94	5	mine	mine	PROPN
finefocus-533	94	6	and	and	CCONJ
finefocus-533	94	7	constructed	construct	VERB
finefocus-533	94	8	wetlands	wetland	NOUN
finefocus-533	94	9	(	(	PUNCT
finefocus-533	94	10	outlined	outline	VERB
finefocus-533	94	11	region	region	NOUN
finefocus-533	94	12	in	in	ADP
finefocus-533	94	13	panel	panel	NOUN
finefocus-533	94	14	“	"	PUNCT
finefocus-533	94	15	a	a	PRON
finefocus-533	94	16	”	"	PUNCT
finefocus-533	94	17	)	)	PUNCT
finefocus-533	94	18	.	.	PUNCT
finefocus-533	95	1	smt	smt	PROPN
finefocus-533	95	2	(	(	PUNCT
finefocus-533	95	3	solomon	solomon	PROPN
finefocus-533	95	4	mine	mine	PROPN
finefocus-533	95	5	adit	adit	NOUN
finefocus-533	95	6	,	,	PUNCT
finefocus-533	95	7	~20	~20	NUM
finefocus-533	95	8	meters	meter	NOUN
finefocus-533	95	9	from	from	ADP
finefocus-533	95	10	the	the	DET
finefocus-533	95	11	bulkhead	bulkhead	NOUN
finefocus-533	95	12	)	)	PUNCT
finefocus-533	95	13	;	;	PUNCT
finefocus-533	95	14	sma	sma	PROPN
finefocus-533	95	15	(	(	PUNCT
finefocus-533	95	16	solomon	solomon	PROPN
finefocus-533	95	17	mine	mine	PROPN
finefocus-533	95	18	adit	adit	NOUN
finefocus-533	95	19	,	,	PUNCT
finefocus-533	95	20	just	just	ADV
finefocus-533	95	21	inside	inside	ADV
finefocus-533	95	22	and	and	CCONJ
finefocus-533	95	23	adjacent	adjacent	ADJ
finefocus-533	95	24	to	to	ADP
finefocus-533	95	25	the	the	DET
finefocus-533	95	26	bulkhead	bulkhead	NOUN
finefocus-533	95	27	)	)	PUNCT
finefocus-533	95	28	;	;	PUNCT
finefocus-533	95	29	smd	smd	X
finefocus-533	95	30	(	(	PUNCT
finefocus-533	95	31	solomon	solomon	PROPN
finefocus-533	95	32	mine	mine	PROPN
finefocus-533	95	33	wetland	wetland	ADV
finefocus-533	95	34	discharge	discharge	NOUN
finefocus-533	95	35	)	)	PUNCT
finefocus-533	95	36	.	.	PUNCT
finefocus-533	96	1	50•	50•	NUM
finefocus-533	96	2	fine	fine	ADJ
finefocus-533	96	3	focus	focus	NOUN
finefocus-533	96	4	,	,	PUNCT
finefocus-533	96	5	vol	vol	NOUN
finefocus-533	96	6	.	.	PUNCT
finefocus-533	96	7	4(1	4(1	NOUN
finefocus-533	96	8	)	)	PUNCT
finefocus-533	96	9	figure	figure	VERB
finefocus-533	96	10	3	3	NUM
finefocus-533	96	11	.	.	PUNCT
finefocus-533	96	12	acid	acid	NOUN
finefocus-533	96	13	mine	mine	ADJ
finefocus-533	96	14	drainage	drainage	NOUN
finefocus-533	96	15	(	(	PUNCT
finefocus-533	96	16	amd	amd	NOUN
finefocus-533	96	17	)	)	PUNCT
finefocus-533	96	18	sample	sample	NOUN
finefocus-533	96	19	location	location	NOUN
finefocus-533	96	20	images	image	NOUN
finefocus-533	96	21	.	.	PUNCT
finefocus-533	97	1	(	(	PUNCT
finefocus-533	97	2	a	a	X
finefocus-533	97	3	)	)	PUNCT
finefocus-533	97	4	overview	overview	NOUN
finefocus-533	97	5	photograph	photograph	NOUN
finefocus-533	97	6	of	of	ADP
finefocus-533	97	7	the	the	DET
finefocus-533	97	8	constructed	construct	VERB
finefocus-533	97	9	wetland	wetland	NOUN
finefocus-533	97	10	system	system	NOUN
finefocus-533	97	11	looking	look	VERB
finefocus-533	97	12	north	north	NOUN
finefocus-533	97	13	.	.	PUNCT
finefocus-533	98	1	portal	portal	PROPN
finefocus-533	98	2	of	of	ADP
finefocus-533	98	3	the	the	DET
finefocus-533	98	4	solomon	solomon	PROPN
finefocus-533	98	5	adit	adit	NOUN
finefocus-533	98	6	is	be	AUX
finefocus-533	98	7	in	in	ADP
finefocus-533	98	8	the	the	DET
finefocus-533	98	9	hillside	hillside	NOUN
finefocus-533	98	10	immediately	immediately	ADV
finefocus-533	98	11	beyond	beyond	ADP
finefocus-533	98	12	the	the	DET
finefocus-533	98	13	lower	low	ADJ
finefocus-533	98	14	left	left	ADJ
finefocus-533	98	15	side	side	NOUN
finefocus-533	98	16	of	of	ADP
finefocus-533	98	17	the	the	DET
finefocus-533	98	18	photograph	photograph	NOUN
finefocus-533	98	19	.	.	PUNCT
finefocus-533	99	1	water	water	NOUN
finefocus-533	99	2	draining	drain	VERB
finefocus-533	99	3	from	from	ADP
finefocus-533	99	4	the	the	DET
finefocus-533	99	5	solomon	solomon	PROPN
finefocus-533	99	6	adit	adit	PROPN
finefocus-533	99	7	flows	flow	NOUN
finefocus-533	99	8	into	into	ADP
finefocus-533	99	9	the	the	DET
finefocus-533	99	10	cells	cell	NOUN
finefocus-533	99	11	via	via	ADP
finefocus-533	99	12	a	a	DET
finefocus-533	99	13	buried	bury	VERB
finefocus-533	99	14	pipe	pipe	NOUN
finefocus-533	99	15	that	that	PRON
finefocus-533	99	16	extends	extend	VERB
finefocus-533	99	17	from	from	ADP
finefocus-533	99	18	the	the	DET
finefocus-533	99	19	portal	portal	NOUN
finefocus-533	99	20	to	to	ADP
finefocus-533	99	21	the	the	DET
finefocus-533	99	22	shutoff	shutoff	NOUN
finefocus-533	99	23	valve	valve	NOUN
finefocus-533	99	24	located	locate	VERB
finefocus-533	99	25	below	below	ADP
finefocus-533	99	26	ground	ground	NOUN
finefocus-533	99	27	in	in	ADP
finefocus-533	99	28	the	the	DET
finefocus-533	99	29	vertical	vertical	ADJ
finefocus-533	99	30	culvert	culvert	NOUN
finefocus-533	99	31	with	with	ADP
finefocus-533	99	32	metal	metal	NOUN
finefocus-533	99	33	lid	lid	NOUN
finefocus-533	99	34	(	(	PUNCT
finefocus-533	99	35	seen	see	VERB
finefocus-533	99	36	in	in	ADP
finefocus-533	99	37	the	the	DET
finefocus-533	99	38	photograph	photograph	NOUN
finefocus-533	99	39	above	above	ADP
finefocus-533	99	40	the	the	DET
finefocus-533	99	41	right	right	ADJ
finefocus-533	99	42	end	end	NOUN
finefocus-533	99	43	of	of	ADP
finefocus-533	99	44	the	the	DET
finefocus-533	99	45	pile	pile	NOUN
finefocus-533	99	46	of	of	ADP
finefocus-533	99	47	lumber	lumber	NOUN
finefocus-533	99	48	and	and	CCONJ
finefocus-533	99	49	timbers	timber	NOUN
finefocus-533	99	50	)	)	PUNCT
finefocus-533	99	51	.	.	PUNCT
finefocus-533	100	1	the	the	DET
finefocus-533	100	2	buried	bury	VERB
finefocus-533	100	3	pipe	pipe	NOUN
finefocus-533	100	4	then	then	ADV
finefocus-533	100	5	runs	run	VERB
finefocus-533	100	6	from	from	ADP
finefocus-533	100	7	the	the	DET
finefocus-533	100	8	shutoff	shutoff	NOUN
finefocus-533	100	9	valve	valve	NOUN
finefocus-533	100	10	into	into	ADP
finefocus-533	100	11	the	the	DET
finefocus-533	100	12	bottom	bottom	NOUN
finefocus-533	100	13	of	of	ADP
finefocus-533	100	14	cell	cell	NOUN
finefocus-533	100	15	1	1	NUM
finefocus-533	100	16	,	,	PUNCT
finefocus-533	100	17	where	where	SCONJ
finefocus-533	100	18	the	the	DET
finefocus-533	100	19	mine	mine	NOUN
finefocus-533	100	20	drainage	drainage	NOUN
finefocus-533	100	21	enters	enter	VERB
finefocus-533	100	22	the	the	DET
finefocus-533	100	23	wetland	wetland	NOUN
finefocus-533	100	24	system	system	NOUN
finefocus-533	100	25	.	.	PUNCT
finefocus-533	101	1	(	(	PUNCT
finefocus-533	101	2	b	b	X
finefocus-533	101	3	)	)	PUNCT
finefocus-533	101	4	inside	inside	ADP
finefocus-533	101	5	the	the	DET
finefocus-533	101	6	solomon	solomon	PROPN
finefocus-533	101	7	mine	mine	PROPN
finefocus-533	101	8	adit	adit	NOUN
finefocus-533	101	9	,	,	PUNCT
finefocus-533	101	10	~20	~20	NUM
finefocus-533	101	11	meters	meter	NOUN
finefocus-533	101	12	from	from	ADP
finefocus-533	101	13	the	the	DET
finefocus-533	101	14	bulkhead	bulkhead	NOUN
finefocus-533	101	15	.	.	PUNCT
finefocus-533	102	1	(	(	PUNCT
finefocus-533	102	2	c	c	X
finefocus-533	102	3	-	-	PUNCT
finefocus-533	102	4	e	e	NOUN
finefocus-533	102	5	)	)	PUNCT
finefocus-533	102	6	images	image	NOUN
finefocus-533	102	7	of	of	ADP
finefocus-533	102	8	the	the	DET
finefocus-533	102	9	constructed	construct	VERB
finefocus-533	102	10	wetland	wetland	NOUN
finefocus-533	102	11	cell	cell	NOUN
finefocus-533	102	12	1	1	NUM
finefocus-533	102	13	(	(	PUNCT
finefocus-533	102	14	c	c	NOUN
finefocus-533	102	15	)	)	PUNCT
finefocus-533	102	16	,	,	PUNCT
finefocus-533	102	17	cell	cell	NOUN
finefocus-533	102	18	2	2	NUM
finefocus-533	102	19	(	(	PUNCT
finefocus-533	102	20	d	d	NOUN
finefocus-533	102	21	)	)	PUNCT
finefocus-533	102	22	,	,	PUNCT
finefocus-533	102	23	and	and	CCONJ
finefocus-533	102	24	cell	cell	NOUN
finefocus-533	102	25	3	3	NUM
finefocus-533	102	26	(	(	PUNCT
finefocus-533	102	27	e	e	NOUN
finefocus-533	102	28	)	)	PUNCT
finefocus-533	102	29	prior	prior	ADV
finefocus-533	102	30	to	to	ADP
finefocus-533	102	31	sampling	sample	VERB
finefocus-533	102	32	.	.	PUNCT
finefocus-533	103	1	note	note	VERB
finefocus-533	103	2	the	the	DET
finefocus-533	103	3	iron	iron	NOUN
finefocus-533	103	4	-	-	PUNCT
finefocus-533	103	5	oxide	oxide	NOUN
finefocus-533	103	6	“	"	PUNCT
finefocus-533	103	7	yellow	yellow	ADJ
finefocus-533	103	8	boy	boy	NOUN
finefocus-533	103	9	”	"	PUNCT
finefocus-533	103	10	in	in	ADP
finefocus-533	103	11	cell	cell	NOUN
finefocus-533	103	12	1	1	NUM
finefocus-533	103	13	and	and	CCONJ
finefocus-533	103	14	-2	-2	INTJ
finefocus-533	103	15	(	(	PUNCT
finefocus-533	103	16	c	c	NOUN
finefocus-533	103	17	and	and	CCONJ
finefocus-533	103	18	d	d	NOUN
finefocus-533	103	19	respectively	respectively	ADV
finefocus-533	103	20	)	)	PUNCT
finefocus-533	103	21	,	,	PUNCT
finefocus-533	103	22	while	while	SCONJ
finefocus-533	103	23	cell	cell	NOUN
finefocus-533	103	24	3	3	NUM
finefocus-533	103	25	(	(	PUNCT
finefocus-533	103	26	e	e	NOUN
finefocus-533	103	27	)	)	PUNCT
finefocus-533	103	28	exhibited	exhibit	VERB
finefocus-533	103	29	noticeable	noticeable	ADJ
finefocus-533	103	30	aquatic	aquatic	ADJ
finefocus-533	103	31	plant	plant	NOUN
finefocus-533	103	32	and	and	CCONJ
finefocus-533	103	33	algal	algal	ADJ
finefocus-533	103	34	growth	growth	NOUN
finefocus-533	103	35	.	.	PUNCT
finefocus-533	104	1	51applied	51applied	NUM
finefocus-533	104	2	&	&	CCONJ
finefocus-533	104	3	environmental	environmental	ADJ
finefocus-533	104	4	microbiology	microbiology	NOUN
finefocus-533	104	5	•	•	CCONJ
finefocus-533	104	6	taxonomic	taxonomic	ADJ
finefocus-533	104	7	composition	composition	NOUN
finefocus-533	104	8	raw	raw	ADJ
finefocus-533	104	9	illumina	illumina	PROPN
finefocus-533	104	10	miseq	miseq	PROPN
finefocus-533	104	11	reads	read	NOUN
finefocus-533	104	12	were	be	AUX
finefocus-533	104	13	preprocessed	preprocesse	VERB
finefocus-533	104	14	to	to	PART
finefocus-533	104	15	merge	merge	VERB
finefocus-533	104	16	paired	pair	VERB
finefocus-533	104	17	-	-	PUNCT
finefocus-533	104	18	end	end	NOUN
finefocus-533	104	19	reads	read	NOUN
finefocus-533	104	20	,	,	PUNCT
finefocus-533	104	21	quality	quality	NOUN
finefocus-533	104	22	filter	filter	NOUN
finefocus-533	104	23	to	to	PART
finefocus-533	104	24	trim	trim	VERB
finefocus-533	104	25	or	or	CCONJ
finefocus-533	104	26	remove	remove	VERB
finefocus-533	104	27	low	low	ADJ
finefocus-533	104	28	quality	quality	NOUN
finefocus-533	104	29	reads	read	NOUN
finefocus-533	104	30	,	,	PUNCT
finefocus-533	104	31	add	add	VERB
finefocus-533	104	32	qiime	qiime	ADJ
finefocus-533	104	33	sample	sample	NOUN
finefocus-533	104	34	identifiers	identifier	NOUN
finefocus-533	104	35	,	,	PUNCT
finefocus-533	104	36	dereplicate	dereplicate	NOUN
finefocus-533	104	37	,	,	PUNCT
finefocus-533	104	38	cluster	cluster	NOUN
finefocus-533	104	39	into	into	ADP
finefocus-533	104	40	operational	operational	ADJ
finefocus-533	104	41	taxonomic	taxonomic	ADJ
finefocus-533	104	42	units	unit	NOUN
finefocus-533	104	43	(	(	PUNCT
finefocus-533	104	44	otus	otus	NOUN
finefocus-533	104	45	)	)	PUNCT
finefocus-533	104	46	,	,	PUNCT
finefocus-533	104	47	remove	remove	VERB
finefocus-533	104	48	chimeras	chimera	NOUN
finefocus-533	104	49	and	and	CCONJ
finefocus-533	104	50	a	a	DET
finefocus-533	104	51	demultiplexed	demultiplexed	ADJ
finefocus-533	104	52	sequences	sequence	NOUN
finefocus-533	104	53	are	be	AUX
finefocus-533	104	54	split	split	VERB
finefocus-533	104	55	across	across	ADP
finefocus-533	104	56	nine	nine	NUM
finefocus-533	104	57	sample	sample	NOUN
finefocus-533	104	58	locations	location	NOUN
finefocus-533	105	1	b	b	NOUN
finefocus-533	105	2	rarefaction	rarefaction	NOUN
finefocus-533	105	3	for	for	ADP
finefocus-533	105	4	the	the	DET
finefocus-533	105	5	chao1	chao1	NOUN
finefocus-533	105	6	alpha	alpha	NOUN
finefocus-533	105	7	diversity	diversity	NOUN
finefocus-533	105	8	metric	metric	ADJ
finefocus-533	105	9	utilized	utilize	VERB
finefocus-533	105	10	a	a	DET
finefocus-533	105	11	otu	otu	PROPN
finefocus-533	105	12	table	table	NOUN
finefocus-533	105	13	without	without	ADP
finefocus-533	105	14	singletons	singleton	NOUN
finefocus-533	105	15	removed	remove	VERB
finefocus-533	105	16	to	to	PART
finefocus-533	105	17	obtain	obtain	VERB
finefocus-533	105	18	a	a	DET
finefocus-533	105	19	visual	visual	ADJ
finefocus-533	105	20	representation	representation	NOUN
finefocus-533	105	21	of	of	ADP
finefocus-533	105	22	the	the	DET
finefocus-533	105	23	relative	relative	ADJ
finefocus-533	105	24	abundance	abundance	NOUN
finefocus-533	105	25	differences	difference	NOUN
finefocus-533	105	26	between	between	ADP
finefocus-533	105	27	the	the	DET
finefocus-533	105	28	nine	nine	NUM
finefocus-533	105	29	samples	sample	NOUN
finefocus-533	105	30	for	for	ADP
finefocus-533	105	31	the	the	DET
finefocus-533	105	32	3,832	3,832	NUM
finefocus-533	105	33	otus	otus	NOUN
finefocus-533	105	34	,	,	PUNCT
finefocus-533	105	35	a	a	DET
finefocus-533	105	36	logtransformed	logtransformed	ADJ
finefocus-533	105	37	heatmap	heatmap	NOUN
finefocus-533	105	38	was	be	AUX
finefocus-533	105	39	generated	generate	VERB
finefocus-533	105	40	with	with	ADP
finefocus-533	105	41	the	the	DET
finefocus-533	105	42	otus	otus	NOUN
finefocus-533	105	43	sorted	sort	VERB
finefocus-533	105	44	by	by	ADP
finefocus-533	105	45	phylogeny	phylogeny	NOUN
finefocus-533	105	46	along	along	ADP
finefocus-533	105	47	the	the	DET
finefocus-533	105	48	y	y	NOUN
finefocus-533	105	49	-	-	PUNCT
finefocus-533	105	50	axis	axis	NOUN
finefocus-533	105	51	(	(	PUNCT
finefocus-533	105	52	figure	figure	NOUN
finefocus-533	105	53	4	4	NUM
finefocus-533	105	54	)	)	PUNCT
finefocus-533	105	55	.	.	PUNCT
finefocus-533	106	1	the	the	DET
finefocus-533	106	2	visual	visual	ADJ
finefocus-533	106	3	otu	otu	PROPN
finefocus-533	106	4	relative	relative	PROPN
finefocus-533	106	5	abundance	abundance	PROPN
finefocus-533	106	6	for	for	ADP
finefocus-533	106	7	the	the	DET
finefocus-533	106	8	amd	amd	PROPN
finefocus-533	106	9	sample	sample	NOUN
finefocus-533	106	10	subgroup	subgroup	NOUN
finefocus-533	106	11	exhibited	exhibit	VERB
finefocus-533	106	12	a	a	DET
finefocus-533	106	13	relative	relative	ADJ
finefocus-533	106	14	low	low	ADJ
finefocus-533	106	15	abundance	abundance	NOUN
finefocus-533	106	16	of	of	ADP
finefocus-533	106	17	otus	otus	PROPN
finefocus-533	106	18	indicated	indicate	VERB
finefocus-533	106	19	by	by	ADP
finefocus-533	106	20	color	color	NOUN
finefocus-533	106	21	intensity	intensity	NOUN
finefocus-533	106	22	across	across	ADP
finefocus-533	106	23	the	the	DET
finefocus-533	106	24	set	set	NOUN
finefocus-533	106	25	of	of	ADP
finefocus-533	106	26	3,832	3,832	NUM
finefocus-533	106	27	otus	otus	NOUN
finefocus-533	106	28	compared	compare	VERB
finefocus-533	106	29	to	to	ADP
finefocus-533	106	30	the	the	DET
finefocus-533	106	31	ewc	ewc	PROPN
finefocus-533	106	32	sample	sample	NOUN
finefocus-533	106	33	subset	subset	NOUN
finefocus-533	106	34	.	.	PUNCT
finefocus-533	107	1	this	this	DET
finefocus-533	107	2	result	result	NOUN
finefocus-533	107	3	is	be	AUX
finefocus-533	107	4	indicative	indicative	ADJ
finefocus-533	107	5	of	of	ADP
finefocus-533	107	6	low	low	ADJ
finefocus-533	107	7	amd	amd	ADJ
finefocus-533	107	8	alpha	alpha	NOUN
finefocus-533	107	9	diversity	diversity	NOUN
finefocus-533	107	10	and	and	CCONJ
finefocus-533	107	11	more	more	ADV
finefocus-533	107	12	generally	generally	ADV
finefocus-533	107	13	of	of	ADP
finefocus-533	107	14	a	a	DET
finefocus-533	107	15	relatively	relatively	ADV
finefocus-533	107	16	different	different	ADJ
finefocus-533	107	17	phylotype	phylotype	NOUN
finefocus-533	107	18	composition	composition	NOUN
finefocus-533	107	19	between	between	ADP
finefocus-533	107	20	the	the	DET
finefocus-533	107	21	two	two	NUM
finefocus-533	107	22	environments	environment	NOUN
finefocus-533	107	23	.	.	PUNCT
finefocus-533	108	1	at	at	ADP
finefocus-533	108	2	the	the	DET
finefocus-533	108	3	phylum	phylum	NOUN
finefocus-533	108	4	level	level	NOUN
finefocus-533	108	5	,	,	PUNCT
finefocus-533	108	6	amd	amd	PROPN
finefocus-533	108	7	and	and	CCONJ
finefocus-533	108	8	ewc	ewc	PROPN
finefocus-533	108	9	subgroups	subgroup	NOUN
finefocus-533	108	10	exhibited	exhibit	VERB
finefocus-533	108	11	differential	differential	ADJ
finefocus-533	108	12	patterns	pattern	NOUN
finefocus-533	108	13	of	of	ADP
finefocus-533	108	14	relative	relative	ADJ
finefocus-533	108	15	abundance	abundance	NOUN
finefocus-533	108	16	of	of	ADP
finefocus-533	108	17	major	major	ADJ
finefocus-533	108	18	phyla	phyla	NOUN
finefocus-533	108	19	(	(	PUNCT
finefocus-533	108	20	phyla	phyla	NOUN
finefocus-533	108	21	with	with	ADP
finefocus-533	108	22	>	>	SYM
finefocus-533	108	23	2	2	NUM
finefocus-533	108	24	%	%	NOUN
finefocus-533	108	25	relative	relative	ADJ
finefocus-533	108	26	abundance	abundance	NOUN
finefocus-533	108	27	after	after	ADP
finefocus-533	108	28	css	css	PROPN
finefocus-533	108	29	normalization	normalization	PROPN
finefocus-533	108	30	)	)	PUNCT
finefocus-533	108	31	(	(	PUNCT
finefocus-533	108	32	figure	figure	NOUN
finefocus-533	108	33	5	5	NUM
finefocus-533	108	34	)	)	PUNCT
finefocus-533	108	35	.	.	PUNCT
finefocus-533	109	1	amd	amd	NOUN
finefocus-533	109	2	samples	sample	NOUN
finefocus-533	109	3	singletons	singleton	NOUN
finefocus-533	109	4	,	,	PUNCT
finefocus-533	109	5	and	and	CCONJ
finefocus-533	109	6	assign	assign	VERB
finefocus-533	109	7	otu	otu	PROPN
finefocus-533	109	8	taxonomy	taxonomy	NOUN
finefocus-533	109	9	(	(	PUNCT
finefocus-533	109	10	table	table	NOUN
finefocus-533	109	11	2	2	NUM
finefocus-533	109	12	)	)	PUNCT
finefocus-533	109	13	.	.	PUNCT
finefocus-533	110	1	across	across	ADP
finefocus-533	110	2	the	the	DET
finefocus-533	110	3	nine	nine	NUM
finefocus-533	110	4	samples	sample	NOUN
finefocus-533	110	5	,	,	PUNCT
finefocus-533	110	6	3,832	3,832	NUM
finefocus-533	110	7	otus	otus	NOUN
finefocus-533	110	8	were	be	AUX
finefocus-533	110	9	observed	observe	VERB
finefocus-533	110	10	in	in	ADP
finefocus-533	110	11	the	the	DET
finefocus-533	110	12	final	final	ADJ
finefocus-533	110	13	otu	otu	PROPN
finefocus-533	110	14	table	table	NOUN
finefocus-533	110	15	.	.	PUNCT
finefocus-533	111	1	depending	depend	VERB
finefocus-533	111	2	on	on	ADP
finefocus-533	111	3	the	the	DET
finefocus-533	111	4	specific	specific	ADJ
finefocus-533	111	5	downstream	downstream	ADJ
finefocus-533	111	6	analysis	analysis	NOUN
finefocus-533	111	7	,	,	PUNCT
finefocus-533	111	8	the	the	DET
finefocus-533	111	9	table	table	NOUN
finefocus-533	111	10	was	be	AUX
finefocus-533	111	11	either	either	CCONJ
finefocus-533	111	12	rarefied	rarefied	ADJ
finefocus-533	111	13	or	or	CCONJ
finefocus-533	111	14	underwent	underwent	ADJ
finefocus-533	111	15	css	css	ADJ
finefocus-533	111	16	normalization	normalization	NOUN
finefocus-533	111	17	to	to	PART
finefocus-533	111	18	account	account	VERB
finefocus-533	111	19	for	for	ADP
finefocus-533	111	20	the	the	DET
finefocus-533	111	21	varying	vary	VERB
finefocus-533	111	22	read	read	NOUN
finefocus-533	111	23	count	count	NOUN
finefocus-533	111	24	depth	depth	NOUN
finefocus-533	111	25	across	across	ADP
finefocus-533	111	26	samples	sample	NOUN
finefocus-533	111	27	,	,	PUNCT
finefocus-533	111	28	which	which	PRON
finefocus-533	111	29	ranged	range	VERB
finefocus-533	111	30	from	from	ADP
finefocus-533	111	31	21,994	21,994	NUM
finefocus-533	111	32	-	-	SYM
finefocus-533	111	33	37,949	37,949	NUM
finefocus-533	111	34	reads/	reads/	NUM
finefocus-533	111	35	sample	sample	NOUN
finefocus-533	111	36	location	location	NOUN
finefocus-533	111	37	.	.	PUNCT
finefocus-533	112	1	52•	52•	NUM
finefocus-533	112	2	fine	fine	ADJ
finefocus-533	112	3	focus	focus	NOUN
finefocus-533	112	4	,	,	PUNCT
finefocus-533	112	5	vol	vol	NOUN
finefocus-533	112	6	.	.	PUNCT
finefocus-533	112	7	4(1	4(1	X
finefocus-533	112	8	)	)	PUNCT
finefocus-533	112	9	figure	figure	VERB
finefocus-533	112	10	4	4	NUM
finefocus-533	112	11	.	.	PUNCT
finefocus-533	112	12	relative	relative	ADJ
finefocus-533	112	13	abundance	abundance	NOUN
finefocus-533	112	14	heat	heat	NOUN
finefocus-533	112	15	map	map	NOUN
finefocus-533	112	16	of	of	ADP
finefocus-533	112	17	the	the	DET
finefocus-533	112	18	3,832	3,832	NUM
finefocus-533	112	19	usearch	usearch	ADJ
finefocus-533	112	20	clustered	clustered	ADJ
finefocus-533	112	21	taxa	taxa	NOUN
finefocus-533	112	22	.	.	PUNCT
finefocus-533	113	1	a	a	DET
finefocus-533	113	2	css	css	PROPN
finefocus-533	113	3	normalized	normalize	VERB
finefocus-533	113	4	relative	relative	ADJ
finefocus-533	113	5	abundance	abundance	PROPN
finefocus-533	113	6	otu	otu	PROPN
finefocus-533	113	7	table	table	NOUN
finefocus-533	113	8	was	be	AUX
finefocus-533	113	9	used	use	VERB
finefocus-533	113	10	to	to	PART
finefocus-533	113	11	plot	plot	VERB
finefocus-533	113	12	log	log	NOUN
finefocus-533	113	13	-	-	PUNCT
finefocus-533	113	14	transformed	transform	VERB
finefocus-533	113	15	relative	relative	ADJ
finefocus-533	113	16	abundance	abundance	NOUN
finefocus-533	113	17	intensity	intensity	NOUN
finefocus-533	113	18	for	for	ADP
finefocus-533	113	19	each	each	PRON
finefocus-533	113	20	of	of	ADP
finefocus-533	113	21	the	the	DET
finefocus-533	113	22	3,832	3,832	NUM
finefocus-533	113	23	clustered	clustered	ADJ
finefocus-533	113	24	otus	otus	NOUN
finefocus-533	113	25	for	for	ADP
finefocus-533	113	26	each	each	DET
finefocus-533	113	27	sample	sample	NOUN
finefocus-533	113	28	location	location	NOUN
finefocus-533	113	29	.	.	PUNCT
finefocus-533	114	1	note	note	VERB
finefocus-533	114	2	the	the	DET
finefocus-533	114	3	relative	relative	ADJ
finefocus-533	114	4	abundance	abundance	NOUN
finefocus-533	114	5	of	of	ADP
finefocus-533	114	6	otus	otus	NOUN
finefocus-533	114	7	in	in	ADP
finefocus-533	114	8	the	the	DET
finefocus-533	114	9	ewc	ewc	PROPN
finefocus-533	114	10	sample	sample	PROPN
finefocus-533	114	11	location	location	NOUN
finefocus-533	114	12	microbiomes	microbiomes	PROPN
finefocus-533	114	13	(	(	PUNCT
finefocus-533	114	14	ew	ew	NOUN
finefocus-533	114	15	-	-	PUNCT
finefocus-533	114	16	a	a	PRON
finefocus-533	114	17	,	,	PUNCT
finefocus-533	114	18	ewusm	ewusm	NOUN
finefocus-533	114	19	,	,	PUNCT
finefocus-533	114	20	&	&	CCONJ
finefocus-533	114	21	ew	ew	PROPN
finefocus-533	114	22	-	-	PUNCT
finefocus-533	114	23	g	g	NOUN
finefocus-533	114	24	)	)	PUNCT
finefocus-533	114	25	compared	compare	VERB
finefocus-533	114	26	to	to	ADP
finefocus-533	114	27	the	the	DET
finefocus-533	114	28	amd	amd	PROPN
finefocus-533	114	29	sample	sample	NOUN
finefocus-533	114	30	location	location	NOUN
finefocus-533	114	31	microbiomes	microbiomes	PROPN
finefocus-533	114	32	(	(	PUNCT
finefocus-533	114	33	cells	cell	NOUN
finefocus-533	114	34	1	1	NUM
finefocus-533	114	35	to	to	ADP
finefocus-533	114	36	3	3	NUM
finefocus-533	114	37	,	,	PUNCT
finefocus-533	114	38	smt	smt	PROPN
finefocus-533	114	39	,	,	PUNCT
finefocus-533	114	40	swd	swd	PROPN
finefocus-533	114	41	,	,	PUNCT
finefocus-533	114	42	&	&	CCONJ
finefocus-533	114	43	sma	sma	PROPN
finefocus-533	114	44	)	)	PUNCT
finefocus-533	114	45	.	.	PUNCT
finefocus-533	115	1	generally	generally	ADV
finefocus-533	115	2	exhibited	exhibit	VERB
finefocus-533	115	3	a	a	DET
finefocus-533	115	4	higher	high	ADJ
finefocus-533	115	5	relative	relative	ADJ
finefocus-533	115	6	abundance	abundance	NOUN
finefocus-533	115	7	of	of	ADP
finefocus-533	115	8	proteobacteria	proteobacteria	NOUN
finefocus-533	115	9	,	,	PUNCT
finefocus-533	115	10	actinobacteria	actinobacteria	NOUN
finefocus-533	115	11	,	,	PUNCT
finefocus-533	115	12	chloroflexi	chloroflexi	NOUN
finefocus-533	115	13	,	,	PUNCT
finefocus-533	115	14	and	and	CCONJ
finefocus-533	115	15	firmicutes	firmicute	VERB
finefocus-533	115	16	phyla	phyla	NOUN
finefocus-533	115	17	.	.	PUNCT
finefocus-533	116	1	the	the	DET
finefocus-533	116	2	ewc	ewc	PROPN
finefocus-533	116	3	subgroup	subgroup	PROPN
finefocus-533	116	4	generally	generally	ADV
finefocus-533	116	5	exhibited	exhibit	VERB
finefocus-533	116	6	a	a	DET
finefocus-533	116	7	higher	high	ADJ
finefocus-533	116	8	relative	relative	ADJ
finefocus-533	116	9	abundance	abundance	NOUN
finefocus-533	116	10	of	of	ADP
finefocus-533	116	11	bacteroidetes	bacteroidete	NOUN
finefocus-533	116	12	and	and	CCONJ
finefocus-533	116	13	verrucomicrobia	verrucomicrobia	NOUN
finefocus-533	116	14	phyla	phyla	NOUN
finefocus-533	116	15	.	.	PUNCT
finefocus-533	117	1	these	these	DET
finefocus-533	117	2	differences	difference	NOUN
finefocus-533	117	3	in	in	ADP
finefocus-533	117	4	the	the	DET
finefocus-533	117	5	relative	relative	ADJ
finefocus-533	117	6	abundance	abundance	NOUN
finefocus-533	117	7	of	of	ADP
finefocus-533	117	8	phyla	phylum	NOUN
finefocus-533	117	9	were	be	AUX
finefocus-533	117	10	also	also	ADV
finefocus-533	117	11	observed	observe	VERB
finefocus-533	117	12	to	to	PART
finefocus-533	117	13	drive	drive	VERB
finefocus-533	117	14	differences	difference	NOUN
finefocus-533	117	15	in	in	ADP
finefocus-533	117	16	beta	beta	ADJ
finefocus-533	117	17	diversity	diversity	NOUN
finefocus-533	117	18	between	between	ADP
finefocus-533	117	19	amd	amd	PROPN
finefocus-533	117	20	and	and	CCONJ
finefocus-533	117	21	ewc	ewc	PROPN
finefocus-533	117	22	sample	sample	NOUN
finefocus-533	117	23	location	location	NOUN
finefocus-533	117	24	groups	group	NOUN
finefocus-533	117	25	when	when	SCONJ
finefocus-533	117	26	visualized	visualize	VERB
finefocus-533	117	27	via	via	ADP
finefocus-533	117	28	3	3	NUM
finefocus-533	117	29	-	-	PUNCT
finefocus-533	117	30	d	d	NOUN
finefocus-533	117	31	pcoa	pcoa	NOUN
finefocus-533	117	32	biplots	biplot	NOUN
finefocus-533	117	33	(	(	PUNCT
finefocus-533	117	34	data	datum	NOUN
finefocus-533	117	35	not	not	PART
finefocus-533	117	36	shown	show	VERB
finefocus-533	117	37	)	)	PUNCT
finefocus-533	117	38	.	.	PUNCT
finefocus-533	118	1	differential	differential	PROPN
finefocus-533	118	2	abundance	abundance	NOUN
finefocus-533	118	3	analysis	analysis	NOUN
finefocus-533	118	4	was	be	AUX
finefocus-533	118	5	performed	perform	VERB
finefocus-533	118	6	on	on	ADP
finefocus-533	118	7	the	the	DET
finefocus-533	118	8	amd	amd	PROPN
finefocus-533	118	9	and	and	CCONJ
finefocus-533	118	10	ewc	ewc	PROPN
finefocus-533	118	11	subgroups	subgroup	NOUN
finefocus-533	118	12	to	to	PART
finefocus-533	118	13	identify	identify	VERB
finefocus-533	118	14	over	over	ADP
finefocus-533	118	15	/	/	SYM
finefocus-533	118	16	under	under	ADV
finefocus-533	118	17	-	-	PUNCT
finefocus-533	118	18	represented	represent	VERB
finefocus-533	118	19	taxa	taxa	NOUN
finefocus-533	118	20	between	between	ADP
finefocus-533	118	21	the	the	DET
finefocus-533	118	22	sample	sample	NOUN
finefocus-533	118	23	groups	group	NOUN
finefocus-533	118	24	.	.	PUNCT
finefocus-533	119	1	a	a	DET
finefocus-533	119	2	single	single	ADJ
finefocus-533	119	3	statistically	statistically	ADV
finefocus-533	119	4	significant	significant	ADJ
finefocus-533	119	5	otu	otu	PROPN
finefocus-533	119	6	(	(	PUNCT
finefocus-533	119	7	bonferroni	bonferroni	NOUN
finefocus-533	119	8	corrected	correct	VERB
finefocus-533	119	9	;	;	PUNCT
finefocus-533	119	10	p=0.034	p=0.034	NUM
finefocus-533	119	11	)	)	PUNCT
finefocus-533	119	12	,	,	PUNCT
finefocus-533	119	13	acidobacteria-6	acidobacteria-6	PRON
finefocus-533	119	14	iii1	iii1	PROPN
finefocus-533	119	15	-	-	PUNCT
finefocus-533	119	16	15	15	NUM
finefocus-533	119	17	,	,	PUNCT
finefocus-533	119	18	which	which	PRON
finefocus-533	119	19	was	be	AUX
finefocus-533	119	20	identified	identify	VERB
finefocus-533	119	21	down	down	ADP
finefocus-533	119	22	to	to	ADP
finefocus-533	119	23	the	the	DET
finefocus-533	119	24	order	order	NOUN
finefocus-533	119	25	level	level	NOUN
finefocus-533	119	26	,	,	PUNCT
finefocus-533	119	27	was	be	AUX
finefocus-533	119	28	absent	absent	ADJ
finefocus-533	119	29	in	in	ADP
finefocus-533	119	30	amd	amd	ADJ
finefocus-533	119	31	samples	sample	NOUN
finefocus-533	119	32	,	,	PUNCT
finefocus-533	119	33	but	but	CCONJ
finefocus-533	119	34	present	present	ADJ
finefocus-533	119	35	at	at	ADP
finefocus-533	119	36	low	low	ADJ
finefocus-533	119	37	levels	level	NOUN
finefocus-533	119	38	in	in	ADP
finefocus-533	119	39	the	the	DET
finefocus-533	119	40	ewc	ewc	PROPN
finefocus-533	119	41	samples	sample	NOUN
finefocus-533	119	42	.	.	PUNCT
finefocus-533	120	1	although	although	SCONJ
finefocus-533	120	2	not	not	PART
finefocus-533	120	3	significant	significant	ADJ
finefocus-533	120	4	,	,	PUNCT
finefocus-533	120	5	the	the	DET
finefocus-533	120	6	bdellovibrio	bdellovibrio	NOUN
finefocus-533	120	7	and	and	CCONJ
finefocus-533	120	8	gallionella	gallionella	PROPN
finefocus-533	120	9	genera	genera	NOUN
finefocus-533	120	10	were	be	AUX
finefocus-533	120	11	notably	notably	ADV
finefocus-533	120	12	over	over	ADV
finefocus-533	120	13	-	-	PUNCT
finefocus-533	120	14	represented	represent	VERB
finefocus-533	120	15	in	in	ADP
finefocus-533	120	16	amd	amd	ADJ
finefocus-533	120	17	samples	sample	NOUN
finefocus-533	120	18	with	with	ADP
finefocus-533	120	19	gallionella	gallionella	NOUN
finefocus-533	120	20	more	more	ADV
finefocus-533	120	21	abundant	abundant	ADJ
finefocus-533	120	22	in	in	ADP
finefocus-533	120	23	the	the	DET
finefocus-533	120	24	solomon	solomon	PROPN
finefocus-533	120	25	mine	mine	PROPN
finefocus-533	120	26	adit	adit	PROPN
finefocus-533	120	27	sample	sample	NOUN
finefocus-533	120	28	locations	location	NOUN
finefocus-533	120	29	than	than	ADP
finefocus-533	120	30	within	within	ADP
finefocus-533	120	31	the	the	DET
finefocus-533	120	32	other	other	ADJ
finefocus-533	120	33	amd	amd	ADJ
finefocus-533	120	34	sampling	sample	VERB
finefocus-533	120	35	locations	location	NOUN
finefocus-533	120	36	.	.	PUNCT
finefocus-533	121	1	53applied	53applie	VERB
finefocus-533	121	2	&	&	CCONJ
finefocus-533	121	3	environmental	environmental	ADJ
finefocus-533	121	4	microbiology	microbiology	NOUN
finefocus-533	121	5	•	•	NOUN
finefocus-533	121	6	0	0	NUM
finefocus-533	121	7	%	%	NOUN
finefocus-533	121	8	10	10	NUM
finefocus-533	121	9	%	%	NOUN
finefocus-533	121	10	20	20	NUM
finefocus-533	121	11	%	%	NOUN
finefocus-533	121	12	30	30	NUM
finefocus-533	121	13	%	%	NOUN
finefocus-533	121	14	40	40	NUM
finefocus-533	121	15	%	%	NOUN
finefocus-533	121	16	50	50	NUM
finefocus-533	121	17	%	%	NOUN
finefocus-533	121	18	60	60	NUM
finefocus-533	121	19	%	%	NOUN
finefocus-533	121	20	70	70	NUM
finefocus-533	121	21	%	%	NOUN
finefocus-533	121	22	80	80	NUM
finefocus-533	121	23	%	%	NOUN
finefocus-533	121	24	90	90	NUM
finefocus-533	121	25	%	%	NOUN
finefocus-533	121	26	100	100	NUM
finefocus-533	121	27	%	%	NOUN
finefocus-533	121	28	smt	smt	PROPN
finefocus-533	121	29	sma	sma	PROPN
finefocus-533	121	30	cell	cell	NOUN
finefocus-533	121	31	1	1	NUM
finefocus-533	121	32	cell	cell	NOUN
finefocus-533	121	33	2	2	NUM
finefocus-533	121	34	cell	cell	NOUN
finefocus-533	121	35	3	3	NUM
finefocus-533	121	36	swd	swd	PROPN
finefocus-533	121	37	ew	ew	PROPN
finefocus-533	121	38	-	-	PUNCT
finefocus-533	121	39	a	a	DET
finefocus-533	121	40	ew	ew	NOUN
finefocus-533	121	41	-	-	PUNCT
finefocus-533	121	42	g	g	NOUN
finefocus-533	121	43	ew	ew	NOUN
finefocus-533	121	44	-	-	PUNCT
finefocus-533	121	45	usm	usm	ADJ
finefocus-533	121	46	cs	cs	PROPN
finefocus-533	121	47	s	s	PROPN
finefocus-533	121	48	n	n	ADJ
finefocus-533	121	49	or	or	CCONJ
finefocus-533	121	50	m	m	PROPN
finefocus-533	121	51	al	al	PROPN
finefocus-533	121	52	ize	ize	PROPN
finefocus-533	121	53	d	d	X
finefocus-533	121	54	re	re	X
finefocus-533	121	55	la	la	PROPN
finefocus-533	121	56	tiv	tiv	PROPN
finefocus-533	121	57	e	e	PROPN
finefocus-533	121	58	ab	ab	PROPN
finefocus-533	121	59	un	un	PROPN
finefocus-533	121	60	de	de	PROPN
finefocus-533	121	61	nc	nc	PROPN
finefocus-533	121	62	e	e	PROPN
finefocus-533	121	63	sample	sample	NOUN
finefocus-533	121	64	location	location	NOUN
finefocus-533	121	65	k__bacteria;p__proteobacteria	k__bacteria;p__proteobacteria	PROPN
finefocus-533	121	66	k__bacteria;p__bacteroidetes	k__bacteria;p__bacteroidetes	PROPN
finefocus-533	121	67	k__bacteria;p__planctomycetes	k__bacteria;p__planctomycete	VERB
finefocus-533	121	68	k__bacteria;p__actinobacteria	k__bacteria;p__actinobacteria	PROPN
finefocus-533	121	69	k__bacteria;p__chloroflexi	k__bacteria;p__chloroflexi	PROPN
finefocus-533	121	70	k__bacteria;p__verrucomicrobia	k__bacteria;p__verrucomicrobia	PROPN
finefocus-533	121	71	k__bacteria;p__acidobacteria	k__bacteria;p__acidobacteria	PROPN
finefocus-533	121	72	unassigned	unassigned	ADJ
finefocus-533	121	73	k__bacteria;p__firmicutes	k__bacteria;p__firmicute	NOUN
finefocus-533	121	74	k__bacteria;p__cyanobacteria	k__bacteria;p__cyanobacteria	PROPN
finefocus-533	121	75	k__bacteria;p__gemmatimonadetes	k__bacteria;p__gemmatimonadetes	PROPN
finefocus-533	121	76	k__bacteria;p__armatimonadetes	k__bacteria;p__armatimonadete	NOUN
finefocus-533	121	77	k__bacteria;p__wps-2	k__bacteria;p__wps-2	NOUN
finefocus-533	121	78	k__bacteria;p__chlorobi	k__bacteria;p__chlorobi	PROPN
finefocus-533	121	79	k__bacteria;p__spirochaetes	k__bacteria;p__spirochaete	NOUN
finefocus-533	121	80	rare	rare	ADJ
finefocus-533	121	81	taxa	taxa	NOUN
finefocus-533	121	82	(	(	PUNCT
finefocus-533	121	83	<	<	NOUN
finefocus-533	121	84	2	2	NUM
finefocus-533	121	85	%	%	NOUN
finefocus-533	121	86	)	)	PUNCT
finefocus-533	121	87	figure	figure	NOUN
finefocus-533	121	88	5	5	NUM
finefocus-533	121	89	.	.	PUNCT
finefocus-533	121	90	relative	relative	ADJ
finefocus-533	121	91	abundance	abundance	NOUN
finefocus-533	121	92	of	of	ADP
finefocus-533	121	93	bacterial	bacterial	ADJ
finefocus-533	121	94	phyla	phyla	NOUN
finefocus-533	121	95	by	by	ADP
finefocus-533	121	96	sample	sample	NOUN
finefocus-533	121	97	location	location	NOUN
finefocus-533	121	98	.	.	PUNCT
finefocus-533	122	1	a	a	DET
finefocus-533	122	2	css	css	PROPN
finefocus-533	122	3	normalized	normalize	VERB
finefocus-533	122	4	and	and	CCONJ
finefocus-533	122	5	singleton	singleton	PROPN
finefocus-533	122	6	filtered	filter	VERB
finefocus-533	122	7	otu	otu	PROPN
finefocus-533	122	8	table	table	NOUN
finefocus-533	122	9	was	be	AUX
finefocus-533	122	10	utilized	utilize	VERB
finefocus-533	122	11	to	to	PART
finefocus-533	122	12	show	show	VERB
finefocus-533	122	13	phyla	phyla	NOUN
finefocus-533	122	14	that	that	PRON
finefocus-533	122	15	make	make	VERB
finefocus-533	122	16	up	up	ADP
finefocus-533	122	17	>	>	SYM
finefocus-533	122	18	2	2	NUM
finefocus-533	122	19	%	%	NOUN
finefocus-533	122	20	relative	relative	ADJ
finefocus-533	122	21	abundance	abundance	NOUN
finefocus-533	122	22	in	in	ADP
finefocus-533	122	23	at	at	ADV
finefocus-533	122	24	least	least	ADJ
finefocus-533	122	25	one	one	NUM
finefocus-533	122	26	of	of	ADP
finefocus-533	122	27	the	the	DET
finefocus-533	122	28	sample	sample	NOUN
finefocus-533	122	29	locations	location	NOUN
finefocus-533	122	30	.	.	PUNCT
finefocus-533	123	1	amd	amd	PROPN
finefocus-533	123	2	sample	sample	NOUN
finefocus-533	123	3	group	group	NOUN
finefocus-533	123	4	:	:	PUNCT
finefocus-533	123	5	smt	smt	PROPN
finefocus-533	123	6	,	,	PUNCT
finefocus-533	123	7	sma	sma	PROPN
finefocus-533	123	8	,	,	PUNCT
finefocus-533	123	9	cell	cell	NOUN
finefocus-533	123	10	1	1	NUM
finefocus-533	123	11	,	,	PUNCT
finefocus-533	123	12	cell	cell	NOUN
finefocus-533	123	13	2	2	NUM
finefocus-533	123	14	,	,	PUNCT
finefocus-533	123	15	cell	cell	NOUN
finefocus-533	123	16	3	3	NUM
finefocus-533	123	17	,	,	PUNCT
finefocus-533	123	18	swd	swd	PROPN
finefocus-533	123	19	.	.	PUNCT
finefocus-533	124	1	ewc	ewc	PROPN
finefocus-533	124	2	sample	sample	PROPN
finefocus-533	124	3	group	group	NOUN
finefocus-533	124	4	:	:	PUNCT
finefocus-533	124	5	ew	ew	NOUN
finefocus-533	124	6	-	-	PUNCT
finefocus-533	124	7	a	a	PRON
finefocus-533	124	8	,	,	PUNCT
finefocus-533	124	9	ew	ew	NOUN
finefocus-533	124	10	-	-	PUNCT
finefocus-533	124	11	g	g	NOUN
finefocus-533	124	12	,	,	PUNCT
finefocus-533	124	13	ew	ew	NOUN
finefocus-533	124	14	-	-	PUNCT
finefocus-533	124	15	usm	usm	ADJ
finefocus-533	124	16	.	.	PUNCT
finefocus-533	125	1	diversity	diversity	NOUN
finefocus-533	125	2	analysis	analysis	NOUN
finefocus-533	125	3	the	the	DET
finefocus-533	125	4	amount	amount	NOUN
finefocus-533	125	5	of	of	ADP
finefocus-533	125	6	diversity	diversity	NOUN
finefocus-533	125	7	within	within	ADP
finefocus-533	125	8	each	each	DET
finefocus-533	125	9	sample	sample	NOUN
finefocus-533	125	10	site	site	NOUN
finefocus-533	125	11	was	be	AUX
finefocus-533	125	12	determined	determine	VERB
finefocus-533	125	13	using	use	VERB
finefocus-533	125	14	a	a	DET
finefocus-533	125	15	collection	collection	NOUN
finefocus-533	125	16	of	of	ADP
finefocus-533	125	17	alpha	alpha	NOUN
finefocus-533	125	18	diversity	diversity	NOUN
finefocus-533	125	19	metrics	metric	NOUN
finefocus-533	125	20	and	and	CCONJ
finefocus-533	125	21	indices	index	NOUN
finefocus-533	125	22	.	.	PUNCT
finefocus-533	126	1	multiple	multiple	ADJ
finefocus-533	126	2	rarefactions	rarefaction	NOUN
finefocus-533	126	3	were	be	AUX
finefocus-533	126	4	performed	perform	VERB
finefocus-533	126	5	to	to	PART
finefocus-533	126	6	normalize	normalize	VERB
finefocus-533	126	7	the	the	DET
finefocus-533	126	8	data	datum	NOUN
finefocus-533	126	9	set	set	VERB
finefocus-533	126	10	for	for	ADP
finefocus-533	126	11	alpha	alpha	NOUN
finefocus-533	126	12	diversity	diversity	NOUN
finefocus-533	126	13	analysis	analysis	NOUN
finefocus-533	126	14	and	and	CCONJ
finefocus-533	126	15	to	to	PART
finefocus-533	126	16	validate	validate	VERB
finefocus-533	126	17	that	that	SCONJ
finefocus-533	126	18	sequencing	sequencing	NOUN
finefocus-533	126	19	was	be	AUX
finefocus-533	126	20	done	do	VERB
finefocus-533	126	21	at	at	ADP
finefocus-533	126	22	an	an	DET
finefocus-533	126	23	adequate	adequate	ADJ
finefocus-533	126	24	depth	depth	NOUN
finefocus-533	126	25	for	for	ADP
finefocus-533	126	26	fair	fair	ADJ
finefocus-533	126	27	representation	representation	NOUN
finefocus-533	126	28	of	of	ADP
finefocus-533	126	29	the	the	DET
finefocus-533	126	30	microbial	microbial	ADJ
finefocus-533	126	31	community	community	NOUN
finefocus-533	126	32	.	.	PUNCT
finefocus-533	127	1	the	the	DET
finefocus-533	127	2	raw	raw	ADJ
finefocus-533	127	3	read	read	NOUN
finefocus-533	127	4	depth	depth	NOUN
finefocus-533	127	5	ranged	range	VERB
finefocus-533	127	6	from	from	ADP
finefocus-533	127	7	21,994	21,994	NUM
finefocus-533	127	8	-	-	SYM
finefocus-533	127	9	37,949	37,949	NUM
finefocus-533	127	10	reads	read	NOUN
finefocus-533	127	11	/	/	SYM
finefocus-533	127	12	sample	sample	NOUN
finefocus-533	127	13	,	,	PUNCT
finefocus-533	127	14	thus	thus	ADV
finefocus-533	127	15	the	the	DET
finefocus-533	127	16	otu	otu	PROPN
finefocus-533	127	17	table	table	NOUN
finefocus-533	127	18	was	be	AUX
finefocus-533	127	19	rarefied	rarefy	VERB
finefocus-533	127	20	without	without	ADP
finefocus-533	127	21	replacement	replacement	NOUN
finefocus-533	127	22	to	to	ADP
finefocus-533	127	23	a	a	DET
finefocus-533	127	24	depth	depth	NOUN
finefocus-533	127	25	of	of	ADP
finefocus-533	127	26	21,600	21,600	NUM
finefocus-533	127	27	.	.	PUNCT
finefocus-533	128	1	the	the	DET
finefocus-533	128	2	resulting	result	VERB
finefocus-533	128	3	rarefactions	rarefaction	NOUN
finefocus-533	128	4	were	be	AUX
finefocus-533	128	5	collated	collate	VERB
finefocus-533	128	6	and	and	CCONJ
finefocus-533	128	7	a	a	DET
finefocus-533	128	8	rarefaction	rarefaction	NOUN
finefocus-533	128	9	plot	plot	NOUN
finefocus-533	128	10	was	be	AUX
finefocus-533	128	11	generated	generate	VERB
finefocus-533	128	12	for	for	ADP
finefocus-533	128	13	the	the	DET
finefocus-533	128	14	sample	sample	NOUN
finefocus-533	128	15	locations	location	NOUN
finefocus-533	128	16	.	.	PUNCT
finefocus-533	129	1	the	the	DET
finefocus-533	129	2	resulting	result	VERB
finefocus-533	129	3	rarefaction	rarefaction	NOUN
finefocus-533	129	4	curves	curve	NOUN
finefocus-533	129	5	were	be	AUX
finefocus-533	129	6	indicative	indicative	ADJ
finefocus-533	129	7	of	of	ADP
finefocus-533	129	8	quality	quality	NOUN
finefocus-533	129	9	representative	representative	NOUN
finefocus-533	129	10	samples	sample	NOUN
finefocus-533	129	11	as	as	SCONJ
finefocus-533	129	12	the	the	DET
finefocus-533	129	13	curves	curve	NOUN
finefocus-533	129	14	were	be	AUX
finefocus-533	129	15	close	close	ADJ
finefocus-533	129	16	to	to	ADP
finefocus-533	129	17	reaching	reach	VERB
finefocus-533	129	18	the	the	DET
finefocus-533	129	19	asymptote	asymptote	NOUN
finefocus-533	129	20	(	(	PUNCT
finefocus-533	129	21	figure	figure	NOUN
finefocus-533	129	22	6	6	NUM
finefocus-533	129	23	)	)	PUNCT
finefocus-533	129	24	.	.	PUNCT
finefocus-533	130	1	observed	observe	VERB
finefocus-533	130	2	species	specie	NOUN
finefocus-533	130	3	(	(	PUNCT
finefocus-533	130	4	p=0.013	p=0.013	NOUN
finefocus-533	130	5	)	)	PUNCT
finefocus-533	130	6	,	,	PUNCT
finefocus-533	130	7	phylogenetic	phylogenetic	ADJ
finefocus-533	130	8	diversity	diversity	NOUN
finefocus-533	130	9	index	index	NOUN
finefocus-533	130	10	(	(	PUNCT
finefocus-533	130	11	p=0.021	p=0.021	NUM
finefocus-533	130	12	)	)	PUNCT
finefocus-533	130	13	,	,	PUNCT
finefocus-533	130	14	chao1	chao1	NOUN
finefocus-533	130	15	richness	richness	NOUN
finefocus-533	130	16	estimator	estimator	NOUN
finefocus-533	130	17	(	(	PUNCT
finefocus-533	130	18	p=0.006	p=0.006	NOUN
finefocus-533	130	19	)	)	PUNCT
finefocus-533	130	20	,	,	PUNCT
finefocus-533	130	21	and	and	CCONJ
finefocus-533	130	22	the	the	DET
finefocus-533	130	23	shannon	shannon	PROPN
finefocus-533	130	24	index	index	NOUN
finefocus-533	130	25	(	(	PUNCT
finefocus-533	130	26	p=0.039	p=0.039	NOUN
finefocus-533	130	27	)	)	PUNCT
finefocus-533	130	28	exhibited	exhibit	VERB
finefocus-533	130	29	54•	54•	NUM
finefocus-533	130	30	fine	fine	ADJ
finefocus-533	130	31	focus	focus	NOUN
finefocus-533	130	32	,	,	PUNCT
finefocus-533	130	33	vol	vol	NOUN
finefocus-533	130	34	.	.	PUNCT
finefocus-533	130	35	4(1	4(1	X
finefocus-533	130	36	)	)	PUNCT
finefocus-533	130	37	figure	figure	VERB
finefocus-533	130	38	7	7	NUM
finefocus-533	130	39	.	.	PUNCT
finefocus-533	130	40	alpha	alpha	NOUN
finefocus-533	130	41	diversity	diversity	NOUN
finefocus-533	130	42	metric	metric	PROPN
finefocus-533	130	43	box	box	NOUN
finefocus-533	130	44	plots	plot	NOUN
finefocus-533	130	45	.	.	PUNCT
finefocus-533	131	1	error	error	NOUN
finefocus-533	131	2	bars	bar	NOUN
finefocus-533	131	3	represent	represent	VERB
finefocus-533	131	4	+	+	NOUN
finefocus-533	131	5	/1.58*iqr/	/1.58*iqr/	NOUN
finefocus-533	131	6	sqrt(n	sqrt(n	PROPN
finefocus-533	131	7	)	)	PUNCT
finefocus-533	131	8	.	.	PUNCT
finefocus-533	132	1	an	an	DET
finefocus-533	132	2	unfiltered	unfiltered	ADJ
finefocus-533	132	3	otu	otu	PROPN
finefocus-533	132	4	table	table	NOUN
finefocus-533	132	5	was	be	AUX
finefocus-533	132	6	subsampled	subsample	VERB
finefocus-533	132	7	without	without	ADP
finefocus-533	132	8	replacement	replacement	NOUN
finefocus-533	132	9	for	for	ADP
finefocus-533	132	10	20	20	NUM
finefocus-533	132	11	iterations	iteration	NOUN
finefocus-533	132	12	using	use	VERB
finefocus-533	132	13	500	500	NUM
finefocus-533	132	14	sequence	sequence	NOUN
finefocus-533	132	15	steps	step	NOUN
finefocus-533	132	16	with	with	ADP
finefocus-533	132	17	a	a	DET
finefocus-533	132	18	maximum	maximum	NOUN
finefocus-533	132	19	of	of	ADP
finefocus-533	132	20	21,600	21,600	NUM
finefocus-533	132	21	sequences	sequence	NOUN
finefocus-533	132	22	.	.	PUNCT
finefocus-533	133	1	(	(	PUNCT
finefocus-533	133	2	a	a	X
finefocus-533	133	3	)	)	PUNCT
finefocus-533	133	4	chao1	chao1	NOUN
finefocus-533	133	5	estimator	estimator	NOUN
finefocus-533	133	6	using	use	VERB
finefocus-533	133	7	an	an	DET
finefocus-533	133	8	otu	otu	PROPN
finefocus-533	133	9	table	table	NOUN
finefocus-533	133	10	with	with	ADP
finefocus-533	133	11	the	the	DET
finefocus-533	133	12	presence	presence	NOUN
finefocus-533	133	13	of	of	ADP
finefocus-533	133	14	singletons	singleton	NOUN
finefocus-533	133	15	.	.	PUNCT
finefocus-533	134	1	(	(	PUNCT
finefocus-533	134	2	b	b	X
finefocus-533	134	3	)	)	PUNCT
finefocus-533	134	4	phylogenetic	phylogenetic	ADJ
finefocus-533	134	5	diversity	diversity	NOUN
finefocus-533	134	6	,	,	PUNCT
finefocus-533	134	7	(	(	PUNCT
finefocus-533	134	8	c	c	X
finefocus-533	134	9	)	)	PUNCT
finefocus-533	134	10	shannon	shannon	PROPN
finefocus-533	134	11	index	index	PROPN
finefocus-533	134	12	,	,	PUNCT
finefocus-533	134	13	(	(	PUNCT
finefocus-533	134	14	d	d	X
finefocus-533	134	15	)	)	PUNCT
finefocus-533	134	16	heips	heip	VERB
finefocus-533	134	17	evenness	evenness	ADJ
finefocus-533	134	18	index	index	NOUN
finefocus-533	134	19	.	.	PUNCT
finefocus-533	135	1	statistically	statistically	ADV
finefocus-533	135	2	significant	significant	ADJ
finefocus-533	135	3	differences	difference	NOUN
finefocus-533	135	4	in	in	ADP
finefocus-533	135	5	alpha	alpha	NOUN
finefocus-533	135	6	diversity	diversity	NOUN
finefocus-533	135	7	between	between	ADP
finefocus-533	135	8	amd	amd	PROPN
finefocus-533	135	9	and	and	CCONJ
finefocus-533	135	10	ewc	ewc	PROPN
finefocus-533	135	11	sample	sample	PROPN
finefocus-533	135	12	location	location	NOUN
finefocus-533	135	13	microbiomes	microbiomes	PROPN
finefocus-533	135	14	(	(	PUNCT
finefocus-533	135	15	figure	figure	NOUN
finefocus-533	135	16	7	7	NUM
finefocus-533	135	17	)	)	PUNCT
finefocus-533	135	18	.	.	PUNCT
finefocus-533	136	1	heips	heips	PROPN
finefocus-533	136	2	evenness	evenness	ADJ
finefocus-533	136	3	index	index	NOUN
finefocus-533	136	4	(	(	PUNCT
finefocus-533	136	5	p=0.123	p=0.123	NOUN
finefocus-533	136	6	)	)	PUNCT
finefocus-533	136	7	did	do	AUX
finefocus-533	136	8	not	not	PART
finefocus-533	136	9	indicate	indicate	VERB
finefocus-533	136	10	a	a	DET
finefocus-533	136	11	statistically	statistically	ADV
finefocus-533	136	12	significant	significant	ADJ
finefocus-533	136	13	difference	difference	NOUN
finefocus-533	136	14	between	between	ADP
finefocus-533	136	15	amd	amd	PROPN
finefocus-533	136	16	and	and	CCONJ
finefocus-533	136	17	ewc	ewc	PROPN
finefocus-533	136	18	suggesting	suggest	VERB
finefocus-533	136	19	that	that	SCONJ
finefocus-533	136	20	although	although	SCONJ
finefocus-533	136	21	there	there	PRON
finefocus-533	136	22	is	be	VERB
finefocus-533	136	23	a	a	DET
finefocus-533	136	24	marked	mark	VERB
finefocus-533	136	25	difference	difference	NOUN
finefocus-533	136	26	in	in	ADP
finefocus-533	136	27	species	specie	NOUN
finefocus-533	136	28	richness	richness	NOUN
finefocus-533	136	29	between	between	ADP
finefocus-533	136	30	amd	amd	PROPN
finefocus-533	136	31	and	and	CCONJ
finefocus-533	136	32	ewc	ewc	PROPN
finefocus-533	136	33	sample	sample	PROPN
finefocus-533	136	34	locations	location	NOUN
finefocus-533	136	35	,	,	PUNCT
finefocus-533	136	36	that	that	SCONJ
finefocus-533	136	37	a	a	DET
finefocus-533	136	38	portion	portion	NOUN
finefocus-533	136	39	of	of	ADP
finefocus-533	136	40	those	those	DET
finefocus-533	136	41	additional	additional	ADJ
finefocus-533	136	42	taxa	taxa	NOUN
finefocus-533	136	43	in	in	ADP
finefocus-533	136	44	ewc	ewc	PROPN
finefocus-533	136	45	may	may	AUX
finefocus-533	136	46	not	not	PART
finefocus-533	136	47	be	be	AUX
finefocus-533	136	48	as	as	ADV
finefocus-533	136	49	relatively	relatively	ADV
finefocus-533	136	50	abundant	abundant	ADJ
finefocus-533	136	51	.	.	PUNCT
finefocus-533	137	1	the	the	DET
finefocus-533	137	2	input	input	NOUN
finefocus-533	137	3	otu	otu	PROPN
finefocus-533	137	4	table	table	NOUN
finefocus-533	137	5	used	use	VERB
finefocus-533	137	6	for	for	ADP
finefocus-533	137	7	chao1	chao1	NOUN
finefocus-533	137	8	alpha	alpha	PROPN
finefocus-533	137	9	diversity	diversity	NOUN
finefocus-533	137	10	analysis	analysis	NOUN
finefocus-533	137	11	was	be	AUX
finefocus-533	137	12	not	not	PART
finefocus-533	137	13	filtered	filter	VERB
finefocus-533	137	14	for	for	ADP
finefocus-533	137	15	singletons	singleton	NOUN
finefocus-533	137	16	due	due	ADP
finefocus-533	137	17	to	to	ADP
finefocus-533	137	18	the	the	DET
finefocus-533	137	19	chao1	chao1	NOUN
finefocus-533	137	20	metric	metric	ADJ
finefocus-533	137	21	requirement	requirement	NOUN
finefocus-533	137	22	of	of	ADP
finefocus-533	137	23	needing	need	VERB
finefocus-533	137	24	to	to	PART
finefocus-533	137	25	take	take	VERB
finefocus-533	137	26	rare	rare	ADJ
finefocus-533	137	27	taxa	taxa	NOUN
finefocus-533	137	28	into	into	ADP
finefocus-533	137	29	figure	figure	NOUN
finefocus-533	137	30	6	6	NUM
finefocus-533	137	31	.	.	PUNCT
finefocus-533	138	1	chao1	chao1	NOUN
finefocus-533	138	2	rarefaction	rarefaction	NOUN
finefocus-533	138	3	curve	curve	NOUN
finefocus-533	138	4	for	for	ADP
finefocus-533	138	5	amd	amd	PROPN
finefocus-533	138	6	and	and	CCONJ
finefocus-533	138	7	ewc	ewc	PROPN
finefocus-533	138	8	samples	sample	NOUN
finefocus-533	138	9	.	.	PUNCT
finefocus-533	139	1	solomon	solomon	PROPN
finefocus-533	139	2	mine	mine	PROPN
finefocus-533	139	3	acid	acid	PROPN
finefocus-533	139	4	mine	mine	NOUN
finefocus-533	139	5	drainage	drainage	NOUN
finefocus-533	139	6	(	(	PUNCT
finefocus-533	139	7	amd	amd	X
finefocus-533	139	8	-red	-red	PUNCT
finefocus-533	139	9	)	)	PUNCT
finefocus-533	139	10	and	and	CCONJ
finefocus-533	139	11	east	east	PROPN
finefocus-533	139	12	willow	willow	PROPN
finefocus-533	139	13	creek	creek	PROPN
finefocus-533	139	14	(	(	PUNCT
finefocus-533	139	15	ewc	ewc	PROPN
finefocus-533	139	16	blue	blue	PROPN
finefocus-533	139	17	)	)	PUNCT
finefocus-533	139	18	.	.	PUNCT
finefocus-533	140	1	an	an	DET
finefocus-533	140	2	unfiltered	unfiltered	ADJ
finefocus-533	140	3	otu	otu	PROPN
finefocus-533	140	4	table	table	NOUN
finefocus-533	140	5	was	be	AUX
finefocus-533	140	6	subsampled	subsample	VERB
finefocus-533	140	7	without	without	ADP
finefocus-533	140	8	replacement	replacement	NOUN
finefocus-533	140	9	for	for	ADP
finefocus-533	140	10	20	20	NUM
finefocus-533	140	11	iterations	iteration	NOUN
finefocus-533	140	12	using	use	VERB
finefocus-533	140	13	500	500	NUM
finefocus-533	140	14	sequence	sequence	NOUN
finefocus-533	140	15	steps	step	NOUN
finefocus-533	140	16	with	with	ADP
finefocus-533	140	17	a	a	DET
finefocus-533	140	18	maximum	maximum	NOUN
finefocus-533	140	19	of	of	ADP
finefocus-533	140	20	21,600	21,600	NUM
finefocus-533	140	21	sequences	sequence	NOUN
finefocus-533	140	22	.	.	PUNCT
finefocus-533	141	1	chao1	chao1	PROPN
finefocus-533	141	2	alpha	alpha	PROPN
finefocus-533	141	3	diversity	diversity	NOUN
finefocus-533	141	4	was	be	AUX
finefocus-533	141	5	calculated	calculate	VERB
finefocus-533	141	6	on	on	ADP
finefocus-533	141	7	the	the	DET
finefocus-533	141	8	directory	directory	NOUN
finefocus-533	141	9	of	of	ADP
finefocus-533	141	10	rarified	rarified	ADJ
finefocus-533	141	11	tables	table	NOUN
finefocus-533	141	12	,	,	PUNCT
finefocus-533	141	13	and	and	CCONJ
finefocus-533	141	14	the	the	DET
finefocus-533	141	15	multiple	multiple	ADJ
finefocus-533	141	16	rarefactions	rarefaction	NOUN
finefocus-533	141	17	were	be	AUX
finefocus-533	141	18	collated	collate	VERB
finefocus-533	141	19	to	to	PART
finefocus-533	141	20	produce	produce	VERB
finefocus-533	141	21	the	the	DET
finefocus-533	141	22	plot	plot	NOUN
finefocus-533	141	23	.	.	PUNCT
finefocus-533	142	1	amd	amd	PROPN
finefocus-533	142	2	sample	sample	NOUN
finefocus-533	142	3	group	group	NOUN
finefocus-533	142	4	:	:	PUNCT
finefocus-533	142	5	smt	smt	PROPN
finefocus-533	142	6	,	,	PUNCT
finefocus-533	142	7	sma	sma	PROPN
finefocus-533	142	8	,	,	PUNCT
finefocus-533	142	9	cell	cell	NOUN
finefocus-533	142	10	1	1	NUM
finefocus-533	142	11	,	,	PUNCT
finefocus-533	142	12	cell	cell	NOUN
finefocus-533	142	13	2	2	NUM
finefocus-533	142	14	,	,	PUNCT
finefocus-533	142	15	cell	cell	NOUN
finefocus-533	142	16	3	3	NUM
finefocus-533	142	17	,	,	PUNCT
finefocus-533	142	18	swd	swd	PROPN
finefocus-533	142	19	.	.	PUNCT
finefocus-533	143	1	ewc	ewc	PROPN
finefocus-533	143	2	sample	sample	PROPN
finefocus-533	143	3	group	group	NOUN
finefocus-533	143	4	:	:	PUNCT
finefocus-533	143	5	ew	ew	NOUN
finefocus-533	143	6	-	-	PUNCT
finefocus-533	143	7	a	a	PRON
finefocus-533	143	8	,	,	PUNCT
finefocus-533	143	9	ew	ew	NOUN
finefocus-533	143	10	-	-	PUNCT
finefocus-533	143	11	g	g	NOUN
finefocus-533	143	12	,	,	PUNCT
finefocus-533	143	13	ew	ew	NOUN
finefocus-533	143	14	-	-	PUNCT
finefocus-533	143	15	usm	usm	NOUN
finefocus-533	143	16	.	.	PUNCT
finefocus-533	144	1	55applied	55applied	NUM
finefocus-533	144	2	&	&	CCONJ
finefocus-533	144	3	environmental	environmental	ADJ
finefocus-533	144	4	microbiology	microbiology	NOUN
finefocus-533	144	5	•	•	NOUN
finefocus-533	144	6	account	account	NOUN
finefocus-533	144	7	for	for	ADP
finefocus-533	144	8	modeling	modeling	NOUN
finefocus-533	144	9	.	.	PUNCT
finefocus-533	145	1	the	the	DET
finefocus-533	145	2	amount	amount	NOUN
finefocus-533	145	3	of	of	ADP
finefocus-533	145	4	diversity	diversity	NOUN
finefocus-533	145	5	between	between	ADP
finefocus-533	145	6	sample	sample	NOUN
finefocus-533	145	7	sites	site	NOUN
finefocus-533	145	8	was	be	AUX
finefocus-533	145	9	determined	determine	VERB
finefocus-533	145	10	through	through	ADP
finefocus-533	145	11	beta	beta	ADJ
finefocus-533	145	12	diversity	diversity	NOUN
finefocus-533	145	13	analysis	analysis	NOUN
finefocus-533	145	14	.	.	PUNCT
finefocus-533	146	1	the	the	DET
finefocus-533	146	2	original	original	ADJ
finefocus-533	146	3	otu	otu	PROPN
finefocus-533	146	4	table	table	NOUN
finefocus-533	146	5	was	be	AUX
finefocus-533	146	6	filtered	filter	VERB
finefocus-533	146	7	to	to	PART
finefocus-533	146	8	remove	remove	VERB
finefocus-533	146	9	singletons	singleton	NOUN
finefocus-533	146	10	and	and	CCONJ
finefocus-533	146	11	rare	rare	ADJ
finefocus-533	146	12	taxa	taxa	NOUN
finefocus-533	146	13	(	(	PUNCT
finefocus-533	146	14	<	<	NOUN
finefocus-533	146	15	0.005	0.005	NUM
finefocus-533	146	16	%	%	NOUN
finefocus-533	146	17	relative	relative	ADJ
finefocus-533	146	18	abundance	abundance	NOUN
finefocus-533	146	19	)	)	PUNCT
finefocus-533	146	20	that	that	PRON
finefocus-533	146	21	might	might	AUX
finefocus-533	146	22	inflate	inflate	VERB
finefocus-533	146	23	the	the	DET
finefocus-533	146	24	data	data	NOUN
finefocus-533	146	25	set	set	VERB
finefocus-533	146	26	(	(	PUNCT
finefocus-533	146	27	4	4	NUM
finefocus-533	146	28	)	)	PUNCT
finefocus-533	146	29	.	.	PUNCT
finefocus-533	147	1	to	to	PART
finefocus-533	147	2	account	account	VERB
finefocus-533	147	3	for	for	ADP
finefocus-533	147	4	sequencing	sequence	VERB
finefocus-533	147	5	depth	depth	NOUN
finefocus-533	147	6	,	,	PUNCT
finefocus-533	147	7	the	the	DET
finefocus-533	147	8	filtered	filter	VERB
finefocus-533	147	9	otu	otu	PROPN
finefocus-533	147	10	table	table	NOUN
finefocus-533	147	11	was	be	AUX
finefocus-533	147	12	normalized	normalize	VERB
finefocus-533	147	13	via	via	ADP
finefocus-533	147	14	cumulative	cumulative	ADJ
finefocus-533	147	15	sum	sum	NOUN
finefocus-533	147	16	scaling	scaling	NOUN
finefocus-533	147	17	(	(	PUNCT
finefocus-533	147	18	34	34	NUM
finefocus-533	147	19	)	)	PUNCT
finefocus-533	147	20	and	and	CCONJ
finefocus-533	147	21	used	use	VERB
finefocus-533	147	22	as	as	ADP
finefocus-533	147	23	an	an	DET
finefocus-533	147	24	input	input	NOUN
finefocus-533	147	25	for	for	ADP
finefocus-533	147	26	the	the	DET
finefocus-533	147	27	calculation	calculation	NOUN
finefocus-533	147	28	of	of	ADP
finefocus-533	147	29	a	a	DET
finefocus-533	147	30	weighted	weight	VERB
finefocus-533	147	31	unifrac	unifrac	ADJ
finefocus-533	147	32	distance	distance	NOUN
finefocus-533	147	33	metric	metric	ADJ
finefocus-533	147	34	(	(	PUNCT
finefocus-533	147	35	29	29	NUM
finefocus-533	147	36	)	)	PUNCT
finefocus-533	147	37	.	.	PUNCT
finefocus-533	148	1	this	this	DET
finefocus-533	148	2	data	data	NOUN
finefocus-533	148	3	reduction	reduction	NOUN
finefocus-533	148	4	step	step	NOUN
finefocus-533	148	5	was	be	AUX
finefocus-533	148	6	then	then	ADV
finefocus-533	148	7	visualized	visualize	VERB
finefocus-533	148	8	via	via	ADP
finefocus-533	148	9	a	a	DET
finefocus-533	148	10	principle	principle	ADJ
finefocus-533	148	11	coordinate	coordinate	NOUN
finefocus-533	148	12	analysis	analysis	NOUN
finefocus-533	148	13	(	(	PUNCT
finefocus-533	148	14	pcoa	pcoa	NOUN
finefocus-533	148	15	)	)	PUNCT
finefocus-533	148	16	plot	plot	NOUN
finefocus-533	148	17	along	along	ADP
finefocus-533	148	18	with	with	ADP
finefocus-533	148	19	the	the	DET
finefocus-533	148	20	principle	principle	ADJ
finefocus-533	148	21	coordinates	coordinate	NOUN
finefocus-533	148	22	summarized	summarize	VERB
finefocus-533	148	23	via	via	ADP
finefocus-533	148	24	a	a	DET
finefocus-533	148	25	scree	scree	ADJ
finefocus-533	148	26	plot	plot	NOUN
finefocus-533	148	27	.	.	PUNCT
finefocus-533	149	1	the	the	DET
finefocus-533	149	2	scree	scree	ADJ
finefocus-533	149	3	plot	plot	NOUN
finefocus-533	149	4	indicated	indicate	VERB
finefocus-533	149	5	that	that	SCONJ
finefocus-533	149	6	the	the	DET
finefocus-533	149	7	samples	sample	NOUN
finefocus-533	149	8	generated	generate	VERB
finefocus-533	149	9	100	100	NUM
finefocus-533	149	10	%	%	NOUN
finefocus-533	149	11	of	of	ADP
finefocus-533	149	12	the	the	DET
finefocus-533	149	13	variance	variance	NOUN
finefocus-533	149	14	within	within	ADP
finefocus-533	149	15	7	7	NUM
finefocus-533	149	16	dimensions	dimension	NOUN
finefocus-533	149	17	,	,	PUNCT
finefocus-533	149	18	with	with	ADP
finefocus-533	149	19	>	>	X
finefocus-533	149	20	86	86	NUM
finefocus-533	149	21	%	%	NOUN
finefocus-533	149	22	of	of	ADP
finefocus-533	149	23	the	the	DET
finefocus-533	149	24	variance	variance	NOUN
finefocus-533	149	25	observed	observe	VERB
finefocus-533	149	26	in	in	ADP
finefocus-533	149	27	the	the	DET
finefocus-533	149	28	first	first	ADJ
finefocus-533	149	29	3	3	NUM
finefocus-533	149	30	dimensions	dimension	NOUN
finefocus-533	149	31	(	(	PUNCT
finefocus-533	149	32	supplemental	supplemental	ADJ
finefocus-533	149	33	figure	figure	NOUN
finefocus-533	149	34	s1	s1	PROPN
finefocus-533	149	35	)	)	PUNCT
finefocus-533	149	36	.	.	PUNCT
finefocus-533	150	1	the	the	DET
finefocus-533	150	2	amd	amd	PROPN
finefocus-533	150	3	and	and	CCONJ
finefocus-533	150	4	the	the	DET
finefocus-533	150	5	ewc	ewc	PROPN
finefocus-533	150	6	sample	sample	PROPN
finefocus-533	150	7	microbiomes	microbiomes	PROPN
finefocus-533	150	8	clustered	cluster	VERB
finefocus-533	150	9	tightly	tightly	ADV
finefocus-533	150	10	in	in	ADP
finefocus-533	150	11	the	the	DET
finefocus-533	150	12	first	first	ADJ
finefocus-533	150	13	two	two	NUM
finefocus-533	150	14	dimensions	dimension	NOUN
finefocus-533	150	15	of	of	ADP
finefocus-533	150	16	the	the	DET
finefocus-533	150	17	pcoa	pcoa	NOUN
finefocus-533	150	18	plot	plot	NOUN
finefocus-533	150	19	,	,	PUNCT
finefocus-533	150	20	with	with	ADP
finefocus-533	150	21	the	the	DET
finefocus-533	150	22	exception	exception	NOUN
finefocus-533	150	23	being	be	AUX
finefocus-533	150	24	the	the	DET
finefocus-533	150	25	constructed	construct	VERB
finefocus-533	150	26	wetland	wetland	NOUN
finefocus-533	150	27	cell	cell	NOUN
finefocus-533	150	28	3	3	NUM
finefocus-533	150	29	which	which	PRON
finefocus-533	150	30	diverged	diverge	VERB
finefocus-533	150	31	from	from	ADP
finefocus-533	150	32	the	the	DET
finefocus-533	150	33	other	other	ADJ
finefocus-533	150	34	amd	amd	NOUN
finefocus-533	150	35	samples	sample	NOUN
finefocus-533	150	36	along	along	ADP
finefocus-533	150	37	the	the	DET
finefocus-533	150	38	second	second	ADJ
finefocus-533	150	39	principal	principal	ADJ
finefocus-533	150	40	coordinate	coordinate	NOUN
finefocus-533	150	41	(	(	PUNCT
finefocus-533	150	42	figure	figure	NOUN
finefocus-533	150	43	8)	8)	NUM
finefocus-533	150	44	.	.	PUNCT
finefocus-533	151	1	beta	beta	NOUN
finefocus-533	151	2	diversity	diversity	NOUN
finefocus-533	151	3	between	between	ADP
finefocus-533	151	4	sample	sample	NOUN
finefocus-533	151	5	location	location	NOUN
finefocus-533	151	6	microbiomes	microbiomes	PROPN
finefocus-533	151	7	exhibited	exhibit	VERB
finefocus-533	151	8	statistical	statistical	ADJ
finefocus-533	151	9	significance	significance	NOUN
finefocus-533	151	10	via	via	ADP
finefocus-533	151	11	the	the	DET
finefocus-533	151	12	adonis	adonis	PROPN
finefocus-533	151	13	permutational	permutational	ADJ
finefocus-533	151	14	multivariate	multivariate	NOUN
finefocus-533	151	15	analysis	analysis	NOUN
finefocus-533	151	16	of	of	ADP
finefocus-533	151	17	variance	variance	NOUN
finefocus-533	151	18	statistical	statistical	ADJ
finefocus-533	151	19	test	test	NOUN
finefocus-533	151	20	using	use	VERB
finefocus-533	151	21	the	the	DET
finefocus-533	151	22	three	three	NUM
finefocus-533	151	23	clustered	clustered	ADJ
finefocus-533	151	24	sample	sample	NOUN
finefocus-533	151	25	group	group	NOUN
finefocus-533	151	26	microbiomes	microbiomes	PROPN
finefocus-533	151	27	as	as	ADP
finefocus-533	151	28	an	an	DET
finefocus-533	151	29	input	input	NOUN
finefocus-533	151	30	(	(	PUNCT
finefocus-533	151	31	p<0.001	p<0.001	PROPN
finefocus-533	151	32	)	)	PUNCT
finefocus-533	151	33	.	.	PUNCT
finefocus-533	152	1	furthermore	furthermore	ADV
finefocus-533	152	2	,	,	PUNCT
finefocus-533	152	3	distance	distance	VERB
finefocus-533	152	4	comparison	comparison	NOUN
finefocus-533	152	5	boxplots	boxplot	NOUN
finefocus-533	152	6	representing	represent	VERB
finefocus-533	152	7	all	all	DET
finefocus-533	152	8	the	the	DET
finefocus-533	152	9	dimensions	dimension	NOUN
finefocus-533	152	10	of	of	ADP
finefocus-533	152	11	variance	variance	NOUN
finefocus-533	152	12	from	from	ADP
finefocus-533	152	13	the	the	DET
finefocus-533	152	14	distance	distance	NOUN
finefocus-533	152	15	matrix	matrix	NOUN
finefocus-533	152	16	indicated	indicate	VERB
finefocus-533	152	17	a	a	DET
finefocus-533	152	18	statistically	statistically	ADV
finefocus-533	152	19	significant	significant	ADJ
finefocus-533	152	20	difference	difference	NOUN
finefocus-533	152	21	when	when	SCONJ
finefocus-533	152	22	comparing	compare	VERB
finefocus-533	152	23	diversity	diversity	NOUN
finefocus-533	152	24	within	within	ADP
finefocus-533	152	25	and	and	CCONJ
finefocus-533	152	26	between	between	ADP
finefocus-533	152	27	the	the	DET
finefocus-533	152	28	three	three	NUM
finefocus-533	152	29	categories	category	NOUN
finefocus-533	152	30	(	(	PUNCT
finefocus-533	152	31	p<0.001	p<0.001	PROPN
finefocus-533	152	32	)	)	PUNCT
finefocus-533	152	33	(	(	PUNCT
finefocus-533	152	34	data	datum	NOUN
finefocus-533	152	35	not	not	PART
finefocus-533	152	36	shown	show	VERB
finefocus-533	152	37	)	)	PUNCT
finefocus-533	152	38	.	.	PUNCT
finefocus-533	153	1	supplemental	supplemental	ADJ
finefocus-533	153	2	figure	figure	NOUN
finefocus-533	153	3	s1	s1	PROPN
finefocus-533	153	4	.	.	PUNCT
finefocus-533	154	1	scree	scree	ADJ
finefocus-533	154	2	plot	plot	NOUN
finefocus-533	154	3	of	of	ADP
finefocus-533	154	4	principal	principal	ADJ
finefocus-533	154	5	coordinate	coordinate	NOUN
finefocus-533	154	6	analysis	analysis	NOUN
finefocus-533	154	7	.	.	PUNCT
finefocus-533	155	1	100	100	NUM
finefocus-533	155	2	%	%	NOUN
finefocus-533	155	3	of	of	ADP
finefocus-533	155	4	the	the	DET
finefocus-533	155	5	variance	variance	NOUN
finefocus-533	155	6	can	can	AUX
finefocus-533	155	7	be	be	AUX
finefocus-533	155	8	explained	explain	VERB
finefocus-533	155	9	within	within	ADP
finefocus-533	155	10	seven	seven	NUM
finefocus-533	155	11	coordinates	coordinate	NOUN
finefocus-533	155	12	.	.	PUNCT
finefocus-533	156	1	56•	56•	NUM
finefocus-533	156	2	fine	fine	ADJ
finefocus-533	156	3	focus	focus	NOUN
finefocus-533	156	4	,	,	PUNCT
finefocus-533	156	5	vol	vol	NOUN
finefocus-533	156	6	.	.	PUNCT
finefocus-533	156	7	4(1	4(1	NOUN
finefocus-533	156	8	)	)	PUNCT
finefocus-533	156	9	analysis	analysis	NOUN
finefocus-533	156	10	of	of	ADP
finefocus-533	156	11	the	the	DET
finefocus-533	156	12	major	major	ADJ
finefocus-533	156	13	taxa	taxa	NOUN
finefocus-533	156	14	and	and	CCONJ
finefocus-533	156	15	their	their	PRON
finefocus-533	156	16	relative	relative	ADJ
finefocus-533	156	17	abundance	abundance	NOUN
finefocus-533	156	18	driving	drive	VERB
finefocus-533	156	19	the	the	DET
finefocus-533	156	20	beta	beta	NOUN
finefocus-533	156	21	diversity	diversity	NOUN
finefocus-533	156	22	clustering	clustering	NOUN
finefocus-533	156	23	of	of	ADP
finefocus-533	156	24	the	the	DET
finefocus-533	156	25	samples	sample	NOUN
finefocus-533	156	26	was	be	AUX
finefocus-533	156	27	performed	perform	VERB
finefocus-533	156	28	via	via	ADP
finefocus-533	156	29	3	3	NUM
finefocus-533	156	30	-	-	PUNCT
finefocus-533	156	31	d	d	NOUN
finefocus-533	156	32	pcoa	pcoa	NOUN
finefocus-533	156	33	biplots	biplot	NOUN
finefocus-533	156	34	.	.	PUNCT
finefocus-533	157	1	this	this	DET
finefocus-533	157	2	data	datum	NOUN
finefocus-533	157	3	supports	support	VERB
finefocus-533	157	4	the	the	DET
finefocus-533	157	5	general	general	ADJ
finefocus-533	157	6	observed	observe	VERB
finefocus-533	157	7	differences	difference	NOUN
finefocus-533	157	8	in	in	ADP
finefocus-533	157	9	relative	relative	ADJ
finefocus-533	157	10	abundance	abundance	NOUN
finefocus-533	157	11	at	at	ADP
finefocus-533	157	12	the	the	DET
finefocus-533	157	13	phylum	phylum	NOUN
finefocus-533	157	14	level	level	NOUN
finefocus-533	157	15	.	.	PUNCT
finefocus-533	158	1	further	further	ADJ
finefocus-533	158	2	exploration	exploration	NOUN
finefocus-533	158	3	of	of	ADP
finefocus-533	158	4	pcoa	pcoa	NOUN
finefocus-533	158	5	biplots	biplot	NOUN
finefocus-533	158	6	down	down	ADP
finefocus-533	158	7	to	to	ADP
finefocus-533	158	8	the	the	DET
finefocus-533	158	9	family	family	NOUN
finefocus-533	158	10	level	level	NOUN
finefocus-533	158	11	,	,	PUNCT
finefocus-533	158	12	reveals	reveal	VERB
finefocus-533	158	13	major	major	ADJ
finefocus-533	158	14	taxa	taxa	NOUN
finefocus-533	158	15	in	in	ADP
finefocus-533	158	16	terms	term	NOUN
finefocus-533	158	17	of	of	ADP
finefocus-533	158	18	abundance	abundance	NOUN
finefocus-533	158	19	that	that	PRON
finefocus-533	158	20	drive	drive	VERB
finefocus-533	158	21	differences	difference	NOUN
finefocus-533	158	22	in	in	ADP
finefocus-533	158	23	microbial	microbial	ADJ
finefocus-533	158	24	community	community	NOUN
finefocus-533	158	25	composition	composition	NOUN
finefocus-533	158	26	between	between	ADP
finefocus-533	158	27	amd	amd	PROPN
finefocus-533	158	28	,	,	PUNCT
finefocus-533	158	29	ewc	ewc	PROPN
finefocus-533	158	30	,	,	PUNCT
finefocus-533	158	31	and	and	CCONJ
finefocus-533	158	32	constructed	construct	VERB
finefocus-533	158	33	wetland	wetland	NOUN
finefocus-533	158	34	cell	cell	NOUN
finefocus-533	158	35	3	3	NUM
finefocus-533	158	36	.	.	PUNCT
finefocus-533	158	37	amd	amd	PROPN
finefocus-533	158	38	sample	sample	NOUN
finefocus-533	158	39	locations	location	NOUN
finefocus-533	158	40	were	be	AUX
finefocus-533	158	41	associated	associate	VERB
finefocus-533	158	42	with	with	ADP
finefocus-533	158	43	the	the	DET
finefocus-533	158	44	relative	relative	ADJ
finefocus-533	158	45	abundance	abundance	NOUN
finefocus-533	158	46	of	of	ADP
finefocus-533	158	47	the	the	DET
finefocus-533	158	48	family	family	NOUN
finefocus-533	158	49	-	-	PUNCT
finefocus-533	158	50	level	level	NOUN
finefocus-533	158	51	taxa	taxa	NOUN
finefocus-533	158	52	acetobacteraceae	acetobacteraceae	ADV
finefocus-533	158	53	and	and	CCONJ
finefocus-533	158	54	rhodospirillaceae	rhodospirillaceae	VERB
finefocus-533	158	55	,	,	PUNCT
finefocus-533	158	56	which	which	PRON
finefocus-533	158	57	are	be	AUX
finefocus-533	158	58	both	both	PRON
finefocus-533	158	59	hierarchically	hierarchically	ADV
finefocus-533	158	60	placed	place	VERB
finefocus-533	158	61	within	within	ADP
finefocus-533	158	62	the	the	DET
finefocus-533	158	63	proteobacteria	proteobacteria	NOUN
finefocus-533	158	64	phylum	phylum	NOUN
finefocus-533	158	65	.	.	PUNCT
finefocus-533	159	1	constructed	construct	VERB
finefocus-533	159	2	wetland	wetland	NOUN
finefocus-533	159	3	cell	cell	NOUN
finefocus-533	159	4	3	3	NUM
finefocus-533	159	5	beta	beta	NOUN
finefocus-533	159	6	diversity	diversity	NOUN
finefocus-533	159	7	was	be	AUX
finefocus-533	159	8	driven	drive	VERB
finefocus-533	159	9	by	by	ADP
finefocus-533	159	10	the	the	DET
finefocus-533	159	11	phylum	phylum	NOUN
finefocus-533	159	12	chloroflexi	chloroflexi	PROPN
finefocus-533	159	13	and	and	CCONJ
finefocus-533	159	14	the	the	DET
finefocus-533	159	15	family	family	NOUN
finefocus-533	159	16	isophaeraceae	isophaeraceae	NOUN
finefocus-533	159	17	and	and	CCONJ
finefocus-533	159	18	a	a	DET
finefocus-533	159	19	group	group	NOUN
finefocus-533	159	20	of	of	ADP
finefocus-533	159	21	unassigned	unassigned	ADJ
finefocus-533	159	22	taxa	taxa	NOUN
finefocus-533	159	23	.	.	PUNCT
finefocus-533	160	1	lastly	lastly	ADV
finefocus-533	160	2	,	,	PUNCT
finefocus-533	160	3	the	the	DET
finefocus-533	160	4	planctomycete	planctomycete	PROPN
finefocus-533	160	5	phylum	phylum	PROPN
finefocus-533	160	6	family	family	NOUN
finefocus-533	160	7	member	member	NOUN
finefocus-533	160	8	germataceae	germataceae	PROPN
finefocus-533	160	9	and	and	CCONJ
finefocus-533	160	10	chitinophagaceae	chitinophagaceae	PROPN
finefocus-533	160	11	family	family	NOUN
finefocus-533	160	12	member	member	NOUN
finefocus-533	160	13	of	of	ADP
finefocus-533	160	14	the	the	DET
finefocus-533	160	15	bacteroidetes	bacteroidete	NOUN
finefocus-533	160	16	phylum	phylum	NOUN
finefocus-533	160	17	are	be	AUX
finefocus-533	160	18	particularly	particularly	ADV
finefocus-533	160	19	notable	notable	ADJ
finefocus-533	160	20	in	in	ADP
finefocus-533	160	21	driving	drive	VERB
finefocus-533	160	22	beta	beta	ADJ
finefocus-533	160	23	diversity	diversity	NOUN
finefocus-533	160	24	in	in	ADP
finefocus-533	160	25	ewc	ewc	PROPN
finefocus-533	160	26	samples	sample	NOUN
finefocus-533	160	27	(	(	PUNCT
finefocus-533	160	28	figure	figure	NOUN
finefocus-533	160	29	9	9	NUM
finefocus-533	160	30	)	)	PUNCT
finefocus-533	160	31	.	.	PUNCT
finefocus-533	161	1	figure	figure	VERB
finefocus-533	161	2	8	8	NUM
finefocus-533	161	3	.	.	PUNCT
finefocus-533	162	1	first	first	ADJ
finefocus-533	162	2	two	two	NUM
finefocus-533	162	3	principal	principal	ADJ
finefocus-533	162	4	coordinates	coordinate	NOUN
finefocus-533	162	5	of	of	ADP
finefocus-533	162	6	a	a	DET
finefocus-533	162	7	principle	principle	ADJ
finefocus-533	162	8	coordinate	coordinate	NOUN
finefocus-533	162	9	analysis	analysis	NOUN
finefocus-533	162	10	(	(	PUNCT
finefocus-533	162	11	pcoa	pcoa	NOUN
finefocus-533	162	12	)	)	PUNCT
finefocus-533	162	13	plot	plot	NOUN
finefocus-533	162	14	.	.	PUNCT
finefocus-533	163	1	solomon	solomon	PROPN
finefocus-533	163	2	mine	mine	PROPN
finefocus-533	163	3	acid	acid	PROPN
finefocus-533	163	4	mine	mine	NOUN
finefocus-533	163	5	drainage	drainage	NOUN
finefocus-533	163	6	(	(	PUNCT
finefocus-533	163	7	amd	amd	ADJ
finefocus-533	163	8	red	red	ADJ
finefocus-533	163	9	circles	circle	NOUN
finefocus-533	163	10	)	)	PUNCT
finefocus-533	163	11	,	,	PUNCT
finefocus-533	163	12	constructed	construct	VERB
finefocus-533	163	13	wetland	wetland	NOUN
finefocus-533	163	14	cell	cell	NOUN
finefocus-533	163	15	3	3	NUM
finefocus-533	163	16	acid	acid	NOUN
finefocus-533	163	17	mine	mine	NOUN
finefocus-533	163	18	drainage	drainage	NOUN
finefocus-533	163	19	(	(	PUNCT
finefocus-533	163	20	cell	cell	NOUN
finefocus-533	163	21	3	3	NUM
finefocus-533	163	22	blue	blue	PROPN
finefocus-533	163	23	box	box	NOUN
finefocus-533	163	24	)	)	PUNCT
finefocus-533	163	25	,	,	PUNCT
finefocus-533	163	26	east	east	PROPN
finefocus-533	163	27	willow	willow	PROPN
finefocus-533	163	28	creek	creek	PROPN
finefocus-533	163	29	(	(	PUNCT
finefocus-533	163	30	ewc	ewc	PROPN
finefocus-533	163	31	orange	orange	PROPN
finefocus-533	163	32	triangles	triangles	PROPN
finefocus-533	163	33	)	)	PUNCT
finefocus-533	163	34	.	.	PUNCT
finefocus-533	164	1	57applied	57applied	PROPN
finefocus-533	164	2	&	&	CCONJ
finefocus-533	164	3	environmental	environmental	ADJ
finefocus-533	164	4	microbiology	microbiology	NOUN
finefocus-533	164	5	•	•	NOUN
finefocus-533	164	6	figure	figure	NOUN
finefocus-533	164	7	9	9	NUM
finefocus-533	164	8	.	.	PUNCT
finefocus-533	164	9	circos	circos	PROPN
finefocus-533	164	10	plot	plot	NOUN
finefocus-533	164	11	of	of	ADP
finefocus-533	164	12	family	family	NOUN
finefocus-533	164	13	-	-	PUNCT
finefocus-533	164	14	level	level	NOUN
finefocus-533	164	15	taxa	taxa	NOUN
finefocus-533	164	16	driving	drive	VERB
finefocus-533	164	17	beta	beta	NOUN
finefocus-533	164	18	diversity	diversity	NOUN
finefocus-533	164	19	between	between	ADP
finefocus-533	164	20	amd	amd	NOUN
finefocus-533	164	21	,	,	PUNCT
finefocus-533	164	22	cell	cell	NOUN
finefocus-533	164	23	3	3	NUM
finefocus-533	164	24	,	,	PUNCT
finefocus-533	164	25	and	and	CCONJ
finefocus-533	164	26	ewc	ewc	NOUN
finefocus-533	164	27	sampling	sample	VERB
finefocus-533	164	28	locations	location	NOUN
finefocus-533	164	29	.	.	PUNCT
finefocus-533	165	1	each	each	DET
finefocus-533	165	2	family	family	NOUN
finefocus-533	165	3	-	-	PUNCT
finefocus-533	165	4	level	level	NOUN
finefocus-533	165	5	taxon	taxon	NOUN
finefocus-533	165	6	indicated	indicate	VERB
finefocus-533	165	7	on	on	ADP
finefocus-533	165	8	the	the	DET
finefocus-533	165	9	left	left	ADJ
finefocus-533	165	10	side	side	NOUN
finefocus-533	165	11	of	of	ADP
finefocus-533	165	12	the	the	DET
finefocus-533	165	13	plot	plot	NOUN
finefocus-533	165	14	is	be	AUX
finefocus-533	165	15	represented	represent	VERB
finefocus-533	165	16	with	with	ADP
finefocus-533	165	17	a	a	DET
finefocus-533	165	18	colored	colored	ADJ
finefocus-533	165	19	ribbon	ribbon	NOUN
finefocus-533	165	20	.	.	PUNCT
finefocus-533	166	1	the	the	DET
finefocus-533	166	2	width	width	NOUN
finefocus-533	166	3	of	of	ADP
finefocus-533	166	4	each	each	DET
finefocus-533	166	5	thread	thread	NOUN
finefocus-533	166	6	of	of	ADP
finefocus-533	166	7	the	the	DET
finefocus-533	166	8	split	split	NOUN
finefocus-533	166	9	ribbon	ribbon	NOUN
finefocus-533	166	10	directly	directly	ADV
finefocus-533	166	11	correlates	correlate	VERB
finefocus-533	166	12	with	with	ADP
finefocus-533	166	13	the	the	DET
finefocus-533	166	14	number	number	NOUN
finefocus-533	166	15	of	of	ADP
finefocus-533	166	16	normalized	normalize	VERB
finefocus-533	166	17	average	average	ADJ
finefocus-533	166	18	otu	otu	PROPN
finefocus-533	166	19	reads	read	NOUN
finefocus-533	166	20	associated	associate	VERB
finefocus-533	166	21	with	with	ADP
finefocus-533	166	22	the	the	DET
finefocus-533	166	23	respective	respective	ADJ
finefocus-533	166	24	sample	sample	NOUN
finefocus-533	166	25	location	location	NOUN
finefocus-533	166	26	that	that	PRON
finefocus-533	166	27	the	the	DET
finefocus-533	166	28	ribbon	ribbon	NOUN
finefocus-533	166	29	bridges	bridge	NOUN
finefocus-533	166	30	to	to	ADP
finefocus-533	166	31	on	on	ADP
finefocus-533	166	32	the	the	DET
finefocus-533	166	33	right	right	ADJ
finefocus-533	166	34	side	side	NOUN
finefocus-533	166	35	of	of	ADP
finefocus-533	166	36	the	the	DET
finefocus-533	166	37	figure	figure	NOUN
finefocus-533	166	38	.	.	PUNCT
finefocus-533	167	1	the	the	DET
finefocus-533	167	2	outer	outer	ADJ
finefocus-533	167	3	ring	ring	NOUN
finefocus-533	167	4	segments	segment	NOUN
finefocus-533	167	5	are	be	AUX
finefocus-533	167	6	color	color	NOUN
finefocus-533	167	7	coded	code	VERB
finefocus-533	167	8	along	along	ADP
finefocus-533	167	9	a	a	DET
finefocus-533	167	10	percentage	percentage	NOUN
finefocus-533	167	11	scale	scale	NOUN
finefocus-533	167	12	of	of	ADP
finefocus-533	167	13	total	total	ADJ
finefocus-533	167	14	reads	read	NOUN
finefocus-533	167	15	for	for	ADP
finefocus-533	167	16	the	the	DET
finefocus-533	167	17	family	family	NOUN
finefocus-533	167	18	member	member	NOUN
finefocus-533	167	19	that	that	PRON
finefocus-533	167	20	associate	associate	VERB
finefocus-533	167	21	with	with	ADP
finefocus-533	167	22	each	each	DET
finefocus-533	167	23	sample	sample	NOUN
finefocus-533	167	24	location	location	NOUN
finefocus-533	167	25	.	.	PUNCT
finefocus-533	168	1	css	css	PROPN
finefocus-533	168	2	normalized	normalize	VERB
finefocus-533	168	3	otu	otu	PROPN
finefocus-533	168	4	table	table	NOUN
finefocus-533	168	5	was	be	AUX
finefocus-533	168	6	positive	positive	ADJ
finefocus-533	168	7	filtered	filter	VERB
finefocus-533	168	8	for	for	ADP
finefocus-533	168	9	the	the	DET
finefocus-533	168	10	respective	respective	ADJ
finefocus-533	168	11	family	family	NOUN
finefocus-533	168	12	-	-	PUNCT
finefocus-533	168	13	level	level	NOUN
finefocus-533	168	14	taxa	taxa	NOUN
finefocus-533	168	15	.	.	PUNCT
finefocus-533	169	1	read	read	NOUN
finefocus-533	169	2	counts	count	NOUN
finefocus-533	169	3	were	be	AUX
finefocus-533	169	4	averaged	average	VERB
finefocus-533	169	5	for	for	ADP
finefocus-533	169	6	each	each	DET
finefocus-533	169	7	grouped	group	VERB
finefocus-533	169	8	microbiome	microbiome	NOUN
finefocus-533	169	9	.	.	PUNCT
finefocus-533	170	1	58•	58•	NUM
finefocus-533	170	2	fine	fine	ADJ
finefocus-533	170	3	focus	focus	NOUN
finefocus-533	170	4	,	,	PUNCT
finefocus-533	170	5	vol	vol	NOUN
finefocus-533	170	6	.	.	PUNCT
finefocus-533	170	7	4(1	4(1	NOUN
finefocus-533	170	8	)	)	PUNCT
finefocus-533	170	9	interestingly	interestingly	ADV
finefocus-533	170	10	,	,	PUNCT
finefocus-533	170	11	a	a	DET
finefocus-533	170	12	group	group	NOUN
finefocus-533	170	13	of	of	ADP
finefocus-533	170	14	unassigned	unassigned	ADJ
finefocus-533	170	15	otus	otus	NOUN
finefocus-533	170	16	was	be	AUX
finefocus-533	170	17	prominent	prominent	ADJ
finefocus-533	170	18	across	across	ADP
finefocus-533	170	19	all	all	DET
finefocus-533	170	20	the	the	DET
finefocus-533	170	21	sample	sample	NOUN
finefocus-533	170	22	locations	location	NOUN
finefocus-533	170	23	after	after	SCONJ
finefocus-533	170	24	taxonomy	taxonomy	NOUN
finefocus-533	170	25	was	be	AUX
finefocus-533	170	26	assigned	assign	VERB
finefocus-533	170	27	using	use	VERB
finefocus-533	170	28	the	the	DET
finefocus-533	170	29	greengenes	greengenes	PROPN
finefocus-533	170	30	reference	reference	NOUN
finefocus-533	170	31	database	database	NOUN
finefocus-533	170	32	.	.	PUNCT
finefocus-533	171	1	in	in	ADP
finefocus-533	171	2	the	the	DET
finefocus-533	171	3	3	3	NUM
finefocus-533	171	4	-	-	PUNCT
finefocus-533	171	5	d	d	NOUN
finefocus-533	171	6	beta	beta	ADJ
finefocus-533	171	7	diversity	diversity	NOUN
finefocus-533	171	8	biplots	biplot	NOUN
finefocus-533	171	9	,	,	PUNCT
finefocus-533	171	10	the	the	DET
finefocus-533	171	11	unassigned	unassigned	ADJ
finefocus-533	171	12	taxonomy	taxonomy	NOUN
finefocus-533	171	13	group	group	NOUN
finefocus-533	171	14	appears	appear	VERB
finefocus-533	171	15	to	to	PART
finefocus-533	171	16	be	be	AUX
finefocus-533	171	17	driving	drive	VERB
finefocus-533	171	18	beta	beta	ADJ
finefocus-533	171	19	diversity	diversity	NOUN
finefocus-533	171	20	in	in	ADP
finefocus-533	171	21	the	the	DET
finefocus-533	171	22	amd	amd	NOUN
finefocus-533	171	23	samples	sample	NOUN
finefocus-533	171	24	along	along	ADP
finefocus-533	171	25	principal	principal	ADJ
finefocus-533	171	26	coordinate	coordinate	NOUN
finefocus-533	171	27	1	1	NUM
finefocus-533	171	28	as	as	ADV
finefocus-533	171	29	well	well	ADV
finefocus-533	171	30	as	as	ADP
finefocus-533	171	31	forcing	force	VERB
finefocus-533	171	32	the	the	DET
finefocus-533	171	33	wetland	wetland	NOUN
finefocus-533	171	34	cell	cell	NOUN
finefocus-533	171	35	3	3	NUM
finefocus-533	171	36	sample	sample	NOUN
finefocus-533	171	37	location	location	NOUN
finefocus-533	171	38	to	to	PART
finefocus-533	171	39	diverge	diverge	VERB
finefocus-533	171	40	along	along	ADP
finefocus-533	171	41	principal	principal	ADJ
finefocus-533	171	42	coordinate	coordinate	NOUN
finefocus-533	171	43	2	2	NUM
finefocus-533	171	44	.	.	PUNCT
finefocus-533	171	45	to	to	PART
finefocus-533	171	46	further	far	ADV
finefocus-533	171	47	investigate	investigate	VERB
finefocus-533	171	48	this	this	DET
finefocus-533	171	49	group	group	NOUN
finefocus-533	171	50	,	,	PUNCT
finefocus-533	171	51	we	we	PRON
finefocus-533	171	52	tabulated	tabulate	VERB
finefocus-533	171	53	the	the	DET
finefocus-533	171	54	total	total	ADJ
finefocus-533	171	55	number	number	NOUN
finefocus-533	171	56	of	of	ADP
finefocus-533	171	57	normalized	normalize	VERB
finefocus-533	171	58	reads	read	NOUN
finefocus-533	171	59	across	across	ADP
finefocus-533	171	60	samples	sample	NOUN
finefocus-533	171	61	and	and	CCONJ
finefocus-533	171	62	sorted	sort	VERB
finefocus-533	171	63	the	the	DET
finefocus-533	171	64	unassigned	unassigned	ADJ
finefocus-533	171	65	otus	otus	NOUN
finefocus-533	171	66	by	by	ADP
finefocus-533	171	67	number	number	NOUN
finefocus-533	171	68	of	of	ADP
finefocus-533	171	69	reads	read	NOUN
finefocus-533	171	70	,	,	PUNCT
finefocus-533	171	71	followed	follow	VERB
finefocus-533	171	72	by	by	ADP
finefocus-533	171	73	sorting	sort	VERB
finefocus-533	171	74	the	the	DET
finefocus-533	171	75	top	top	ADJ
finefocus-533	171	76	unassigned	unassigned	ADJ
finefocus-533	171	77	otus	otus	NOUN
finefocus-533	171	78	with	with	ADP
finefocus-533	171	79	maximum	maximum	ADJ
finefocus-533	171	80	relative	relative	ADJ
finefocus-533	171	81	distribution	distribution	NOUN
finefocus-533	171	82	across	across	ADP
finefocus-533	171	83	all	all	DET
finefocus-533	171	84	samples	sample	NOUN
finefocus-533	171	85	.	.	PUNCT
finefocus-533	172	1	next	next	ADV
finefocus-533	172	2	,	,	PUNCT
finefocus-533	172	3	to	to	PART
finefocus-533	172	4	gain	gain	VERB
finefocus-533	172	5	insight	insight	NOUN
finefocus-533	172	6	into	into	ADP
finefocus-533	172	7	the	the	DET
finefocus-533	172	8	unassigned	unassigned	ADJ
finefocus-533	172	9	identities	identity	NOUN
finefocus-533	172	10	,	,	PUNCT
finefocus-533	172	11	alpha	alpha	NOUN
finefocus-533	172	12	diversity	diversity	NOUN
finefocus-533	172	13	analysis	analysis	NOUN
finefocus-533	172	14	indicates	indicate	VERB
finefocus-533	172	15	that	that	SCONJ
finefocus-533	172	16	the	the	DET
finefocus-533	172	17	diversity	diversity	NOUN
finefocus-533	172	18	within	within	ADP
finefocus-533	172	19	samples	sample	NOUN
finefocus-533	172	20	is	be	AUX
finefocus-533	172	21	relatively	relatively	ADV
finefocus-533	172	22	higher	high	ADJ
finefocus-533	172	23	for	for	ADP
finefocus-533	172	24	ewc	ewc	PROPN
finefocus-533	172	25	compared	compare	VERB
finefocus-533	172	26	to	to	ADP
finefocus-533	172	27	amd	amd	PROPN
finefocus-533	172	28	sample	sample	NOUN
finefocus-533	172	29	locations	location	NOUN
finefocus-533	172	30	,	,	PUNCT
finefocus-533	172	31	as	as	SCONJ
finefocus-533	172	32	is	be	AUX
finefocus-533	172	33	expected	expect	VERB
finefocus-533	172	34	considering	consider	VERB
finefocus-533	172	35	the	the	DET
finefocus-533	172	36	more	more	ADV
finefocus-533	172	37	challenging	challenging	ADJ
finefocus-533	172	38	physiological	physiological	ADJ
finefocus-533	172	39	conditions	condition	NOUN
finefocus-533	172	40	associated	associate	VERB
finefocus-533	172	41	with	with	ADP
finefocus-533	172	42	low	low	ADJ
finefocus-533	172	43	ph	ph	ADJ
finefocus-533	172	44	and	and	CCONJ
finefocus-533	172	45	higher	high	ADJ
finefocus-533	172	46	soluble	soluble	ADJ
finefocus-533	172	47	concentrations	concentration	NOUN
finefocus-533	172	48	of	of	ADP
finefocus-533	172	49	heavy	heavy	ADJ
finefocus-533	172	50	metals	metal	NOUN
finefocus-533	172	51	.	.	PUNCT
finefocus-533	173	1	the	the	DET
finefocus-533	173	2	lower	low	ADJ
finefocus-533	173	3	alpha	alpha	NOUN
finefocus-533	173	4	diversity	diversity	NOUN
finefocus-533	173	5	in	in	ADP
finefocus-533	173	6	amd	amd	NOUN
finefocus-533	173	7	samples	sample	NOUN
finefocus-533	173	8	is	be	AUX
finefocus-533	173	9	significantly	significantly	ADV
finefocus-533	173	10	supported	support	VERB
finefocus-533	173	11	beyond	beyond	ADP
finefocus-533	173	12	the	the	DET
finefocus-533	173	13	number	number	NOUN
finefocus-533	173	14	of	of	ADP
finefocus-533	173	15	otus	otus	NOUN
finefocus-533	173	16	by	by	ADP
finefocus-533	173	17	species	specie	NOUN
finefocus-533	173	18	estimators	estimator	NOUN
finefocus-533	173	19	and	and	CCONJ
finefocus-533	173	20	indices	index	NOUN
finefocus-533	173	21	that	that	PRON
finefocus-533	173	22	took	take	VERB
finefocus-533	173	23	species	specie	NOUN
finefocus-533	173	24	richness	richness	NOUN
finefocus-533	173	25	,	,	PUNCT
finefocus-533	173	26	evenness	evenness	NOUN
finefocus-533	173	27	,	,	PUNCT
finefocus-533	173	28	and/	and/	NOUN
finefocus-533	173	29	or	or	CCONJ
finefocus-533	173	30	evolutionary	evolutionary	ADJ
finefocus-533	173	31	distance	distance	NOUN
finefocus-533	173	32	into	into	ADP
finefocus-533	173	33	account	account	NOUN
finefocus-533	173	34	.	.	PUNCT
finefocus-533	174	1	for	for	ADP
finefocus-533	174	2	example	example	NOUN
finefocus-533	174	3	,	,	PUNCT
finefocus-533	174	4	the	the	DET
finefocus-533	174	5	chao1	chao1	NOUN
finefocus-533	174	6	species	species	PROPN
finefocus-533	174	7	richness	richness	NOUN
finefocus-533	174	8	estimator	estimator	NOUN
finefocus-533	174	9	attempts	attempt	VERB
finefocus-533	174	10	to	to	PART
finefocus-533	174	11	predict	predict	VERB
finefocus-533	174	12	species	species	NOUN
finefocus-533	174	13	saturation	saturation	NOUN
finefocus-533	174	14	at	at	ADP
finefocus-533	174	15	the	the	DET
finefocus-533	174	16	asymptote	asymptote	NOUN
finefocus-533	174	17	of	of	ADP
finefocus-533	174	18	the	the	DET
finefocus-533	174	19	species	species	NOUN
finefocus-533	174	20	accumulation	accumulation	NOUN
finefocus-533	174	21	curve	curve	NOUN
finefocus-533	174	22	by	by	ADP
finefocus-533	174	23	considering	consider	VERB
finefocus-533	174	24	the	the	DET
finefocus-533	174	25	number	number	NOUN
finefocus-533	174	26	of	of	ADP
finefocus-533	174	27	rare	rare	ADJ
finefocus-533	174	28	taxa	taxa	NOUN
finefocus-533	174	29	(	(	PUNCT
finefocus-533	174	30	9	9	NUM
finefocus-533	174	31	)	)	PUNCT
finefocus-533	174	32	.	.	PUNCT
finefocus-533	175	1	this	this	DET
finefocus-533	175	2	estimator	estimator	NOUN
finefocus-533	175	3	is	be	AUX
finefocus-533	175	4	thought	think	VERB
finefocus-533	175	5	to	to	PART
finefocus-533	175	6	provide	provide	VERB
finefocus-533	175	7	a	a	DET
finefocus-533	175	8	more	more	ADV
finefocus-533	175	9	realistic	realistic	ADJ
finefocus-533	175	10	picture	picture	NOUN
finefocus-533	175	11	than	than	ADP
finefocus-533	175	12	observed	observed	ADJ
finefocus-533	175	13	species	specie	NOUN
finefocus-533	175	14	alone	alone	ADV
finefocus-533	175	15	.	.	PUNCT
finefocus-533	176	1	the	the	DET
finefocus-533	176	2	shannon	shannon	PROPN
finefocus-533	176	3	index	index	NOUN
finefocus-533	176	4	takes	take	VERB
finefocus-533	176	5	into	into	ADP
finefocus-533	176	6	account	account	NOUN
finefocus-533	176	7	both	both	PRON
finefocus-533	176	8	we	we	PRON
finefocus-533	176	9	used	use	VERB
finefocus-533	176	10	the	the	DET
finefocus-533	176	11	reference	reference	NOUN
finefocus-533	176	12	sequence	sequence	NOUN
finefocus-533	176	13	for	for	ADP
finefocus-533	176	14	each	each	DET
finefocus-533	176	15	respective	respective	ADJ
finefocus-533	176	16	unassigned	unassigned	ADJ
finefocus-533	176	17	otu	otu	PROPN
finefocus-533	176	18	as	as	ADP
finefocus-533	176	19	an	an	DET
finefocus-533	176	20	input	input	NOUN
finefocus-533	176	21	for	for	ADP
finefocus-533	176	22	the	the	DET
finefocus-533	176	23	ribosome	ribosome	NOUN
finefocus-533	176	24	database	database	NOUN
finefocus-533	176	25	project	project	NOUN
finefocus-533	176	26	(	(	PUNCT
finefocus-533	176	27	rdp	rdp	ADJ
finefocus-533	176	28	)	)	PUNCT
finefocus-533	176	29	classifier	classifier	NOUN
finefocus-533	176	30	algorithm	algorithm	NOUN
finefocus-533	176	31	(	(	PUNCT
finefocus-533	176	32	44	44	NUM
finefocus-533	176	33	)	)	PUNCT
finefocus-533	176	34	.	.	PUNCT
finefocus-533	177	1	the	the	DET
finefocus-533	177	2	majority	majority	NOUN
finefocus-533	177	3	of	of	ADP
finefocus-533	177	4	the	the	DET
finefocus-533	177	5	top	top	ADJ
finefocus-533	177	6	greengenes	greengene	NOUN
finefocus-533	177	7	unclassified	unclassified	ADJ
finefocus-533	177	8	otus	otus	NOUN
finefocus-533	177	9	had	have	VERB
finefocus-533	177	10	a	a	DET
finefocus-533	177	11	higher	high	ADJ
finefocus-533	177	12	relative	relative	ADJ
finefocus-533	177	13	abundance	abundance	NOUN
finefocus-533	177	14	within	within	ADP
finefocus-533	177	15	the	the	DET
finefocus-533	177	16	amd	amd	PROPN
finefocus-533	177	17	sample	sample	NOUN
finefocus-533	177	18	location	location	NOUN
finefocus-533	177	19	subgroup	subgroup	NOUN
finefocus-533	177	20	.	.	PUNCT
finefocus-533	178	1	furthermore	furthermore	ADV
finefocus-533	178	2	,	,	PUNCT
finefocus-533	178	3	the	the	DET
finefocus-533	178	4	predominant	predominant	ADJ
finefocus-533	178	5	phylum	phylum	NOUN
finefocus-533	178	6	predicted	predict	VERB
finefocus-533	178	7	by	by	ADP
finefocus-533	178	8	rdb	rdb	PROPN
finefocus-533	178	9	classifier	classifier	NOUN
finefocus-533	178	10	for	for	ADP
finefocus-533	178	11	the	the	DET
finefocus-533	178	12	majority	majority	NOUN
finefocus-533	178	13	of	of	ADP
finefocus-533	178	14	these	these	DET
finefocus-533	178	15	samples	sample	NOUN
finefocus-533	178	16	was	be	AUX
finefocus-533	178	17	chloroflexi	chloroflexi	NOUN
finefocus-533	178	18	,	,	PUNCT
finefocus-533	178	19	which	which	PRON
finefocus-533	178	20	already	already	ADV
finefocus-533	178	21	was	be	AUX
finefocus-533	178	22	shown	show	VERB
finefocus-533	178	23	to	to	PART
finefocus-533	178	24	be	be	AUX
finefocus-533	178	25	driving	drive	VERB
finefocus-533	178	26	variation	variation	NOUN
finefocus-533	178	27	along	along	ADP
finefocus-533	178	28	the	the	DET
finefocus-533	178	29	second	second	ADJ
finefocus-533	178	30	principal	principal	ADJ
finefocus-533	178	31	coordinate	coordinate	NOUN
finefocus-533	178	32	.	.	PUNCT
finefocus-533	179	1	thus	thus	ADV
finefocus-533	179	2	,	,	PUNCT
finefocus-533	179	3	in	in	ADP
finefocus-533	179	4	conclusion	conclusion	NOUN
finefocus-533	179	5	,	,	PUNCT
finefocus-533	179	6	the	the	DET
finefocus-533	179	7	unassigned	unassigned	ADJ
finefocus-533	179	8	taxa	taxa	NOUN
finefocus-533	179	9	group	group	NOUN
finefocus-533	179	10	is	be	AUX
finefocus-533	179	11	composed	compose	VERB
finefocus-533	179	12	to	to	ADP
finefocus-533	179	13	a	a	DET
finefocus-533	179	14	large	large	ADJ
finefocus-533	179	15	degree	degree	NOUN
finefocus-533	179	16	with	with	ADP
finefocus-533	179	17	chloroflexi	chloroflexi	NOUN
finefocus-533	179	18	taxa	taxa	NOUN
finefocus-533	179	19	,	,	PUNCT
finefocus-533	179	20	which	which	PRON
finefocus-533	179	21	dominate	dominate	VERB
finefocus-533	179	22	amd	amd	NOUN
finefocus-533	179	23	sample	sample	NOUN
finefocus-533	179	24	locations	location	NOUN
finefocus-533	179	25	,	,	PUNCT
finefocus-533	179	26	especially	especially	ADV
finefocus-533	179	27	wetland	wetland	ADJ
finefocus-533	179	28	cell	cell	NOUN
finefocus-533	179	29	3	3	NUM
finefocus-533	179	30	.	.	NOUN
finefocus-533	179	31	taxa	taxa	NOUN
finefocus-533	179	32	richness	richness	NOUN
finefocus-533	179	33	and	and	CCONJ
finefocus-533	179	34	evenness	evenness	NOUN
finefocus-533	179	35	(	(	PUNCT
finefocus-533	179	36	differential	differential	NOUN
finefocus-533	179	37	abundance	abundance	NOUN
finefocus-533	179	38	)	)	PUNCT
finefocus-533	179	39	,	,	PUNCT
finefocus-533	179	40	as	as	SCONJ
finefocus-533	179	41	a	a	DET
finefocus-533	179	42	community	community	NOUN
finefocus-533	179	43	may	may	AUX
finefocus-533	179	44	have	have	VERB
finefocus-533	179	45	a	a	DET
finefocus-533	179	46	large	large	ADJ
finefocus-533	179	47	number	number	NOUN
finefocus-533	179	48	of	of	ADP
finefocus-533	179	49	taxa	taxa	NOUN
finefocus-533	179	50	but	but	CCONJ
finefocus-533	179	51	be	be	AUX
finefocus-533	179	52	dominated	dominate	VERB
finefocus-533	179	53	by	by	ADP
finefocus-533	179	54	a	a	DET
finefocus-533	179	55	few	few	ADJ
finefocus-533	179	56	select	select	ADJ
finefocus-533	179	57	taxa	taxa	NOUN
finefocus-533	179	58	(	(	PUNCT
finefocus-533	179	59	37	37	NUM
finefocus-533	179	60	)	)	PUNCT
finefocus-533	179	61	.	.	PUNCT
finefocus-533	180	1	the	the	DET
finefocus-533	180	2	heips	heip	NOUN
finefocus-533	180	3	evenness	evenness	ADJ
finefocus-533	180	4	alpha	alpha	NOUN
finefocus-533	180	5	diversity	diversity	NOUN
finefocus-533	180	6	index	index	NOUN
finefocus-533	180	7	does	do	AUX
finefocus-533	180	8	not	not	PART
finefocus-533	180	9	yield	yield	VERB
finefocus-533	180	10	statistical	statistical	ADJ
finefocus-533	180	11	significance	significance	NOUN
finefocus-533	180	12	,	,	PUNCT
finefocus-533	180	13	suggesting	suggest	VERB
finefocus-533	180	14	that	that	SCONJ
finefocus-533	180	15	a	a	DET
finefocus-533	180	16	proportion	proportion	NOUN
finefocus-533	180	17	of	of	ADP
finefocus-533	180	18	additional	additional	ADJ
finefocus-533	180	19	taxa	taxa	NOUN
finefocus-533	180	20	in	in	ADP
finefocus-533	180	21	ewc	ewc	PROPN
finefocus-533	180	22	may	may	AUX
finefocus-533	180	23	be	be	AUX
finefocus-533	180	24	rare	rare	ADJ
finefocus-533	180	25	taxa	taxa	NOUN
finefocus-533	180	26	.	.	PUNCT
finefocus-533	181	1	recently	recently	ADV
finefocus-533	181	2	there	there	PRON
finefocus-533	181	3	has	have	AUX
finefocus-533	181	4	been	be	AUX
finefocus-533	181	5	renewed	renew	VERB
finefocus-533	181	6	interest	interest	NOUN
finefocus-533	181	7	in	in	ADP
finefocus-533	181	8	rare	rare	ADJ
finefocus-533	181	9	taxa	taxa	NOUN
finefocus-533	181	10	with	with	ADP
finefocus-533	181	11	the	the	DET
finefocus-533	181	12	evidence	evidence	NOUN
finefocus-533	181	13	suggesting	suggest	VERB
finefocus-533	181	14	that	that	SCONJ
finefocus-533	181	15	rare	rare	ADJ
finefocus-533	181	16	taxa	taxa	NOUN
finefocus-533	181	17	can	can	AUX
finefocus-533	181	18	dictate	dictate	VERB
finefocus-533	181	19	and	and	CCONJ
finefocus-533	181	20	influence	influence	VERB
finefocus-533	181	21	the	the	DET
finefocus-533	181	22	dynamics	dynamic	NOUN
finefocus-533	181	23	of	of	ADP
finefocus-533	181	24	microbial	microbial	ADJ
finefocus-533	181	25	communities	community	NOUN
finefocus-533	181	26	(	(	PUNCT
finefocus-533	181	27	2	2	NUM
finefocus-533	181	28	)	)	PUNCT
finefocus-533	181	29	.	.	PUNCT
finefocus-533	182	1	thus	thus	ADV
finefocus-533	182	2	,	,	PUNCT
finefocus-533	182	3	evenness	evenness	NOUN
finefocus-533	182	4	may	may	AUX
finefocus-533	182	5	be	be	AUX
finefocus-533	182	6	a	a	DET
finefocus-533	182	7	good	good	ADJ
finefocus-533	182	8	descriptive	descriptive	ADJ
finefocus-533	182	9	index	index	NOUN
finefocus-533	182	10	but	but	CCONJ
finefocus-533	182	11	not	not	PART
finefocus-533	182	12	a	a	DET
finefocus-533	182	13	cut	cut	NOUN
finefocus-533	182	14	and	and	CCONJ
finefocus-533	182	15	dry	dry	ADJ
finefocus-533	182	16	indicator	indicator	NOUN
finefocus-533	182	17	of	of	ADP
finefocus-533	182	18	alpha	alpha	NOUN
finefocus-533	182	19	diversity	diversity	NOUN
finefocus-533	182	20	significance	significance	NOUN
finefocus-533	182	21	.	.	PUNCT
finefocus-533	183	1	beta	beta	ADJ
finefocus-533	183	2	diversity	diversity	NOUN
finefocus-533	183	3	analysis	analysis	NOUN
finefocus-533	183	4	indicates	indicate	VERB
finefocus-533	183	5	that	that	SCONJ
finefocus-533	183	6	the	the	DET
finefocus-533	183	7	diversity	diversity	NOUN
finefocus-533	183	8	between	between	ADP
finefocus-533	183	9	sample	sample	NOUN
finefocus-533	183	10	locations	location	NOUN
finefocus-533	183	11	was	be	AUX
finefocus-533	183	12	substantially	substantially	ADV
finefocus-533	183	13	different	different	ADJ
finefocus-533	183	14	between	between	ADP
finefocus-533	183	15	ewc	ewc	PROPN
finefocus-533	183	16	and	and	CCONJ
finefocus-533	183	17	amd	amd	PROPN
finefocus-533	183	18	subgroups	subgroup	NOUN
finefocus-533	183	19	along	along	ADP
finefocus-533	183	20	the	the	DET
finefocus-533	183	21	first	first	ADJ
finefocus-533	183	22	principal	principal	ADJ
finefocus-533	183	23	discussion	discussion	NOUN
finefocus-533	183	24	59applied	59applied	NUM
finefocus-533	183	25	&	&	CCONJ
finefocus-533	183	26	environmental	environmental	ADJ
finefocus-533	183	27	microbiology	microbiology	NOUN
finefocus-533	183	28	•	•	NOUN
finefocus-533	183	29	coordinate	coordinate	NOUN
finefocus-533	183	30	(	(	PUNCT
finefocus-533	183	31	54.64	54.64	NUM
finefocus-533	183	32	%	%	NOUN
finefocus-533	183	33	of	of	ADP
finefocus-533	183	34	explained	explain	VERB
finefocus-533	183	35	variance	variance	NOUN
finefocus-533	183	36	)	)	PUNCT
finefocus-533	183	37	.	.	PUNCT
finefocus-533	184	1	the	the	DET
finefocus-533	184	2	second	second	ADJ
finefocus-533	184	3	principal	principal	ADJ
finefocus-533	184	4	coordinate	coordinate	NOUN
finefocus-533	184	5	(	(	PUNCT
finefocus-533	184	6	20.91	20.91	NUM
finefocus-533	184	7	%	%	NOUN
finefocus-533	184	8	of	of	ADP
finefocus-533	184	9	explained	explain	VERB
finefocus-533	184	10	variance	variance	NOUN
finefocus-533	184	11	)	)	PUNCT
finefocus-533	184	12	further	far	ADV
finefocus-533	184	13	separated	separate	VERB
finefocus-533	184	14	the	the	DET
finefocus-533	184	15	solomon	solomon	PROPN
finefocus-533	184	16	mine	mine	PROPN
finefocus-533	184	17	constructed	construct	VERB
finefocus-533	184	18	wetland	wetland	NOUN
finefocus-533	184	19	cell	cell	NOUN
finefocus-533	184	20	3	3	NUM
finefocus-533	184	21	from	from	ADP
finefocus-533	184	22	the	the	DET
finefocus-533	184	23	other	other	ADJ
finefocus-533	184	24	sample	sample	NOUN
finefocus-533	184	25	locations	location	NOUN
finefocus-533	184	26	,	,	PUNCT
finefocus-533	184	27	suggesting	suggest	VERB
finefocus-533	184	28	a	a	DET
finefocus-533	184	29	large	large	ADJ
finefocus-533	184	30	change	change	NOUN
finefocus-533	184	31	in	in	ADP
finefocus-533	184	32	community	community	NOUN
finefocus-533	184	33	composition	composition	NOUN
finefocus-533	184	34	compared	compare	VERB
finefocus-533	184	35	to	to	ADP
finefocus-533	184	36	the	the	DET
finefocus-533	184	37	core	core	NOUN
finefocus-533	184	38	amd	amd	PROPN
finefocus-533	184	39	(	(	PUNCT
finefocus-533	184	40	smt	smt	PROPN
finefocus-533	184	41	,	,	PUNCT
finefocus-533	184	42	sma	sma	PROPN
finefocus-533	184	43	,	,	PUNCT
finefocus-533	184	44	cell	cell	NOUN
finefocus-533	184	45	1	1	NUM
finefocus-533	184	46	,	,	PUNCT
finefocus-533	184	47	cell	cell	NOUN
finefocus-533	184	48	2	2	NUM
finefocus-533	184	49	,	,	PUNCT
finefocus-533	184	50	and	and	CCONJ
finefocus-533	184	51	smd	smd	NOUN
finefocus-533	184	52	)	)	PUNCT
finefocus-533	184	53	and	and	CCONJ
finefocus-533	184	54	ewc	ewc	PROPN
finefocus-533	184	55	groups	group	NOUN
finefocus-533	184	56	.	.	PUNCT
finefocus-533	185	1	pcoa	pcoa	NOUN
finefocus-533	185	2	biplots	biplot	NOUN
finefocus-533	185	3	indicate	indicate	VERB
finefocus-533	185	4	that	that	SCONJ
finefocus-533	185	5	firmicutes	firmicute	NOUN
finefocus-533	185	6	play	play	VERB
finefocus-533	185	7	a	a	DET
finefocus-533	185	8	role	role	NOUN
finefocus-533	185	9	in	in	ADP
finefocus-533	185	10	driving	drive	VERB
finefocus-533	185	11	this	this	DET
finefocus-533	185	12	positioning	positioning	NOUN
finefocus-533	185	13	of	of	ADP
finefocus-533	185	14	the	the	DET
finefocus-533	185	15	constructed	construct	VERB
finefocus-533	185	16	wetland	wetland	NOUN
finefocus-533	185	17	cell	cell	NOUN
finefocus-533	185	18	3	3	NUM
finefocus-533	185	19	community	community	NOUN
finefocus-533	185	20	within	within	ADP
finefocus-533	185	21	the	the	DET
finefocus-533	185	22	second	second	ADJ
finefocus-533	185	23	principal	principal	ADJ
finefocus-533	185	24	coordinate	coordinate	NOUN
finefocus-533	185	25	.	.	PUNCT
finefocus-533	186	1	cell	cell	NOUN
finefocus-533	186	2	3	3	NUM
finefocus-533	186	3	also	also	ADV
finefocus-533	186	4	physically	physically	ADV
finefocus-533	186	5	differed	differ	VERB
finefocus-533	186	6	from	from	ADP
finefocus-533	186	7	the	the	DET
finefocus-533	186	8	other	other	ADJ
finefocus-533	186	9	constructed	construct	VERB
finefocus-533	186	10	wetland	wetland	NOUN
finefocus-533	186	11	cells	cell	NOUN
finefocus-533	186	12	in	in	ADP
finefocus-533	186	13	that	that	SCONJ
finefocus-533	186	14	it	it	PRON
finefocus-533	186	15	had	have	AUX
finefocus-533	186	16	noticeable	noticeable	ADJ
finefocus-533	186	17	algal	algal	ADJ
finefocus-533	186	18	and	and	CCONJ
finefocus-533	186	19	aquatic	aquatic	ADJ
finefocus-533	186	20	plant	plant	NOUN
finefocus-533	186	21	growth	growth	NOUN
finefocus-533	186	22	.	.	PUNCT
finefocus-533	187	1	constructed	construct	VERB
finefocus-533	187	2	wetland	wetland	NOUN
finefocus-533	187	3	cells	cell	NOUN
finefocus-533	187	4	1	1	NUM
finefocus-533	187	5	and	and	CCONJ
finefocus-533	187	6	2	2	NUM
finefocus-533	187	7	were	be	AUX
finefocus-533	187	8	heavily	heavily	ADV
finefocus-533	187	9	stained	stain	VERB
finefocus-533	187	10	with	with	ADP
finefocus-533	187	11	iron	iron	NOUN
finefocus-533	187	12	oxides	oxide	NOUN
finefocus-533	187	13	and	and	CCONJ
finefocus-533	187	14	lacked	lack	VERB
finefocus-533	187	15	noticeable	noticeable	ADJ
finefocus-533	187	16	biological	biological	ADJ
finefocus-533	187	17	activity	activity	NOUN
finefocus-533	187	18	to	to	ADP
finefocus-533	187	19	the	the	DET
finefocus-533	187	20	naked	naked	ADJ
finefocus-533	187	21	eye	eye	NOUN
finefocus-533	187	22	(	(	PUNCT
finefocus-533	187	23	figure	figure	NOUN
finefocus-533	187	24	3	3	NUM
finefocus-533	187	25	)	)	PUNCT
finefocus-533	187	26	.	.	PUNCT
finefocus-533	188	1	the	the	DET
finefocus-533	188	2	distance	distance	NOUN
finefocus-533	188	3	matrix	matrix	NOUN
finefocus-533	188	4	comparison	comparison	NOUN
finefocus-533	188	5	,	,	PUNCT
finefocus-533	188	6	which	which	PRON
finefocus-533	188	7	took	take	VERB
finefocus-533	188	8	all	all	DET
finefocus-533	188	9	seven	seven	NUM
finefocus-533	188	10	collective	collective	ADJ
finefocus-533	188	11	principal	principal	ADJ
finefocus-533	188	12	coordinates	coordinate	NOUN
finefocus-533	188	13	into	into	ADP
finefocus-533	188	14	account	account	NOUN
finefocus-533	188	15	,	,	PUNCT
finefocus-533	188	16	exhibited	exhibit	VERB
finefocus-533	188	17	a	a	DET
finefocus-533	188	18	statistically	statistically	ADV
finefocus-533	188	19	significant	significant	ADJ
finefocus-533	188	20	difference	difference	NOUN
finefocus-533	188	21	between	between	ADP
finefocus-533	188	22	amd	amd	PROPN
finefocus-533	188	23	and	and	CCONJ
finefocus-533	188	24	ewc	ewc	PROPN
finefocus-533	188	25	sample	sample	PROPN
finefocus-533	188	26	location	location	NOUN
finefocus-533	188	27	groups	group	NOUN
finefocus-533	188	28	,	,	PUNCT
finefocus-533	188	29	suggesting	suggest	VERB
finefocus-533	188	30	that	that	SCONJ
finefocus-533	188	31	the	the	DET
finefocus-533	188	32	variance	variance	NOUN
finefocus-533	188	33	between	between	ADP
finefocus-533	188	34	samples	sample	NOUN
finefocus-533	188	35	were	be	AUX
finefocus-533	188	36	statistically	statistically	ADV
finefocus-533	188	37	closer	close	ADJ
finefocus-533	188	38	to	to	ADP
finefocus-533	188	39	each	each	DET
finefocus-533	188	40	other	other	ADJ
finefocus-533	188	41	than	than	ADP
finefocus-533	188	42	between	between	ADP
finefocus-533	188	43	sample	sample	NOUN
finefocus-533	188	44	locations	location	NOUN
finefocus-533	188	45	.	.	PUNCT
finefocus-533	189	1	historically	historically	ADV
finefocus-533	189	2	,	,	PUNCT
finefocus-533	189	3	the	the	DET
finefocus-533	189	4	constructed	construct	VERB
finefocus-533	189	5	wetland	wetland	NOUN
finefocus-533	189	6	system	system	NOUN
finefocus-533	189	7	has	have	AUX
finefocus-533	189	8	had	have	VERB
finefocus-533	189	9	only	only	ADV
finefocus-533	189	10	a	a	DET
finefocus-533	189	11	minor	minor	ADJ
finefocus-533	189	12	effect	effect	NOUN
finefocus-533	189	13	on	on	ADP
finefocus-533	189	14	reducing	reduce	VERB
finefocus-533	189	15	metal	metal	NOUN
finefocus-533	189	16	loads	load	NOUN
finefocus-533	189	17	and	and	CCONJ
finefocus-533	189	18	increasing	increase	VERB
finefocus-533	189	19	ph	ph	NOUN
finefocus-533	189	20	after	after	ADP
finefocus-533	189	21	the	the	DET
finefocus-533	189	22	first	first	ADJ
finefocus-533	189	23	three	three	NUM
finefocus-533	189	24	years	year	NOUN
finefocus-533	189	25	of	of	ADP
finefocus-533	189	26	service	service	NOUN
finefocus-533	189	27	(	(	PUNCT
finefocus-533	189	28	47	47	NUM
finefocus-533	189	29	)	)	PUNCT
finefocus-533	189	30	.	.	PUNCT
finefocus-533	190	1	although	although	SCONJ
finefocus-533	190	2	our	our	PRON
finefocus-533	190	3	budget	budget	NOUN
finefocus-533	190	4	did	do	AUX
finefocus-533	190	5	not	not	PART
finefocus-533	190	6	allow	allow	VERB
finefocus-533	190	7	for	for	ADP
finefocus-533	190	8	heavy	heavy	ADJ
finefocus-533	190	9	metal	metal	NOUN
finefocus-533	190	10	analysis	analysis	NOUN
finefocus-533	190	11	of	of	ADP
finefocus-533	190	12	the	the	DET
finefocus-533	190	13	water	water	NOUN
finefocus-533	190	14	samples	sample	NOUN
finefocus-533	190	15	,	,	PUNCT
finefocus-533	190	16	our	our	PRON
finefocus-533	190	17	waterquality	waterquality	NOUN
finefocus-533	190	18	data	datum	NOUN
finefocus-533	190	19	collected	collect	VERB
finefocus-533	190	20	during	during	ADP
finefocus-533	190	21	field	field	NOUN
finefocus-533	190	22	work	work	NOUN
finefocus-533	190	23	(	(	PUNCT
finefocus-533	190	24	ph	ph	NOUN
finefocus-533	190	25	and	and	CCONJ
finefocus-533	190	26	conductivity	conductivity	NOUN
finefocus-533	190	27	)	)	PUNCT
finefocus-533	190	28	,	,	PUNCT
finefocus-533	190	29	along	along	ADP
finefocus-533	190	30	with	with	ADP
finefocus-533	190	31	recent	recent	ADJ
finefocus-533	190	32	water	water	NOUN
finefocus-533	190	33	-	-	PUNCT
finefocus-533	190	34	quality	quality	NOUN
finefocus-533	190	35	data	datum	NOUN
finefocus-533	190	36	by	by	ADP
finefocus-533	190	37	the	the	DET
finefocus-533	190	38	wcrc	wcrc	NOUN
finefocus-533	190	39	suggest	suggest	VERB
finefocus-533	190	40	that	that	SCONJ
finefocus-533	190	41	heavy	heavy	ADJ
finefocus-533	190	42	metals	metal	NOUN
finefocus-533	190	43	continue	continue	VERB
finefocus-533	190	44	to	to	PART
finefocus-533	190	45	leach	leach	VERB
finefocus-533	190	46	from	from	ADP
finefocus-533	190	47	minerals	mineral	NOUN
finefocus-533	190	48	exposed	expose	VERB
finefocus-533	190	49	in	in	ADP
finefocus-533	190	50	the	the	DET
finefocus-533	190	51	mine	mine	ADJ
finefocus-533	190	52	workings	working	NOUN
finefocus-533	190	53	and	and	CCONJ
finefocus-533	190	54	enter	enter	VERB
finefocus-533	190	55	ewc	ewc	PROPN
finefocus-533	190	56	(	(	PUNCT
finefocus-533	190	57	table	table	NOUN
finefocus-533	190	58	3	3	NUM
finefocus-533	190	59	)	)	PUNCT
finefocus-533	190	60	.	.	PUNCT
finefocus-533	191	1	this	this	DET
finefocus-533	191	2	study	study	NOUN
finefocus-533	191	3	’s	’s	PART
finefocus-533	191	4	budgetary	budgetary	ADJ
finefocus-533	191	5	restrictions	restriction	NOUN
finefocus-533	191	6	and	and	CCONJ
finefocus-533	191	7	experimental	experimental	ADJ
finefocus-533	191	8	design	design	NOUN
finefocus-533	191	9	resulted	result	VERB
finefocus-533	191	10	in	in	ADP
finefocus-533	191	11	low	low	ADJ
finefocus-533	191	12	statistical	statistical	ADJ
finefocus-533	191	13	power	power	NOUN
finefocus-533	191	14	,	,	PUNCT
finefocus-533	191	15	but	but	CCONJ
finefocus-533	191	16	interesting	interesting	ADJ
finefocus-533	191	17	changes	change	NOUN
finefocus-533	191	18	in	in	ADP
finefocus-533	191	19	relative	relative	ADJ
finefocus-533	191	20	abundance	abundance	NOUN
finefocus-533	191	21	data	datum	NOUN
finefocus-533	191	22	of	of	ADP
finefocus-533	191	23	microbes	microbe	NOUN
finefocus-533	191	24	suggests	suggest	VERB
finefocus-533	191	25	future	future	ADJ
finefocus-533	191	26	investigation	investigation	NOUN
finefocus-533	191	27	is	be	AUX
finefocus-533	191	28	warranted	warrant	VERB
finefocus-533	191	29	.	.	PUNCT
finefocus-533	192	1	for	for	ADP
finefocus-533	192	2	example	example	NOUN
finefocus-533	192	3	,	,	PUNCT
finefocus-533	192	4	the	the	DET
finefocus-533	192	5	parasitic	parasitic	ADJ
finefocus-533	192	6	bacterium	bacterium	NOUN
finefocus-533	192	7	bdellovibrio	bdellovibrio	NOUN
finefocus-533	192	8	was	be	AUX
finefocus-533	192	9	observed	observe	VERB
finefocus-533	192	10	to	to	PART
finefocus-533	192	11	be	be	AUX
finefocus-533	192	12	higher	high	ADJ
finefocus-533	192	13	in	in	ADP
finefocus-533	192	14	abundance	abundance	NOUN
finefocus-533	192	15	in	in	ADP
finefocus-533	192	16	amd	amd	ADJ
finefocus-533	192	17	samples	sample	NOUN
finefocus-533	192	18	compared	compare	VERB
finefocus-533	192	19	to	to	ADP
finefocus-533	192	20	ewc	ewc	PROPN
finefocus-533	192	21	(	(	PUNCT
finefocus-533	192	22	fdr	fdr	PROPN
finefocus-533	192	23	adjusted	adjust	VERB
finefocus-533	192	24	p=0.685	p=0.685	NOUN
finefocus-533	192	25	)	)	PUNCT
finefocus-533	192	26	.	.	PUNCT
finefocus-533	193	1	this	this	DET
finefocus-533	193	2	bacterium	bacterium	NOUN
finefocus-533	193	3	is	be	AUX
finefocus-533	193	4	interesting	interesting	ADJ
finefocus-533	193	5	from	from	ADP
finefocus-533	193	6	the	the	DET
finefocus-533	193	7	standpoint	standpoint	NOUN
finefocus-533	193	8	that	that	SCONJ
finefocus-533	193	9	it	it	PRON
finefocus-533	193	10	has	have	AUX
finefocus-533	193	11	the	the	DET
finefocus-533	193	12	potential	potential	NOUN
finefocus-533	193	13	to	to	PART
finefocus-533	193	14	be	be	AUX
finefocus-533	193	15	used	use	VERB
finefocus-533	193	16	as	as	ADP
finefocus-533	193	17	a	a	DET
finefocus-533	193	18	means	means	NOUN
finefocus-533	193	19	for	for	ADP
finefocus-533	193	20	biological	biological	ADJ
finefocus-533	193	21	control	control	NOUN
finefocus-533	193	22	of	of	ADP
finefocus-533	193	23	amd	amd	PROPN
finefocus-533	193	24	production	production	NOUN
finefocus-533	193	25	by	by	ADP
finefocus-533	193	26	reducing	reduce	VERB
finefocus-533	193	27	populations	population	NOUN
finefocus-533	193	28	of	of	ADP
finefocus-533	193	29	gram	gram	NOUN
finefocus-533	193	30	-	-	PUNCT
finefocus-533	193	31	negative	negative	ADJ
finefocus-533	193	32	chemolithotrophs	chemolithotroph	NOUN
finefocus-533	193	33	through	through	ADP
finefocus-533	193	34	predation	predation	NOUN
finefocus-533	193	35	(	(	PUNCT
finefocus-533	193	36	20	20	NUM
finefocus-533	193	37	)	)	PUNCT
finefocus-533	193	38	.	.	PUNCT
finefocus-533	194	1	gallionella	gallionella	PROPN
finefocus-533	194	2	is	be	AUX
finefocus-533	194	3	another	another	DET
finefocus-533	194	4	interesting	interesting	ADJ
finefocus-533	194	5	genus	genus	NOUN
finefocus-533	194	6	associated	associate	VERB
finefocus-533	194	7	with	with	ADP
finefocus-533	194	8	amd	amd	PROPN
finefocus-533	194	9	as	as	ADP
finefocus-533	194	10	gallionella	gallionella	PROPN
finefocus-533	194	11	species	specie	NOUN
finefocus-533	194	12	are	be	AUX
finefocus-533	194	13	iron	iron	NOUN
finefocus-533	194	14	-	-	PUNCT
finefocus-533	194	15	oxidizing	oxidize	VERB
finefocus-533	194	16	chemolithotrophs	chemolithotroph	NOUN
finefocus-533	194	17	(	(	PUNCT
finefocus-533	194	18	fdr	fdr	PROPN
finefocus-533	194	19	adjusted	adjust	VERB
finefocus-533	194	20	,	,	PUNCT
finefocus-533	194	21	p=0.615	p=0.615	NOUN
finefocus-533	194	22	)	)	PUNCT
finefocus-533	194	23	(	(	PUNCT
finefocus-533	194	24	45	45	NUM
finefocus-533	194	25	)	)	PUNCT
finefocus-533	194	26	.	.	PUNCT
finefocus-533	195	1	this	this	DET
finefocus-533	195	2	microbe	microbe	NOUN
finefocus-533	195	3	was	be	AUX
finefocus-533	195	4	observed	observe	VERB
finefocus-533	195	5	at	at	ADP
finefocus-533	195	6	higher	high	ADJ
finefocus-533	195	7	relative	relative	ADJ
finefocus-533	195	8	abundance	abundance	NOUN
finefocus-533	195	9	levels	level	NOUN
finefocus-533	195	10	within	within	ADP
finefocus-533	195	11	the	the	DET
finefocus-533	195	12	mine	mine	NOUN
finefocus-533	195	13	adit	adit	NOUN
finefocus-533	195	14	,	,	PUNCT
finefocus-533	195	15	where	where	SCONJ
finefocus-533	195	16	chemolithotrophs	chemolithotroph	NOUN
finefocus-533	195	17	can	can	AUX
finefocus-533	195	18	thrive	thrive	VERB
finefocus-533	195	19	(	(	PUNCT
finefocus-533	195	20	fdr	fdr	PROPN
finefocus-533	195	21	adjusted	adjust	VERB
finefocus-533	195	22	,	,	PUNCT
finefocus-533	195	23	p=0.311	p=0.311	NOUN
finefocus-533	195	24	)	)	PUNCT
finefocus-533	195	25	.	.	PUNCT
finefocus-533	196	1	more	more	ADV
finefocus-533	196	2	generally	generally	ADV
finefocus-533	196	3	,	,	PUNCT
finefocus-533	196	4	the	the	DET
finefocus-533	196	5	phylum	phylum	NOUN
finefocus-533	196	6	proteobacteria	proteobacteria	NOUN
finefocus-533	196	7	was	be	AUX
finefocus-533	196	8	enriched	enrich	VERB
finefocus-533	196	9	within	within	ADP
finefocus-533	196	10	the	the	DET
finefocus-533	196	11	amd	amd	PROPN
finefocus-533	196	12	sample	sample	NOUN
finefocus-533	196	13	locations	location	NOUN
finefocus-533	196	14	,	,	PUNCT
finefocus-533	196	15	which	which	PRON
finefocus-533	196	16	makes	make	VERB
finefocus-533	196	17	sense	sense	NOUN
finefocus-533	196	18	in	in	ADP
finefocus-533	196	19	that	that	SCONJ
finefocus-533	196	20	they	they	PRON
finefocus-533	196	21	are	be	AUX
finefocus-533	196	22	commonly	commonly	ADV
finefocus-533	196	23	found	find	VERB
finefocus-533	196	24	in	in	ADP
finefocus-533	196	25	acidic	acidic	ADJ
finefocus-533	196	26	ecosystems	ecosystem	NOUN
finefocus-533	196	27	(	(	PUNCT
finefocus-533	196	28	31	31	NUM
finefocus-533	196	29	)	)	PUNCT
finefocus-533	196	30	.	.	PUNCT
finefocus-533	197	1	the	the	DET
finefocus-533	197	2	phylum	phylum	NOUN
finefocus-533	197	3	proteobacteria	proteobacteria	NOUN
finefocus-533	197	4	includes	include	VERB
finefocus-533	197	5	the	the	DET
finefocus-533	197	6	acetobacteraceae	acetobacteraceae	PROPN
finefocus-533	197	7	and	and	CCONJ
finefocus-533	197	8	rhodospirillaceae	rhodospirillaceae	VERB
finefocus-533	197	9	family	family	NOUN
finefocus-533	197	10	members	member	NOUN
finefocus-533	197	11	(	(	PUNCT
finefocus-533	197	12	21	21	NUM
finefocus-533	197	13	)	)	PUNCT
finefocus-533	197	14	.	.	PUNCT
finefocus-533	198	1	these	these	DET
finefocus-533	198	2	alphaproteobacteria	alphaproteobacteria	PROPN
finefocus-533	198	3	and	and	CCONJ
finefocus-533	198	4	betaproteobacteria	betaproteobacteria	PROPN
finefocus-533	198	5	family	family	NOUN
finefocus-533	198	6	taxa	taxa	NOUN
finefocus-533	198	7	,	,	PUNCT
finefocus-533	198	8	respectively	respectively	ADV
finefocus-533	198	9	,	,	PUNCT
finefocus-533	198	10	drove	drive	VERB
finefocus-533	198	11	beta	beta	ADJ
finefocus-533	198	12	diversity	diversity	NOUN
finefocus-533	198	13	separation	separation	NOUN
finefocus-533	198	14	between	between	ADP
finefocus-533	198	15	amd	amd	PROPN
finefocus-533	198	16	and	and	CCONJ
finefocus-533	198	17	ewc	ewc	PROPN
finefocus-533	198	18	sample	sample	PROPN
finefocus-533	198	19	locations	location	NOUN
finefocus-533	198	20	.	.	PUNCT
finefocus-533	199	1	acetobacteraceae	acetobacteraceae	PROPN
finefocus-533	199	2	are	be	AUX
finefocus-533	199	3	acid	acid	ADJ
finefocus-533	199	4	-	-	PUNCT
finefocus-533	199	5	tolerant	tolerant	NOUN
finefocus-533	199	6	aerobes	aerobe	VERB
finefocus-533	199	7	that	that	SCONJ
finefocus-533	199	8	typically	typically	ADV
finefocus-533	199	9	ferment	ferment	VERB
finefocus-533	199	10	organic	organic	ADJ
finefocus-533	199	11	material	material	NOUN
finefocus-533	199	12	on	on	ADP
finefocus-533	199	13	the	the	DET
finefocus-533	199	14	surface	surface	NOUN
finefocus-533	199	15	of	of	ADP
finefocus-533	199	16	water	water	NOUN
finefocus-533	199	17	and	and	CCONJ
finefocus-533	199	18	are	be	AUX
finefocus-533	199	19	likely	likely	ADJ
finefocus-533	199	20	to	to	PART
finefocus-533	199	21	thrive	thrive	VERB
finefocus-533	199	22	in	in	ADP
finefocus-533	199	23	amd	amd	NOUN
finefocus-533	199	24	outside	outside	ADP
finefocus-533	199	25	of	of	ADP
finefocus-533	199	26	the	the	DET
finefocus-533	199	27	mine	mine	NOUN
finefocus-533	199	28	adit	adit	NOUN
finefocus-533	199	29	,	,	PUNCT
finefocus-533	199	30	while	while	SCONJ
finefocus-533	199	31	rhodospirillaceae	rhodospirillaceae	VERB
finefocus-533	199	32	family	family	NOUN
finefocus-533	199	33	members	member	NOUN
finefocus-533	199	34	are	be	AUX
finefocus-533	199	35	purple	purple	ADJ
finefocus-533	199	36	non	non	ADJ
finefocus-533	199	37	-	-	ADJ
finefocus-533	199	38	sulfur	sulfur	ADJ
finefocus-533	199	39	bacteria	bacteria	NOUN
finefocus-533	199	40	that	that	PRON
finefocus-533	199	41	can	can	AUX
finefocus-533	199	42	utilize	utilize	VERB
finefocus-533	199	43	anoxygenic	anoxygenic	ADJ
finefocus-533	199	44	photosynthesis	photosynthesis	NOUN
finefocus-533	199	45	60•	60•	NUM
finefocus-533	199	46	fine	fine	ADJ
finefocus-533	199	47	focus	focus	NOUN
finefocus-533	199	48	,	,	PUNCT
finefocus-533	199	49	vol	vol	NOUN
finefocus-533	199	50	.	.	PUNCT
finefocus-533	199	51	4(1	4(1	NOUN
finefocus-533	199	52	)	)	PUNCT
finefocus-533	199	53	using	use	VERB
finefocus-533	199	54	hydrogen	hydrogen	NOUN
finefocus-533	199	55	or	or	CCONJ
finefocus-533	199	56	low	low	ADJ
finefocus-533	199	57	concentrations	concentration	NOUN
finefocus-533	199	58	of	of	ADP
finefocus-533	199	59	sulfide	sulfide	NOUN
finefocus-533	199	60	while	while	SCONJ
finefocus-533	199	61	living	live	VERB
finefocus-533	199	62	in	in	ADP
finefocus-533	199	63	anaerobic	anaerobic	ADJ
finefocus-533	199	64	aquatic	aquatic	ADJ
finefocus-533	199	65	environments	environment	NOUN
finefocus-533	199	66	,	,	PUNCT
finefocus-533	199	67	such	such	ADJ
finefocus-533	199	68	as	as	ADP
finefocus-533	199	69	the	the	DET
finefocus-533	199	70	amd	amd	PROPN
finefocus-533	199	71	sediment	sediment	NOUN
finefocus-533	199	72	.	.	PUNCT
finefocus-533	200	1	constructed	construct	VERB
finefocus-533	200	2	wetland	wetland	NOUN
finefocus-533	200	3	cell	cell	NOUN
finefocus-533	200	4	3	3	NUM
finefocus-533	200	5	contained	contain	VERB
finefocus-533	200	6	an	an	DET
finefocus-533	200	7	abundance	abundance	NOUN
finefocus-533	200	8	of	of	ADP
finefocus-533	200	9	bacteria	bacteria	NOUN
finefocus-533	200	10	within	within	ADP
finefocus-533	200	11	the	the	DET
finefocus-533	200	12	phylum	phylum	NOUN
finefocus-533	200	13	chloroflexi	chloroflexi	NOUN
finefocus-533	200	14	,	,	PUNCT
finefocus-533	200	15	which	which	PRON
finefocus-533	200	16	are	be	AUX
finefocus-533	200	17	generally	generally	ADV
finefocus-533	200	18	composed	compose	VERB
finefocus-533	200	19	of	of	ADP
finefocus-533	200	20	purple	purple	ADJ
finefocus-533	200	21	and	and	CCONJ
finefocus-533	200	22	green	green	ADJ
finefocus-533	200	23	bacteria	bacteria	NOUN
finefocus-533	200	24	that	that	PRON
finefocus-533	200	25	may	may	AUX
finefocus-533	200	26	use	use	VERB
finefocus-533	200	27	sulfide	sulfide	NOUN
finefocus-533	200	28	as	as	ADP
finefocus-533	200	29	an	an	DET
finefocus-533	200	30	electron	electron	NOUN
finefocus-533	200	31	donor	donor	NOUN
finefocus-533	200	32	for	for	ADP
finefocus-533	200	33	anoxygenic	anoxygenic	ADJ
finefocus-533	200	34	photosynthesis	photosynthesis	NOUN
finefocus-533	200	35	and	and	CCONJ
finefocus-533	200	36	have	have	AUX
finefocus-533	200	37	previously	previously	ADV
finefocus-533	200	38	been	be	AUX
finefocus-533	200	39	associated	associate	VERB
finefocus-533	200	40	with	with	ADP
finefocus-533	200	41	amd	amd	PROPN
finefocus-533	200	42	(	(	PUNCT
finefocus-533	200	43	48	48	NUM
finefocus-533	200	44	)	)	PUNCT
finefocus-533	200	45	.	.	PUNCT
finefocus-533	201	1	additionally	additionally	ADV
finefocus-533	201	2	,	,	PUNCT
finefocus-533	201	3	the	the	DET
finefocus-533	201	4	phylum	phylum	NOUN
finefocus-533	201	5	firmicutes	firmicute	VERB
finefocus-533	201	6	strongly	strongly	ADV
finefocus-533	201	7	drives	drive	VERB
finefocus-533	201	8	the	the	DET
finefocus-533	201	9	microbial	microbial	ADJ
finefocus-533	201	10	community	community	NOUN
finefocus-533	201	11	in	in	ADP
finefocus-533	201	12	cell	cell	NOUN
finefocus-533	201	13	3	3	NUM
finefocus-533	201	14	along	along	ADP
finefocus-533	201	15	the	the	DET
finefocus-533	201	16	second	second	ADJ
finefocus-533	201	17	principal	principal	ADJ
finefocus-533	201	18	coordinate	coordinate	NOUN
finefocus-533	201	19	axis	axis	NOUN
finefocus-533	201	20	.	.	PUNCT
finefocus-533	202	1	there	there	PRON
finefocus-533	202	2	are	be	VERB
finefocus-533	202	3	many	many	ADJ
finefocus-533	202	4	sulfate	sulfate	NOUN
finefocus-533	202	5	-	-	PUNCT
finefocus-533	202	6	reducing	reduce	VERB
finefocus-533	202	7	bacteria	bacteria	NOUN
finefocus-533	202	8	that	that	PRON
finefocus-533	202	9	belong	belong	VERB
finefocus-533	202	10	to	to	ADP
finefocus-533	202	11	the	the	DET
finefocus-533	202	12	firmicutes	firmicute	NOUN
finefocus-533	202	13	,	,	PUNCT
finefocus-533	202	14	such	such	ADJ
finefocus-533	202	15	as	as	ADP
finefocus-533	202	16	the	the	DET
finefocus-533	202	17	alicyclobacillaceae	alicyclobacillaceae	PROPN
finefocus-533	202	18	family	family	NOUN
finefocus-533	202	19	found	find	VERB
finefocus-533	202	20	in	in	ADP
finefocus-533	202	21	cell	cell	NOUN
finefocus-533	202	22	3	3	NUM
finefocus-533	202	23	,	,	PUNCT
finefocus-533	202	24	which	which	PRON
finefocus-533	202	25	likely	likely	ADV
finefocus-533	202	26	are	be	AUX
finefocus-533	202	27	reducing	reduce	VERB
finefocus-533	202	28	sulfate	sulfate	NOUN
finefocus-533	202	29	and	and	CCONJ
finefocus-533	202	30	thus	thus	ADV
finefocus-533	202	31	reducing	reduce	VERB
finefocus-533	202	32	ph	ph	NOUN
finefocus-533	202	33	and	and	CCONJ
finefocus-533	202	34	helping	help	VERB
finefocus-533	202	35	precipitate	precipitate	VERB
finefocus-533	202	36	heavy	heavy	ADJ
finefocus-533	202	37	metals	metal	NOUN
finefocus-533	202	38	.	.	PUNCT
finefocus-533	203	1	the	the	DET
finefocus-533	203	2	aquatic	aquatic	ADJ
finefocus-533	203	3	bacterial	bacterial	ADJ
finefocus-533	203	4	family	family	NOUN
finefocus-533	203	5	isosphaeraceae	isosphaeraceae	PROPN
finefocus-533	203	6	,	,	PUNCT
finefocus-533	203	7	which	which	PRON
finefocus-533	203	8	includes	include	VERB
finefocus-533	203	9	a	a	DET
finefocus-533	203	10	number	number	NOUN
finefocus-533	203	11	of	of	ADP
finefocus-533	203	12	characterized	characterize	VERB
finefocus-533	203	13	moderately	moderately	ADV
finefocus-533	203	14	acidophilic	acidophilic	ADJ
finefocus-533	203	15	genera	genera	NOUN
finefocus-533	203	16	,	,	PUNCT
finefocus-533	203	17	was	be	AUX
finefocus-533	203	18	also	also	ADV
finefocus-533	203	19	associated	associate	VERB
finefocus-533	203	20	with	with	ADP
finefocus-533	203	21	wetland	wetland	NOUN
finefocus-533	203	22	cell	cell	NOUN
finefocus-533	203	23	3	3	NUM
finefocus-533	203	24	(	(	PUNCT
finefocus-533	203	25	25	25	NUM
finefocus-533	203	26	,	,	PUNCT
finefocus-533	203	27	28	28	NUM
finefocus-533	203	28	)	)	PUNCT
finefocus-533	203	29	.	.	PUNCT
finefocus-533	204	1	acidophilic	acidophilic	PROPN
finefocus-533	204	2	isophaeraceae	isophaeraceae	PROPN
finefocus-533	204	3	members	member	NOUN
finefocus-533	204	4	are	be	AUX
finefocus-533	204	5	chemohetrorophs	chemohetroroph	NOUN
finefocus-533	204	6	that	that	PRON
finefocus-533	204	7	rely	rely	VERB
finefocus-533	204	8	on	on	ADP
finefocus-533	204	9	carbohydrates	carbohydrate	NOUN
finefocus-533	204	10	yielded	yield	VERB
finefocus-533	204	11	from	from	ADP
finefocus-533	204	12	plant	plant	NOUN
finefocus-533	204	13	and	and	CCONJ
finefocus-533	204	14	microbial	microbial	ADJ
finefocus-533	204	15	sources	source	NOUN
finefocus-533	204	16	,	,	PUNCT
finefocus-533	204	17	thus	thus	ADV
finefocus-533	204	18	they	they	PRON
finefocus-533	204	19	may	may	AUX
finefocus-533	204	20	be	be	AUX
finefocus-533	204	21	important	important	ADJ
finefocus-533	204	22	in	in	ADP
finefocus-533	204	23	the	the	DET
finefocus-533	204	24	degradation	degradation	NOUN
finefocus-533	204	25	of	of	ADP
finefocus-533	204	26	the	the	DET
finefocus-533	204	27	abundant	abundant	ADJ
finefocus-533	204	28	organic	organic	ADJ
finefocus-533	204	29	material	material	NOUN
finefocus-533	204	30	observed	observe	VERB
finefocus-533	204	31	within	within	ADP
finefocus-533	204	32	cell	cell	NOUN
finefocus-533	204	33	3	3	NUM
finefocus-533	204	34	(	(	PUNCT
finefocus-533	204	35	10	10	NUM
finefocus-533	204	36	)	)	PUNCT
finefocus-533	204	37	.	.	PUNCT
finefocus-533	205	1	limitations	limitation	NOUN
finefocus-533	205	2	of	of	ADP
finefocus-533	205	3	this	this	DET
finefocus-533	205	4	preliminary	preliminary	ADJ
finefocus-533	205	5	analysis	analysis	NOUN
finefocus-533	205	6	include	include	VERB
finefocus-533	205	7	low	low	ADJ
finefocus-533	205	8	statistical	statistical	ADJ
finefocus-533	205	9	power	power	NOUN
finefocus-533	205	10	,	,	PUNCT
finefocus-533	205	11	which	which	PRON
finefocus-533	205	12	increases	increase	VERB
finefocus-533	205	13	the	the	DET
finefocus-533	205	14	risk	risk	NOUN
finefocus-533	205	15	of	of	ADP
finefocus-533	205	16	type	type	NOUN
finefocus-533	205	17	ii	ii	NOUN
finefocus-533	205	18	error	error	NOUN
finefocus-533	205	19	,	,	PUNCT
finefocus-533	205	20	and	and	CCONJ
finefocus-533	205	21	thus	thus	ADV
finefocus-533	205	22	our	our	PRON
finefocus-533	205	23	ability	ability	NOUN
finefocus-533	205	24	to	to	PART
finefocus-533	205	25	identify	identify	VERB
finefocus-533	205	26	major	major	ADJ
finefocus-533	205	27	taxa	taxa	NOUN
finefocus-533	205	28	that	that	PRON
finefocus-533	205	29	are	be	AUX
finefocus-533	205	30	over/	over/	ADV
finefocus-533	205	31	under	under	ADV
finefocus-533	205	32	-	-	PUNCT
finefocus-533	205	33	represented	represent	VERB
finefocus-533	205	34	in	in	ADP
finefocus-533	205	35	the	the	DET
finefocus-533	205	36	sample	sample	NOUN
finefocus-533	205	37	groups	group	NOUN
finefocus-533	205	38	and	and	CCONJ
finefocus-533	205	39	are	be	AUX
finefocus-533	205	40	likely	likely	ADJ
finefocus-533	205	41	ecosystem	ecosystem	NOUN
finefocus-533	205	42	biomarkers	biomarker	NOUN
finefocus-533	205	43	.	.	PUNCT
finefocus-533	206	1	due	due	ADP
finefocus-533	206	2	to	to	ADP
finefocus-533	206	3	budgetary	budgetary	ADJ
finefocus-533	206	4	limitations	limitation	NOUN
finefocus-533	206	5	,	,	PUNCT
finefocus-533	206	6	biological	biological	ADJ
finefocus-533	206	7	replicates	replicate	NOUN
finefocus-533	206	8	from	from	ADP
finefocus-533	206	9	three	three	NUM
finefocus-533	206	10	triangulated	triangulate	VERB
finefocus-533	206	11	sediment	sediment	NOUN
finefocus-533	206	12	samples	sample	NOUN
finefocus-533	206	13	for	for	ADP
finefocus-533	206	14	each	each	DET
finefocus-533	206	15	location	location	NOUN
finefocus-533	206	16	were	be	AUX
finefocus-533	206	17	pooled	pool	VERB
finefocus-533	206	18	prior	prior	ADV
finefocus-533	206	19	to	to	ADP
finefocus-533	206	20	pcr	pcr	PROPN
finefocus-533	206	21	.	.	PUNCT
finefocus-533	207	1	this	this	DET
finefocus-533	207	2	technique	technique	NOUN
finefocus-533	207	3	has	have	AUX
finefocus-533	207	4	been	be	AUX
finefocus-533	207	5	demonstrated	demonstrate	VERB
finefocus-533	207	6	to	to	PART
finefocus-533	207	7	often	often	ADV
finefocus-533	207	8	miss	miss	VERB
finefocus-533	207	9	locally	locally	ADV
finefocus-533	207	10	rare	rare	ADJ
finefocus-533	207	11	prokaryotes	prokaryote	NOUN
finefocus-533	207	12	,	,	PUNCT
finefocus-533	207	13	but	but	CCONJ
finefocus-533	207	14	yielded	yield	VERB
finefocus-533	207	15	spatially	spatially	ADV
finefocus-533	207	16	ubiquitous	ubiquitous	ADJ
finefocus-533	207	17	phylotypes	phylotype	NOUN
finefocus-533	207	18	at	at	ADP
finefocus-533	207	19	higher	high	ADJ
finefocus-533	207	20	taxonomic	taxonomic	ADJ
finefocus-533	207	21	classifications	classification	NOUN
finefocus-533	207	22	(	(	PUNCT
finefocus-533	207	23	30	30	NUM
finefocus-533	207	24	)	)	PUNCT
finefocus-533	207	25	,	,	PUNCT
finefocus-533	207	26	which	which	PRON
finefocus-533	207	27	was	be	AUX
finefocus-533	207	28	our	our	PRON
finefocus-533	207	29	aim	aim	NOUN
finefocus-533	207	30	.	.	PUNCT
finefocus-533	208	1	future	future	ADJ
finefocus-533	208	2	examination	examination	NOUN
finefocus-533	208	3	of	of	ADP
finefocus-533	208	4	the	the	DET
finefocus-533	208	5	microbial	microbial	ADJ
finefocus-533	208	6	populations	population	NOUN
finefocus-533	208	7	at	at	ADP
finefocus-533	208	8	this	this	DET
finefocus-533	208	9	project	project	NOUN
finefocus-533	208	10	site	site	NOUN
finefocus-533	208	11	should	should	AUX
finefocus-533	208	12	address	address	VERB
finefocus-533	208	13	this	this	DET
finefocus-533	208	14	issue	issue	NOUN
finefocus-533	208	15	through	through	ADP
finefocus-533	208	16	use	use	NOUN
finefocus-533	208	17	of	of	ADP
finefocus-533	208	18	true	true	ADJ
finefocus-533	208	19	biological	biological	ADJ
finefocus-533	208	20	and	and	CCONJ
finefocus-533	208	21	technical	technical	ADJ
finefocus-533	208	22	replicates	replicate	NOUN
finefocus-533	208	23	.	.	PUNCT
finefocus-533	209	1	a	a	DET
finefocus-533	209	2	series	series	NOUN
finefocus-533	209	3	of	of	ADP
finefocus-533	209	4	replicates	replicate	NOUN
finefocus-533	209	5	combined	combine	VERB
finefocus-533	209	6	with	with	ADP
finefocus-533	209	7	deeper	deep	ADJ
finefocus-533	209	8	sequencing	sequencing	NOUN
finefocus-533	209	9	will	will	AUX
finefocus-533	209	10	shed	shed	VERB
finefocus-533	209	11	light	light	NOUN
finefocus-533	209	12	on	on	ADP
finefocus-533	209	13	the	the	DET
finefocus-533	209	14	role	role	NOUN
finefocus-533	209	15	of	of	ADP
finefocus-533	209	16	rare	rare	ADJ
finefocus-533	209	17	microbial	microbial	ADJ
finefocus-533	209	18	community	community	NOUN
finefocus-533	209	19	members	member	NOUN
finefocus-533	209	20	on	on	ADP
finefocus-533	209	21	dynamic	dynamic	ADJ
finefocus-533	209	22	interactions	interaction	NOUN
finefocus-533	209	23	as	as	ADV
finefocus-533	209	24	well	well	ADV
finefocus-533	209	25	as	as	ADP
finefocus-533	209	26	provide	provide	VERB
finefocus-533	209	27	us	we	PRON
finefocus-533	209	28	with	with	ADP
finefocus-533	209	29	a	a	DET
finefocus-533	209	30	better	well	ADJ
finefocus-533	209	31	idea	idea	NOUN
finefocus-533	209	32	of	of	ADP
finefocus-533	209	33	spatial	spatial	ADJ
finefocus-533	209	34	niches	niche	NOUN
finefocus-533	209	35	(	(	PUNCT
finefocus-533	209	36	2	2	NUM
finefocus-533	209	37	,	,	PUNCT
finefocus-533	209	38	35	35	NUM
finefocus-533	209	39	)	)	PUNCT
finefocus-533	209	40	.	.	PUNCT
finefocus-533	210	1	additionally	additionally	ADV
finefocus-533	210	2	,	,	PUNCT
finefocus-533	210	3	we	we	PRON
finefocus-533	210	4	are	be	AUX
finefocus-533	210	5	interested	interested	ADJ
finefocus-533	210	6	in	in	ADP
finefocus-533	210	7	how	how	SCONJ
finefocus-533	210	8	seasonal	seasonal	ADJ
finefocus-533	210	9	changes	change	NOUN
finefocus-533	210	10	may	may	AUX
finefocus-533	210	11	affect	affect	VERB
finefocus-533	210	12	the	the	DET
finefocus-533	210	13	taxonomic	taxonomic	ADJ
finefocus-533	210	14	profile	profile	NOUN
finefocus-533	210	15	of	of	ADP
finefocus-533	210	16	the	the	DET
finefocus-533	210	17	sampling	sample	VERB
finefocus-533	210	18	sites	site	NOUN
finefocus-533	210	19	.	.	PUNCT
finefocus-533	211	1	we	we	PRON
finefocus-533	211	2	hypothesize	hypothesize	VERB
finefocus-533	211	3	that	that	SCONJ
finefocus-533	211	4	microbial	microbial	ADJ
finefocus-533	211	5	community	community	NOUN
finefocus-533	211	6	composition	composition	NOUN
finefocus-533	211	7	will	will	AUX
finefocus-533	211	8	be	be	AUX
finefocus-533	211	9	correlated	correlate	VERB
finefocus-533	211	10	with	with	ADP
finefocus-533	211	11	geochemical	geochemical	ADJ
finefocus-533	211	12	variables	variable	NOUN
finefocus-533	211	13	including	include	VERB
finefocus-533	211	14	ph	ph	ADJ
finefocus-533	211	15	and	and	CCONJ
finefocus-533	211	16	metal	metal	NOUN
finefocus-533	211	17	concentrations	concentration	NOUN
finefocus-533	211	18	as	as	SCONJ
finefocus-533	211	19	flow	flow	NOUN
finefocus-533	211	20	rates	rate	NOUN
finefocus-533	211	21	drop	drop	VERB
finefocus-533	211	22	during	during	ADP
finefocus-533	211	23	the	the	DET
finefocus-533	211	24	late	late	ADJ
finefocus-533	211	25	summer	summer	NOUN
finefocus-533	211	26	/	/	SYM
finefocus-533	211	27	early	early	ADJ
finefocus-533	211	28	fall	fall	NOUN
finefocus-533	211	29	as	as	SCONJ
finefocus-533	211	30	has	have	AUX
finefocus-533	211	31	been	be	AUX
finefocus-533	211	32	observed	observe	VERB
finefocus-533	211	33	in	in	ADP
finefocus-533	211	34	other	other	ADJ
finefocus-533	211	35	amd	amd	ADJ
finefocus-533	211	36	studies	study	NOUN
finefocus-533	211	37	(	(	PUNCT
finefocus-533	211	38	1	1	NUM
finefocus-533	211	39	)	)	PUNCT
finefocus-533	211	40	.	.	PUNCT
finefocus-533	212	1	likewise	likewise	ADV
finefocus-533	212	2	,	,	PUNCT
finefocus-533	212	3	temperature	temperature	NOUN
finefocus-533	212	4	fluctuation	fluctuation	NOUN
finefocus-533	212	5	and	and	CCONJ
finefocus-533	212	6	changes	change	NOUN
finefocus-533	212	7	in	in	ADP
finefocus-533	212	8	dissolved	dissolve	VERB
finefocus-533	212	9	oxygen	oxygen	NOUN
finefocus-533	212	10	levels	level	NOUN
finefocus-533	212	11	during	during	ADP
finefocus-533	212	12	the	the	DET
finefocus-533	212	13	winter	winter	NOUN
finefocus-533	212	14	in	in	ADP
finefocus-533	212	15	this	this	DET
finefocus-533	212	16	high	high	ADJ
finefocus-533	212	17	-	-	PUNCT
finefocus-533	212	18	elevation	elevation	NOUN
finefocus-533	212	19	,	,	PUNCT
finefocus-533	212	20	alpine	alpine	PROPN
finefocus-533	212	21	environment	environment	PROPN
finefocus-533	212	22	will	will	AUX
finefocus-533	212	23	likely	likely	ADV
finefocus-533	212	24	drive	drive	VERB
finefocus-533	212	25	changes	change	NOUN
finefocus-533	212	26	in	in	ADP
finefocus-533	212	27	the	the	DET
finefocus-533	212	28	taxonomic	taxonomic	ADJ
finefocus-533	212	29	profile	profile	NOUN
finefocus-533	212	30	due	due	ADP
finefocus-533	212	31	to	to	ADP
finefocus-533	212	32	reduced	reduce	VERB
finefocus-533	212	33	photosynthetic	photosynthetic	ADJ
finefocus-533	212	34	activity	activity	NOUN
finefocus-533	212	35	and	and	CCONJ
finefocus-533	212	36	diffusion	diffusion	NOUN
finefocus-533	212	37	from	from	ADP
finefocus-533	212	38	the	the	DET
finefocus-533	212	39	atmosphere	atmosphere	NOUN
finefocus-533	212	40	resulting	result	VERB
finefocus-533	212	41	from	from	ADP
finefocus-533	212	42	ice	ice	NOUN
finefocus-533	212	43	and	and	CCONJ
finefocus-533	212	44	snow	snow	NOUN
finefocus-533	212	45	that	that	PRON
finefocus-533	212	46	cover	cover	VERB
finefocus-533	212	47	the	the	DET
finefocus-533	212	48	constructed	constructed	ADJ
finefocus-533	212	49	wetland	wetland	NOUN
finefocus-533	212	50	cells	cell	NOUN
finefocus-533	212	51	.	.	PUNCT
finefocus-533	213	1	taxonomic	taxonomic	ADJ
finefocus-533	213	2	resolution	resolution	NOUN
finefocus-533	213	3	is	be	AUX
finefocus-533	213	4	also	also	ADV
finefocus-533	213	5	a	a	DET
finefocus-533	213	6	limiting	limit	VERB
finefocus-533	213	7	factor	factor	NOUN
finefocus-533	213	8	in	in	ADP
finefocus-533	213	9	our	our	PRON
finefocus-533	213	10	study	study	NOUN
finefocus-533	213	11	.	.	PUNCT
finefocus-533	214	1	we	we	PRON
finefocus-533	214	2	used	use	VERB
finefocus-533	214	3	the	the	DET
finefocus-533	214	4	v4	v4	NOUN
finefocus-533	214	5	hypervariability	hypervariability	NOUN
finefocus-533	214	6	region	region	NOUN
finefocus-533	214	7	of	of	ADP
finefocus-533	214	8	the	the	DET
finefocus-533	214	9	ssu	ssu	PROPN
finefocus-533	214	10	16s	16s	PROPN
finefocus-533	214	11	rrna	rrna	PROPN
finefocus-533	214	12	gene	gene	NOUN
finefocus-533	214	13	(	(	PUNCT
finefocus-533	214	14	8)	8)	NUM
finefocus-533	214	15	with	with	ADP
finefocus-533	214	16	our	our	PRON
finefocus-533	214	17	miseq	miseq	NOUN
finefocus-533	214	18	run	run	VERB
finefocus-533	214	19	with	with	ADP
finefocus-533	214	20	paired	pair	VERB
finefocus-533	214	21	-	-	PUNCT
finefocus-533	214	22	end	end	NOUN
finefocus-533	214	23	(	(	PUNCT
finefocus-533	214	24	pe	pe	INTJ
finefocus-533	214	25	)	)	PUNCT
finefocus-533	214	26	150	150	NUM
finefocus-533	214	27	bp	bp	PROPN
finefocus-533	214	28	reads	read	NOUN
finefocus-533	214	29	that	that	PRON
finefocus-533	214	30	provided	provide	VERB
finefocus-533	214	31	48	48	NUM
finefocus-533	214	32	bp	bp	PROPN
finefocus-533	214	33	overlap	overlap	NOUN
finefocus-533	214	34	.	.	PUNCT
finefocus-533	215	1	although	although	SCONJ
finefocus-533	215	2	sufficient	sufficient	ADJ
finefocus-533	215	3	for	for	ADP
finefocus-533	215	4	pairing	pair	VERB
finefocus-533	215	5	reads	read	NOUN
finefocus-533	215	6	to	to	ADP
finefocus-533	215	7	spanning	span	VERB
finefocus-533	215	8	the	the	DET
finefocus-533	215	9	252	252	NUM
finefocus-533	215	10	bp	bp	PROPN
finefocus-533	215	11	v4	v4	PROPN
finefocus-533	215	12	hypervariability	hypervariability	NOUN
finefocus-533	215	13	region	region	NOUN
finefocus-533	215	14	,	,	PUNCT
finefocus-533	215	15	we	we	PRON
finefocus-533	215	16	would	would	AUX
finefocus-533	215	17	expect	expect	VERB
finefocus-533	215	18	to	to	PART
finefocus-533	215	19	increase	increase	VERB
finefocus-533	215	20	taxonomic	taxonomic	ADJ
finefocus-533	215	21	resolution	resolution	NOUN
finefocus-533	215	22	by	by	ADP
finefocus-533	215	23	sequencing	sequence	VERB
finefocus-533	215	24	with	with	ADP
finefocus-533	215	25	longer	long	ADJ
finefocus-533	215	26	pe	pe	PROPN
finefocus-533	215	27	reads	read	NOUN
finefocus-533	215	28	(	(	PUNCT
finefocus-533	215	29	250	250	NUM
finefocus-533	215	30	+	+	CCONJ
finefocus-533	215	31	bp	bp	NOUN
finefocus-533	215	32	)	)	PUNCT
finefocus-533	215	33	,	,	PUNCT
finefocus-533	215	34	which	which	PRON
finefocus-533	215	35	would	would	AUX
finefocus-533	215	36	retain	retain	VERB
finefocus-533	215	37	a	a	DET
finefocus-533	215	38	greater	great	ADJ
finefocus-533	215	39	percentage	percentage	NOUN
finefocus-533	215	40	of	of	ADP
finefocus-533	215	41	reads	read	NOUN
finefocus-533	215	42	by	by	ADP
finefocus-533	215	43	boosting	boost	VERB
finefocus-533	215	44	quality	quality	NOUN
finefocus-533	215	45	through	through	ADP
finefocus-533	215	46	full	full	ADJ
finefocus-533	215	47	overlap	overlap	NOUN
finefocus-533	215	48	of	of	ADP
finefocus-533	215	49	61applied	61applied	NUM
finefocus-533	215	50	&	&	CCONJ
finefocus-533	215	51	environmental	environmental	ADJ
finefocus-533	215	52	microbiology	microbiology	NOUN
finefocus-533	215	53	•	•	ADP
finefocus-533	215	54	the	the	DET
finefocus-533	215	55	v4	v4	NOUN
finefocus-533	215	56	hypervariability	hypervariability	NOUN
finefocus-533	215	57	region	region	NOUN
finefocus-533	215	58	.	.	PUNCT
finefocus-533	216	1	alternatively	alternatively	ADV
finefocus-533	216	2	,	,	PUNCT
finefocus-533	216	3	longer	long	ADV
finefocus-533	216	4	reads	read	NOUN
finefocus-533	216	5	could	could	AUX
finefocus-533	216	6	be	be	AUX
finefocus-533	216	7	used	use	VERB
finefocus-533	216	8	with	with	ADP
finefocus-533	216	9	a	a	DET
finefocus-533	216	10	new	new	ADJ
finefocus-533	216	11	primer	primer	NOUN
finefocus-533	216	12	set	set	VERB
finefocus-533	216	13	constructed	construct	VERB
finefocus-533	216	14	to	to	PART
finefocus-533	216	15	span	span	VERB
finefocus-533	216	16	both	both	CCONJ
finefocus-533	216	17	the	the	DET
finefocus-533	216	18	v3	v3	PROPN
finefocus-533	216	19	and	and	CCONJ
finefocus-533	216	20	v4	v4	NOUN
finefocus-533	216	21	hypervariability	hypervariability	NOUN
finefocus-533	216	22	regions	region	NOUN
finefocus-533	216	23	for	for	ADP
finefocus-533	216	24	longer	long	ADJ
finefocus-533	216	25	pe	pe	PROPN
finefocus-533	216	26	reads	read	VERB
finefocus-533	216	27	to	to	PART
finefocus-533	216	28	increase	increase	VERB
finefocus-533	216	29	the	the	DET
finefocus-533	216	30	data	datum	NOUN
finefocus-533	216	31	set	set	VERB
finefocus-533	216	32	size	size	NOUN
finefocus-533	216	33	and	and	CCONJ
finefocus-533	216	34	resolution	resolution	NOUN
finefocus-533	216	35	(	(	PUNCT
finefocus-533	216	36	17	17	NUM
finefocus-533	216	37	)	)	PUNCT
finefocus-533	216	38	.	.	PUNCT
finefocus-533	217	1	either	either	CCONJ
finefocus-533	217	2	approach	approach	NOUN
finefocus-533	217	3	(	(	PUNCT
finefocus-533	217	4	increased	increase	VERB
finefocus-533	217	5	quality	quality	NOUN
finefocus-533	217	6	or	or	CCONJ
finefocus-533	217	7	amount	amount	NOUN
finefocus-533	217	8	of	of	ADP
finefocus-533	217	9	data	datum	NOUN
finefocus-533	217	10	)	)	PUNCT
finefocus-533	217	11	,	,	PUNCT
finefocus-533	217	12	obtained	obtain	VERB
finefocus-533	217	13	with	with	ADP
finefocus-533	217	14	miseq	miseq	NOUN
finefocus-533	217	15	pe	pe	ADP
finefocus-533	217	16	250	250	NUM
finefocus-533	217	17	+	+	NUM
finefocus-533	217	18	bp	bp	PROPN
finefocus-533	217	19	reads	read	NOUN
finefocus-533	217	20	would	would	AUX
finefocus-533	217	21	likely	likely	ADV
finefocus-533	217	22	provide	provide	VERB
finefocus-533	217	23	a	a	DET
finefocus-533	217	24	desired	desire	VERB
finefocus-533	217	25	data	datum	NOUN
finefocus-533	217	26	set	set	VERB
finefocus-533	217	27	through	through	ADP
finefocus-533	217	28	more	more	ADV
finefocus-533	217	29	accurate	accurate	ADJ
finefocus-533	217	30	clustering	clustering	NOUN
finefocus-533	217	31	,	,	PUNCT
finefocus-533	217	32	assignment	assignment	NOUN
finefocus-533	217	33	of	of	ADP
finefocus-533	217	34	taxonomy	taxonomy	NOUN
finefocus-533	217	35	,	,	PUNCT
finefocus-533	217	36	and	and	CCONJ
finefocus-533	217	37	generation	generation	NOUN
finefocus-533	217	38	of	of	ADP
finefocus-533	217	39	a	a	DET
finefocus-533	217	40	more	more	ADV
finefocus-533	217	41	accurate	accurate	ADJ
finefocus-533	217	42	phylogenetic	phylogenetic	ADJ
finefocus-533	217	43	tree	tree	NOUN
finefocus-533	217	44	(	(	PUNCT
finefocus-533	217	45	46	46	NUM
finefocus-533	217	46	)	)	PUNCT
finefocus-533	217	47	.	.	PUNCT
finefocus-533	218	1	biases	bias	NOUN
finefocus-533	218	2	that	that	PRON
finefocus-533	218	3	should	should	AUX
finefocus-533	218	4	be	be	AUX
finefocus-533	218	5	considered	consider	VERB
finefocus-533	218	6	when	when	SCONJ
finefocus-533	218	7	interpreting	interpret	VERB
finefocus-533	218	8	our	our	PRON
finefocus-533	218	9	data	datum	NOUN
finefocus-533	218	10	include	include	VERB
finefocus-533	218	11	limitations	limitation	NOUN
finefocus-533	218	12	of	of	ADP
finefocus-533	218	13	using	use	VERB
finefocus-533	218	14	a	a	DET
finefocus-533	218	15	single	single	ADJ
finefocus-533	218	16	marker	marker	NOUN
finefocus-533	218	17	gene	gene	NOUN
finefocus-533	218	18	for	for	ADP
finefocus-533	218	19	inferring	infer	VERB
finefocus-533	218	20	phylogeny	phylogeny	NOUN
finefocus-533	218	21	,	,	PUNCT
finefocus-533	218	22	in	in	ADP
finefocus-533	218	23	addition	addition	NOUN
finefocus-533	218	24	to	to	ADP
finefocus-533	218	25	biases	bias	NOUN
finefocus-533	218	26	introduced	introduce	VERB
finefocus-533	218	27	during	during	ADP
finefocus-533	218	28	pcr	pcr	PROPN
finefocus-533	218	29	.	.	PUNCT
finefocus-533	219	1	the	the	DET
finefocus-533	219	2	ssu	ssu	PROPN
finefocus-533	219	3	16s	16s	PROPN
finefocus-533	219	4	rrna	rrna	PROPN
finefocus-533	219	5	gene	gene	NOUN
finefocus-533	219	6	is	be	AUX
finefocus-533	219	7	a	a	DET
finefocus-533	219	8	well	well	ADV
finefocus-533	219	9	-	-	PUNCT
finefocus-533	219	10	documented	document	VERB
finefocus-533	219	11	marker	marker	NOUN
finefocus-533	219	12	gene	gene	NOUN
finefocus-533	219	13	and	and	CCONJ
finefocus-533	219	14	has	have	VERB
finefocus-533	219	15	extensive	extensive	ADJ
finefocus-533	219	16	database	database	NOUN
finefocus-533	219	17	records	record	NOUN
finefocus-533	219	18	to	to	PART
finefocus-533	219	19	associate	associate	VERB
finefocus-533	219	20	with	with	ADP
finefocus-533	219	21	the	the	DET
finefocus-533	219	22	data	datum	NOUN
finefocus-533	219	23	,	,	PUNCT
finefocus-533	219	24	but	but	CCONJ
finefocus-533	219	25	is	be	AUX
finefocus-533	219	26	likely	likely	ADJ
finefocus-533	219	27	not	not	PART
finefocus-533	219	28	always	always	ADV
finefocus-533	219	29	the	the	DET
finefocus-533	219	30	best	good	ADJ
finefocus-533	219	31	measure	measure	NOUN
finefocus-533	219	32	of	of	ADP
finefocus-533	219	33	phylogeny	phylogeny	NOUN
finefocus-533	219	34	between	between	ADP
finefocus-533	219	35	all	all	DET
finefocus-533	219	36	organisms	organism	NOUN
finefocus-533	219	37	.	.	PUNCT
finefocus-533	220	1	pcr	pcr	ADJ
finefocus-533	220	2	primer	primer	NOUN
finefocus-533	220	3	binding	bind	VERB
finefocus-533	220	4	fidelity	fidelity	NOUN
finefocus-533	220	5	and	and	CCONJ
finefocus-533	220	6	the	the	DET
finefocus-533	220	7	stochastic	stochastic	ADJ
finefocus-533	220	8	processes	process	NOUN
finefocus-533	220	9	that	that	PRON
finefocus-533	220	10	occur	occur	VERB
finefocus-533	220	11	early	early	ADV
finefocus-533	220	12	during	during	ADP
finefocus-533	220	13	amplification	amplification	NOUN
finefocus-533	220	14	can	can	AUX
finefocus-533	220	15	introduce	introduce	VERB
finefocus-533	220	16	biases	bias	NOUN
finefocus-533	220	17	in	in	ADP
finefocus-533	220	18	the	the	DET
finefocus-533	220	19	amplicons	amplicon	NOUN
finefocus-533	220	20	produced	produce	VERB
finefocus-533	220	21	to	to	PART
finefocus-533	220	22	be	be	AUX
finefocus-533	220	23	sequenced	sequence	VERB
finefocus-533	220	24	(	(	PUNCT
finefocus-533	220	25	36	36	NUM
finefocus-533	220	26	)	)	PUNCT
finefocus-533	220	27	.	.	PUNCT
finefocus-533	221	1	pcr	pcr	ADJ
finefocus-533	221	2	enzyme	enzyme	NOUN
finefocus-533	221	3	choice	choice	NOUN
finefocus-533	221	4	also	also	ADV
finefocus-533	221	5	has	have	AUX
finefocus-533	221	6	been	be	AUX
finefocus-533	221	7	demonstrated	demonstrate	VERB
finefocus-533	221	8	to	to	PART
finefocus-533	221	9	effect	effect	VERB
finefocus-533	221	10	accuracy	accuracy	NOUN
finefocus-533	221	11	of	of	ADP
finefocus-533	221	12	microbial	microbial	ADJ
finefocus-533	221	13	community	community	NOUN
finefocus-533	221	14	profiling	profiling	NOUN
finefocus-533	221	15	(	(	PUNCT
finefocus-533	221	16	19	19	NUM
finefocus-533	221	17	)	)	PUNCT
finefocus-533	221	18	.	.	PUNCT
finefocus-533	222	1	future	future	ADJ
finefocus-533	222	2	studies	study	NOUN
finefocus-533	222	3	could	could	AUX
finefocus-533	222	4	address	address	VERB
finefocus-533	222	5	these	these	DET
finefocus-533	222	6	limitations	limitation	NOUN
finefocus-533	222	7	by	by	ADP
finefocus-533	222	8	taking	take	VERB
finefocus-533	222	9	a	a	DET
finefocus-533	222	10	true	true	ADJ
finefocus-533	222	11	shotgun	shotgun	NOUN
finefocus-533	222	12	metagenomic	metagenomic	ADJ
finefocus-533	222	13	approach	approach	NOUN
finefocus-533	222	14	to	to	ADP
finefocus-533	222	15	community	community	NOUN
finefocus-533	222	16	dna	dna	PROPN
finefocus-533	222	17	analysis	analysis	NOUN
finefocus-533	222	18	.	.	PUNCT
finefocus-533	223	1	not	not	PART
finefocus-533	223	2	only	only	ADV
finefocus-533	223	3	would	would	AUX
finefocus-533	223	4	this	this	DET
finefocus-533	223	5	approach	approach	NOUN
finefocus-533	223	6	provide	provide	VERB
finefocus-533	223	7	taxonomic	taxonomic	ADJ
finefocus-533	223	8	information	information	NOUN
finefocus-533	223	9	through	through	ADP
finefocus-533	223	10	the	the	DET
finefocus-533	223	11	combination	combination	NOUN
finefocus-533	223	12	of	of	ADP
finefocus-533	223	13	multiple	multiple	ADJ
finefocus-533	223	14	marker	marker	NOUN
finefocus-533	223	15	genes	gene	NOUN
finefocus-533	223	16	,	,	PUNCT
finefocus-533	223	17	but	but	CCONJ
finefocus-533	223	18	it	it	PRON
finefocus-533	223	19	would	would	AUX
finefocus-533	223	20	also	also	ADV
finefocus-533	223	21	provide	provide	VERB
finefocus-533	223	22	us	we	PRON
finefocus-533	223	23	with	with	ADP
finefocus-533	223	24	information	information	NOUN
finefocus-533	223	25	on	on	ADP
finefocus-533	223	26	the	the	DET
finefocus-533	223	27	functional	functional	ADJ
finefocus-533	223	28	potential	potential	NOUN
finefocus-533	223	29	of	of	ADP
finefocus-533	223	30	the	the	DET
finefocus-533	223	31	microbes	microbe	NOUN
finefocus-533	223	32	within	within	ADP
finefocus-533	223	33	the	the	DET
finefocus-533	223	34	ecosystem	ecosystem	NOUN
finefocus-533	223	35	(	(	PUNCT
finefocus-533	223	36	14	14	NUM
finefocus-533	223	37	)	)	PUNCT
finefocus-533	223	38	.	.	PUNCT
finefocus-533	224	1	for	for	ADP
finefocus-533	224	2	future	future	ADJ
finefocus-533	224	3	study	study	NOUN
finefocus-533	224	4	,	,	PUNCT
finefocus-533	224	5	we	we	PRON
finefocus-533	224	6	are	be	AUX
finefocus-533	224	7	interested	interested	ADJ
finefocus-533	224	8	in	in	ADP
finefocus-533	224	9	investigating	investigate	VERB
finefocus-533	224	10	the	the	DET
finefocus-533	224	11	taxonomic	taxonomic	ADJ
finefocus-533	224	12	composition	composition	NOUN
finefocus-533	224	13	of	of	ADP
finefocus-533	224	14	biofilms	biofilm	NOUN
finefocus-533	224	15	found	find	VERB
finefocus-533	224	16	within	within	ADP
finefocus-533	224	17	the	the	DET
finefocus-533	224	18	solomon	solomon	PROPN
finefocus-533	224	19	mine	mine	PROPN
finefocus-533	224	20	adit	adit	NOUN
finefocus-533	224	21	in	in	ADP
finefocus-533	224	22	addition	addition	NOUN
finefocus-533	224	23	to	to	ADP
finefocus-533	224	24	looking	look	VERB
finefocus-533	224	25	at	at	ADP
finefocus-533	224	26	differences	difference	NOUN
finefocus-533	224	27	between	between	ADP
finefocus-533	224	28	amd	amd	ADJ
finefocus-533	224	29	microbial	microbial	ADJ
finefocus-533	224	30	communities	community	NOUN
finefocus-533	224	31	within	within	ADP
finefocus-533	224	32	the	the	DET
finefocus-533	224	33	adit	adit	NOUN
finefocus-533	224	34	(	(	PUNCT
finefocus-533	224	35	no	no	DET
finefocus-533	224	36	light	light	NOUN
finefocus-533	224	37	or	or	CCONJ
finefocus-533	224	38	source	source	NOUN
finefocus-533	224	39	of	of	ADP
finefocus-533	224	40	significant	significant	ADJ
finefocus-533	224	41	organic	organic	ADJ
finefocus-533	224	42	matter	matter	NOUN
finefocus-533	224	43	)	)	PUNCT
finefocus-533	224	44	to	to	ADP
finefocus-533	224	45	those	those	PRON
finefocus-533	224	46	directly	directly	ADV
finefocus-533	224	47	towards	towards	ADP
finefocus-533	224	48	the	the	DET
finefocus-533	224	49	end	end	NOUN
finefocus-533	224	50	of	of	ADP
finefocus-533	224	51	the	the	DET
finefocus-533	224	52	first	first	ADJ
finefocus-533	224	53	constructed	construct	VERB
finefocus-533	224	54	wetland	wetland	NOUN
finefocus-533	224	55	cell	cell	NOUN
finefocus-533	224	56	(	(	PUNCT
finefocus-533	224	57	exposed	expose	VERB
finefocus-533	224	58	to	to	ADP
finefocus-533	224	59	light	light	NOUN
finefocus-533	224	60	with	with	ADP
finefocus-533	224	61	organic	organic	ADJ
finefocus-533	224	62	matter	matter	NOUN
finefocus-533	224	63	)	)	PUNCT
finefocus-533	224	64	.	.	PUNCT
finefocus-533	225	1	we	we	PRON
finefocus-533	225	2	hypothesize	hypothesize	VERB
finefocus-533	225	3	that	that	SCONJ
finefocus-533	225	4	phototrophs	phototroph	NOUN
finefocus-533	225	5	may	may	AUX
finefocus-533	225	6	play	play	VERB
finefocus-533	225	7	a	a	DET
finefocus-533	225	8	larger	large	ADJ
finefocus-533	225	9	role	role	NOUN
finefocus-533	225	10	in	in	ADP
finefocus-533	225	11	generating	generate	VERB
finefocus-533	225	12	organic	organic	ADJ
finefocus-533	225	13	matter	matter	NOUN
finefocus-533	225	14	,	,	PUNCT
finefocus-533	225	15	while	while	SCONJ
finefocus-533	225	16	chemolithotrophs	chemolithotroph	NOUN
finefocus-533	225	17	are	be	AUX
finefocus-533	225	18	likely	likely	ADJ
finefocus-533	225	19	to	to	PART
finefocus-533	225	20	have	have	VERB
finefocus-533	225	21	a	a	DET
finefocus-533	225	22	reduced	reduce	VERB
finefocus-533	225	23	role	role	NOUN
finefocus-533	225	24	in	in	ADP
finefocus-533	225	25	the	the	DET
finefocus-533	225	26	bioremediation	bioremediation	NOUN
finefocus-533	225	27	cells	cell	NOUN
finefocus-533	225	28	considering	consider	VERB
finefocus-533	225	29	the	the	DET
finefocus-533	225	30	more	more	ADV
finefocus-533	225	31	abundant	abundant	ADJ
finefocus-533	225	32	environmental	environmental	ADJ
finefocus-533	225	33	oxygen	oxygen	NOUN
finefocus-533	225	34	and	and	CCONJ
finefocus-533	225	35	nitrogen	nitrogen	NOUN
finefocus-533	225	36	sources	source	NOUN
finefocus-533	225	37	from	from	ADP
finefocus-533	225	38	organic	organic	ADJ
finefocus-533	225	39	debris	debris	NOUN
finefocus-533	225	40	present	present	ADJ
finefocus-533	225	41	in	in	ADP
finefocus-533	225	42	those	those	DET
finefocus-533	225	43	cells	cell	NOUN
finefocus-533	225	44	.	.	PUNCT
finefocus-533	226	1	to	to	PART
finefocus-533	226	2	gain	gain	VERB
finefocus-533	226	3	insight	insight	NOUN
finefocus-533	226	4	into	into	ADP
finefocus-533	226	5	the	the	DET
finefocus-533	226	6	ecological	ecological	ADJ
finefocus-533	226	7	role	role	NOUN
finefocus-533	226	8	of	of	ADP
finefocus-533	226	9	these	these	DET
finefocus-533	226	10	microbes	microbe	NOUN
finefocus-533	226	11	,	,	PUNCT
finefocus-533	226	12	we	we	PRON
finefocus-533	226	13	plan	plan	VERB
finefocus-533	226	14	to	to	PART
finefocus-533	226	15	correlate	correlate	VERB
finefocus-533	226	16	microbe	microbe	ADJ
finefocus-533	226	17	presence	presence	NOUN
finefocus-533	226	18	with	with	ADP
finefocus-533	226	19	dissolved	dissolve	VERB
finefocus-533	226	20	oxygen	oxygen	NOUN
finefocus-533	226	21	levels	level	NOUN
finefocus-533	226	22	and	and	CCONJ
finefocus-533	226	23	sources	source	NOUN
finefocus-533	226	24	of	of	ADP
finefocus-533	226	25	carbon	carbon	NOUN
finefocus-533	226	26	and	and	CCONJ
finefocus-533	226	27	nitrogen	nitrogen	NOUN
finefocus-533	226	28	.	.	PUNCT
finefocus-533	227	1	further	further	ADJ
finefocus-533	227	2	shotgun	shotgun	VERB
finefocus-533	227	3	metagenomic	metagenomic	ADJ
finefocus-533	227	4	analysis	analysis	NOUN
finefocus-533	227	5	could	could	AUX
finefocus-533	227	6	also	also	ADV
finefocus-533	227	7	reveal	reveal	VERB
finefocus-533	227	8	the	the	DET
finefocus-533	227	9	relative	relative	ADJ
finefocus-533	227	10	abundance	abundance	NOUN
finefocus-533	227	11	of	of	ADP
finefocus-533	227	12	pathways	pathway	NOUN
finefocus-533	227	13	for	for	ADP
finefocus-533	227	14	carbon	carbon	NOUN
finefocus-533	227	15	,	,	PUNCT
finefocus-533	227	16	nitrogen	nitrogen	NOUN
finefocus-533	227	17	fixation	fixation	NOUN
finefocus-533	227	18	,	,	PUNCT
finefocus-533	227	19	and	and	CCONJ
finefocus-533	227	20	energy	energy	NOUN
finefocus-533	227	21	generation	generation	NOUN
finefocus-533	227	22	expected	expect	VERB
finefocus-533	227	23	for	for	ADP
finefocus-533	227	24	this	this	DET
finefocus-533	227	25	extreme	extreme	ADJ
finefocus-533	227	26	environment	environment	NOUN
finefocus-533	227	27	.	.	PUNCT
finefocus-533	228	1	association	association	NOUN
finefocus-533	228	2	of	of	ADP
finefocus-533	228	3	these	these	DET
finefocus-533	228	4	geochemical	geochemical	ADJ
finefocus-533	228	5	parameters	parameter	NOUN
finefocus-533	228	6	with	with	ADP
finefocus-533	228	7	differentially	differentially	ADV
finefocus-533	228	8	abundant	abundant	ADJ
finefocus-533	228	9	microbes	microbe	NOUN
finefocus-533	228	10	will	will	AUX
finefocus-533	228	11	allow	allow	VERB
finefocus-533	228	12	us	we	PRON
finefocus-533	228	13	to	to	PART
finefocus-533	228	14	understand	understand	VERB
finefocus-533	228	15	symbiotic	symbiotic	ADJ
finefocus-533	228	16	relationships	relationship	NOUN
finefocus-533	228	17	between	between	ADP
finefocus-533	228	18	taxa	taxa	NOUN
finefocus-533	228	19	in	in	ADP
finefocus-533	228	20	such	such	DET
finefocus-533	228	21	an	an	DET
finefocus-533	228	22	ecosystem	ecosystem	NOUN
finefocus-533	228	23	(	(	PUNCT
finefocus-533	228	24	43	43	NUM
finefocus-533	228	25	)	)	PUNCT
finefocus-533	228	26	.	.	PUNCT
finefocus-533	229	1	secondly	secondly	ADV
finefocus-533	229	2	,	,	PUNCT
finefocus-533	229	3	we	we	PRON
finefocus-533	229	4	are	be	AUX
finefocus-533	229	5	interested	interested	ADJ
finefocus-533	229	6	in	in	ADP
finefocus-533	229	7	determining	determine	VERB
finefocus-533	229	8	the	the	DET
finefocus-533	229	9	metagenome	metagenome	NOUN
finefocus-533	229	10	or	or	CCONJ
finefocus-533	229	11	metatranscriptome	metatranscriptome	NOUN
finefocus-533	229	12	of	of	ADP
finefocus-533	229	13	the	the	DET
finefocus-533	229	14	microbes	microbe	NOUN
finefocus-533	229	15	found	find	VERB
finefocus-533	229	16	within	within	ADP
finefocus-533	229	17	constructed	construct	VERB
finefocus-533	229	18	wetland	wetland	NOUN
finefocus-533	229	19	cell	cell	NOUN
finefocus-533	229	20	3	3	NUM
finefocus-533	229	21	to	to	PART
finefocus-533	229	22	better	well	ADV
finefocus-533	229	23	understand	understand	VERB
finefocus-533	229	24	the	the	DET
finefocus-533	229	25	metabolic	metabolic	NOUN
finefocus-533	229	26	potential	potential	NOUN
finefocus-533	229	27	or	or	CCONJ
finefocus-533	229	28	functionality	functionality	NOUN
finefocus-533	229	29	of	of	ADP
finefocus-533	229	30	the	the	DET
finefocus-533	229	31	microbial	microbial	ADJ
finefocus-533	229	32	community	community	NOUN
finefocus-533	229	33	.	.	PUNCT
finefocus-533	230	1	visual	visual	ADJ
finefocus-533	230	2	inspection	inspection	NOUN
finefocus-533	230	3	alone	alone	ADV
finefocus-533	230	4	differentiates	differentiate	VERB
finefocus-533	230	5	the	the	DET
finefocus-533	230	6	cell	cell	NOUN
finefocus-533	230	7	from	from	ADP
finefocus-533	230	8	the	the	DET
finefocus-533	230	9	other	other	ADJ
finefocus-533	230	10	amd	amd	ADJ
finefocus-533	230	11	sampling	sample	VERB
finefocus-533	230	12	location	location	NOUN
finefocus-533	230	13	sites	site	NOUN
finefocus-533	230	14	considering	consider	VERB
finefocus-533	230	15	the	the	DET
finefocus-533	230	16	extensive	extensive	ADJ
finefocus-533	230	17	algal	algal	ADJ
finefocus-533	230	18	growth	growth	NOUN
finefocus-533	230	19	(	(	PUNCT
finefocus-533	230	20	figure	figure	NOUN
finefocus-533	230	21	3	3	NUM
finefocus-533	230	22	)	)	PUNCT
finefocus-533	230	23	and	and	CCONJ
finefocus-533	230	24	the	the	DET
finefocus-533	230	25	water	water	NOUN
finefocus-533	230	26	-	-	PUNCT
finefocus-533	230	27	quality	quality	NOUN
finefocus-533	230	28	measures	measure	NOUN
finefocus-533	230	29	of	of	ADP
finefocus-533	230	30	an	an	DET
finefocus-533	230	31	increase	increase	NOUN
finefocus-533	230	32	in	in	ADP
finefocus-533	230	33	ph	ph	NOUN
finefocus-533	230	34	and	and	CCONJ
finefocus-533	230	35	reduction	reduction	NOUN
finefocus-533	230	36	in	in	ADP
finefocus-533	230	37	conductivity	conductivity	NOUN
finefocus-533	230	38	suggesting	suggest	VERB
finefocus-533	230	39	sulfate	sulfate	NOUN
finefocus-533	230	40	-	-	PUNCT
finefocus-533	230	41	reducing	reduce	VERB
finefocus-533	230	42	bacteria	bacteria	NOUN
finefocus-533	230	43	may	may	AUX
finefocus-533	230	44	be	be	AUX
finefocus-533	230	45	at	at	ADP
finefocus-533	230	46	work	work	NOUN
finefocus-533	230	47	.	.	PUNCT
finefocus-533	231	1	the	the	DET
finefocus-533	231	2	beta	beta	ADJ
finefocus-533	231	3	diversity	diversity	NOUN
finefocus-533	231	4	analysis	analysis	NOUN
finefocus-533	231	5	also	also	ADV
finefocus-533	231	6	indicates	indicate	VERB
finefocus-533	231	7	62•	62•	NUM
finefocus-533	231	8	fine	fine	ADJ
finefocus-533	231	9	focus	focus	NOUN
finefocus-533	231	10	,	,	PUNCT
finefocus-533	231	11	vol	vol	NOUN
finefocus-533	231	12	.	.	PUNCT
finefocus-533	231	13	4(1	4(1	NOUN
finefocus-533	231	14	)	)	PUNCT
finefocus-533	231	15	that	that	SCONJ
finefocus-533	231	16	microbial	microbial	ADJ
finefocus-533	231	17	community	community	NOUN
finefocus-533	231	18	composition	composition	NOUN
finefocus-533	231	19	is	be	AUX
finefocus-533	231	20	significantly	significantly	ADV
finefocus-533	231	21	different	different	ADJ
finefocus-533	231	22	from	from	ADP
finefocus-533	231	23	that	that	PRON
finefocus-533	231	24	of	of	ADP
finefocus-533	231	25	the	the	DET
finefocus-533	231	26	other	other	ADJ
finefocus-533	231	27	amd	amd	PROPN
finefocus-533	231	28	sample	sample	NOUN
finefocus-533	231	29	locations	location	NOUN
finefocus-533	231	30	and	and	CCONJ
finefocus-533	231	31	in	in	ADP
finefocus-533	231	32	ewc	ewc	PROPN
finefocus-533	231	33	.	.	PUNCT
finefocus-533	232	1	in	in	ADP
finefocus-533	232	2	conclusion	conclusion	NOUN
finefocus-533	232	3	,	,	PUNCT
finefocus-533	232	4	further	further	ADJ
finefocus-533	232	5	investigation	investigation	NOUN
finefocus-533	232	6	is	be	AUX
finefocus-533	232	7	necessary	necessary	ADJ
finefocus-533	232	8	to	to	PART
finefocus-533	232	9	determine	determine	VERB
finefocus-533	232	10	if	if	SCONJ
finefocus-533	232	11	current	current	ADJ
finefocus-533	232	12	microbial	microbial	NOUN
finefocus-533	232	13	we	we	PRON
finefocus-533	232	14	thank	thank	VERB
finefocus-533	232	15	the	the	DET
finefocus-533	232	16	adams	adams	PROPN
finefocus-533	232	17	state	state	PROPN
finefocus-533	232	18	university	university	PROPN
finefocus-533	232	19	porter	porter	NOUN
finefocus-533	232	20	scholars	scholar	NOUN
finefocus-533	232	21	in	in	ADP
finefocus-533	232	22	science	science	PROPN
finefocus-533	232	23	&	&	CCONJ
finefocus-533	232	24	mathematics	mathematics	PROPN
finefocus-533	232	25	program	program	NOUN
finefocus-533	232	26	for	for	ADP
finefocus-533	232	27	the	the	DET
finefocus-533	232	28	support	support	NOUN
finefocus-533	232	29	of	of	ADP
finefocus-533	232	30	ryan	ryan	PROPN
finefocus-533	232	31	miller	miller	PROPN
finefocus-533	232	32	.	.	PUNCT
finefocus-533	233	1	gwen	gwen	PROPN
finefocus-533	233	2	nelson	nelson	PROPN
finefocus-533	233	3	,	,	PUNCT
finefocus-533	233	4	watershed	watershe	VERB
finefocus-533	233	5	coordinator	coordinator	NOUN
finefocus-533	233	6	with	with	ADP
finefocus-533	233	7	willow	willow	PROPN
finefocus-533	233	8	creek	creek	PROPN
finefocus-533	233	9	reclamation	reclamation	NOUN
finefocus-533	233	10	committee	committee	NOUN
finefocus-533	233	11	,	,	PUNCT
finefocus-533	233	12	was	be	AUX
finefocus-533	233	13	instrumental	instrumental	ADJ
finefocus-533	233	14	for	for	ADP
finefocus-533	233	15	access	access	NOUN
finefocus-533	233	16	to	to	ADP
finefocus-533	233	17	the	the	DET
finefocus-533	233	18	solomon	solomon	PROPN
finefocus-533	233	19	mine	mine	PROPN
finefocus-533	233	20	adit	adit	NOUN
finefocus-533	233	21	and	and	CCONJ
finefocus-533	233	22	providing	provide	VERB
finefocus-533	233	23	historical	historical	ADJ
finefocus-533	233	24	waterquality	waterquality	NOUN
finefocus-533	233	25	data	datum	NOUN
finefocus-533	233	26	.	.	PUNCT
finefocus-533	234	1	without	without	ADP
finefocus-533	234	2	her	her	PRON
finefocus-533	234	3	assistance	assistance	NOUN
finefocus-533	234	4	,	,	PUNCT
finefocus-533	234	5	this	this	DET
finefocus-533	234	6	1	1	X
finefocus-533	234	7	.	.	PUNCT
finefocus-533	234	8	auld	auld	AUX
finefocus-533	234	9	rr	rr	PROPN
finefocus-533	234	10	,	,	PUNCT
finefocus-533	234	11	mykytczuk	mykytczuk	PROPN
finefocus-533	234	12	ncs	ncs	PROPN
finefocus-533	234	13	,	,	PUNCT
finefocus-533	234	14	leduc	leduc	PROPN
finefocus-533	234	15	lg	lg	PROPN
finefocus-533	234	16	,	,	PUNCT
finefocus-533	234	17	merritt	merritt	PROPN
finefocus-533	234	18	tjs	tjs	PROPN
finefocus-533	234	19	.	.	PROPN
finefocus-533	234	20	2016	2016	NUM
finefocus-533	234	21	.	.	PUNCT
finefocus-533	235	1	seasonal	seasonal	ADJ
finefocus-533	235	2	variation	variation	NOUN
finefocus-533	235	3	in	in	ADP
finefocus-533	235	4	an	an	DET
finefocus-533	235	5	acid	acid	NOUN
finefocus-533	235	6	mine	mine	NOUN
finefocus-533	235	7	drainage	drainage	NOUN
finefocus-533	235	8	microbial	microbial	ADJ
finefocus-533	235	9	community	community	NOUN
finefocus-533	235	10	.	.	PUNCT
finefocus-533	236	1	can	can	AUX
finefocus-533	236	2	.	.	PUNCT
finefocus-533	237	1	j.	j.	PROPN
finefocus-533	237	2	microbiol	microbiol	PROPN
finefocus-533	237	3	.	.	PUNCT
finefocus-533	238	1	63:137–52	63:137–52	ADJ
finefocus-533	238	2	.	.	PUNCT
finefocus-533	239	1	2	2	X
finefocus-533	239	2	.	.	X
finefocus-533	239	3	bachy	bachy	PROPN
finefocus-533	239	4	c	c	PROPN
finefocus-533	239	5	,	,	PUNCT
finefocus-533	239	6	worden	worden	PROPN
finefocus-533	239	7	az	az	PROPN
finefocus-533	239	8	.	.	PUNCT
finefocus-533	239	9	2014	2014	NUM
finefocus-533	239	10	.	.	PUNCT
finefocus-533	240	1	microbial	microbial	ADJ
finefocus-533	240	2	ecology	ecology	NOUN
finefocus-533	240	3	:	:	PUNCT
finefocus-533	240	4	finding	find	VERB
finefocus-533	240	5	structure	structure	NOUN
finefocus-533	240	6	in	in	ADP
finefocus-533	240	7	the	the	DET
finefocus-533	240	8	rare	rare	ADJ
finefocus-533	240	9	biosphere	biosphere	NOUN
finefocus-533	240	10	.	.	PUNCT
finefocus-533	241	1	curr	curr	PROPN
finefocus-533	241	2	.	.	PUNCT
finefocus-533	242	1	biol	biol	PROPN
finefocus-533	242	2	.	.	PUNCT
finefocus-533	243	1	24	24	NUM
finefocus-533	243	2	:	:	PUNCT
finefocus-533	243	3	r315	r315	PROPN
finefocus-533	243	4	–	–	PUNCT
finefocus-533	243	5	r317	r317	PROPN
finefocus-533	243	6	.	.	PROPN
finefocus-533	244	1	3	3	X
finefocus-533	244	2	.	.	X
finefocus-533	244	3	baker	baker	PROPN
finefocus-533	244	4	bj	bj	PROPN
finefocus-533	244	5	,	,	PUNCT
finefocus-533	244	6	banfield	banfield	PROPN
finefocus-533	244	7	jf	jf	PROPN
finefocus-533	244	8	.	.	PROPN
finefocus-533	244	9	2003	2003	NUM
finefocus-533	244	10	.	.	PUNCT
finefocus-533	245	1	microbial	microbial	ADJ
finefocus-533	245	2	communities	community	NOUN
finefocus-533	245	3	in	in	ADP
finefocus-533	245	4	acid	acid	NOUN
finefocus-533	245	5	mine	mine	NOUN
finefocus-533	245	6	drainage	drainage	NOUN
finefocus-533	245	7	.	.	PUNCT
finefocus-533	246	1	fems	fems	PROPN
finefocus-533	246	2	microbiol	microbiol	PROPN
finefocus-533	246	3	.	.	PUNCT
finefocus-533	247	1	ecol	ecol	PROPN
finefocus-533	247	2	.	.	PUNCT
finefocus-533	248	1	44:139–152	44:139–152	NUM
finefocus-533	248	2	.	.	PUNCT
finefocus-533	249	1	4.bokulich	4.bokulich	PRON
finefocus-533	249	2	na	na	NOUN
finefocus-533	249	3	,	,	PUNCT
finefocus-533	249	4	subramanian	subramanian	PROPN
finefocus-533	249	5	s	s	PROPN
finefocus-533	249	6	,	,	PUNCT
finefocus-533	249	7	faith	faith	NOUN
finefocus-533	249	8	jj	jj	PROPN
finefocus-533	249	9	,	,	PUNCT
finefocus-533	249	10	gevers	gevers	PROPN
finefocus-533	249	11	d	d	PROPN
finefocus-533	249	12	,	,	PUNCT
finefocus-533	249	13	gordon	gordon	PROPN
finefocus-533	249	14	ji	ji	PROPN
finefocus-533	249	15	,	,	PUNCT
finefocus-533	249	16	knight	knight	PROPN
finefocus-533	249	17	r	r	NOUN
finefocus-533	249	18	,	,	PUNCT
finefocus-533	249	19	mills	mill	NOUN
finefocus-533	249	20	da	da	PROPN
finefocus-533	249	21	,	,	PUNCT
finefocus-533	249	22	caporaso	caporaso	NOUN
finefocus-533	249	23	jg	jg	PROPN
finefocus-533	249	24	.	.	PROPN
finefocus-533	250	1	2013	2013	NUM
finefocus-533	250	2	.	.	PUNCT
finefocus-533	251	1	quality	quality	NOUN
finefocus-533	251	2	-	-	PUNCT
finefocus-533	251	3	filtering	filtering	NOUN
finefocus-533	251	4	vastly	vastly	ADV
finefocus-533	251	5	improves	improve	VERB
finefocus-533	251	6	diversity	diversity	NOUN
finefocus-533	251	7	estimates	estimate	NOUN
finefocus-533	251	8	from	from	ADP
finefocus-533	251	9	illumina	illumina	PROPN
finefocus-533	251	10	communities	community	NOUN
finefocus-533	251	11	will	will	AUX
finefocus-533	251	12	likely	likely	ADV
finefocus-533	251	13	be	be	AUX
finefocus-533	251	14	sufficient	sufficient	ADJ
finefocus-533	251	15	to	to	PART
finefocus-533	251	16	successfully	successfully	ADV
finefocus-533	251	17	seed	seed	VERB
finefocus-533	251	18	a	a	DET
finefocus-533	251	19	functional	functional	ADJ
finefocus-533	251	20	renovation	renovation	NOUN
finefocus-533	251	21	of	of	ADP
finefocus-533	251	22	the	the	DET
finefocus-533	251	23	constructed	construct	VERB
finefocus-533	251	24	wetland	wetland	NOUN
finefocus-533	251	25	system	system	NOUN
finefocus-533	251	26	.	.	PUNCT
finefocus-533	252	1	project	project	NOUN
finefocus-533	252	2	may	may	AUX
finefocus-533	252	3	not	not	PART
finefocus-533	252	4	have	have	AUX
finefocus-533	252	5	been	be	AUX
finefocus-533	252	6	feasible	feasible	ADJ
finefocus-533	252	7	.	.	PUNCT
finefocus-533	253	1	we	we	PRON
finefocus-533	253	2	also	also	ADV
finefocus-533	253	3	thank	thank	VERB
finefocus-533	253	4	regina	regina	PROPN
finefocus-533	253	5	lamendella	lamendella	PROPN
finefocus-533	253	6	and	and	CCONJ
finefocus-533	253	7	wright	wright	PROPN
finefocus-533	253	8	laboratories	laboratory	NOUN
finefocus-533	253	9	housed	house	VERB
finefocus-533	253	10	at	at	ADP
finefocus-533	253	11	juniata	juniata	PROPN
finefocus-533	253	12	college	college	PROPN
finefocus-533	253	13	in	in	ADP
finefocus-533	253	14	huntingdon	huntingdon	PROPN
finefocus-533	253	15	,	,	PUNCT
finefocus-533	253	16	pa	pa	PROPN
finefocus-533	253	17	for	for	ADP
finefocus-533	253	18	donating	donate	VERB
finefocus-533	253	19	the	the	DET
finefocus-533	253	20	illumina	illumina	PROPN
finefocus-533	253	21	itag	itag	NOUN
finefocus-533	253	22	primers	primer	NOUN
finefocus-533	253	23	,	,	PUNCT
finefocus-533	253	24	providing	provide	VERB
finefocus-533	253	25	access	access	NOUN
finefocus-533	253	26	to	to	ADP
finefocus-533	253	27	the	the	DET
finefocus-533	253	28	remote	remote	ADJ
finefocus-533	253	29	hhmi	hhmi	ADJ
finefocus-533	253	30	computing	computing	NOUN
finefocus-533	253	31	cluster	cluster	NOUN
finefocus-533	253	32	server	server	NOUN
finefocus-533	253	33	,	,	PUNCT
finefocus-533	253	34	and	and	CCONJ
finefocus-533	253	35	insight	insight	NOUN
finefocus-533	253	36	regarding	regard	VERB
finefocus-533	253	37	the	the	DET
finefocus-533	253	38	preprocessing	preprocessing	NOUN
finefocus-533	253	39	of	of	ADP
finefocus-533	253	40	raw	raw	ADJ
finefocus-533	253	41	sequence	sequence	NOUN
finefocus-533	253	42	reads	read	VERB
finefocus-533	253	43	.	.	PUNCT
finefocus-533	254	1	amplicon	amplicon	NOUN
finefocus-533	254	2	sequencing	sequence	VERB
finefocus-533	254	3	.	.	PUNCT
finefocus-533	255	1	nat	nat	PROPN
finefocus-533	255	2	.	.	PUNCT
finefocus-533	256	1	methods	method	NOUN
finefocus-533	256	2	.	.	PUNCT
finefocus-533	257	1	10:57	10:57	NUM
finefocus-533	257	2	–	–	PUNCT
finefocus-533	257	3	59	59	NUM
finefocus-533	257	4	.	.	NOUN
finefocus-533	257	5	5	5	NUM
finefocus-533	257	6	.	.	X
finefocus-533	257	7	bond	bond	PROPN
finefocus-533	257	8	pl	pl	PROPN
finefocus-533	257	9	,	,	PUNCT
finefocus-533	257	10	druschel	druschel	PROPN
finefocus-533	257	11	gk	gk	PROPN
finefocus-533	257	12	,	,	PUNCT
finefocus-533	257	13	banfield	banfield	PROPN
finefocus-533	257	14	jf	jf	PROPN
finefocus-533	257	15	.	.	PROPN
finefocus-533	257	16	2000	2000	NUM
finefocus-533	257	17	.	.	PUNCT
finefocus-533	258	1	comparison	comparison	NOUN
finefocus-533	258	2	of	of	ADP
finefocus-533	258	3	acid	acid	NOUN
finefocus-533	258	4	mine	mine	ADJ
finefocus-533	258	5	drainage	drainage	NOUN
finefocus-533	258	6	microbial	microbial	ADJ
finefocus-533	258	7	communities	community	NOUN
finefocus-533	258	8	in	in	ADP
finefocus-533	258	9	physically	physically	ADV
finefocus-533	258	10	and	and	CCONJ
finefocus-533	258	11	geochemically	geochemically	ADV
finefocus-533	258	12	distinct	distinct	ADJ
finefocus-533	258	13	ecosystems	ecosystem	NOUN
finefocus-533	258	14	.	.	PUNCT
finefocus-533	259	1	appl	appl	PROPN
finefocus-533	259	2	.	.	PUNCT
finefocus-533	260	1	environ	environ	PROPN
finefocus-533	260	2	.	.	PUNCT
finefocus-533	260	3	microbiol	microbiol	PROPN
finefocus-533	260	4	.	.	PUNCT
finefocus-533	261	1	66:4962–4971	66:4962–4971	NUM
finefocus-533	261	2	.	.	NOUN
finefocus-533	261	3	6	6	NUM
finefocus-533	261	4	.	.	X
finefocus-533	261	5	brune	brune	PROPN
finefocus-533	261	6	kd	kd	PROPN
finefocus-533	261	7	,	,	PUNCT
finefocus-533	261	8	bayer	bayer	PROPN
finefocus-533	261	9	ts	ts	PROPN
finefocus-533	261	10	.	.	PROPN
finefocus-533	261	11	2012	2012	NUM
finefocus-533	261	12	.	.	PUNCT
finefocus-533	262	1	engineering	engineer	VERB
finefocus-533	262	2	microbial	microbial	ADJ
finefocus-533	262	3	consortia	consortium	NOUN
finefocus-533	262	4	to	to	PART
finefocus-533	262	5	enhance	enhance	VERB
finefocus-533	262	6	biomining	biomine	VERB
finefocus-533	262	7	and	and	CCONJ
finefocus-533	262	8	bioremediation	bioremediation	NOUN
finefocus-533	262	9	.	.	PUNCT
finefocus-533	263	1	front	front	NOUN
finefocus-533	263	2	.	.	PUNCT
finefocus-533	264	1	microbiol	microbiol	PROPN
finefocus-533	264	2	.	.	PUNCT
finefocus-533	265	1	3:203	3:203	NUM
finefocus-533	265	2	.	.	X
finefocus-533	265	3	7	7	X
finefocus-533	265	4	.	.	X
finefocus-533	265	5	caporaso	caporaso	PROPN
finefocus-533	265	6	jg	jg	PROPN
finefocus-533	265	7	,	,	PUNCT
finefocus-533	265	8	kuczynski	kuczynski	PROPN
finefocus-533	265	9	j	j	PROPN
finefocus-533	265	10	,	,	PUNCT
finefocus-533	265	11	stombaugh	stombaugh	PROPN
finefocus-533	265	12	j	j	PROPN
finefocus-533	265	13	,	,	PUNCT
finefocus-533	265	14	bittinger	bittinger	PROPN
finefocus-533	265	15	k	k	PROPN
finefocus-533	265	16	,	,	PUNCT
finefocus-533	265	17	bushman	bushman	PROPN
finefocus-533	265	18	fd	fd	PROPN
finefocus-533	265	19	,	,	PUNCT
finefocus-533	265	20	costello	costello	PROPN
finefocus-533	265	21	ek	ek	PROPN
finefocus-533	265	22	,	,	PUNCT
finefocus-533	265	23	fierer	fierer	NOUN
finefocus-533	265	24	n	n	CCONJ
finefocus-533	265	25	,	,	PUNCT
finefocus-533	265	26	peña	peña	PROPN
finefocus-533	265	27	ag	ag	PROPN
finefocus-533	265	28	,	,	PUNCT
finefocus-533	265	29	goodrich	goodrich	PROPN
finefocus-533	265	30	jk	jk	PROPN
finefocus-533	265	31	,	,	PUNCT
finefocus-533	265	32	gordon	gordon	PROPN
finefocus-533	265	33	ji	ji	PROPN
finefocus-533	265	34	.	.	PROPN
finefocus-533	265	35	2010	2010	NUM
finefocus-533	265	36	.	.	PUNCT
finefocus-533	266	1	qiime	qiime	PROPN
finefocus-533	266	2	allows	allow	VERB
finefocus-533	266	3	analysis	analysis	NOUN
finefocus-533	266	4	of	of	ADP
finefocus-533	266	5	high	high	ADJ
finefocus-533	266	6	-	-	PUNCT
finefocus-533	266	7	throughput	throughput	NOUN
finefocus-533	266	8	acknowledgements	acknowledgement	NOUN
finefocus-533	266	9	references	reference	NOUN
finefocus-533	266	10	63applied	63applied	ADJ
finefocus-533	266	11	&	&	CCONJ
finefocus-533	266	12	environmental	environmental	ADJ
finefocus-533	266	13	microbiology	microbiology	NOUN
finefocus-533	266	14	•	•	NOUN
finefocus-533	266	15	community	community	NOUN
finefocus-533	266	16	sequencing	sequence	VERB
finefocus-533	266	17	data	datum	NOUN
finefocus-533	266	18	.	.	PUNCT
finefocus-533	267	1	nat	nat	PROPN
finefocus-533	267	2	.	.	PUNCT
finefocus-533	268	1	methods	method	NOUN
finefocus-533	268	2	.	.	PUNCT
finefocus-533	269	1	7:335–336	7:335–336	NOUN
finefocus-533	269	2	.	.	PUNCT
finefocus-533	270	1	8	8	NUM
finefocus-533	270	2	.	.	X
finefocus-533	270	3	caporaso	caporaso	PROPN
finefocus-533	270	4	jg	jg	PROPN
finefocus-533	270	5	,	,	PUNCT
finefocus-533	270	6	lauber	lauber	PROPN
finefocus-533	270	7	cl	cl	PROPN
finefocus-533	270	8	,	,	PUNCT
finefocus-533	270	9	walters	walters	PROPN
finefocus-533	270	10	wa	wa	PROPN
finefocus-533	270	11	,	,	PUNCT
finefocus-533	270	12	berg	berg	PROPN
finefocus-533	270	13	-	-	PUNCT
finefocus-533	270	14	lyons	lyons	PROPN
finefocus-533	270	15	d	d	PROPN
finefocus-533	270	16	,	,	PUNCT
finefocus-533	270	17	lozupone	lozupone	NOUN
finefocus-533	270	18	ca	ca	NOUN
finefocus-533	270	19	,	,	PUNCT
finefocus-533	270	20	turnbaugh	turnbaugh	PROPN
finefocus-533	270	21	pj	pj	PROPN
finefocus-533	270	22	,	,	PUNCT
finefocus-533	270	23	fierer	fierer	NOUN
finefocus-533	270	24	n	n	CCONJ
finefocus-533	270	25	,	,	PUNCT
finefocus-533	270	26	knight	knight	PROPN
finefocus-533	270	27	r.	r.	PROPN
finefocus-533	270	28	2011	2011	NUM
finefocus-533	270	29	.	.	PUNCT
finefocus-533	271	1	global	global	ADJ
finefocus-533	271	2	patterns	pattern	NOUN
finefocus-533	271	3	of	of	ADP
finefocus-533	271	4	16s	16s	PROPN
finefocus-533	271	5	rrna	rrna	PROPN
finefocus-533	271	6	diversity	diversity	NOUN
finefocus-533	271	7	at	at	ADP
finefocus-533	271	8	a	a	DET
finefocus-533	271	9	depth	depth	NOUN
finefocus-533	271	10	of	of	ADP
finefocus-533	271	11	millions	million	NOUN
finefocus-533	271	12	of	of	ADP
finefocus-533	271	13	sequences	sequence	NOUN
finefocus-533	271	14	per	per	ADP
finefocus-533	271	15	sample	sample	NOUN
finefocus-533	271	16	.	.	PUNCT
finefocus-533	272	1	proc	proc	PROPN
finefocus-533	272	2	.	.	PUNCT
finefocus-533	273	1	natl	natl	PROPN
finefocus-533	273	2	.	.	PUNCT
finefocus-533	274	1	acad	acad	PROPN
finefocus-533	274	2	.	.	PUNCT
finefocus-533	275	1	sci	sci	PROPN
finefocus-533	275	2	.	.	PUNCT
finefocus-533	276	1	108:4516–4522	108:4516–4522	NUM
finefocus-533	276	2	.	.	NOUN
finefocus-533	277	1	9	9	NUM
finefocus-533	277	2	.	.	PUNCT
finefocus-533	277	3	chao	chao	PROPN
finefocus-533	277	4	a.	a.	PROPN
finefocus-533	277	5	1984	1984	NUM
finefocus-533	277	6	.	.	PUNCT
finefocus-533	278	1	nonparametric	nonparametric	NOUN
finefocus-533	278	2	estimation	estimation	NOUN
finefocus-533	278	3	of	of	ADP
finefocus-533	278	4	the	the	DET
finefocus-533	278	5	number	number	NOUN
finefocus-533	278	6	of	of	ADP
finefocus-533	278	7	classes	class	NOUN
finefocus-533	278	8	in	in	ADP
finefocus-533	278	9	a	a	DET
finefocus-533	278	10	population	population	NOUN
finefocus-533	278	11	.	.	PUNCT
finefocus-533	279	1	scand	scand	PROPN
finefocus-533	279	2	.	.	PUNCT
finefocus-533	280	1	j.	j.	PROPN
finefocus-533	280	2	stat	stat	PROPN
finefocus-533	280	3	.	.	PUNCT
finefocus-533	280	4	,	,	PUNCT
finefocus-533	281	1	pp	pp	ADJ
finefocus-533	281	2	.	.	PUNCT
finefocus-533	282	1	265–270	265–270	NUM
finefocus-533	282	2	10	10	NUM
finefocus-533	282	3	.	.	PUNCT
finefocus-533	283	1	dedysh	dedysh	PROPN
finefocus-533	283	2	sn	sn	PROPN
finefocus-533	283	3	,	,	PUNCT
finefocus-533	283	4	kulichevskaya	kulichevskaya	PROPN
finefocus-533	283	5	is	be	AUX
finefocus-533	283	6	.	.	PUNCT
finefocus-533	284	1	2013	2013	NUM
finefocus-533	284	2	.	.	PUNCT
finefocus-533	285	1	acidophilic	acidophilic	ADJ
finefocus-533	285	2	planctomycetes	planctomycete	NOUN
finefocus-533	285	3	:	:	PUNCT
finefocus-533	285	4	expanding	expand	VERB
finefocus-533	285	5	the	the	DET
finefocus-533	285	6	horizons	horizon	NOUN
finefocus-533	285	7	of	of	ADP
finefocus-533	285	8	new	new	ADJ
finefocus-533	285	9	planctomycete	planctomycete	ADJ
finefocus-533	285	10	diversity	diversity	NOUN
finefocus-533	285	11	.	.	PUNCT
finefocus-533	286	1	in	in	ADP
finefocus-533	286	2	planctomycetes	planctomycete	NOUN
finefocus-533	286	3	:	:	PUNCT
finefocus-533	286	4	cell	cell	NOUN
finefocus-533	286	5	structure	structure	NOUN
finefocus-533	286	6	,	,	PUNCT
finefocus-533	286	7	origins	origin	NOUN
finefocus-533	286	8	and	and	CCONJ
finefocus-533	286	9	biology	biology	NOUN
finefocus-533	286	10	,	,	PUNCT
finefocus-533	286	11	pp	pp	ADJ
finefocus-533	286	12	.	.	PUNCT
finefocus-533	287	1	125–139	125–139	NUM
finefocus-533	287	2	.	.	PUNCT
finefocus-533	287	3	springer	springer	NOUN
finefocus-533	287	4	11	11	NUM
finefocus-533	287	5	.	.	PUNCT
finefocus-533	288	1	desantis	desantis	PROPN
finefocus-533	288	2	tz	tz	PROPN
finefocus-533	288	3	,	,	PUNCT
finefocus-533	288	4	hugenholtz	hugenholtz	NOUN
finefocus-533	288	5	p	p	NOUN
finefocus-533	288	6	,	,	PUNCT
finefocus-533	288	7	larsen	larsen	PROPN
finefocus-533	288	8	n	n	PROPN
finefocus-533	288	9	,	,	PUNCT
finefocus-533	288	10	rojas	rojas	PROPN
finefocus-533	288	11	m	m	PROPN
finefocus-533	288	12	,	,	PUNCT
finefocus-533	288	13	brodie	brodie	PROPN
finefocus-533	288	14	el	el	PROPN
finefocus-533	288	15	,	,	PUNCT
finefocus-533	288	16	keller	keller	PROPN
finefocus-533	288	17	k	k	PROPN
finefocus-533	288	18	,	,	PUNCT
finefocus-533	288	19	huber	huber	PROPN
finefocus-533	288	20	t	t	PROPN
finefocus-533	288	21	,	,	PUNCT
finefocus-533	288	22	dalevi	dalevi	PROPN
finefocus-533	288	23	d	d	PROPN
finefocus-533	288	24	,	,	PUNCT
finefocus-533	288	25	hu	hu	PROPN
finefocus-533	289	1	p	p	PROPN
finefocus-533	289	2	,	,	PUNCT
finefocus-533	289	3	andersen	andersen	PROPN
finefocus-533	289	4	gl	gl	PROPN
finefocus-533	289	5	.	.	PROPN
finefocus-533	289	6	2006	2006	NUM
finefocus-533	289	7	.	.	PUNCT
finefocus-533	290	1	greengenes	greengene	NOUN
finefocus-533	290	2	,	,	PUNCT
finefocus-533	290	3	a	a	DET
finefocus-533	290	4	chimera	chimera	NOUN
finefocus-533	290	5	-	-	PUNCT
finefocus-533	290	6	checked	check	VERB
finefocus-533	290	7	16s	16s	PROPN
finefocus-533	290	8	rrna	rrna	PROPN
finefocus-533	290	9	gene	gene	NOUN
finefocus-533	290	10	database	database	NOUN
finefocus-533	290	11	and	and	CCONJ
finefocus-533	290	12	workbench	workbench	VERB
finefocus-533	290	13	compatible	compatible	ADJ
finefocus-533	290	14	with	with	ADP
finefocus-533	290	15	arb	arb	PROPN
finefocus-533	290	16	.	.	PROPN
finefocus-533	290	17	appl	appl	PROPN
finefocus-533	290	18	.	.	PUNCT
finefocus-533	291	1	environ	environ	PROPN
finefocus-533	291	2	.	.	PUNCT
finefocus-533	291	3	microbiol	microbiol	PROPN
finefocus-533	291	4	.	.	PUNCT
finefocus-533	292	1	72:5069–5072	72:5069–5072	X
finefocus-533	292	2	.	.	NOUN
finefocus-533	292	3	12	12	NUM
finefocus-533	292	4	.	.	PUNCT
finefocus-533	292	5	edgar	edgar	PROPN
finefocus-533	292	6	rc	rc	PROPN
finefocus-533	292	7	.	.	PROPN
finefocus-533	292	8	2013	2013	NUM
finefocus-533	292	9	.	.	PUNCT
finefocus-533	293	1	uparse	uparse	NOUN
finefocus-533	293	2	:	:	PUNCT
finefocus-533	293	3	highly	highly	ADV
finefocus-533	293	4	accurate	accurate	ADJ
finefocus-533	293	5	otu	otu	PROPN
finefocus-533	293	6	sequences	sequence	NOUN
finefocus-533	293	7	from	from	ADP
finefocus-533	293	8	microbial	microbial	ADJ
finefocus-533	293	9	amplicon	amplicon	NOUN
finefocus-533	293	10	reads	read	NOUN
finefocus-533	293	11	.	.	PUNCT
finefocus-533	294	1	nat	nat	PROPN
finefocus-533	294	2	.	.	PUNCT
finefocus-533	295	1	methods	method	NOUN
finefocus-533	295	2	.	.	PUNCT
finefocus-533	296	1	10:996–998	10:996–998	NUM
finefocus-533	296	2	.	.	PUNCT
finefocus-533	297	1	13	13	NUM
finefocus-533	297	2	.	.	X
finefocus-533	297	3	egiebor	egiebor	PROPN
finefocus-533	297	4	no	no	PROPN
finefocus-533	297	5	,	,	PUNCT
finefocus-533	297	6	oni	oni	PROPN
finefocus-533	297	7	b.	b.	PROPN
finefocus-533	297	8	2007	2007	NUM
finefocus-533	297	9	.	.	PUNCT
finefocus-533	298	1	acid	acid	NOUN
finefocus-533	298	2	rock	rock	NOUN
finefocus-533	298	3	drainage	drainage	NOUN
finefocus-533	298	4	formation	formation	NOUN
finefocus-533	298	5	and	and	CCONJ
finefocus-533	298	6	treatment	treatment	NOUN
finefocus-533	298	7	:	:	PUNCT
finefocus-533	298	8	a	a	DET
finefocus-533	298	9	review	review	NOUN
finefocus-533	298	10	.	.	PUNCT
finefocus-533	299	1	asia	asia	PROPN
finefocus-533	299	2	-	-	PUNCT
finefocus-533	299	3	pac	pac	PROPN
finefocus-533	299	4	.	.	PUNCT
finefocus-533	299	5	j.	j.	PROPN
finefocus-533	299	6	chem	chem	PROPN
finefocus-533	299	7	.	.	PUNCT
finefocus-533	300	1	eng	eng	PROPN
finefocus-533	300	2	.	.	PUNCT
finefocus-533	301	1	2:47–62	2:47–62	NUM
finefocus-533	301	2	.	.	PROPN
finefocus-533	302	1	14	14	NUM
finefocus-533	302	2	.	.	PUNCT
finefocus-533	303	1	eisen	eisen	PROPN
finefocus-533	303	2	ja	ja	PROPN
finefocus-533	303	3	.	.	PROPN
finefocus-533	303	4	2007	2007	NUM
finefocus-533	303	5	.	.	PUNCT
finefocus-533	304	1	environmental	environmental	ADJ
finefocus-533	304	2	shotgun	shotgun	NOUN
finefocus-533	304	3	sequencing	sequence	VERB
finefocus-533	304	4	:	:	PUNCT
finefocus-533	304	5	its	its	PRON
finefocus-533	304	6	potential	potential	NOUN
finefocus-533	304	7	and	and	CCONJ
finefocus-533	304	8	challenges	challenge	NOUN
finefocus-533	304	9	for	for	ADP
finefocus-533	304	10	studying	study	VERB
finefocus-533	304	11	the	the	DET
finefocus-533	304	12	hidden	hidden	ADJ
finefocus-533	304	13	world	world	NOUN
finefocus-533	304	14	of	of	ADP
finefocus-533	304	15	microbes	microbe	NOUN
finefocus-533	304	16	.	.	PUNCT
finefocus-533	305	1	plos	plos	PROPN
finefocus-533	305	2	biol	biol	PROPN
finefocus-533	305	3	.	.	PUNCT
finefocus-533	306	1	5	5	NUM
finefocus-533	306	2	:	:	SYM
finefocus-533	306	3	e82	e82	PROPN
finefocus-533	306	4	.	.	PROPN
finefocus-533	307	1	15	15	NUM
finefocus-533	307	2	.	.	PUNCT
finefocus-533	308	1	emmons	emmons	PROPN
finefocus-533	308	2	wh	wh	PROPN
finefocus-533	308	3	,	,	PUNCT
finefocus-533	308	4	larsen	larsen	PROPN
finefocus-533	308	5	es	es	PROPN
finefocus-533	308	6	.	.	PROPN
finefocus-533	308	7	1923	1923	NUM
finefocus-533	308	8	.	.	PUNCT
finefocus-533	309	1	geology	geology	NOUN
finefocus-533	309	2	and	and	CCONJ
finefocus-533	309	3	ore	ore	NOUN
finefocus-533	309	4	deposits	deposit	NOUN
finefocus-533	309	5	of	of	ADP
finefocus-533	309	6	the	the	DET
finefocus-533	309	7	creede	creede	PROPN
finefocus-533	309	8	district	district	PROPN
finefocus-533	309	9	,	,	PUNCT
finefocus-533	309	10	colorado	colorado	PROPN
finefocus-533	309	11	.	.	PUNCT
finefocus-533	310	1	us	we	PRON
finefocus-533	310	2	government	government	NOUN
finefocus-533	310	3	printing	printing	NOUN
finefocus-533	310	4	office	office	NOUN
finefocus-533	310	5	16	16	NUM
finefocus-533	310	6	.	.	PUNCT
finefocus-533	311	1	epstein	epstein	PROPN
finefocus-533	311	2	ss	ss	PROPN
finefocus-533	311	3	.	.	PROPN
finefocus-533	311	4	2013	2013	NUM
finefocus-533	311	5	.	.	PUNCT
finefocus-533	312	1	the	the	DET
finefocus-533	312	2	phenomenon	phenomenon	NOUN
finefocus-533	312	3	of	of	ADP
finefocus-533	312	4	microbial	microbial	ADJ
finefocus-533	312	5	uncultivability	uncultivability	NOUN
finefocus-533	312	6	.	.	PUNCT
finefocus-533	313	1	curr	curr	PROPN
finefocus-533	313	2	.	.	PUNCT
finefocus-533	314	1	opin	opin	NOUN
finefocus-533	314	2	.	.	PUNCT
finefocus-533	315	1	microbiol	microbiol	PROPN
finefocus-533	315	2	.	.	PUNCT
finefocus-533	316	1	16:636–642	16:636–642	NUM
finefocus-533	316	2	.	.	PUNCT
finefocus-533	317	1	17	17	NUM
finefocus-533	317	2	.	.	PUNCT
finefocus-533	317	3	fadrosh	fadrosh	PROPN
finefocus-533	317	4	dw	dw	PROPN
finefocus-533	317	5	,	,	PUNCT
finefocus-533	317	6	ma	ma	PROPN
finefocus-533	317	7	b	b	PROPN
finefocus-533	317	8	,	,	PUNCT
finefocus-533	317	9	gajer	gajer	VERB
finefocus-533	317	10	p	p	NOUN
finefocus-533	317	11	,	,	PUNCT
finefocus-533	317	12	sengamalay	sengamalay	NOUN
finefocus-533	317	13	n	n	CCONJ
finefocus-533	317	14	,	,	PUNCT
finefocus-533	317	15	ott	ott	PROPN
finefocus-533	317	16	s	s	PROPN
finefocus-533	317	17	,	,	PUNCT
finefocus-533	317	18	brotman	brotman	PROPN
finefocus-533	317	19	rm	rm	PROPN
finefocus-533	317	20	,	,	PUNCT
finefocus-533	317	21	ravel	ravel	PROPN
finefocus-533	317	22	j.	j.	PROPN
finefocus-533	317	23	2014	2014	NUM
finefocus-533	317	24	.	.	PUNCT
finefocus-533	318	1	an	an	DET
finefocus-533	318	2	improved	improved	ADJ
finefocus-533	318	3	dual	dual	ADV
finefocus-533	318	4	-	-	PUNCT
finefocus-533	318	5	indexing	indexing	NOUN
finefocus-533	318	6	approach	approach	NOUN
finefocus-533	318	7	for	for	ADP
finefocus-533	318	8	multiplexed	multiplexed	ADJ
finefocus-533	318	9	16s	16s	PROPN
finefocus-533	318	10	rrna	rrna	PROPN
finefocus-533	318	11	gene	gene	NOUN
finefocus-533	318	12	sequencing	sequence	VERB
finefocus-533	318	13	on	on	ADP
finefocus-533	318	14	the	the	DET
finefocus-533	318	15	illumina	illumina	PROPN
finefocus-533	318	16	miseq	miseq	PROPN
finefocus-533	318	17	platform	platform	NOUN
finefocus-533	318	18	.	.	PUNCT
finefocus-533	319	1	microbiome	microbiome	NOUN
finefocus-533	319	2	.	.	PUNCT
finefocus-533	320	1	2:6	2:6	NUM
finefocus-533	320	2	.	.	PUNCT
finefocus-533	321	1	18	18	NUM
finefocus-533	321	2	.	.	PUNCT
finefocus-533	321	3	fenchel	fenchel	PROPN
finefocus-533	321	4	t	t	PROPN
finefocus-533	321	5	,	,	PUNCT
finefocus-533	321	6	blackburn	blackburn	PROPN
finefocus-533	321	7	th	th	PROPN
finefocus-533	321	8	,	,	PUNCT
finefocus-533	321	9	king	king	PROPN
finefocus-533	321	10	gm	gm	PROPN
finefocus-533	321	11	.	.	PROPN
finefocus-533	321	12	2012	2012	NUM
finefocus-533	321	13	.	.	PUNCT
finefocus-533	322	1	bacterial	bacterial	ADJ
finefocus-533	322	2	biogeochemistry	biogeochemistry	PROPN
finefocus-533	322	3	:	:	PUNCT
finefocus-533	322	4	the	the	DET
finefocus-533	322	5	ecophysiology	ecophysiology	NOUN
finefocus-533	322	6	of	of	ADP
finefocus-533	322	7	mineral	mineral	NOUN
finefocus-533	322	8	cycling	cycling	NOUN
finefocus-533	322	9	.	.	PUNCT
finefocus-533	323	1	academic	academic	ADJ
finefocus-533	323	2	press	press	PROPN
finefocus-533	323	3	19	19	NUM
finefocus-533	323	4	.	.	PUNCT
finefocus-533	324	1	gohl	gohl	PROPN
finefocus-533	324	2	dm	dm	PROPN
finefocus-533	324	3	,	,	PUNCT
finefocus-533	324	4	vangay	vangay	NOUN
finefocus-533	324	5	p	p	NOUN
finefocus-533	324	6	,	,	PUNCT
finefocus-533	324	7	garbe	garbe	PROPN
finefocus-533	324	8	j	j	PROPN
finefocus-533	324	9	,	,	PUNCT
finefocus-533	324	10	maclean	maclean	PROPN
finefocus-533	324	11	a	a	PROPN
finefocus-533	324	12	,	,	PUNCT
finefocus-533	324	13	hauge	hauge	PROPN
finefocus-533	324	14	a	a	PRON
finefocus-533	324	15	,	,	PUNCT
finefocus-533	324	16	becker	becker	PROPN
finefocus-533	324	17	a	a	X
finefocus-533	324	18	,	,	PUNCT
finefocus-533	324	19	gould	gould	PROPN
finefocus-533	324	20	tj	tj	PROPN
finefocus-533	324	21	,	,	PUNCT
finefocus-533	324	22	clayton	clayton	PROPN
finefocus-533	324	23	jb	jb	PROPN
finefocus-533	324	24	,	,	PUNCT
finefocus-533	324	25	johnson	johnson	PROPN
finefocus-533	324	26	tj	tj	PROPN
finefocus-533	324	27	,	,	PUNCT
finefocus-533	324	28	hunter	hunter	NOUN
finefocus-533	324	29	r	r	NOUN
finefocus-533	324	30	,	,	PUNCT
finefocus-533	324	31	others	other	NOUN
finefocus-533	324	32	.	.	PUNCT
finefocus-533	325	1	2016	2016	NUM
finefocus-533	325	2	.	.	PUNCT
finefocus-533	326	1	systematic	systematic	ADJ
finefocus-533	326	2	improvement	improvement	NOUN
finefocus-533	326	3	of	of	ADP
finefocus-533	326	4	amplicon	amplicon	NOUN
finefocus-533	326	5	marker	marker	NOUN
finefocus-533	326	6	gene	gene	NOUN
finefocus-533	326	7	methods	method	NOUN
finefocus-533	326	8	for	for	ADP
finefocus-533	326	9	increased	increase	VERB
finefocus-533	326	10	accuracy	accuracy	NOUN
finefocus-533	326	11	in	in	ADP
finefocus-533	326	12	microbiome	microbiome	ADJ
finefocus-533	326	13	studies	study	NOUN
finefocus-533	326	14	.	.	PUNCT
finefocus-533	327	1	nature	nature	NOUN
finefocus-533	327	2	.	.	PUNCT
finefocus-533	328	1	201:6	201:6	X
finefocus-533	328	2	.	.	X
finefocus-533	329	1	20	20	NUM
finefocus-533	329	2	.	.	PUNCT
finefocus-533	330	1	harini	harini	PROPN
finefocus-533	330	2	k	k	PROPN
finefocus-533	330	3	,	,	PUNCT
finefocus-533	330	4	ajila	ajila	NOUN
finefocus-533	330	5	v	v	NOUN
finefocus-533	330	6	,	,	PUNCT
finefocus-533	330	7	hegde	hegde	PROPN
finefocus-533	330	8	s.	s.	PROPN
finefocus-533	330	9	2013	2013	NUM
finefocus-533	330	10	.	.	PUNCT
finefocus-533	331	1	bdellovibrio	bdellovibrio	PROPN
finefocus-533	331	2	bacteriovorus	bacteriovorus	PROPN
finefocus-533	331	3	:	:	PUNCT
finefocus-533	331	4	a	a	DET
finefocus-533	331	5	future	future	ADJ
finefocus-533	331	6	antimicrobial	antimicrobial	ADJ
finefocus-533	331	7	agent	agent	NOUN
finefocus-533	331	8	?	?	PUNCT
finefocus-533	332	1	j.	j.	PROPN
finefocus-533	332	2	indian	indian	PROPN
finefocus-533	332	3	soc	soc	PROPN
finefocus-533	332	4	.	.	PUNCT
finefocus-533	333	1	periodontol	periodontol	NOUN
finefocus-533	333	2	.	.	PUNCT
finefocus-533	334	1	17:823	17:823	NUM
finefocus-533	334	2	.	.	PUNCT
finefocus-533	335	1	21	21	NUM
finefocus-533	335	2	.	.	PUNCT
finefocus-533	336	1	hell	hell	NOUN
finefocus-533	336	2	r	r	NOUN
finefocus-533	336	3	,	,	PUNCT
finefocus-533	336	4	dahl	dahl	PROPN
finefocus-533	336	5	c	c	X
finefocus-533	336	6	,	,	PUNCT
finefocus-533	336	7	knaff	knaff	PROPN
finefocus-533	336	8	db	db	PROPN
finefocus-533	336	9	,	,	PUNCT
finefocus-533	336	10	leustek	leustek	PROPN
finefocus-533	336	11	t	t	PROPN
finefocus-533	336	12	,	,	PUNCT
finefocus-533	336	13	eds	eds	PROPN
finefocus-533	336	14	.	.	PROPN
finefocus-533	336	15	2008	2008	NUM
finefocus-533	336	16	.	.	PUNCT
finefocus-533	337	1	sulfur	sulfur	NOUN
finefocus-533	337	2	metabolism	metabolism	NOUN
finefocus-533	337	3	in	in	ADP
finefocus-533	337	4	phototrophic	phototrophic	ADJ
finefocus-533	337	5	organisms	organism	NOUN
finefocus-533	337	6	.	.	PUNCT
finefocus-533	338	1	dordrecht	dordrecht	PROPN
finefocus-533	338	2	:	:	PUNCT
finefocus-533	338	3	springer	springer	NOUN
finefocus-533	338	4	22	22	NUM
finefocus-533	338	5	.	.	PUNCT
finefocus-533	339	1	huang	huang	PROPN
finefocus-533	339	2	ln	ln	PROPN
finefocus-533	339	3	,	,	PUNCT
finefocus-533	339	4	kuang	kuang	PROPN
finefocus-533	339	5	jl	jl	PROPN
finefocus-533	339	6	,	,	PUNCT
finefocus-533	339	7	shu	shu	PROPN
finefocus-533	339	8	ws	ws	PROPN
finefocus-533	339	9	.	.	PROPN
finefocus-533	339	10	2016	2016	NUM
finefocus-533	339	11	.	.	PUNCT
finefocus-533	340	1	microbial	microbial	ADJ
finefocus-533	340	2	ecology	ecology	NOUN
finefocus-533	340	3	and	and	CCONJ
finefocus-533	340	4	evolution	evolution	NOUN
finefocus-533	340	5	in	in	ADP
finefocus-533	340	6	the	the	DET
finefocus-533	340	7	acid	acid	NOUN
finefocus-533	340	8	mine	mine	NOUN
finefocus-533	340	9	drainage	drainage	NOUN
finefocus-533	340	10	model	model	NOUN
finefocus-533	340	11	system	system	NOUN
finefocus-533	340	12	.	.	PUNCT
finefocus-533	341	1	trends	trend	NOUN
finefocus-533	341	2	microbiol	microbiol	PROPN
finefocus-533	341	3	.	.	PUNCT
finefocus-533	342	1	24:581–593	24:581–593	PROPN
finefocus-533	342	2	.	.	PUNCT
finefocus-533	343	1	23	23	NUM
finefocus-533	343	2	.	.	PUNCT
finefocus-533	344	1	huston	huston	PROPN
finefocus-533	344	2	rc	rc	PROPN
finefocus-533	344	3	.	.	PROPN
finefocus-533	344	4	2005	2005	NUM
finefocus-533	344	5	.	.	PUNCT
finefocus-533	345	1	a	a	DET
finefocus-533	345	2	silver	silver	ADJ
finefocus-533	345	3	camp	camp	NOUN
finefocus-533	345	4	64•	64•	NUM
finefocus-533	345	5	fine	fine	ADJ
finefocus-533	345	6	focus	focus	NOUN
finefocus-533	345	7	,	,	PUNCT
finefocus-533	345	8	vol	vol	NOUN
finefocus-533	345	9	.	.	PUNCT
finefocus-533	345	10	4(1	4(1	NOUN
finefocus-533	345	11	)	)	PUNCT
finefocus-533	345	12	called	call	VERB
finefocus-533	345	13	creede	creede	NOUN
finefocus-533	345	14	:	:	PUNCT
finefocus-533	345	15	a	a	DET
finefocus-533	345	16	century	century	NOUN
finefocus-533	345	17	of	of	ADP
finefocus-533	345	18	mining	mining	NOUN
finefocus-533	345	19	.	.	PUNCT
finefocus-533	346	1	western	western	ADJ
finefocus-533	346	2	reflections	reflection	NOUN
finefocus-533	346	3	publishing	publish	VERB
finefocus-533	346	4	company	company	NOUN
finefocus-533	346	5	24	24	NUM
finefocus-533	346	6	.	.	PUNCT
finefocus-533	347	1	johnson	johnson	PROPN
finefocus-533	347	2	db	db	PROPN
finefocus-533	347	3	,	,	PUNCT
finefocus-533	347	4	hallberg	hallberg	PROPN
finefocus-533	347	5	kb	kb	PROPN
finefocus-533	347	6	.	.	PROPN
finefocus-533	347	7	2005	2005	NUM
finefocus-533	347	8	.	.	PUNCT
finefocus-533	348	1	acid	acid	NOUN
finefocus-533	348	2	mine	mine	ADJ
finefocus-533	348	3	drainage	drainage	NOUN
finefocus-533	348	4	remediation	remediation	NOUN
finefocus-533	348	5	options	option	NOUN
finefocus-533	348	6	:	:	PUNCT
finefocus-533	348	7	a	a	DET
finefocus-533	348	8	review	review	NOUN
finefocus-533	348	9	.	.	PUNCT
finefocus-533	349	1	sci	sci	PROPN
finefocus-533	349	2	.	.	PUNCT
finefocus-533	349	3	total	total	PROPN
finefocus-533	349	4	environ	environ	PROPN
finefocus-533	349	5	.	.	PUNCT
finefocus-533	350	1	338:3–14	338:3–14	X
finefocus-533	350	2	.	.	PROPN
finefocus-533	350	3	25	25	NUM
finefocus-533	350	4	.	.	PUNCT
finefocus-533	351	1	joseph	joseph	PROPN
finefocus-533	351	2	sj	sj	PROPN
finefocus-533	351	3	,	,	PUNCT
finefocus-533	351	4	hugenholtz	hugenholtz	NOUN
finefocus-533	351	5	p	p	NOUN
finefocus-533	351	6	,	,	PUNCT
finefocus-533	351	7	sangwan	sangwan	PROPN
finefocus-533	351	8	p	p	X
finefocus-533	351	9	,	,	PUNCT
finefocus-533	351	10	osborne	osborne	PROPN
finefocus-533	351	11	ca	ca	PROPN
finefocus-533	351	12	,	,	PUNCT
finefocus-533	351	13	janssen	janssen	PROPN
finefocus-533	351	14	ph	ph	PROPN
finefocus-533	351	15	.	.	PROPN
finefocus-533	351	16	2003	2003	NUM
finefocus-533	351	17	.	.	PUNCT
finefocus-533	352	1	laboratory	laboratory	NOUN
finefocus-533	352	2	cultivation	cultivation	NOUN
finefocus-533	352	3	of	of	ADP
finefocus-533	352	4	widespread	widespread	ADJ
finefocus-533	352	5	and	and	CCONJ
finefocus-533	352	6	previously	previously	ADV
finefocus-533	352	7	uncultured	uncultured	ADJ
finefocus-533	352	8	soil	soil	NOUN
finefocus-533	352	9	bacteria	bacteria	NOUN
finefocus-533	352	10	.	.	PUNCT
finefocus-533	353	1	appl	appl	PROPN
finefocus-533	353	2	.	.	PUNCT
finefocus-533	354	1	environ	environ	PROPN
finefocus-533	354	2	.	.	PUNCT
finefocus-533	354	3	microbiol	microbiol	PROPN
finefocus-533	354	4	.	.	PUNCT
finefocus-533	355	1	69:7210–7215	69:7210–7215	NUM
finefocus-533	355	2	.	.	NOUN
finefocus-533	355	3	26	26	NUM
finefocus-533	355	4	.	.	PUNCT
finefocus-533	356	1	krzywinski	krzywinski	PROPN
finefocus-533	356	2	m	m	PROPN
finefocus-533	356	3	,	,	PUNCT
finefocus-533	356	4	schein	schein	PROPN
finefocus-533	356	5	j	j	PROPN
finefocus-533	356	6	,	,	PUNCT
finefocus-533	356	7	birol	birol	VERB
finefocus-533	356	8	i	i	PRON
finefocus-533	356	9	,	,	PUNCT
finefocus-533	356	10	connors	connors	PROPN
finefocus-533	356	11	j	j	PROPN
finefocus-533	356	12	,	,	PUNCT
finefocus-533	356	13	gascoyne	gascoyne	PROPN
finefocus-533	356	14	r	r	PROPN
finefocus-533	356	15	,	,	PUNCT
finefocus-533	356	16	horsman	horsman	NOUN
finefocus-533	356	17	d	d	PROPN
finefocus-533	356	18	,	,	PUNCT
finefocus-533	356	19	jones	jones	PROPN
finefocus-533	356	20	sj	sj	PROPN
finefocus-533	356	21	,	,	PUNCT
finefocus-533	356	22	marra	marra	PROPN
finefocus-533	356	23	ma	ma	PROPN
finefocus-533	356	24	.	.	PROPN
finefocus-533	356	25	2009	2009	NUM
finefocus-533	356	26	.	.	PUNCT
finefocus-533	357	1	circos	circo	NOUN
finefocus-533	357	2	:	:	PUNCT
finefocus-533	357	3	an	an	DET
finefocus-533	357	4	information	information	NOUN
finefocus-533	357	5	aesthetic	aesthetic	ADJ
finefocus-533	357	6	for	for	ADP
finefocus-533	357	7	comparative	comparative	ADJ
finefocus-533	357	8	genomics	genomic	NOUN
finefocus-533	357	9	.	.	PUNCT
finefocus-533	358	1	genome	genome	NOUN
finefocus-533	358	2	res	re	NOUN
finefocus-533	358	3	.	.	PUNCT
finefocus-533	359	1	19:1639–1645	19:1639–1645	NUM
finefocus-533	359	2	.	.	PUNCT
finefocus-533	360	1	27	27	NUM
finefocus-533	360	2	.	.	PUNCT
finefocus-533	361	1	kuang	kuang	PROPN
finefocus-533	361	2	jl	jl	PROPN
finefocus-533	361	3	,	,	PUNCT
finefocus-533	361	4	huang	huang	PROPN
finefocus-533	361	5	ln	ln	PROPN
finefocus-533	361	6	,	,	PUNCT
finefocus-533	361	7	chen	chen	PROPN
finefocus-533	361	8	lx	lx	PROPN
finefocus-533	361	9	,	,	PUNCT
finefocus-533	361	10	hua	hua	PROPN
finefocus-533	361	11	zs	zs	PROPN
finefocus-533	361	12	,	,	PUNCT
finefocus-533	361	13	li	li	PROPN
finefocus-533	361	14	s	s	PROPN
finefocus-533	361	15	-	-	PROPN
finefocus-533	361	16	j	j	PROPN
finefocus-533	361	17	,	,	PUNCT
finefocus-533	361	18	hu	hu	PROPN
finefocus-533	361	19	m	m	PROPN
finefocus-533	361	20	,	,	PUNCT
finefocus-533	361	21	li	li	PROPN
finefocus-533	361	22	jt	jt	PROPN
finefocus-533	361	23	,	,	PUNCT
finefocus-533	361	24	shu	shu	PROPN
finefocus-533	361	25	ws	ws	PROPN
finefocus-533	361	26	.	.	PROPN
finefocus-533	361	27	2013	2013	NUM
finefocus-533	361	28	.	.	PUNCT
finefocus-533	362	1	contemporary	contemporary	ADJ
finefocus-533	362	2	environmental	environmental	ADJ
finefocus-533	362	3	variation	variation	NOUN
finefocus-533	362	4	determines	determine	VERB
finefocus-533	362	5	microbial	microbial	ADJ
finefocus-533	362	6	diversity	diversity	NOUN
finefocus-533	362	7	patterns	pattern	NOUN
finefocus-533	362	8	in	in	ADP
finefocus-533	362	9	acid	acid	NOUN
finefocus-533	362	10	mine	mine	NOUN
finefocus-533	362	11	drainage	drainage	NOUN
finefocus-533	362	12	.	.	PUNCT
finefocus-533	363	1	isme	isme	PROPN
finefocus-533	363	2	j.	j.	PROPN
finefocus-533	363	3	7:1038	7:1038	PROPN
finefocus-533	363	4	.	.	PROPN
finefocus-533	364	1	28	28	NUM
finefocus-533	364	2	.	.	PUNCT
finefocus-533	365	1	kulichevskaya	kulichevskaya	PROPN
finefocus-533	365	2	is	be	AUX
finefocus-533	365	3	,	,	PUNCT
finefocus-533	365	4	ivanova	ivanova	PROPN
finefocus-533	365	5	aa	aa	PROPN
finefocus-533	365	6	,	,	PUNCT
finefocus-533	365	7	suzina	suzina	PROPN
finefocus-533	365	8	ne	ne	PROPN
finefocus-533	365	9	,	,	PUNCT
finefocus-533	365	10	rijpstra	rijpstra	PROPN
finefocus-533	365	11	wic	wic	NOUN
finefocus-533	365	12	,	,	PUNCT
finefocus-533	365	13	damsté	damsté	PROPN
finefocus-533	365	14	jss	jss	PROPN
finefocus-533	365	15	,	,	PUNCT
finefocus-533	365	16	dedysh	dedysh	NOUN
finefocus-533	365	17	sn	sn	PROPN
finefocus-533	365	18	.	.	PROPN
finefocus-533	365	19	2016	2016	NUM
finefocus-533	365	20	.	.	PUNCT
finefocus-533	366	1	paludisphaera	paludisphaera	PROPN
finefocus-533	366	2	borealis	borealis	PROPN
finefocus-533	366	3	gen	gen	AUX
finefocus-533	366	4	.	.	PROPN
finefocus-533	366	5	nov	nov	PROPN
finefocus-533	366	6	.	.	PROPN
finefocus-533	366	7	,	,	PUNCT
finefocus-533	366	8	sp	sp	PROPN
finefocus-533	366	9	.	.	PROPN
finefocus-533	366	10	nov	nov	PROPN
finefocus-533	366	11	.	.	PROPN
finefocus-533	366	12	,	,	PUNCT
finefocus-533	366	13	a	a	DET
finefocus-533	366	14	hydrolytic	hydrolytic	ADJ
finefocus-533	366	15	planctomycete	planctomycete	NOUN
finefocus-533	366	16	from	from	ADP
finefocus-533	366	17	northern	northern	ADJ
finefocus-533	366	18	wetlands	wetland	NOUN
finefocus-533	366	19	,	,	PUNCT
finefocus-533	366	20	and	and	CCONJ
finefocus-533	366	21	proposal	proposal	NOUN
finefocus-533	366	22	of	of	ADP
finefocus-533	366	23	isosphaeraceae	isosphaeraceae	PROPN
finefocus-533	366	24	fam	fam	PROPN
finefocus-533	366	25	.	.	PUNCT
finefocus-533	367	1	nov	nov	PROPN
finefocus-533	367	2	.	.	PROPN
finefocus-533	367	3	int	int	PROPN
finefocus-533	367	4	.	.	PUNCT
finefocus-533	368	1	j.	j.	PROPN
finefocus-533	368	2	syst	syst	PROPN
finefocus-533	368	3	.	.	PUNCT
finefocus-533	368	4	evol	evol	PROPN
finefocus-533	368	5	.	.	PUNCT
finefocus-533	369	1	microbiol	microbiol	PROPN
finefocus-533	369	2	.	.	PUNCT
finefocus-533	370	1	66:837–844	66:837–844	VERB
finefocus-533	370	2	.	.	PUNCT
finefocus-533	371	1	29	29	NUM
finefocus-533	371	2	.	.	PUNCT
finefocus-533	372	1	lozupone	lozupone	NOUN
finefocus-533	372	2	c	c	NOUN
finefocus-533	372	3	,	,	PUNCT
finefocus-533	372	4	knight	knight	PROPN
finefocus-533	372	5	r.	r.	PROPN
finefocus-533	372	6	2005	2005	NUM
finefocus-533	372	7	.	.	PUNCT
finefocus-533	373	1	unifrac	unifrac	ADJ
finefocus-533	373	2	:	:	PUNCT
finefocus-533	373	3	a	a	DET
finefocus-533	373	4	new	new	ADJ
finefocus-533	373	5	phylogenetic	phylogenetic	ADJ
finefocus-533	373	6	method	method	NOUN
finefocus-533	373	7	for	for	ADP
finefocus-533	373	8	comparing	compare	VERB
finefocus-533	373	9	microbial	microbial	ADJ
finefocus-533	373	10	communities	community	NOUN
finefocus-533	373	11	.	.	PUNCT
finefocus-533	374	1	appl	appl	PROPN
finefocus-533	374	2	.	.	PUNCT
finefocus-533	375	1	environ	environ	PROPN
finefocus-533	375	2	.	.	PUNCT
finefocus-533	375	3	microbiol	microbiol	PROPN
finefocus-533	375	4	.	.	PUNCT
finefocus-533	376	1	71:8228–8235	71:8228–8235	NUM
finefocus-533	376	2	.	.	NOUN
finefocus-533	376	3	30	30	NUM
finefocus-533	376	4	.	.	PUNCT
finefocus-533	377	1	manter	manter	PROPN
finefocus-533	377	2	dk	dk	PROPN
finefocus-533	377	3	,	,	PUNCT
finefocus-533	377	4	weir	weir	PROPN
finefocus-533	377	5	tl	tl	PROPN
finefocus-533	377	6	,	,	PUNCT
finefocus-533	377	7	vivanco	vivanco	PROPN
finefocus-533	377	8	jm	jm	PROPN
finefocus-533	377	9	.	.	PROPN
finefocus-533	377	10	2010	2010	NUM
finefocus-533	377	11	.	.	PUNCT
finefocus-533	378	1	negative	negative	ADJ
finefocus-533	378	2	effects	effect	NOUN
finefocus-533	378	3	of	of	ADP
finefocus-533	378	4	sample	sample	NOUN
finefocus-533	378	5	pooling	pool	VERB
finefocus-533	378	6	on	on	ADP
finefocus-533	378	7	pcrbased	pcrbased	ADJ
finefocus-533	378	8	estimates	estimate	NOUN
finefocus-533	378	9	of	of	ADP
finefocus-533	378	10	soil	soil	NOUN
finefocus-533	378	11	microbial	microbial	ADJ
finefocus-533	378	12	richness	richness	NOUN
finefocus-533	378	13	and	and	CCONJ
finefocus-533	378	14	community	community	NOUN
finefocus-533	378	15	structure	structure	NOUN
finefocus-533	378	16	.	.	PUNCT
finefocus-533	379	1	appl	appl	PROPN
finefocus-533	379	2	.	.	PUNCT
finefocus-533	380	1	environ	environ	PROPN
finefocus-533	380	2	.	.	PUNCT
finefocus-533	380	3	microbiol	microbiol	PROPN
finefocus-533	380	4	.	.	PUNCT
finefocus-533	381	1	76:2086–2090	76:2086–2090	NUM
finefocus-533	381	2	.	.	NOUN
finefocus-533	381	3	31	31	NUM
finefocus-533	381	4	.	.	PUNCT
finefocus-533	382	1	méndez	méndez	NOUN
finefocus-533	382	2	-	-	PUNCT
finefocus-533	382	3	garcía	garcía	ADJ
finefocus-533	382	4	c	c	NOUN
finefocus-533	382	5	,	,	PUNCT
finefocus-533	382	6	peláez	peláez	ADJ
finefocus-533	382	7	ai	ai	PROPN
finefocus-533	382	8	,	,	PUNCT
finefocus-533	382	9	mesa	mesa	PROPN
finefocus-533	382	10	v	v	PROPN
finefocus-533	382	11	,	,	PUNCT
finefocus-533	382	12	sánchez	sánchez	PROPN
finefocus-533	382	13	j	j	PROPN
finefocus-533	382	14	,	,	PUNCT
finefocus-533	382	15	golyshina	golyshina	PROPN
finefocus-533	382	16	ov	ov	PROPN
finefocus-533	382	17	,	,	PUNCT
finefocus-533	382	18	ferrer	ferrer	PROPN
finefocus-533	382	19	m.	m.	PROPN
finefocus-533	382	20	2015	2015	NUM
finefocus-533	382	21	.	.	PUNCT
finefocus-533	383	1	microbial	microbial	ADJ
finefocus-533	383	2	diversity	diversity	NOUN
finefocus-533	383	3	and	and	CCONJ
finefocus-533	383	4	metabolic	metabolic	NOUN
finefocus-533	383	5	networks	network	NOUN
finefocus-533	383	6	in	in	ADP
finefocus-533	383	7	acid	acid	NOUN
finefocus-533	383	8	mine	mine	ADJ
finefocus-533	383	9	drainage	drainage	NOUN
finefocus-533	383	10	habitats	habitat	NOUN
finefocus-533	383	11	.	.	PUNCT
finefocus-533	384	1	front	front	ADJ
finefocus-533	384	2	.	.	PUNCT
finefocus-533	385	1	microbiol	microbiol	PROPN
finefocus-533	385	2	.	.	PUNCT
finefocus-533	386	1	6	6	NUM
finefocus-533	386	2	:	:	SYM
finefocus-533	386	3	32	32	NUM
finefocus-533	386	4	.	.	PUNCT
finefocus-533	386	5	navas	navas	PROPN
finefocus-533	386	6	-	-	PUNCT
finefocus-533	386	7	molina	molina	PROPN
finefocus-533	386	8	ja	ja	PROPN
finefocus-533	386	9	,	,	PUNCT
finefocus-533	386	10	peralta	peralta	PROPN
finefocus-533	386	11	-	-	PUNCT
finefocus-533	386	12	sánchez	sánchez	PROPN
finefocus-533	386	13	jm	jm	PROPN
finefocus-533	386	14	,	,	PUNCT
finefocus-533	386	15	gonzález	gonzález	PROPN
finefocus-533	386	16	a	a	PRON
finefocus-533	386	17	,	,	PUNCT
finefocus-533	386	18	mcmurdie	mcmurdie	PROPN
finefocus-533	386	19	pj	pj	PROPN
finefocus-533	386	20	,	,	PUNCT
finefocus-533	386	21	vázquez	vázquez	NOUN
finefocus-533	386	22	-	-	PUNCT
finefocus-533	386	23	baeza	baeza	NOUN
finefocus-533	386	24	y	y	PROPN
finefocus-533	386	25	,	,	PUNCT
finefocus-533	386	26	xu	xu	PROPN
finefocus-533	387	1	z	z	X
finefocus-533	387	2	,	,	PUNCT
finefocus-533	387	3	ursell	ursell	ADJ
finefocus-533	387	4	lk	lk	PROPN
finefocus-533	387	5	,	,	PUNCT
finefocus-533	387	6	lauber	lauber	NOUN
finefocus-533	387	7	c	c	NOUN
finefocus-533	387	8	,	,	PUNCT
finefocus-533	387	9	zhou	zhou	PROPN
finefocus-533	387	10	h	h	PROPN
finefocus-533	387	11	,	,	PUNCT
finefocus-533	387	12	song	song	NOUN
finefocus-533	387	13	sj	sj	PROPN
finefocus-533	387	14	,	,	PUNCT
finefocus-533	387	15	others	other	NOUN
finefocus-533	387	16	.	.	PUNCT
finefocus-533	388	1	2013	2013	NUM
finefocus-533	388	2	.	.	PUNCT
finefocus-533	389	1	advancing	advance	VERB
finefocus-533	389	2	our	our	PRON
finefocus-533	389	3	understanding	understanding	NOUN
finefocus-533	389	4	of	of	ADP
finefocus-533	389	5	the	the	DET
finefocus-533	389	6	human	human	ADJ
finefocus-533	389	7	microbiome	microbiome	NOUN
finefocus-533	389	8	using	use	VERB
finefocus-533	389	9	qiime	qiime	NOUN
finefocus-533	389	10	.	.	PUNCT
finefocus-533	390	1	methods	method	NOUN
finefocus-533	390	2	enzymol	enzymol	PROPN
finefocus-533	390	3	.	.	PUNCT
finefocus-533	391	1	531:371	531:371	NOUN
finefocus-533	391	2	.	.	PUNCT
finefocus-533	392	1	33	33	NUM
finefocus-533	392	2	.	.	PUNCT
finefocus-533	393	1	oren	oren	PROPN
finefocus-533	393	2	a.	a.	PROPN
finefocus-533	393	3	2009	2009	NUM
finefocus-533	393	4	.	.	PUNCT
finefocus-533	394	1	chemolithotrophy	chemolithotrophy	NOUN
finefocus-533	394	2	.	.	PUNCT
finefocus-533	395	1	els	el	VERB
finefocus-533	395	2	34	34	NUM
finefocus-533	395	3	.	.	PUNCT
finefocus-533	396	1	paulson	paulson	PROPN
finefocus-533	396	2	jn	jn	PROPN
finefocus-533	396	3	,	,	PUNCT
finefocus-533	396	4	stine	stine	PROPN
finefocus-533	396	5	oc	oc	PROPN
finefocus-533	396	6	,	,	PUNCT
finefocus-533	396	7	bravo	bravo	PROPN
finefocus-533	396	8	hc	hc	PROPN
finefocus-533	396	9	,	,	PUNCT
finefocus-533	396	10	pop	pop	ADJ
finefocus-533	396	11	m.	m.	NOUN
finefocus-533	396	12	2013	2013	NUM
finefocus-533	396	13	.	.	PUNCT
finefocus-533	397	1	differential	differential	NOUN
finefocus-533	397	2	abundance	abundance	NOUN
finefocus-533	397	3	analysis	analysis	NOUN
finefocus-533	397	4	for	for	ADP
finefocus-533	397	5	microbial	microbial	ADJ
finefocus-533	397	6	marker	marker	NOUN
finefocus-533	397	7	-	-	PUNCT
finefocus-533	397	8	gene	gene	NOUN
finefocus-533	397	9	surveys	survey	NOUN
finefocus-533	397	10	.	.	PUNCT
finefocus-533	398	1	nat	nat	PROPN
finefocus-533	398	2	.	.	PUNCT
finefocus-533	399	1	methods	method	NOUN
finefocus-533	399	2	.	.	PUNCT
finefocus-533	400	1	10:1200–1202	10:1200–1202	NUM
finefocus-533	400	2	.	.	NOUN
finefocus-533	400	3	35	35	NUM
finefocus-533	400	4	.	.	PUNCT
finefocus-533	401	1	pedrós	pedrós	PROPN
finefocus-533	401	2	-	-	PUNCT
finefocus-533	401	3	alió	alió	PROPN
finefocus-533	401	4	c.	c.	PROPN
finefocus-533	401	5	2012	2012	NUM
finefocus-533	401	6	.	.	PUNCT
finefocus-533	402	1	the	the	DET
finefocus-533	402	2	rare	rare	ADJ
finefocus-533	402	3	bacterial	bacterial	ADJ
finefocus-533	402	4	biosphere	biosphere	NOUN
finefocus-533	402	5	.	.	PUNCT
finefocus-533	403	1	annu	annu	NOUN
finefocus-533	403	2	.	.	PUNCT
finefocus-533	404	1	rev	rev	PROPN
finefocus-533	404	2	.	.	PROPN
finefocus-533	405	1	mar	mar	PROPN
finefocus-533	405	2	.	.	PUNCT
finefocus-533	405	3	sci	sci	PROPN
finefocus-533	405	4	.	.	PUNCT
finefocus-533	406	1	4:449–466	4:449–466	NUM
finefocus-533	406	2	.	.	PROPN
finefocus-533	407	1	36	36	NUM
finefocus-533	407	2	.	.	PUNCT
finefocus-533	408	1	polz	polz	PROPN
finefocus-533	408	2	mf	mf	PROPN
finefocus-533	408	3	,	,	PUNCT
finefocus-533	408	4	cavanaugh	cavanaugh	PROPN
finefocus-533	408	5	cm	cm	PROPN
finefocus-533	408	6	.	.	PUNCT
finefocus-533	409	1	1998	1998	NUM
finefocus-533	409	2	.	.	PUNCT
finefocus-533	410	1	bias	bias	NOUN
finefocus-533	410	2	in	in	ADP
finefocus-533	410	3	template	template	NOUN
finefocus-533	410	4	-	-	PUNCT
finefocus-533	410	5	to	to	ADP
finefocus-533	410	6	-	-	PUNCT
finefocus-533	410	7	product	product	NOUN
finefocus-533	410	8	ratios	ratio	NOUN
finefocus-533	410	9	in	in	ADP
finefocus-533	410	10	multitemplate	multitemplate	ADJ
finefocus-533	410	11	pcr	pcr	PROPN
finefocus-533	410	12	.	.	PUNCT
finefocus-533	411	1	appl	appl	PROPN
finefocus-533	411	2	.	.	PUNCT
finefocus-533	412	1	environ	environ	PROPN
finefocus-533	412	2	.	.	PUNCT
finefocus-533	412	3	microbiol	microbiol	PROPN
finefocus-533	412	4	.	.	PUNCT
finefocus-533	413	1	64:3724–3730	64:3724–3730	NUM
finefocus-533	413	2	.	.	PUNCT
finefocus-533	414	1	37	37	NUM
finefocus-533	414	2	.	.	PUNCT
finefocus-533	415	1	shannon	shannon	PROPN
finefocus-533	415	2	ce	ce	PROPN
finefocus-533	415	3	,	,	PUNCT
finefocus-533	415	4	weaver	weaver	PROPN
finefocus-533	415	5	w.	w.	PROPN
finefocus-533	415	6	1998	1998	NUM
finefocus-533	415	7	.	.	PUNCT
finefocus-533	416	1	the	the	DET
finefocus-533	416	2	mathematical	mathematical	ADJ
finefocus-533	416	3	theory	theory	NOUN
finefocus-533	416	4	of	of	ADP
finefocus-533	416	5	communication	communication	NOUN
finefocus-533	416	6	.	.	PUNCT
finefocus-533	417	1	university	university	NOUN
finefocus-533	417	2	of	of	ADP
finefocus-533	417	3	illinois	illinois	PROPN
finefocus-533	417	4	press	press	PROPN
finefocus-533	417	5	38	38	NUM
finefocus-533	417	6	.	.	PUNCT
finefocus-533	418	1	shtarkman	shtarkman	PROPN
finefocus-533	418	2	ym	ym	PROPN
finefocus-533	418	3	,	,	PUNCT
finefocus-533	418	4	koçer	koçer	PROPN
finefocus-533	418	5	za	za	PROPN
finefocus-533	418	6	,	,	PUNCT
finefocus-533	418	7	edgar	edgar	PROPN
finefocus-533	418	8	r	r	NOUN
finefocus-533	418	9	,	,	PUNCT
finefocus-533	418	10	veerapaneni	veerapaneni	ADJ
finefocus-533	418	11	rs	rs	NOUN
finefocus-533	418	12	,	,	PUNCT
finefocus-533	418	13	d’elia	d’elia	PROPN
finefocus-533	418	14	t	t	PROPN
finefocus-533	418	15	,	,	PUNCT
finefocus-533	418	16	morris	morris	PROPN
finefocus-533	418	17	pf	pf	PROPN
finefocus-533	418	18	,	,	PUNCT
finefocus-533	418	19	rogers	roger	VERB
finefocus-533	418	20	so	so	ADV
finefocus-533	418	21	.	.	PUNCT
finefocus-533	419	1	2013	2013	NUM
finefocus-533	419	2	.	.	PUNCT
finefocus-533	420	1	subglacial	subglacial	PROPN
finefocus-533	420	2	lake	lake	PROPN
finefocus-533	420	3	vostok	vostok	PROPN
finefocus-533	420	4	(	(	PUNCT
finefocus-533	420	5	antarctica	antarctica	PROPN
finefocus-533	420	6	)	)	PUNCT
finefocus-533	420	7	accretion	accretion	NOUN
finefocus-533	420	8	ice	ice	NOUN
finefocus-533	420	9	contains	contain	VERB
finefocus-533	420	10	a	a	DET
finefocus-533	420	11	diverse	diverse	ADJ
finefocus-533	420	12	set	set	NOUN
finefocus-533	420	13	of	of	ADP
finefocus-533	420	14	sequences	sequence	NOUN
finefocus-533	420	15	from	from	ADP
finefocus-533	420	16	aquatic	aquatic	ADJ
finefocus-533	420	17	,	,	PUNCT
finefocus-533	420	18	marine	marine	ADJ
finefocus-533	420	19	and	and	CCONJ
finefocus-533	420	20	sediment	sediment	NOUN
finefocus-533	420	21	-	-	PUNCT
finefocus-533	420	22	inhabiting	inhabit	VERB
finefocus-533	420	23	bacteria	bacteria	NOUN
finefocus-533	420	24	and	and	CCONJ
finefocus-533	420	25	eukarya	eukarya	NOUN
finefocus-533	420	26	.	.	PUNCT
finefocus-533	421	1	plos	plos	PROPN
finefocus-533	421	2	one	one	NUM
finefocus-533	421	3	.	.	PUNCT
finefocus-533	421	4	8	8	NUM
finefocus-533	421	5	:	:	PUNCT
finefocus-533	421	6	e67221	e67221	NOUN
finefocus-533	421	7	.	.	PROPN
finefocus-533	421	8	39	39	NUM
finefocus-533	421	9	.	.	PUNCT
finefocus-533	422	1	singer	singer	NOUN
finefocus-533	422	2	pc	pc	NOUN
finefocus-533	422	3	,	,	PUNCT
finefocus-533	422	4	stumm	stumm	PROPN
finefocus-533	422	5	w.	w.	PROPN
finefocus-533	422	6	1970	1970	NUM
finefocus-533	422	7	.	.	PUNCT
finefocus-533	423	1	acidic	acidic	ADJ
finefocus-533	423	2	mine	mine	NOUN
finefocus-533	423	3	drainage	drainage	NOUN
finefocus-533	423	4	:	:	PUNCT
finefocus-533	423	5	the	the	DET
finefocus-533	423	6	rate	rate	NOUN
finefocus-533	423	7	-	-	PUNCT
finefocus-533	423	8	determining	determine	VERB
finefocus-533	423	9	step	step	NOUN
finefocus-533	423	10	.	.	PUNCT
finefocus-533	424	1	science	science	NOUN
finefocus-533	424	2	.	.	PUNCT
finefocus-533	425	1	167:1121–1123	167:1121–1123	NUM
finefocus-533	425	2	.	.	PUNCT
finefocus-533	426	1	65applied	65applie	VERB
finefocus-533	426	2	&	&	CCONJ
finefocus-533	426	3	environmental	environmental	ADJ
finefocus-533	426	4	microbiology	microbiology	NOUN
finefocus-533	426	5	•	•	NOUN
finefocus-533	426	6	40	40	NUM
finefocus-533	426	7	.	.	PUNCT
finefocus-533	427	1	spitzer	spitzer	PROPN
finefocus-533	427	2	m	m	PROPN
finefocus-533	427	3	,	,	PUNCT
finefocus-533	427	4	wildenhain	wildenhain	PROPN
finefocus-533	427	5	j	j	PROPN
finefocus-533	427	6	,	,	PUNCT
finefocus-533	427	7	rappsilber	rappsilber	PROPN
finefocus-533	427	8	j	j	PROPN
finefocus-533	427	9	,	,	PUNCT
finefocus-533	427	10	tyers	tyer	NOUN
finefocus-533	427	11	m.	m.	NOUN
finefocus-533	427	12	2014	2014	NUM
finefocus-533	427	13	.	.	PUNCT
finefocus-533	428	1	boxplotr	boxplotr	NOUN
finefocus-533	428	2	:	:	PUNCT
finefocus-533	428	3	a	a	DET
finefocus-533	428	4	web	web	NOUN
finefocus-533	428	5	tool	tool	NOUN
finefocus-533	428	6	for	for	ADP
finefocus-533	428	7	generation	generation	NOUN
finefocus-533	428	8	of	of	ADP
finefocus-533	428	9	box	box	NOUN
finefocus-533	428	10	plots	plot	NOUN
finefocus-533	428	11	.	.	PUNCT
finefocus-533	429	1	nat	nat	PROPN
finefocus-533	429	2	.	.	PUNCT
finefocus-533	430	1	methods	method	NOUN
finefocus-533	430	2	.	.	PUNCT
finefocus-533	431	1	11:121–122	11:121–122	NUM
finefocus-533	431	2	.	.	NOUN
finefocus-533	431	3	41	41	NUM
finefocus-533	431	4	.	.	PUNCT
finefocus-533	432	1	takai	takai	PROPN
finefocus-533	432	2	k	k	PROPN
finefocus-533	432	3	,	,	PUNCT
finefocus-533	432	4	komatsu	komatsu	PROPN
finefocus-533	432	5	t	t	PROPN
finefocus-533	432	6	,	,	PUNCT
finefocus-533	432	7	inagaki	inagaki	PROPN
finefocus-533	432	8	f	f	PROPN
finefocus-533	432	9	,	,	PUNCT
finefocus-533	432	10	horikoshi	horikoshi	PROPN
finefocus-533	432	11	k.	k.	PROPN
finefocus-533	432	12	2001	2001	NUM
finefocus-533	432	13	.	.	PUNCT
finefocus-533	433	1	distribution	distribution	NOUN
finefocus-533	433	2	of	of	ADP
finefocus-533	433	3	archaea	archaea	NOUN
finefocus-533	433	4	in	in	ADP
finefocus-533	433	5	a	a	DET
finefocus-533	433	6	black	black	ADJ
finefocus-533	433	7	smoker	smoker	NOUN
finefocus-533	433	8	chimney	chimney	NOUN
finefocus-533	433	9	structure	structure	NOUN
finefocus-533	433	10	.	.	PUNCT
finefocus-533	434	1	appl	appl	PROPN
finefocus-533	434	2	.	.	PUNCT
finefocus-533	435	1	environ	environ	PROPN
finefocus-533	435	2	.	.	PUNCT
finefocus-533	435	3	microbiol	microbiol	PROPN
finefocus-533	435	4	.	.	PUNCT
finefocus-533	436	1	67:3618–3629	67:3618–3629	NUM
finefocus-533	436	2	.	.	X
finefocus-533	437	1	42	42	NUM
finefocus-533	437	2	.	.	PUNCT
finefocus-533	438	1	thomas	thomas	PROPN
finefocus-533	438	2	mc	mc	PROPN
finefocus-533	438	3	,	,	PUNCT
finefocus-533	438	4	thomas	thomas	PROPN
finefocus-533	438	5	dk	dk	PROPN
finefocus-533	438	6	,	,	PUNCT
finefocus-533	438	7	kalmokoff	kalmokoff	PROPN
finefocus-533	438	8	ml	ml	PROPN
finefocus-533	438	9	,	,	PUNCT
finefocus-533	438	10	brooks	brooks	PROPN
finefocus-533	438	11	sp	sp	PROPN
finefocus-533	438	12	,	,	PUNCT
finefocus-533	438	13	selinger	selinger	NOUN
finefocus-533	438	14	lb	lb	NOUN
finefocus-533	438	15	,	,	PUNCT
finefocus-533	438	16	others	other	NOUN
finefocus-533	438	17	.	.	PUNCT
finefocus-533	439	1	2012	2012	NUM
finefocus-533	439	2	.	.	PUNCT
finefocus-533	440	1	molecular	molecular	ADJ
finefocus-533	440	2	methods	method	NOUN
finefocus-533	440	3	to	to	PART
finefocus-533	440	4	measure	measure	VERB
finefocus-533	440	5	intestinal	intestinal	ADJ
finefocus-533	440	6	bacteria	bacteria	NOUN
finefocus-533	440	7	:	:	PUNCT
finefocus-533	440	8	a	a	DET
finefocus-533	440	9	review	review	NOUN
finefocus-533	440	10	.	.	PUNCT
finefocus-533	441	1	j.	j.	PROPN
finefocus-533	441	2	aoac	aoac	PROPN
finefocus-533	441	3	int	int	PROPN
finefocus-533	441	4	.	.	PUNCT
finefocus-533	442	1	95:5–23	95:5–23	NUM
finefocus-533	442	2	.	.	PUNCT
finefocus-533	443	1	43	43	NUM
finefocus-533	443	2	.	.	PUNCT
finefocus-533	444	1	tyson	tyson	PROPN
finefocus-533	444	2	gw	gw	PROPN
finefocus-533	444	3	,	,	PUNCT
finefocus-533	444	4	chapman	chapman	PROPN
finefocus-533	444	5	j	j	PROPN
finefocus-533	444	6	,	,	PUNCT
finefocus-533	444	7	hugenholtz	hugenholtz	NOUN
finefocus-533	444	8	p	p	NOUN
finefocus-533	444	9	,	,	PUNCT
finefocus-533	444	10	allen	allen	PROPN
finefocus-533	444	11	ee	ee	PROPN
finefocus-533	444	12	,	,	PUNCT
finefocus-533	444	13	ram	ram	PROPN
finefocus-533	444	14	,	,	PUNCT
finefocus-533	444	15	rachna	rachna	VERB
finefocus-533	444	16	j.	j.	PROPN
finefocus-533	444	17	,	,	PUNCT
finefocus-533	444	18	richardson	richardson	PROPN
finefocus-533	444	19	pm	pm	PROPN
finefocus-533	444	20	,	,	PUNCT
finefocus-533	444	21	solovyev	solovyev	PROPN
finefocus-533	444	22	vv	vv	PROPN
finefocus-533	444	23	,	,	PUNCT
finefocus-533	444	24	rubin	rubin	PROPN
finefocus-533	444	25	em	em	PRON
finefocus-533	444	26	,	,	PUNCT
finefocus-533	444	27	rokhsar	rokhsar	VERB
finefocus-533	444	28	ds	ds	PROPN
finefocus-533	444	29	,	,	PUNCT
finefocus-533	444	30	banfield	banfield	PROPN
finefocus-533	444	31	jf	jf	PROPN
finefocus-533	444	32	.	.	PROPN
finefocus-533	444	33	2004	2004	NUM
finefocus-533	444	34	.	.	PUNCT
finefocus-533	445	1	community	community	NOUN
finefocus-533	445	2	structure	structure	NOUN
finefocus-533	445	3	and	and	CCONJ
finefocus-533	445	4	metabolism	metabolism	NOUN
finefocus-533	445	5	through	through	ADP
finefocus-533	445	6	reconstruction	reconstruction	NOUN
finefocus-533	445	7	of	of	ADP
finefocus-533	445	8	microbial	microbial	ADJ
finefocus-533	445	9	genomes	genome	NOUN
finefocus-533	445	10	from	from	ADP
finefocus-533	445	11	the	the	DET
finefocus-533	445	12	environment	environment	NOUN
finefocus-533	445	13	.	.	PUNCT
finefocus-533	446	1	nature	nature	NOUN
finefocus-533	446	2	.	.	PUNCT
finefocus-533	447	1	428:37	428:37	NUM
finefocus-533	447	2	.	.	NOUN
finefocus-533	448	1	44	44	NUM
finefocus-533	448	2	.	.	PUNCT
finefocus-533	449	1	wang	wang	PROPN
finefocus-533	449	2	q	q	PROPN
finefocus-533	449	3	,	,	PUNCT
finefocus-533	449	4	garrity	garrity	PROPN
finefocus-533	449	5	gm	gm	PROPN
finefocus-533	449	6	,	,	PUNCT
finefocus-533	449	7	tiedje	tiedje	PROPN
finefocus-533	449	8	jm	jm	PROPN
finefocus-533	449	9	,	,	PUNCT
finefocus-533	449	10	cole	cole	PROPN
finefocus-533	449	11	jr	jr	PROPN
finefocus-533	449	12	.	.	PROPN
finefocus-533	449	13	2007	2007	NUM
finefocus-533	449	14	.	.	PUNCT
finefocus-533	450	1	naive	naive	ADJ
finefocus-533	450	2	bayesian	bayesian	NOUN
finefocus-533	450	3	classifier	classifier	NOUN
finefocus-533	450	4	for	for	ADP
finefocus-533	450	5	rapid	rapid	ADJ
finefocus-533	450	6	assignment	assignment	NOUN
finefocus-533	450	7	of	of	ADP
finefocus-533	450	8	rrna	rrna	PROPN
finefocus-533	450	9	sequences	sequence	NOUN
finefocus-533	450	10	into	into	ADP
finefocus-533	450	11	the	the	DET
finefocus-533	450	12	new	new	ADJ
finefocus-533	450	13	bacterial	bacterial	ADJ
finefocus-533	450	14	taxonomy	taxonomy	NOUN
finefocus-533	450	15	.	.	PUNCT
finefocus-533	451	1	appl	appl	PROPN
finefocus-533	451	2	.	.	PUNCT
finefocus-533	452	1	environ	environ	PROPN
finefocus-533	452	2	.	.	PUNCT
finefocus-533	452	3	microbiol	microbiol	PROPN
finefocus-533	452	4	.	.	PUNCT
finefocus-533	453	1	73:5261–5267	73:5261–5267	NUM
finefocus-533	453	2	.	.	PUNCT
finefocus-533	454	1	45	45	NUM
finefocus-533	454	2	.	.	PUNCT
finefocus-533	455	1	weber	weber	PROPN
finefocus-533	455	2	ka	ka	PROPN
finefocus-533	455	3	,	,	PUNCT
finefocus-533	455	4	achenbach	achenbach	PROPN
finefocus-533	455	5	la	la	PROPN
finefocus-533	455	6	,	,	PUNCT
finefocus-533	455	7	coates	coates	PROPN
finefocus-533	455	8	jd	jd	PROPN
finefocus-533	455	9	.	.	PROPN
finefocus-533	455	10	2006	2006	NUM
finefocus-533	455	11	.	.	PUNCT
finefocus-533	456	1	microorganisms	microorganism	NOUN
finefocus-533	456	2	pumping	pump	VERB
finefocus-533	456	3	iron	iron	NOUN
finefocus-533	456	4	:	:	PUNCT
finefocus-533	456	5	anaerobic	anaerobic	ADJ
finefocus-533	456	6	microbial	microbial	ADJ
finefocus-533	456	7	iron	iron	NOUN
finefocus-533	456	8	oxidation	oxidation	NOUN
finefocus-533	456	9	and	and	CCONJ
finefocus-533	456	10	reduction	reduction	NOUN
finefocus-533	456	11	.	.	PUNCT
finefocus-533	457	1	nat	nat	PROPN
finefocus-533	457	2	.	.	PUNCT
finefocus-533	458	1	rev	rev	PROPN
finefocus-533	458	2	.	.	PROPN
finefocus-533	458	3	microbiol	microbiol	PROPN
finefocus-533	458	4	.	.	PUNCT
finefocus-533	459	1	4:752–764	4:752–764	NOUN
finefocus-533	459	2	.	.	PUNCT
finefocus-533	460	1	46	46	NUM
finefocus-533	460	2	.	.	PUNCT
finefocus-533	461	1	werner	werner	PROPN
finefocus-533	461	2	jj	jj	PROPN
finefocus-533	461	3	,	,	PUNCT
finefocus-533	461	4	zhou	zhou	PROPN
finefocus-533	461	5	d	d	PROPN
finefocus-533	461	6	,	,	PUNCT
finefocus-533	461	7	caporaso	caporaso	PROPN
finefocus-533	461	8	jg	jg	PROPN
finefocus-533	461	9	,	,	PUNCT
finefocus-533	461	10	knight	knight	NOUN
finefocus-533	461	11	r	r	PROPN
finefocus-533	461	12	,	,	PUNCT
finefocus-533	461	13	angenent	angenent	PROPN
finefocus-533	461	14	lt	lt	PROPN
finefocus-533	461	15	.	.	PROPN
finefocus-533	461	16	2012	2012	NUM
finefocus-533	461	17	.	.	PUNCT
finefocus-533	462	1	comparison	comparison	NOUN
finefocus-533	462	2	of	of	ADP
finefocus-533	462	3	illumina	illumina	PROPN
finefocus-533	462	4	paired	pair	VERB
finefocus-533	462	5	-	-	PUNCT
finefocus-533	462	6	end	end	NOUN
finefocus-533	462	7	and	and	CCONJ
finefocus-533	462	8	single	single	ADJ
finefocus-533	462	9	-	-	PUNCT
finefocus-533	462	10	direction	direction	NOUN
finefocus-533	462	11	sequencing	sequence	VERB
finefocus-533	462	12	for	for	ADP
finefocus-533	462	13	microbial	microbial	ADJ
finefocus-533	462	14	16s	16	NOUN
finefocus-533	462	15	rrna	rrna	PROPN
finefocus-533	462	16	gene	gene	NOUN
finefocus-533	462	17	amplicon	amplicon	NOUN
finefocus-533	462	18	surveys	survey	NOUN
finefocus-533	462	19	.	.	PUNCT
finefocus-533	463	1	isme	isme	PROPN
finefocus-533	463	2	j.	j.	PROPN
finefocus-533	463	3	6:1273	6:1273	PROPN
finefocus-533	463	4	.	.	PROPN
finefocus-533	463	5	47	47	NUM
finefocus-533	463	6	.	.	PUNCT
finefocus-533	464	1	willow	willow	PROPN
finefocus-533	464	2	creek	creek	PROPN
finefocus-533	464	3	reclamation	reclamation	NOUN
finefocus-533	464	4	committee	committee	NOUN
finefocus-533	464	5	.	.	PUNCT
finefocus-533	465	1	2004	2004	NUM
finefocus-533	465	2	.	.	PUNCT
finefocus-533	466	1	report	report	NOUN
finefocus-533	466	2	of	of	ADP
finefocus-533	466	3	surface	surface	NOUN
finefocus-533	466	4	and	and	CCONJ
finefocus-533	466	5	mine	mine	NOUN
finefocus-533	466	6	water	water	NOUN
finefocus-533	466	7	sampling	sampling	NOUN
finefocus-533	466	8	and	and	CCONJ
finefocus-533	466	9	monitoring	monitoring	NOUN
finefocus-533	466	10	in	in	ADP
finefocus-533	466	11	willow	willow	PROPN
finefocus-533	466	12	creek	creek	PROPN
finefocus-533	466	13	watershed	watershed	PROPN
finefocus-533	466	14	,	,	PUNCT
finefocus-533	466	15	mineral	mineral	NOUN
finefocus-533	466	16	county	county	NOUN
finefocus-533	466	17	,	,	PUNCT
finefocus-533	466	18	co	co	X
finefocus-533	466	19	(	(	PUNCT
finefocus-533	466	20	1999	1999	NUM
finefocus-533	466	21	-	-	SYM
finefocus-533	466	22	2002	2002	NUM
finefocus-533	466	23	)	)	PUNCT
finefocus-533	466	24	48	48	NUM
finefocus-533	466	25	.	.	PUNCT
finefocus-533	467	1	yamada	yamada	PROPN
finefocus-533	467	2	t	t	PROPN
finefocus-533	467	3	,	,	PUNCT
finefocus-533	467	4	sekiguchi	sekiguchi	PROPN
finefocus-533	467	5	y.	y.	PROPN
finefocus-533	467	6	2009	2009	NUM
finefocus-533	467	7	.	.	PUNCT
finefocus-533	468	1	cultivation	cultivation	NOUN
finefocus-533	468	2	of	of	ADP
finefocus-533	468	3	uncultured	uncultured	ADJ
finefocus-533	468	4	chloroflexi	chloroflexi	NOUN
finefocus-533	468	5	subphyla	subphyla	NOUN
finefocus-533	468	6	:	:	PUNCT
finefocus-533	468	7	significance	significance	NOUN
finefocus-533	468	8	and	and	CCONJ
finefocus-533	468	9	ecophysiology	ecophysiology	NOUN
finefocus-533	468	10	of	of	ADP
finefocus-533	468	11	formerly	formerly	ADV
finefocus-533	468	12	uncultured	uncultured	ADJ
finefocus-533	468	13	chloroflexi’subphylum	chloroflexi’subphylum	NOUN
finefocus-533	468	14	i’with	i’with	ADP
finefocus-533	468	15	natural	natural	ADJ
finefocus-533	468	16	and	and	CCONJ
finefocus-533	468	17	biotechnological	biotechnological	ADJ
finefocus-533	468	18	relevance	relevance	NOUN
finefocus-533	468	19	.	.	PUNCT
finefocus-533	469	1	microbes	microbe	NOUN
finefocus-533	469	2	environ	environ	PROPN
finefocus-533	469	3	.	.	PUNCT
finefocus-533	470	1	24:205–216	24:205–216	NUM
finefocus-533	470	2	.	.	PUNCT