id	sid	tid	token	lemma	pos
grj-139	1	1	a	a	DET
grj-139	1	2	public	public	ADJ
grj-139	1	3	mid	mid	ADJ
grj-139	1	4	-	-	NOUN
grj-139	1	5	density	density	NOUN
grj-139	1	6	genotyping	genotyping	NOUN
grj-139	1	7	platform	platform	NOUN
grj-139	1	8	for	for	ADP
grj-139	1	9	alfalfa	alfalfa	NOUN
grj-139	1	10	(	(	PUNCT
grj-139	1	11	medicago	medicago	PROPN
grj-139	1	12	sativa	sativa	PROPN
grj-139	1	13	l.	l.	PROPN
grj-139	1	14	)	)	PUNCT
grj-139	1	15	a	a	DET
grj-139	1	16	public	public	ADJ
grj-139	1	17	mid	mid	ADJ
grj-139	1	18	-	-	NOUN
grj-139	1	19	density	density	NOUN
grj-139	1	20	genotyping	genotyping	NOUN
grj-139	1	21	platform	platform	NOUN
grj-139	1	22	for	for	ADP
grj-139	1	23	alfalfa	alfalfa	NOUN
grj-139	1	24	(	(	PUNCT
grj-139	1	25	medicago	medicago	PROPN
grj-139	1	26	sativa	sativa	PROPN
grj-139	1	27	l.	l.	PROPN
grj-139	1	28	)	)	PUNCT
grj-139	1	29	dongyan	dongyan	PROPN
grj-139	1	30	zhao	zhao	PROPN
grj-139	1	31	1	1	NUM
grj-139	1	32	,	,	PUNCT
grj-139	1	33	katherine	katherine	PROPN
grj-139	1	34	mejia	mejia	PROPN
grj-139	1	35	-	-	PUNCT
grj-139	1	36	guerra	guerra	PROPN
grj-139	1	37	1,2	1,2	NUM
grj-139	1	38	,	,	PUNCT
grj-139	1	39	marcelo	marcelo	PROPN
grj-139	1	40	mollinari	mollinari	PROPN
grj-139	1	41	3	3	NUM
grj-139	1	42	,	,	PUNCT
grj-139	1	43	deborah	deborah	PROPN
grj-139	1	44	a	a	DET
grj-139	1	45	samac	samac	NOUN
grj-139	1	46	4	4	NUM
grj-139	1	47	,	,	PUNCT
grj-139	1	48	brian	brian	PROPN
grj-139	1	49	m	m	PROPN
grj-139	1	50	irish	irish	PROPN
grj-139	1	51	5	5	NUM
grj-139	1	52	,	,	PUNCT
grj-139	1	53	kasia	kasia	PROPN
grj-139	1	54	heller	heller	PROPN
grj-139	1	55	-	-	PUNCT
grj-139	1	56	uszynska	uszynska	PROPN
grj-139	1	57	6	6	NUM
grj-139	1	58	,	,	PUNCT
grj-139	1	59	craig	craig	PROPN
grj-139	1	60	t	t	PROPN
grj-139	1	61	beil	beil	PROPN
grj-139	1	62	1	1	NUM
grj-139	1	63	,	,	PUNCT
grj-139	1	64	moira	moira	PROPN
grj-139	1	65	j	j	PROPN
grj-139	1	66	sheehan	sheehan	PROPN
grj-139	1	67	​	​	PROPN
grj-139	1	68	✉	✉	PROPN
grj-139	1	69	1	1	NUM
grj-139	1	70	1	1	NUM
grj-139	1	71	breeding	breeding	NOUN
grj-139	1	72	insight	insight	NOUN
grj-139	1	73	,	,	PUNCT
grj-139	1	74	cornell	cornell	PROPN
grj-139	1	75	university	university	PROPN
grj-139	1	76	,	,	PUNCT
grj-139	1	77	ithaca	ithaca	PROPN
grj-139	1	78	,	,	PUNCT
grj-139	1	79	ny	ny	PROPN
grj-139	1	80	,	,	PUNCT
grj-139	1	81	14853	14853	NUM
grj-139	1	82	,	,	PUNCT
grj-139	1	83	usa	usa	PROPN
grj-139	1	84	2	2	NUM
grj-139	1	85	sarepta	sarepta	NOUN
grj-139	1	86	therapeutics	therapeutic	NOUN
grj-139	1	87	,	,	PUNCT
grj-139	1	88	cambridge	cambridge	PROPN
grj-139	1	89	,	,	PUNCT
grj-139	1	90	ma	ma	PROPN
grj-139	1	91	,	,	PUNCT
grj-139	1	92	02142	02142	NUM
grj-139	1	93	,	,	PUNCT
grj-139	1	94	usa	usa	PROPN
grj-139	1	95	3	3	NUM
grj-139	1	96	campus	campus	NOUN
grj-139	1	97	box	box	NOUN
grj-139	1	98	7609	7609	NUM
grj-139	1	99	,	,	PUNCT
grj-139	1	100	north	north	PROPN
grj-139	1	101	carolina	carolina	PROPN
grj-139	1	102	university	university	PROPN
grj-139	1	103	,	,	PUNCT
grj-139	1	104	nc	nc	PROPN
grj-139	1	105	,	,	PUNCT
grj-139	1	106	raleigh	raleigh	PROPN
grj-139	1	107	,	,	PUNCT
grj-139	1	108	27695	27695	NUM
grj-139	1	109	,	,	PUNCT
grj-139	1	110	usa	usa	PROPN
grj-139	1	111	4	4	NUM
grj-139	1	112	plant	plant	NOUN
grj-139	1	113	science	science	NOUN
grj-139	1	114	research	research	NOUN
grj-139	1	115	unit	unit	NOUN
grj-139	1	116	,	,	PUNCT
grj-139	1	117	usda	usda	PROPN
grj-139	1	118	-	-	PUNCT
grj-139	1	119	ars	ars	PROPN
grj-139	1	120	,	,	PUNCT
grj-139	1	121	st	st	PROPN
grj-139	1	122	.	.	PROPN
grj-139	1	123	paul	paul	PROPN
grj-139	1	124	,	,	PUNCT
grj-139	1	125	mn	mn	PROPN
grj-139	1	126	,	,	PUNCT
grj-139	1	127	55108	55108	NUM
grj-139	1	128	,	,	PUNCT
grj-139	1	129	usa	usa	PROPN
grj-139	1	130	5	5	NUM
grj-139	1	131	plant	plant	NOUN
grj-139	1	132	germplasm	germplasm	NOUN
grj-139	1	133	introduction	introduction	NOUN
grj-139	1	134	and	and	CCONJ
grj-139	1	135	testing	testing	NOUN
grj-139	1	136	research	research	NOUN
grj-139	1	137	unit	unit	NOUN
grj-139	1	138	,	,	PUNCT
grj-139	1	139	usda	usda	NOUN
grj-139	1	140	-	-	PUNCT
grj-139	1	141	ars	ars	PROPN
grj-139	1	142	,	,	PUNCT
grj-139	1	143	prosser	prosser	PROPN
grj-139	1	144	,	,	PUNCT
grj-139	1	145	wa	wa	PROPN
grj-139	1	146	,	,	PUNCT
grj-139	1	147	99350	99350	NUM
grj-139	1	148	,	,	PUNCT
grj-139	1	149	usa	usa	PROPN
grj-139	1	150	6	6	NUM
grj-139	1	151	diversity	diversity	NOUN
grj-139	1	152	arrays	array	VERB
grj-139	1	153	technology	technology	NOUN
grj-139	1	154	,	,	PUNCT
grj-139	1	155	bruce	bruce	PROPN
grj-139	1	156	,	,	PUNCT
grj-139	1	157	australia	australia	PROPN
grj-139	1	158	abstract	abstract	ADJ
grj-139	1	159	small	small	ADJ
grj-139	1	160	public	public	ADJ
grj-139	1	161	breeding	breeding	NOUN
grj-139	1	162	programmes	programme	NOUN
grj-139	1	163	have	have	VERB
grj-139	1	164	many	many	ADJ
grj-139	1	165	barriers	barrier	NOUN
grj-139	1	166	to	to	ADP
grj-139	1	167	adopting	adopt	VERB
grj-139	1	168	technology	technology	NOUN
grj-139	1	169	,	,	PUNCT
grj-139	1	170	particularly	particularly	ADV
grj-139	1	171	creating	create	VERB
grj-139	1	172	and	and	CCONJ
grj-139	1	173	using	use	VERB
grj-139	1	174	genetic	genetic	ADJ
grj-139	1	175	marker	marker	NOUN
grj-139	1	176	panels	panel	NOUN
grj-139	1	177	for	for	ADP
grj-139	1	178	genomic	genomic	NOUN
grj-139	1	179	-	-	PUNCT
grj-139	1	180	based	base	VERB
grj-139	1	181	decisions	decision	NOUN
grj-139	1	182	in	in	ADP
grj-139	1	183	selection	selection	NOUN
grj-139	1	184	.	.	PUNCT
grj-139	2	1	here	here	ADV
grj-139	2	2	we	we	PRON
grj-139	2	3	report	report	VERB
grj-139	2	4	the	the	DET
grj-139	2	5	creation	creation	NOUN
grj-139	2	6	of	of	ADP
grj-139	2	7	a	a	DET
grj-139	2	8	dartag	dartag	NOUN
grj-139	2	9	panel	panel	NOUN
grj-139	2	10	of	of	ADP
grj-139	2	11	3,000	3,000	NUM
grj-139	2	12	loci	loci	NOUN
grj-139	2	13	distributed	distribute	VERB
grj-139	2	14	across	across	ADP
grj-139	2	15	the	the	DET
grj-139	2	16	alfalfa	alfalfa	NOUN
grj-139	2	17	(	(	PUNCT
grj-139	2	18	medicago	medicago	PROPN
grj-139	2	19	sativa	sativa	PROPN
grj-139	2	20	l.	l.	PROPN
grj-139	2	21	)	)	PUNCT
grj-139	2	22	genome	genome	NOUN
grj-139	2	23	for	for	ADP
grj-139	2	24	use	use	NOUN
grj-139	2	25	in	in	ADP
grj-139	2	26	molecular	molecular	ADJ
grj-139	2	27	breeding	breeding	NOUN
grj-139	2	28	and	and	CCONJ
grj-139	2	29	genomic	genomic	NOUN
grj-139	2	30	insight	insight	NOUN
grj-139	2	31	.	.	PUNCT
grj-139	3	1	the	the	DET
grj-139	3	2	creation	creation	NOUN
grj-139	3	3	of	of	ADP
grj-139	3	4	this	this	DET
grj-139	3	5	marker	marker	NOUN
grj-139	3	6	panel	panel	NOUN
grj-139	3	7	brings	bring	VERB
grj-139	3	8	cost	cost	NOUN
grj-139	3	9	-	-	PUNCT
grj-139	3	10	effective	effective	ADJ
grj-139	3	11	and	and	CCONJ
grj-139	3	12	rapid	rapid	ADJ
grj-139	3	13	genotyping	genotyping	NOUN
grj-139	3	14	capabilities	capability	NOUN
grj-139	3	15	to	to	ADP
grj-139	3	16	alfalfa	alfalfa	NOUN
grj-139	3	17	breeding	breeding	NOUN
grj-139	3	18	programmes	programme	NOUN
grj-139	3	19	.	.	PUNCT
grj-139	4	1	the	the	DET
grj-139	4	2	open	open	ADJ
grj-139	4	3	access	access	NOUN
grj-139	4	4	provided	provide	VERB
grj-139	4	5	by	by	ADP
grj-139	4	6	this	this	DET
grj-139	4	7	platform	platform	NOUN
grj-139	4	8	will	will	AUX
grj-139	4	9	allow	allow	VERB
grj-139	4	10	genetic	genetic	ADJ
grj-139	4	11	data	datum	NOUN
grj-139	4	12	sets	set	NOUN
grj-139	4	13	generated	generate	VERB
grj-139	4	14	on	on	ADP
grj-139	4	15	the	the	DET
grj-139	4	16	marker	marker	NOUN
grj-139	4	17	panel	panel	NOUN
grj-139	4	18	to	to	PART
grj-139	4	19	be	be	AUX
grj-139	4	20	compared	compare	VERB
grj-139	4	21	and	and	CCONJ
grj-139	4	22	joined	join	VERB
grj-139	4	23	across	across	ADP
grj-139	4	24	projects	project	NOUN
grj-139	4	25	,	,	PUNCT
grj-139	4	26	institutions	institution	NOUN
grj-139	4	27	and	and	CCONJ
grj-139	4	28	countries	country	NOUN
grj-139	4	29	.	.	PUNCT
grj-139	5	1	this	this	DET
grj-139	5	2	genotyping	genotyping	NOUN
grj-139	5	3	resource	resource	NOUN
grj-139	5	4	has	have	VERB
grj-139	5	5	the	the	DET
grj-139	5	6	power	power	NOUN
grj-139	5	7	to	to	PART
grj-139	5	8	make	make	VERB
grj-139	5	9	routine	routine	ADJ
grj-139	5	10	genotyping	genotyping	NOUN
grj-139	5	11	a	a	DET
grj-139	5	12	reality	reality	NOUN
grj-139	5	13	for	for	ADP
grj-139	5	14	any	any	DET
grj-139	5	15	breeder	breeder	NOUN
grj-139	5	16	of	of	ADP
grj-139	5	17	alfalfa	alfalfa	NOUN
grj-139	5	18	.	.	PUNCT
grj-139	6	1	keywords	keyword	NOUN
grj-139	6	2	alfalfa	alfalfa	NOUN
grj-139	6	3	,	,	PUNCT
grj-139	6	4	amplicon	amplicon	NOUN
grj-139	6	5	-	-	PUNCT
grj-139	6	6	sequencing	sequence	VERB
grj-139	6	7	,	,	PUNCT
grj-139	6	8	plant	plant	NOUN
grj-139	6	9	breeding	breeding	NOUN
grj-139	6	10	,	,	PUNCT
grj-139	6	11	dartag	dartag	NOUN
grj-139	6	12	genotyping	genotyping	NOUN
grj-139	6	13	,	,	PUNCT
grj-139	6	14	microhaplotype	microhaplotype	NOUN
grj-139	6	15	introduction	introduction	NOUN
grj-139	6	16	molecular	molecular	ADJ
grj-139	6	17	breeding	breeding	NOUN
grj-139	6	18	techniques	technique	NOUN
grj-139	6	19	have	have	AUX
grj-139	6	20	been	be	AUX
grj-139	6	21	used	use	VERB
grj-139	6	22	for	for	ADP
grj-139	6	23	nearly	nearly	ADV
grj-139	6	24	four	four	NUM
grj-139	6	25	decades	decade	NOUN
grj-139	6	26	to	to	PART
grj-139	6	27	enhance	enhance	VERB
grj-139	6	28	and	and	CCONJ
grj-139	6	29	speed	speed	VERB
grj-139	6	30	breeding	breeding	NOUN
grj-139	6	31	efforts	effort	NOUN
grj-139	6	32	for	for	ADP
grj-139	6	33	major	major	ADJ
grj-139	6	34	staple	staple	NOUN
grj-139	6	35	food	food	NOUN
grj-139	6	36	crops	crop	NOUN
grj-139	6	37	like	like	ADP
grj-139	6	38	tomato	tomato	NOUN
grj-139	6	39	,	,	PUNCT
grj-139	6	40	maize	maize	NOUN
grj-139	6	41	and	and	CCONJ
grj-139	6	42	barley	barley	NOUN
grj-139	6	43	(	(	PUNCT
grj-139	6	44	feurerstein	feurerstein	NOUN
grj-139	6	45	,	,	PUNCT
grj-139	6	46	brown	brown	ADJ
grj-139	6	47	,	,	PUNCT
grj-139	6	48	&	&	CCONJ
grj-139	6	49	burdon	burdon	PROPN
grj-139	6	50	,	,	PUNCT
grj-139	6	51	1990	1990	NUM
grj-139	6	52	;	;	PUNCT
grj-139	6	53	hasan	hasan	PROPN
grj-139	6	54	,	,	PUNCT
grj-139	6	55	choudhary	choudhary	PROPN
grj-139	6	56	,	,	PUNCT
grj-139	6	57	naaz	naaz	PROPN
grj-139	6	58	,	,	PUNCT
grj-139	6	59	sharma	sharma	PROPN
grj-139	6	60	,	,	PUNCT
grj-139	6	61	&	&	CCONJ
grj-139	6	62	laskar	laskar	PROPN
grj-139	6	63	,	,	PUNCT
grj-139	6	64	2021	2021	NUM
grj-139	6	65	;	;	PUNCT
grj-139	6	66	helentjaris	helentjaris	PROPN
grj-139	6	67	,	,	PUNCT
grj-139	6	68	king	king	NOUN
grj-139	6	69	,	,	PUNCT
grj-139	6	70	slocum	slocum	PROPN
grj-139	6	71	,	,	PUNCT
grj-139	6	72	siedenstrang	siedenstrang	PROPN
grj-139	6	73	,	,	PUNCT
grj-139	6	74	&	&	CCONJ
grj-139	6	75	wegman	wegman	PROPN
grj-139	6	76	,	,	PUNCT
grj-139	6	77	1985	1985	NUM
grj-139	6	78	;	;	PUNCT
grj-139	6	79	tanksley	tanksley	NOUN
grj-139	6	80	,	,	PUNCT
grj-139	6	81	1983	1983	NUM
grj-139	6	82	)	)	PUNCT
grj-139	6	83	.	.	PUNCT
grj-139	7	1	over	over	ADP
grj-139	7	2	time	time	NOUN
grj-139	7	3	,	,	PUNCT
grj-139	7	4	these	these	DET
grj-139	7	5	techniques	technique	NOUN
grj-139	7	6	have	have	AUX
grj-139	7	7	been	be	AUX
grj-139	7	8	augmented	augment	VERB
grj-139	7	9	with	with	ADP
grj-139	7	10	high	high	ADJ
grj-139	7	11	-	-	PUNCT
grj-139	7	12	quality	quality	NOUN
grj-139	7	13	phenotypic	phenotypic	ADJ
grj-139	7	14	data	datum	NOUN
grj-139	7	15	to	to	PART
grj-139	7	16	perform	perform	VERB
grj-139	7	17	genome	genome	NOUN
grj-139	7	18	-	-	PUNCT
grj-139	7	19	wide	wide	ADJ
grj-139	7	20	association	association	NOUN
grj-139	7	21	studies	study	NOUN
grj-139	7	22	(	(	PUNCT
grj-139	7	23	gwas	gwas	PROPN
grj-139	7	24	)	)	PUNCT
grj-139	7	25	and	and	CCONJ
grj-139	7	26	genomic	genomic	ADJ
grj-139	7	27	selection	selection	NOUN
grj-139	7	28	and	and	CCONJ
grj-139	7	29	prediction	prediction	NOUN
grj-139	7	30	,	,	PUNCT
grj-139	7	31	further	far	ADV
grj-139	7	32	fueling	fuel	VERB
grj-139	7	33	breeding	breeding	NOUN
grj-139	7	34	for	for	ADP
grj-139	7	35	quantitative	quantitative	ADJ
grj-139	7	36	or	or	CCONJ
grj-139	7	37	complex	complex	ADJ
grj-139	7	38	traits	trait	NOUN
grj-139	7	39	(	(	PUNCT
grj-139	7	40	eathington	eathington	NOUN
grj-139	7	41	,	,	PUNCT
grj-139	7	42	crosbie	crosbie	NOUN
grj-139	7	43	,	,	PUNCT
grj-139	7	44	edwards	edwards	PROPN
grj-139	7	45	,	,	PUNCT
grj-139	7	46	reiter	reiter	PROPN
grj-139	7	47	,	,	PUNCT
grj-139	7	48	&	&	CCONJ
grj-139	7	49	bull	bull	PROPN
grj-139	7	50	,	,	PUNCT
grj-139	7	51	2007	2007	NUM
grj-139	7	52	;	;	PUNCT
grj-139	7	53	heffner	heffner	PROPN
grj-139	7	54	,	,	PUNCT
grj-139	7	55	sorrells	sorrells	PROPN
grj-139	7	56	,	,	PUNCT
grj-139	7	57	&	&	CCONJ
grj-139	7	58	jannink	jannink	PROPN
grj-139	7	59	,	,	PUNCT
grj-139	7	60	2009	2009	NUM
grj-139	7	61	;	;	PUNCT
grj-139	7	62	lorenzana	lorenzana	PROPN
grj-139	7	63	&	&	CCONJ
grj-139	7	64	bernardo	bernardo	PROPN
grj-139	7	65	,	,	PUNCT
grj-139	7	66	2009	2009	NUM
grj-139	7	67	)	)	PUNCT
grj-139	7	68	.	.	PUNCT
grj-139	8	1	while	while	SCONJ
grj-139	8	2	these	these	DET
grj-139	8	3	achievements	achievement	NOUN
grj-139	8	4	are	be	AUX
grj-139	8	5	significant	significant	ADJ
grj-139	8	6	,	,	PUNCT
grj-139	8	7	many	many	ADJ
grj-139	8	8	crop	crop	NOUN
grj-139	8	9	species	specie	NOUN
grj-139	8	10	grown	grow	VERB
grj-139	8	11	for	for	ADP
grj-139	8	12	human	human	ADJ
grj-139	8	13	consumption	consumption	NOUN
grj-139	8	14	and	and	CCONJ
grj-139	8	15	livestock	livestock	NOUN
grj-139	8	16	feed	feed	NOUN
grj-139	8	17	are	be	AUX
grj-139	8	18	still	still	ADV
grj-139	8	19	unable	unable	ADJ
grj-139	8	20	to	to	PART
grj-139	8	21	apply	apply	VERB
grj-139	8	22	these	these	DET
grj-139	8	23	techniques	technique	NOUN
grj-139	8	24	in	in	ADP
grj-139	8	25	breeding	breeding	NOUN
grj-139	8	26	efforts	effort	NOUN
grj-139	8	27	.	.	PUNCT
grj-139	9	1	many	many	ADJ
grj-139	9	2	breeders	breeder	NOUN
grj-139	9	3	would	would	AUX
grj-139	9	4	like	like	VERB
grj-139	9	5	to	to	PART
grj-139	9	6	adopt	adopt	VERB
grj-139	9	7	molecular	molecular	ADJ
grj-139	9	8	breeding	breeding	NOUN
grj-139	9	9	tools	tool	NOUN
grj-139	9	10	and	and	CCONJ
grj-139	9	11	techniques	technique	NOUN
grj-139	9	12	,	,	PUNCT
grj-139	9	13	but	but	CCONJ
grj-139	9	14	sometimes	sometimes	ADV
grj-139	9	15	doing	do	VERB
grj-139	9	16	so	so	ADV
grj-139	9	17	is	be	AUX
grj-139	9	18	hampered	hamper	VERB
grj-139	9	19	by	by	ADP
grj-139	9	20	large	large	ADJ
grj-139	9	21	barriers	barrier	NOUN
grj-139	9	22	-	-	PUNCT
grj-139	9	23	to	to	ADP
grj-139	9	24	-	-	PUNCT
grj-139	9	25	entry	entry	NOUN
grj-139	9	26	challenges	challenge	NOUN
grj-139	9	27	.	.	PUNCT
grj-139	10	1	the	the	DET
grj-139	10	2	range	range	NOUN
grj-139	10	3	of	of	ADP
grj-139	10	4	barriers	barrier	NOUN
grj-139	10	5	and	and	CCONJ
grj-139	10	6	how	how	SCONJ
grj-139	10	7	surmountable	surmountable	ADJ
grj-139	10	8	they	they	PRON
grj-139	10	9	are	be	AUX
grj-139	10	10	,	,	PUNCT
grj-139	10	11	varies	vary	VERB
grj-139	10	12	from	from	ADP
grj-139	10	13	species	specie	NOUN
grj-139	10	14	to	to	ADP
grj-139	10	15	species	specie	NOUN
grj-139	10	16	and	and	CCONJ
grj-139	10	17	is	be	AUX
grj-139	10	18	impacted	impact	VERB
grj-139	10	19	by	by	ADP
grj-139	10	20	species	specie	NOUN
grj-139	10	21	-	-	PUNCT
grj-139	10	22	specific	specific	ADJ
grj-139	10	23	challenges	challenge	NOUN
grj-139	10	24	in	in	ADP
grj-139	10	25	logistics	logistic	NOUN
grj-139	10	26	,	,	PUNCT
grj-139	10	27	technical	technical	ADJ
grj-139	10	28	know	know	NOUN
grj-139	10	29	-	-	PUNCT
grj-139	10	30	how	how	NOUN
grj-139	10	31	,	,	PUNCT
grj-139	10	32	biology	biology	NOUN
grj-139	10	33	and	and	CCONJ
grj-139	10	34	the	the	DET
grj-139	10	35	growing	grow	VERB
grj-139	10	36	environment	environment	NOUN
grj-139	10	37	.	.	PUNCT
grj-139	11	1	alfalfa	alfalfa	NOUN
grj-139	11	2	(	(	PUNCT
grj-139	11	3	medicago	medicago	PROPN
grj-139	11	4	sativa	sativa	PROPN
grj-139	11	5	l.	l.	PROPN
grj-139	11	6	)	)	PUNCT
grj-139	11	7	is	be	AUX
grj-139	11	8	the	the	DET
grj-139	11	9	most	most	ADV
grj-139	11	10	widely	widely	ADV
grj-139	11	11	grown	grow	VERB
grj-139	11	12	perennial	perennial	ADJ
grj-139	11	13	forage	forage	NOUN
grj-139	11	14	crop	crop	NOUN
grj-139	11	15	worldwide	worldwide	ADV
grj-139	11	16	(	(	PUNCT
grj-139	11	17	undersander	undersander	NOUN
grj-139	11	18	,	,	PUNCT
grj-139	11	19	2021	2021	NUM
grj-139	11	20	)	)	PUNCT
grj-139	11	21	.	.	PUNCT
grj-139	12	1	in	in	ADP
grj-139	12	2	the	the	DET
grj-139	12	3	united	united	PROPN
grj-139	12	4	states	states	PROPN
grj-139	12	5	,	,	PUNCT
grj-139	12	6	it	it	PRON
grj-139	12	7	was	be	AUX
grj-139	12	8	the	the	DET
grj-139	12	9	fourth	fourth	ADJ
grj-139	12	10	most	most	ADV
grj-139	12	11	cultivated	cultivate	VERB
grj-139	12	12	crop	crop	NOUN
grj-139	12	13	in	in	ADP
grj-139	12	14	2021	2021	NUM
grj-139	12	15	with	with	ADP
grj-139	12	16	an	an	DET
grj-139	12	17	estimated	estimate	VERB
grj-139	12	18	direct	direct	ADJ
grj-139	12	19	value	value	NOUN
grj-139	12	20	of	of	ADP
grj-139	12	21	us$11.6	us$11.6	NUM
grj-139	12	22	billion	billion	NUM
grj-139	12	23	(	(	PUNCT
grj-139	12	24	putnam	putnam	PROPN
grj-139	12	25	&	&	CCONJ
grj-139	12	26	meccage	meccage	PROPN
grj-139	12	27	,	,	PUNCT
grj-139	12	28	2022	2022	NUM
grj-139	12	29	)	)	PUNCT
grj-139	12	30	and	and	CCONJ
grj-139	12	31	ranked	rank	VERB
grj-139	12	32	first	first	ADV
grj-139	12	33	among	among	ADP
grj-139	12	34	forage	forage	NOUN
grj-139	12	35	crops	crop	NOUN
grj-139	12	36	planting	planting	NOUN
grj-139	12	37	area	area	NOUN
grj-139	12	38	with	with	ADP
grj-139	12	39	a	a	DET
grj-139	12	40	total	total	NOUN
grj-139	12	41	of	of	ADP
grj-139	12	42	14.9	14.9	NUM
grj-139	12	43	million	million	NUM
grj-139	12	44	acres	acre	NOUN
grj-139	12	45	in	in	ADP
grj-139	12	46	2022	2022	NUM
grj-139	12	47	(	(	PUNCT
grj-139	12	48	https://www.nass.usda.gov/	https://www.nass.usda.gov/	PROPN
grj-139	12	49	)	)	PUNCT
grj-139	12	50	.	.	PUNCT
grj-139	13	1	alfalfa	alfalfa	PROPN
grj-139	13	2	is	be	AUX
grj-139	13	3	a	a	DET
grj-139	13	4	key	key	ADJ
grj-139	13	5	nutritional	nutritional	ADJ
grj-139	13	6	component	component	NOUN
grj-139	13	7	for	for	ADP
grj-139	13	8	dairy	dairy	NOUN
grj-139	13	9	and	and	CCONJ
grj-139	13	10	beef	beef	NOUN
grj-139	13	11	production	production	NOUN
grj-139	13	12	because	because	SCONJ
grj-139	13	13	it	it	PRON
grj-139	13	14	contains	contain	VERB
grj-139	13	15	a	a	DET
grj-139	13	16	high	high	ADJ
grj-139	13	17	amount	amount	NOUN
grj-139	13	18	of	of	ADP
grj-139	13	19	crude	crude	ADJ
grj-139	13	20	protein	protein	NOUN
grj-139	13	21	,	,	PUNCT
grj-139	13	22	provides	provide	VERB
grj-139	13	23	dietary	dietary	ADJ
grj-139	13	24	fibre	fibre	NOUN
grj-139	13	25	needed	need	VERB
grj-139	13	26	to	to	PART
grj-139	13	27	maintain	maintain	VERB
grj-139	13	28	rumen	ruman	NOUN
grj-139	13	29	health	health	NOUN
grj-139	13	30	,	,	PUNCT
grj-139	13	31	and	and	CCONJ
grj-139	13	32	is	be	AUX
grj-139	13	33	an	an	DET
grj-139	13	34	excellent	excellent	ADJ
grj-139	13	35	source	source	NOUN
grj-139	13	36	of	of	ADP
grj-139	13	37	vitamins	vitamin	NOUN
grj-139	13	38	and	and	CCONJ
grj-139	13	39	minerals	mineral	NOUN
grj-139	13	40	.	.	PUNCT
grj-139	14	1	in	in	ADP
grj-139	14	2	addition	addition	NOUN
grj-139	14	3	,	,	PUNCT
grj-139	14	4	it	it	PRON
grj-139	14	5	is	be	AUX
grj-139	14	6	unparalleled	unparalleled	ADJ
grj-139	14	7	as	as	ADP
grj-139	14	8	a	a	DET
grj-139	14	9	component	component	NOUN
grj-139	14	10	of	of	ADP
grj-139	14	11	sustainable	sustainable	ADJ
grj-139	14	12	agricultural	agricultural	ADJ
grj-139	14	13	systems	system	NOUN
grj-139	14	14	because	because	SCONJ
grj-139	14	15	of	of	ADP
grj-139	14	16	its	its	PRON
grj-139	14	17	ability	ability	NOUN
grj-139	14	18	to	to	PART
grj-139	14	19	fix	fix	VERB
grj-139	14	20	nitrogen	nitrogen	NOUN
grj-139	14	21	,	,	PUNCT
grj-139	14	22	protect	protect	VERB
grj-139	14	23	water	water	NOUN
grj-139	14	24	quality	quality	NOUN
grj-139	14	25	,	,	PUNCT
grj-139	14	26	interrupt	interrupt	ADJ
grj-139	14	27	pest	pest	NOUN
grj-139	14	28	and	and	CCONJ
grj-139	14	29	pathogen	pathogen	NOUN
grj-139	14	30	cycles	cycle	NOUN
grj-139	14	31	in	in	ADP
grj-139	14	32	annual	annual	ADJ
grj-139	14	33	crops	crop	NOUN
grj-139	14	34	,	,	PUNCT
grj-139	14	35	and	and	CCONJ
grj-139	14	36	improve	improve	VERB
grj-139	14	37	soil	soil	NOUN
grj-139	14	38	carbon	carbon	NOUN
grj-139	14	39	storage	storage	NOUN
grj-139	14	40	(	(	PUNCT
grj-139	14	41	fernandez	fernandez	PROPN
grj-139	14	42	,	,	PUNCT
grj-139	14	43	sheaffer	sheaffer	NOUN
grj-139	14	44	,	,	PUNCT
grj-139	14	45	tautges	tautge	NOUN
grj-139	14	46	,	,	PUNCT
grj-139	14	47	putnam	putnam	PROPN
grj-139	14	48	,	,	PUNCT
grj-139	14	49	&	&	CCONJ
grj-139	14	50	hunter	hunter	NOUN
grj-139	14	51	,	,	PUNCT
grj-139	14	52	2019	2019	NUM
grj-139	14	53	)	)	PUNCT
grj-139	14	54	.	.	PUNCT
grj-139	15	1	alfalfa	alfalfa	PROPN
grj-139	15	2	is	be	AUX
grj-139	15	3	adapted	adapt	VERB
grj-139	15	4	to	to	ADP
grj-139	15	5	different	different	ADJ
grj-139	15	6	growth	growth	NOUN
grj-139	15	7	environments	environment	NOUN
grj-139	15	8	and	and	CCONJ
grj-139	15	9	depending	depend	VERB
grj-139	15	10	on	on	ADP
grj-139	15	11	location	location	NOUN
grj-139	15	12	and	and	CCONJ
grj-139	15	13	management	management	NOUN
grj-139	15	14	,	,	PUNCT
grj-139	15	15	is	be	AUX
grj-139	15	16	highly	highly	ADV
grj-139	15	17	persistent	persistent	ADJ
grj-139	15	18	.	.	PUNCT
grj-139	16	1	as	as	ADP
grj-139	16	2	a	a	DET
grj-139	16	3	highly	highly	ADV
grj-139	16	4	heterozygous	heterozygous	ADJ
grj-139	16	5	outcrossing	outcrosse	VERB
grj-139	16	6	autotetraploid	autotetraploid	ADJ
grj-139	16	7	species	specie	NOUN
grj-139	16	8	,	,	PUNCT
grj-139	16	9	alfalfa	alfalfa	PROPN
grj-139	16	10	features	feature	VERB
grj-139	16	11	a	a	DET
grj-139	16	12	predominant	predominant	ADJ
grj-139	16	13	pattern	pattern	NOUN
grj-139	16	14	of	of	ADP
grj-139	16	15	random	random	ADJ
grj-139	16	16	chromosome	chromosome	NOUN
grj-139	16	17	pairing	pair	VERB
grj-139	16	18	during	during	ADP
grj-139	16	19	meiosis	meiosis	NOUN
grj-139	16	20	.	.	PUNCT
grj-139	17	1	the	the	DET
grj-139	17	2	four	four	NUM
grj-139	17	3	sets	set	NOUN
grj-139	17	4	of	of	ADP
grj-139	17	5	chromosomes	chromosome	NOUN
grj-139	17	6	add	add	VERB
grj-139	17	7	a	a	DET
grj-139	17	8	layer	layer	NOUN
grj-139	17	9	of	of	ADP
grj-139	17	10	complexity	complexity	NOUN
grj-139	17	11	to	to	ADP
grj-139	17	12	genotyping	genotype	VERB
grj-139	17	13	endeavours	endeavour	NOUN
grj-139	17	14	.	.	PUNCT
grj-139	18	1	traditional	traditional	ADJ
grj-139	18	2	snp	snp	ADJ
grj-139	18	3	marker	marker	NOUN
grj-139	18	4	systems	system	NOUN
grj-139	18	5	,	,	PUNCT
grj-139	18	6	primarily	primarily	ADV
grj-139	18	7	designed	design	VERB
grj-139	18	8	for	for	ADP
grj-139	18	9	diploid	diploid	ADJ
grj-139	18	10	species	specie	NOUN
grj-139	18	11	,	,	PUNCT
grj-139	18	12	often	often	ADV
grj-139	18	13	fall	fall	VERB
grj-139	18	14	short	short	ADJ
grj-139	18	15	when	when	SCONJ
grj-139	18	16	applied	apply	VERB
grj-139	18	17	to	to	ADP
grj-139	18	18	alfalfa	alfalfa	NOUN
grj-139	18	19	due	due	ADP
grj-139	18	20	to	to	ADP
grj-139	18	21	their	their	PRON
grj-139	18	22	inability	inability	NOUN
grj-139	18	23	to	to	PART
grj-139	18	24	identify	identify	VERB
grj-139	18	25	allelic	allelic	ADJ
grj-139	18	26	dosages	dosage	NOUN
grj-139	18	27	accurately	accurately	ADV
grj-139	18	28	.	.	PUNCT
grj-139	19	1	thus	thus	ADV
grj-139	19	2	,	,	PUNCT
grj-139	19	3	the	the	DET
grj-139	19	4	intricacies	intricacy	NOUN
grj-139	19	5	of	of	ADP
grj-139	19	6	alfalfa	alfalfa	NOUN
grj-139	19	7	's	's	PART
grj-139	19	8	genetic	genetic	ADJ
grj-139	19	9	structure	structure	NOUN
grj-139	19	10	call	call	NOUN
grj-139	19	11	for	for	ADP
grj-139	19	12	more	more	ADV
grj-139	19	13	sophisticated	sophisticated	ADJ
grj-139	19	14	snp	snp	ADJ
grj-139	19	15	genotyping	genotyping	NOUN
grj-139	19	16	systems	system	NOUN
grj-139	19	17	capable	capable	ADJ
grj-139	19	18	of	of	ADP
grj-139	19	19	addressing	address	VERB
grj-139	19	20	the	the	DET
grj-139	19	21	unique	unique	ADJ
grj-139	19	22	challenges	challenge	NOUN
grj-139	19	23	posed	pose	VERB
grj-139	19	24	by	by	ADP
grj-139	19	25	its	its	PRON
grj-139	19	26	autotetraploid	autotetraploid	ADJ
grj-139	19	27	nature	nature	NOUN
grj-139	19	28	.	.	PUNCT
grj-139	20	1	the	the	DET
grj-139	20	2	investment	investment	NOUN
grj-139	20	3	cost	cost	NOUN
grj-139	20	4	and	and	CCONJ
grj-139	20	5	reliance	reliance	NOUN
grj-139	20	6	upon	upon	SCONJ
grj-139	20	7	skilled	skilled	ADJ
grj-139	20	8	bioinformatics	bioinformatics	NOUN
grj-139	20	9	support	support	NOUN
grj-139	20	10	for	for	ADP
grj-139	20	11	each	each	DET
grj-139	20	12	genotyping	genotyping	NOUN
grj-139	20	13	run	run	NOUN
grj-139	20	14	,	,	PUNCT
grj-139	20	15	make	make	VERB
grj-139	20	16	this	this	PRON
grj-139	20	17	a	a	DET
grj-139	20	18	high	high	ADJ
grj-139	20	19	-	-	PUNCT
grj-139	20	20	risk	risk	NOUN
grj-139	20	21	technology	technology	NOUN
grj-139	20	22	for	for	SCONJ
grj-139	20	23	breeders	breeder	NOUN
grj-139	20	24	to	to	PART
grj-139	20	25	adopt	adopt	VERB
grj-139	20	26	.	.	PUNCT
grj-139	21	1	currently	currently	ADV
grj-139	21	2	,	,	PUNCT
grj-139	21	3	most	most	ADJ
grj-139	21	4	alfalfa	alfalfa	NOUN
grj-139	21	5	cultivars	cultivar	NOUN
grj-139	21	6	are	be	AUX
grj-139	21	7	synthetic	synthetic	ADJ
grj-139	21	8	populations	population	NOUN
grj-139	21	9	developed	develop	VERB
grj-139	21	10	by	by	ADP
grj-139	21	11	multiple	multiple	ADJ
grj-139	21	12	cycles	cycle	NOUN
grj-139	21	13	of	of	ADP
grj-139	21	14	phenotypic	phenotypic	ADJ
grj-139	21	15	selection	selection	NOUN
grj-139	21	16	for	for	ADP
grj-139	21	17	desired	desire	VERB
grj-139	21	18	traits	trait	NOUN
grj-139	21	19	.	.	PUNCT
grj-139	22	1	evaluation	evaluation	NOUN
grj-139	22	2	for	for	ADP
grj-139	22	3	biomass	biomass	NOUN
grj-139	22	4	yield	yield	NOUN
grj-139	22	5	,	,	PUNCT
grj-139	22	6	winter	winter	NOUN
grj-139	22	7	survival	survival	NOUN
grj-139	22	8	,	,	PUNCT
grj-139	22	9	grow	grow	VERB
grj-139	22	10	back	back	ADV
grj-139	22	11	,	,	PUNCT
grj-139	22	12	disease	disease	NOUN
grj-139	22	13	resistance	resistance	NOUN
grj-139	22	14	and	and	CCONJ
grj-139	22	15	forage	forage	NOUN
grj-139	22	16	nutritional	nutritional	ADJ
grj-139	22	17	quality	quality	NOUN
grj-139	22	18	among	among	ADP
grj-139	22	19	other	other	ADJ
grj-139	22	20	traits	trait	NOUN
grj-139	22	21	is	be	AUX
grj-139	22	22	a	a	DET
grj-139	22	23	multi	multi	ADJ
grj-139	22	24	-	-	ADJ
grj-139	22	25	year	year	NOUN
grj-139	22	26	process	process	NOUN
grj-139	22	27	before	before	ADP
grj-139	22	28	cultivar	cultivar	NOUN
grj-139	22	29	registration	registration	NOUN
grj-139	22	30	and	and	CCONJ
grj-139	22	31	commercial	commercial	ADJ
grj-139	22	32	seed	seed	NOUN
grj-139	22	33	production	production	NOUN
grj-139	22	34	.	.	PUNCT
grj-139	23	1	breeding	breeding	NOUN
grj-139	23	2	programmes	programme	NOUN
grj-139	23	3	have	have	AUX
grj-139	23	4	operated	operate	VERB
grj-139	23	5	with	with	ADP
grj-139	23	6	half	half	ADJ
grj-139	23	7	-	-	PUNCT
grj-139	23	8	sib	sib	NOUN
grj-139	23	9	populations	population	NOUN
grj-139	23	10	originating	originate	VERB
grj-139	23	11	from	from	ADP
grj-139	23	12	polycrosses	polycrosse	NOUN
grj-139	23	13	,	,	PUNCT
grj-139	23	14	where	where	SCONJ
grj-139	23	15	only	only	ADV
grj-139	23	16	the	the	DET
grj-139	23	17	maternal	maternal	ADJ
grj-139	23	18	parent	parent	NOUN
grj-139	23	19	is	be	AUX
grj-139	23	20	known	know	VERB
grj-139	23	21	,	,	PUNCT
grj-139	23	22	and	and	CCONJ
grj-139	23	23	the	the	DET
grj-139	23	24	paternal	paternal	ADJ
grj-139	23	25	parent	parent	NOUN
grj-139	23	26	can	can	AUX
grj-139	23	27	range	range	VERB
grj-139	23	28	from	from	ADP
grj-139	23	29	a	a	DET
grj-139	23	30	few	few	ADJ
grj-139	23	31	individuals	individual	NOUN
grj-139	23	32	up	up	ADP
grj-139	23	33	to	to	ADP
grj-139	23	34	hundreds	hundred	NOUN
grj-139	23	35	.	.	PUNCT
grj-139	24	1	unfortunately	unfortunately	ADV
grj-139	24	2	,	,	PUNCT
grj-139	24	3	breeding	breed	VERB
grj-139	24	4	for	for	ADP
grj-139	24	5	yield	yield	NOUN
grj-139	24	6	gains	gain	NOUN
grj-139	24	7	in	in	ADP
grj-139	24	8	alfalfa	alfalfa	NOUN
grj-139	24	9	using	use	VERB
grj-139	24	10	traditional	traditional	ADJ
grj-139	24	11	phenotypic	phenotypic	ADJ
grj-139	24	12	evaluation	evaluation	NOUN
grj-139	24	13	and	and	CCONJ
grj-139	24	14	recurrent	recurrent	ADJ
grj-139	24	15	selection	selection	NOUN
grj-139	24	16	methods	method	NOUN
grj-139	24	17	has	have	AUX
grj-139	24	18	hit	hit	VERB
grj-139	24	19	a	a	DET
grj-139	24	20	plateau	plateau	NOUN
grj-139	24	21	partly	partly	ADV
grj-139	24	22	due	due	ADP
grj-139	24	23	to	to	ADP
grj-139	24	24	its	its	PRON
grj-139	24	25	highly	highly	ADV
grj-139	24	26	heterozygous	heterozygous	ADJ
grj-139	24	27	and	and	CCONJ
grj-139	24	28	heterogeneous	heterogeneous	ADJ
grj-139	24	29	population	population	NOUN
grj-139	24	30	-	-	PUNCT
grj-139	24	31	level	level	NOUN
grj-139	24	32	breeding	breeding	NOUN
grj-139	24	33	.	.	PUNCT
grj-139	25	1	community	community	NOUN
grj-139	25	2	genomic	genomic	NOUN
grj-139	25	3	tools	tool	NOUN
grj-139	25	4	like	like	ADP
grj-139	25	5	those	those	PRON
grj-139	25	6	in	in	ADP
grj-139	25	7	the	the	DET
grj-139	25	8	‘	'	PUNCT
grj-139	25	9	tools	tool	NOUN
grj-139	25	10	for	for	ADP
grj-139	25	11	polyploids	polyploid	NOUN
grj-139	25	12	’	'	PUNCT
grj-139	25	13	project	project	NOUN
grj-139	25	14	(	(	PUNCT
grj-139	25	15	https://www.polyploids.org/	https://www.polyploids.org/	X
grj-139	25	16	)	)	PUNCT
grj-139	25	17	or	or	CCONJ
grj-139	25	18	developed	develop	VERB
grj-139	25	19	in	in	ADP
grj-139	25	20	other	other	ADJ
grj-139	25	21	polyploid	polyploid	NOUN
grj-139	25	22	outcrossing	outcrosse	VERB
grj-139	25	23	crops	crop	NOUN
grj-139	25	24	have	have	AUX
grj-139	25	25	shown	show	VERB
grj-139	25	26	promise	promise	NOUN
grj-139	25	27	in	in	ADP
grj-139	25	28	accelerating	accelerate	VERB
grj-139	25	29	breeding	breeding	NOUN
grj-139	25	30	and	and	CCONJ
grj-139	25	31	yield	yield	VERB
grj-139	25	32	gains	gain	NOUN
grj-139	25	33	(	(	PUNCT
grj-139	25	34	ferrão	ferrão	ADJ
grj-139	25	35	,	,	PUNCT
grj-139	25	36	amadeu	amadeu	NOUN
grj-139	25	37	,	,	PUNCT
grj-139	25	38	benevenuto	benevenuto	PROPN
grj-139	25	39	,	,	PUNCT
grj-139	25	40	oliveira	oliveira	PROPN
grj-139	25	41	,	,	PUNCT
grj-139	25	42	&	&	CCONJ
grj-139	25	43	munoz	munoz	PROPN
grj-139	25	44	,	,	PUNCT
grj-139	25	45	2021	2021	NUM
grj-139	25	46	)	)	PUNCT
grj-139	25	47	.	.	PUNCT
grj-139	26	1	the	the	DET
grj-139	26	2	creation	creation	NOUN
grj-139	26	3	of	of	ADP
grj-139	26	4	genomic	genomic	ADJ
grj-139	26	5	tools	tool	NOUN
grj-139	26	6	that	that	PRON
grj-139	26	7	account	account	VERB
grj-139	26	8	for	for	ADP
grj-139	26	9	the	the	DET
grj-139	26	10	biological	biological	ADJ
grj-139	26	11	and	and	CCONJ
grj-139	26	12	logistic	logistic	ADJ
grj-139	26	13	challenges	challenge	NOUN
grj-139	26	14	of	of	ADP
grj-139	26	15	the	the	DET
grj-139	26	16	crop	crop	NOUN
grj-139	26	17	,	,	PUNCT
grj-139	26	18	has	have	VERB
grj-139	26	19	the	the	DET
grj-139	26	20	potential	potential	NOUN
grj-139	26	21	to	to	PART
grj-139	26	22	significantly	significantly	ADV
grj-139	26	23	improve	improve	VERB
grj-139	26	24	yield	yield	NOUN
grj-139	26	25	gains	gain	NOUN
grj-139	26	26	in	in	ADP
grj-139	26	27	alfalfa	alfalfa	NOUN
grj-139	26	28	through	through	ADP
grj-139	26	29	breeding	breeding	NOUN
grj-139	26	30	.	.	PUNCT
grj-139	27	1	the	the	DET
grj-139	27	2	first	first	ADJ
grj-139	27	3	and	and	CCONJ
grj-139	27	4	typically	typically	ADV
grj-139	27	5	most	most	ADV
grj-139	27	6	tractable	tractable	ADJ
grj-139	27	7	place	place	NOUN
grj-139	27	8	to	to	PART
grj-139	27	9	build	build	VERB
grj-139	27	10	capacity	capacity	NOUN
grj-139	27	11	and	and	CCONJ
grj-139	27	12	tools	tool	NOUN
grj-139	27	13	for	for	ADP
grj-139	27	14	molecular	molecular	ADJ
grj-139	27	15	breeding	breeding	NOUN
grj-139	27	16	is	be	AUX
grj-139	27	17	to	to	PART
grj-139	27	18	begin	begin	VERB
grj-139	27	19	by	by	ADP
grj-139	27	20	creating	create	VERB
grj-139	27	21	a	a	DET
grj-139	27	22	rapid	rapid	ADJ
grj-139	27	23	genotyping	genotyping	NOUN
grj-139	27	24	pipeline	pipeline	NOUN
grj-139	27	25	that	that	PRON
grj-139	27	26	fits	fit	VERB
grj-139	27	27	within	within	ADP
grj-139	27	28	both	both	CCONJ
grj-139	27	29	the	the	DET
grj-139	27	30	breeding	breeding	NOUN
grj-139	27	31	cycle	cycle	NOUN
grj-139	27	32	and	and	CCONJ
grj-139	27	33	the	the	DET
grj-139	27	34	selection	selection	NOUN
grj-139	27	35	cycle	cycle	NOUN
grj-139	27	36	and	and	CCONJ
grj-139	27	37	can	can	AUX
grj-139	27	38	deliver	deliver	VERB
grj-139	27	39	on	on	ADP
grj-139	27	40	the	the	DET
grj-139	27	41	breeder	breeder	NOUN
grj-139	27	42	’s	’s	PART
grj-139	27	43	objectives	objective	NOUN
grj-139	27	44	(	(	PUNCT
grj-139	27	45	hawkins	hawkins	PROPN
grj-139	27	46	&	&	CCONJ
grj-139	27	47	yu	yu	PROPN
grj-139	27	48	,	,	PUNCT
grj-139	27	49	2018	2018	NUM
grj-139	27	50	;	;	PUNCT
grj-139	27	51	mejia	mejia	PROPN
grj-139	27	52	-	-	PUNCT
grj-139	27	53	guerra	guerra	PROPN
grj-139	27	54	,	,	PUNCT
grj-139	27	55	zhao	zhao	PROPN
grj-139	27	56	,	,	PUNCT
grj-139	27	57	&	&	CCONJ
grj-139	27	58	sheehan	sheehan	PROPN
grj-139	27	59	,	,	PUNCT
grj-139	27	60	2021	2021	NUM
grj-139	27	61	)	)	PUNCT
grj-139	27	62	.	.	PUNCT
grj-139	28	1	as	as	SCONJ
grj-139	28	2	stated	state	VERB
grj-139	28	3	here	here	ADV
grj-139	28	4	,	,	PUNCT
grj-139	28	5	a	a	DET
grj-139	28	6	pipeline	pipeline	NOUN
grj-139	28	7	refers	refer	VERB
grj-139	28	8	to	to	ADP
grj-139	28	9	a	a	DET
grj-139	28	10	complete	complete	ADJ
grj-139	28	11	workflow	workflow	NOUN
grj-139	28	12	starting	start	VERB
grj-139	28	13	with	with	ADP
grj-139	28	14	a	a	DET
grj-139	28	15	genetic	genetic	ADJ
grj-139	28	16	marker	marker	NOUN
grj-139	28	17	platform	platform	NOUN
grj-139	28	18	,	,	PUNCT
grj-139	28	19	vendors	vendor	NOUN
grj-139	28	20	for	for	ADP
grj-139	28	21	service	service	NOUN
grj-139	28	22	and	and	CCONJ
grj-139	28	23	bioinformatic	bioinformatic	ADJ
grj-139	28	24	tools	tool	NOUN
grj-139	28	25	to	to	PART
grj-139	28	26	transform	transform	VERB
grj-139	28	27	returned	return	VERB
grj-139	28	28	raw	raw	ADJ
grj-139	28	29	data	datum	NOUN
grj-139	28	30	into	into	ADP
grj-139	28	31	a	a	DET
grj-139	28	32	usable	usable	ADJ
grj-139	28	33	format	format	NOUN
grj-139	28	34	for	for	ADP
grj-139	28	35	breeders	breeder	NOUN
grj-139	28	36	.	.	PUNCT
grj-139	29	1	there	there	PRON
grj-139	29	2	are	be	VERB
grj-139	29	3	several	several	ADJ
grj-139	29	4	factors	factor	NOUN
grj-139	29	5	to	to	PART
grj-139	29	6	consider	consider	VERB
grj-139	29	7	when	when	SCONJ
grj-139	29	8	choosing	choose	VERB
grj-139	29	9	a	a	DET
grj-139	29	10	genetic	genetic	ADJ
grj-139	29	11	marker	marker	NOUN
grj-139	29	12	platform	platform	NOUN
grj-139	29	13	:	:	PUNCT
grj-139	29	14	cost	cost	NOUN
grj-139	29	15	per	per	ADP
grj-139	29	16	data	datum	NOUN
grj-139	29	17	point	point	NOUN
grj-139	29	18	,	,	PUNCT
grj-139	29	19	vendor	vendor	NOUN
grj-139	29	20	services	service	NOUN
grj-139	29	21	,	,	PUNCT
grj-139	29	22	turnaround	turnaround	NOUN
grj-139	29	23	times	time	NOUN
grj-139	29	24	and	and	CCONJ
grj-139	29	25	what	what	PRON
grj-139	29	26	genetic	genetic	ADJ
grj-139	29	27	analyses	analysis	NOUN
grj-139	29	28	can	can	AUX
grj-139	29	29	be	be	AUX
grj-139	29	30	done	do	VERB
grj-139	29	31	with	with	ADP
grj-139	29	32	the	the	DET
grj-139	29	33	resulting	result	VERB
grj-139	29	34	data	datum	NOUN
grj-139	29	35	.	.	PUNCT
grj-139	30	1	for	for	ADP
grj-139	30	2	alfalfa	alfalfa	NOUN
grj-139	30	3	,	,	PUNCT
grj-139	30	4	we	we	PRON
grj-139	30	5	determined	determine	VERB
grj-139	30	6	that	that	SCONJ
grj-139	30	7	a	a	DET
grj-139	30	8	targeted	target	VERB
grj-139	30	9	-	-	PUNCT
grj-139	30	10	amplicon	amplicon	NOUN
grj-139	30	11	sequenced	sequence	VERB
grj-139	30	12	-	-	PUNCT
grj-139	30	13	based	base	VERB
grj-139	30	14	approach	approach	NOUN
grj-139	30	15	would	would	AUX
grj-139	30	16	be	be	AUX
grj-139	30	17	the	the	DET
grj-139	30	18	most	most	ADV
grj-139	30	19	beneficial	beneficial	ADJ
grj-139	30	20	for	for	ADP
grj-139	30	21	breeders	breeder	NOUN
grj-139	30	22	.	.	PUNCT
grj-139	31	1	unlike	unlike	ADP
grj-139	31	2	genotyping	genotyping	NOUN
grj-139	31	3	-	-	PUNCT
grj-139	31	4	by	by	ADP
grj-139	31	5	-	-	PUNCT
grj-139	31	6	sequencing	sequence	VERB
grj-139	31	7	(	(	PUNCT
grj-139	31	8	gbs	gbs	NOUN
grj-139	31	9	)	)	PUNCT
grj-139	31	10	,	,	PUNCT
grj-139	31	11	targeted	target	VERB
grj-139	31	12	,	,	PUNCT
grj-139	31	13	amplicon	amplicon	NOUN
grj-139	31	14	-	-	PUNCT
grj-139	31	15	based	base	VERB
grj-139	31	16	genotyping	genotyping	NOUN
grj-139	31	17	technologies	technology	NOUN
grj-139	31	18	such	such	ADJ
grj-139	31	19	as	as	ADP
grj-139	31	20	dartag	dartag	NOUN
grj-139	31	21	(	(	PUNCT
grj-139	31	22	diversity	diversity	NOUN
grj-139	31	23	array	array	VERB
grj-139	31	24	technology	technology	NOUN
grj-139	31	25	dart	dart	PROPN
grj-139	31	26	)	)	PUNCT
grj-139	31	27	,	,	PUNCT
grj-139	31	28	and	and	CCONJ
grj-139	31	29	capture	capture	NOUN
grj-139	31	30	-	-	PUNCT
grj-139	31	31	seq	seq	NOUN
grj-139	31	32	(	(	PUNCT
grj-139	31	33	lgc	lgc	ADJ
grj-139	31	34	genomics	genomic	NOUN
grj-139	31	35	)	)	PUNCT
grj-139	31	36	have	have	VERB
grj-139	31	37	low	low	ADJ
grj-139	31	38	missing	miss	VERB
grj-139	31	39	data	datum	NOUN
grj-139	31	40	rates	rate	NOUN
grj-139	31	41	and	and	CCONJ
grj-139	31	42	query	query	VERB
grj-139	31	43	the	the	DET
grj-139	31	44	same	same	ADJ
grj-139	31	45	exact	exact	ADJ
grj-139	31	46	loci	locus	NOUN
grj-139	31	47	in	in	ADP
grj-139	31	48	all	all	DET
grj-139	31	49	samples	sample	NOUN
grj-139	31	50	across	across	ADP
grj-139	31	51	genotyping	genotyping	NOUN
grj-139	31	52	projects	project	NOUN
grj-139	31	53	,	,	PUNCT
grj-139	31	54	allowing	allow	VERB
grj-139	31	55	new	new	ADJ
grj-139	31	56	data	datum	NOUN
grj-139	31	57	to	to	PART
grj-139	31	58	be	be	AUX
grj-139	31	59	easily	easily	ADV
grj-139	31	60	appended	append	VERB
grj-139	31	61	to	to	ADP
grj-139	31	62	existing	exist	VERB
grj-139	31	63	data	datum	NOUN
grj-139	31	64	(	(	PUNCT
grj-139	31	65	darrier	darrier	PROPN
grj-139	31	66	et	et	PROPN
grj-139	31	67	al	al	PROPN
grj-139	31	68	.	.	PROPN
grj-139	31	69	,	,	PUNCT
grj-139	31	70	2019	2019	NUM
grj-139	31	71	;	;	PUNCT
grj-139	31	72	telfer	telfer	PROPN
grj-139	31	73	et	et	PROPN
grj-139	31	74	al	al	PROPN
grj-139	31	75	.	.	PROPN
grj-139	31	76	,	,	PUNCT
grj-139	31	77	2019	2019	NUM
grj-139	31	78	;	;	PUNCT
grj-139	32	1	wang	wang	PROPN
grj-139	32	2	et	et	PROPN
grj-139	32	3	al	al	PROPN
grj-139	32	4	.	.	PROPN
grj-139	32	5	,	,	PUNCT
grj-139	32	6	2020	2020	NUM
grj-139	32	7	)	)	PUNCT
grj-139	32	8	.	.	PUNCT
grj-139	33	1	the	the	DET
grj-139	33	2	amount	amount	NOUN
grj-139	33	3	of	of	ADP
grj-139	33	4	data	datum	NOUN
grj-139	33	5	returned	return	VERB
grj-139	33	6	is	be	AUX
grj-139	33	7	in	in	ADP
grj-139	33	8	the	the	DET
grj-139	33	9	tens	ten	NOUN
grj-139	33	10	of	of	ADP
grj-139	33	11	thousands	thousand	NOUN
grj-139	33	12	or	or	CCONJ
grj-139	33	13	less	less	ADJ
grj-139	33	14	,	,	PUNCT
grj-139	33	15	rather	rather	ADV
grj-139	33	16	than	than	ADP
grj-139	33	17	the	the	DET
grj-139	33	18	millions	million	NOUN
grj-139	33	19	of	of	ADP
grj-139	33	20	reads	read	NOUN
grj-139	33	21	from	from	ADP
grj-139	33	22	gbs	gbs	PROPN
grj-139	33	23	,	,	PUNCT
grj-139	33	24	simplifying	simplify	VERB
grj-139	33	25	downstream	downstream	ADJ
grj-139	33	26	bioinformatics	bioinformatics	NOUN
grj-139	33	27	processing	processing	NOUN
grj-139	33	28	(	(	PUNCT
grj-139	33	29	darrier	darrier	PROPN
grj-139	33	30	et	et	PROPN
grj-139	33	31	al	al	PROPN
grj-139	33	32	.	.	PROPN
grj-139	33	33	,	,	PUNCT
grj-139	33	34	2019	2019	NUM
grj-139	33	35	;	;	PUNCT
grj-139	33	36	milner	milner	NOUN
grj-139	33	37	et	et	PROPN
grj-139	33	38	al	al	PROPN
grj-139	33	39	.	.	PROPN
grj-139	33	40	,	,	PUNCT
grj-139	33	41	2019	2019	NUM
grj-139	33	42	)	)	PUNCT
grj-139	33	43	.	.	PUNCT
grj-139	34	1	this	this	PRON
grj-139	34	2	in	in	ADP
grj-139	34	3	turn	turn	NOUN
grj-139	34	4	speeds	speed	VERB
grj-139	34	5	up	up	ADP
grj-139	34	6	the	the	DET
grj-139	34	7	analysis	analysis	NOUN
grj-139	34	8	time	time	NOUN
grj-139	34	9	for	for	ADP
grj-139	34	10	marker	marker	NOUN
grj-139	34	11	-	-	PUNCT
grj-139	34	12	assisted	assist	VERB
grj-139	34	13	selection	selection	NOUN
grj-139	34	14	(	(	PUNCT
grj-139	34	15	mas	mas	PROPN
grj-139	34	16	)	)	PUNCT
grj-139	34	17	,	,	PUNCT
grj-139	34	18	introgression	introgression	NOUN
grj-139	34	19	tracking	tracking	NOUN
grj-139	34	20	,	,	PUNCT
grj-139	34	21	linkage	linkage	NOUN
grj-139	34	22	mapping	mapping	NOUN
grj-139	34	23	and	and	CCONJ
grj-139	34	24	genomic	genomic	ADJ
grj-139	34	25	prediction	prediction	NOUN
grj-139	34	26	(	(	PUNCT
grj-139	34	27	darrier	darrier	PROPN
grj-139	34	28	et	et	PROPN
grj-139	34	29	al	al	PROPN
grj-139	34	30	.	.	PROPN
grj-139	34	31	,	,	PUNCT
grj-139	34	32	2019	2019	NUM
grj-139	34	33	)	)	PUNCT
grj-139	34	34	.	.	PUNCT
grj-139	35	1	here	here	ADV
grj-139	35	2	,	,	PUNCT
grj-139	35	3	we	we	PRON
grj-139	35	4	report	report	VERB
grj-139	35	5	the	the	DET
grj-139	35	6	creation	creation	NOUN
grj-139	35	7	of	of	ADP
grj-139	35	8	a	a	DET
grj-139	35	9	dartag	dartag	NOUN
grj-139	35	10	panel	panel	NOUN
grj-139	35	11	of	of	ADP
grj-139	35	12	3,000	3,000	NUM
grj-139	35	13	loci	loci	NOUN
grj-139	35	14	distributed	distribute	VERB
grj-139	35	15	across	across	ADP
grj-139	35	16	the	the	DET
grj-139	35	17	alfalfa	alfalfa	NOUN
grj-139	35	18	genome	genome	NOUN
grj-139	35	19	for	for	ADP
grj-139	35	20	use	use	NOUN
grj-139	35	21	in	in	ADP
grj-139	35	22	molecular	molecular	ADJ
grj-139	35	23	breeding	breeding	NOUN
grj-139	35	24	and	and	CCONJ
grj-139	35	25	genomic	genomic	ADJ
grj-139	35	26	prediction	prediction	NOUN
grj-139	35	27	.	.	PUNCT
grj-139	36	1	dartag	dartag	NOUN
grj-139	36	2	is	be	AUX
grj-139	36	3	a	a	DET
grj-139	36	4	hybridization	hybridization	NOUN
grj-139	36	5	/	/	SYM
grj-139	36	6	amplicon	amplicon	NOUN
grj-139	36	7	-	-	PUNCT
grj-139	36	8	based	base	VERB
grj-139	36	9	targeted	target	VERB
grj-139	36	10	genotyping	genotyping	NOUN
grj-139	36	11	platform	platform	NOUN
grj-139	36	12	developed	develop	VERB
grj-139	36	13	by	by	ADP
grj-139	36	14	dart	dart	NOUN
grj-139	36	15	(	(	PUNCT
grj-139	36	16	blyton	blyton	PROPN
grj-139	36	17	et	et	PROPN
grj-139	36	18	al	al	PROPN
grj-139	36	19	.	.	PROPN
grj-139	37	1	(	(	PUNCT
grj-139	37	2	2023	2023	NUM
grj-139	37	3	)	)	PUNCT
grj-139	37	4	;	;	PUNCT
grj-139	37	5	https://www.diversityarrays.com/services/targeted-genotying/	https://www.diversityarrays.com/services/targeted-genotying/	X
grj-139	37	6	)	)	PUNCT
grj-139	37	7	.	.	PUNCT
grj-139	38	1	oligos	oligo	NOUN
grj-139	38	2	are	be	AUX
grj-139	38	3	custom	custom	NOUN
grj-139	38	4	designed	design	VERB
grj-139	38	5	to	to	PART
grj-139	38	6	target	target	VERB
grj-139	38	7	known	know	VERB
grj-139	38	8	genetic	genetic	ADJ
grj-139	38	9	variants	variant	NOUN
grj-139	38	10	(	(	PUNCT
grj-139	38	11	snps	snps	NOUN
grj-139	38	12	and	and	CCONJ
grj-139	38	13	indels	indel	VERB
grj-139	38	14	less	less	ADJ
grj-139	38	15	than	than	ADP
grj-139	38	16	50bp	50bp	NOUN
grj-139	38	17	)	)	PUNCT
grj-139	38	18	with	with	ADP
grj-139	38	19	its	its	PRON
grj-139	38	20	flanking	flank	VERB
grj-139	38	21	genomic	genomic	NOUN
grj-139	38	22	regions	region	NOUN
grj-139	38	23	,	,	PUNCT
grj-139	38	24	and	and	CCONJ
grj-139	38	25	sequencing	sequence	VERB
grj-139	38	26	products	product	NOUN
grj-139	38	27	of	of	ADP
grj-139	38	28	54bp	54bp	ADJ
grj-139	38	29	(	(	PUNCT
grj-139	38	30	legacy	legacy	NOUN
grj-139	38	31	technology	technology	NOUN
grj-139	38	32	)	)	PUNCT
grj-139	38	33	or	or	CCONJ
grj-139	38	34	81bp	81bp	NOUN
grj-139	38	35	(	(	PUNCT
grj-139	38	36	current	current	ADJ
grj-139	38	37	technology	technology	NOUN
grj-139	38	38	)	)	PUNCT
grj-139	38	39	in	in	ADP
grj-139	38	40	length	length	NOUN
grj-139	38	41	are	be	AUX
grj-139	38	42	produced	produce	VERB
grj-139	38	43	.	.	PUNCT
grj-139	39	1	the	the	DET
grj-139	39	2	dartag	dartag	NOUN
grj-139	39	3	assay	assay	VERB
grj-139	39	4	consists	consist	VERB
grj-139	39	5	of	of	ADP
grj-139	39	6	four	four	NUM
grj-139	39	7	steps	step	NOUN
grj-139	39	8	based	base	VERB
grj-139	39	9	on	on	ADP
grj-139	39	10	principles	principle	NOUN
grj-139	39	11	described	describe	VERB
grj-139	39	12	in	in	ADP
grj-139	39	13	(	(	PUNCT
grj-139	39	14	krishnakumar	krishnakumar	PROPN
grj-139	39	15	et	et	PROPN
grj-139	39	16	al	al	PROPN
grj-139	39	17	.	.	PROPN
grj-139	39	18	,	,	PUNCT
grj-139	39	19	2008	2008	NUM
grj-139	39	20	)	)	PUNCT
grj-139	39	21	.	.	PUNCT
grj-139	40	1	briefly	briefly	ADV
grj-139	40	2	,	,	PUNCT
grj-139	40	3	the	the	DET
grj-139	40	4	pool	pool	NOUN
grj-139	40	5	of	of	ADP
grj-139	40	6	3,000	3,000	NUM
grj-139	40	7	alfalfa	alfalfa	NOUN
grj-139	40	8	oligos	oligo	NOUN
grj-139	40	9	,	,	PUNCT
grj-139	40	10	each	each	PRON
grj-139	40	11	targeting	target	VERB
grj-139	40	12	one	one	NUM
grj-139	40	13	genetic	genetic	ADJ
grj-139	40	14	variant	variant	NOUN
grj-139	40	15	,	,	PUNCT
grj-139	40	16	is	be	AUX
grj-139	40	17	hybridized	hybridize	VERB
grj-139	40	18	to	to	PART
grj-139	40	19	denatured	denatured	VERB
grj-139	40	20	gdna	gdna	ADV
grj-139	40	21	in	in	ADP
grj-139	40	22	step	step	NOUN
grj-139	40	23	1	1	NUM
grj-139	40	24	,	,	PUNCT
grj-139	40	25	followed	follow	VERB
grj-139	40	26	by	by	ADP
grj-139	40	27	snp	snp	PROPN
grj-139	40	28	/	/	SYM
grj-139	40	29	indel	indel	NOUN
grj-139	40	30	copying	copying	NOUN
grj-139	40	31	into	into	ADP
grj-139	40	32	dartag	dartag	NOUN
grj-139	40	33	molecules	molecule	NOUN
grj-139	40	34	by	by	ADP
grj-139	40	35	dna	dna	NOUN
grj-139	40	36	polymerase	polymerase	NOUN
grj-139	40	37	in	in	ADP
grj-139	40	38	step	step	NOUN
grj-139	40	39	2	2	NUM
grj-139	40	40	.	.	PUNCT
grj-139	41	1	after	after	ADP
grj-139	41	2	ligation	ligation	NOUN
grj-139	41	3	into	into	ADP
grj-139	41	4	circular	circular	ADJ
grj-139	41	5	molecule	molecule	NOUN
grj-139	41	6	also	also	ADV
grj-139	41	7	in	in	ADP
grj-139	41	8	step	step	NOUN
grj-139	41	9	2	2	NUM
grj-139	41	10	,	,	PUNCT
grj-139	41	11	and	and	CCONJ
grj-139	41	12	nucleases	nuclease	NOUN
grj-139	41	13	treatment	treatment	NOUN
grj-139	41	14	to	to	PART
grj-139	41	15	remove	remove	VERB
grj-139	41	16	unwanted	unwanted	ADJ
grj-139	41	17	molecules	molecule	NOUN
grj-139	41	18	in	in	ADP
grj-139	41	19	step	step	NOUN
grj-139	41	20	3	3	NUM
grj-139	41	21	,	,	PUNCT
grj-139	41	22	dartag	dartag	NOUN
grj-139	41	23	products	product	NOUN
grj-139	41	24	are	be	AUX
grj-139	41	25	subsequently	subsequently	ADV
grj-139	41	26	amplified	amplify	VERB
grj-139	41	27	in	in	ADP
grj-139	41	28	step	step	NOUN
grj-139	41	29	4	4	NUM
grj-139	41	30	with	with	ADP
grj-139	41	31	simultaneous	simultaneous	ADJ
grj-139	41	32	addition	addition	NOUN
grj-139	41	33	of	of	ADP
grj-139	41	34	sample	sample	NOUN
grj-139	41	35	unique	unique	ADJ
grj-139	41	36	barcode	barcode	NOUN
grj-139	41	37	used	use	VERB
grj-139	41	38	downstream	downstream	NOUN
grj-139	41	39	for	for	ADP
grj-139	41	40	demultiplexing	demultiplexing	NOUN
grj-139	41	41	.	.	PUNCT
grj-139	42	1	the	the	DET
grj-139	42	2	products	product	NOUN
grj-139	42	3	of	of	ADP
grj-139	42	4	dartag	dartag	NOUN
grj-139	42	5	assay	assay	VERB
grj-139	42	6	,	,	PUNCT
grj-139	42	7	after	after	ADP
grj-139	42	8	purification	purification	NOUN
grj-139	42	9	and	and	CCONJ
grj-139	42	10	quantification	quantification	NOUN
grj-139	42	11	,	,	PUNCT
grj-139	42	12	are	be	AUX
grj-139	42	13	sequenced	sequence	VERB
grj-139	42	14	on	on	ADP
grj-139	42	15	ngs	ng	NOUN
grj-139	42	16	platforms	platform	NOUN
grj-139	42	17	(	(	PUNCT
grj-139	42	18	e.g.	e.g.	ADV
grj-139	42	19	novaseq	novaseq	VERB
grj-139	42	20	6000	6000	NUM
grj-139	42	21	,	,	PUNCT
grj-139	42	22	illumina	illumina	PROPN
grj-139	42	23	)	)	PUNCT
grj-139	42	24	to	to	ADP
grj-139	42	25	a	a	DET
grj-139	42	26	depth	depth	NOUN
grj-139	42	27	of	of	ADP
grj-139	42	28	around	around	ADV
grj-139	42	29	350x	350x	NOUN
grj-139	42	30	per	per	ADP
grj-139	42	31	marker	marker	NOUN
grj-139	42	32	per	per	ADP
grj-139	42	33	sample	sample	NOUN
grj-139	42	34	,	,	PUNCT
grj-139	42	35	then	then	ADV
grj-139	42	36	demultiplexed	demultiplexed	ADJ
grj-139	42	37	and	and	CCONJ
grj-139	42	38	genetic	genetic	ADJ
grj-139	42	39	variants	variant	NOUN
grj-139	42	40	detected	detect	VERB
grj-139	42	41	using	use	VERB
grj-139	42	42	dart	dart	NOUN
grj-139	42	43	’s	’s	PART
grj-139	42	44	proprietary	proprietary	ADJ
grj-139	42	45	analytical	analytical	ADJ
grj-139	42	46	pipeline	pipeline	NOUN
grj-139	42	47	.	.	PUNCT
grj-139	43	1	figure	figure	VERB
grj-139	43	2	1	1	NUM
grj-139	43	3	:	:	PUNCT
grj-139	43	4	dartag	dartag	VERB
grj-139	43	5	sequencing	sequencing	NOUN
grj-139	43	6	reads	read	NOUN
grj-139	43	7	from	from	ADP
grj-139	43	8	locus	locus	PROPN
grj-139	43	9	chr1.1_000194324	chr1.1_000194324	NOUN
grj-139	43	10	.	.	PUNCT
grj-139	44	1	each	each	DET
grj-139	44	2	sequence	sequence	NOUN
grj-139	44	3	is	be	AUX
grj-139	44	4	a	a	DET
grj-139	44	5	microhaplotype	microhaplotype	NOUN
grj-139	44	6	detected	detect	VERB
grj-139	44	7	in	in	ADP
grj-139	44	8	breeding	breeding	NOUN
grj-139	44	9	material	material	NOUN
grj-139	44	10	tested	test	VERB
grj-139	44	11	on	on	ADP
grj-139	44	12	the	the	DET
grj-139	44	13	panel	panel	NOUN
grj-139	44	14	.	.	PUNCT
grj-139	45	1	the	the	DET
grj-139	45	2	dartag	dartag	PROPN
grj-139	45	3	assay	assay	PROPN
grj-139	45	4	was	be	AUX
grj-139	45	5	designed	design	VERB
grj-139	45	6	to	to	PART
grj-139	45	7	detect	detect	VERB
grj-139	45	8	the	the	DET
grj-139	45	9	target	target	NOUN
grj-139	45	10	locus	locus	NOUN
grj-139	45	11	(	(	PUNCT
grj-139	45	12	black	black	ADJ
grj-139	45	13	rectangle	rectangle	NOUN
grj-139	45	14	)	)	PUNCT
grj-139	45	15	and	and	CCONJ
grj-139	45	16	distinguish	distinguish	VERB
grj-139	45	17	the	the	DET
grj-139	45	18	reference	reference	NOUN
grj-139	45	19	allele	allele	NOUN
grj-139	45	20	from	from	ADP
grj-139	45	21	the	the	DET
grj-139	45	22	alternative	alternative	ADJ
grj-139	45	23	allele	allele	NOUN
grj-139	45	24	.	.	PUNCT
grj-139	46	1	additional	additional	ADJ
grj-139	46	2	variant	variant	ADJ
grj-139	46	3	nucleotide	nucleotide	NOUN
grj-139	46	4	positions	position	NOUN
grj-139	46	5	(	(	PUNCT
grj-139	46	6	yellow	yellow	ADJ
grj-139	46	7	fill	fill	NOUN
grj-139	46	8	)	)	PUNCT
grj-139	46	9	distinguish	distinguish	VERB
grj-139	46	10	the	the	DET
grj-139	46	11	individual	individual	ADJ
grj-139	46	12	microhaplotypes	microhaplotype	NOUN
grj-139	46	13	.	.	PUNCT
grj-139	47	1	indels	indel	NOUN
grj-139	47	2	are	be	AUX
grj-139	47	3	shown	show	VERB
grj-139	47	4	in	in	ADP
grj-139	47	5	grey	grey	PROPN
grj-139	47	6	fill	fill	NOUN
grj-139	47	7	.	.	PUNCT
grj-139	48	1	physpos	physpos	NOUN
grj-139	48	2	refers	refer	VERB
grj-139	48	3	to	to	ADP
grj-139	48	4	the	the	DET
grj-139	48	5	physical	physical	ADJ
grj-139	48	6	nucleotide	nucleotide	NOUN
grj-139	48	7	position	position	NOUN
grj-139	48	8	within	within	ADP
grj-139	48	9	the	the	DET
grj-139	48	10	sequencing	sequencing	NOUN
grj-139	48	11	read	read	NOUN
grj-139	48	12	from	from	ADP
grj-139	48	13	left	left	ADJ
grj-139	48	14	to	to	ADP
grj-139	48	15	right	right	NOUN
grj-139	48	16	.	.	PUNCT
grj-139	49	1	the	the	DET
grj-139	49	2	alfalfa	alfalfa	PROPN
grj-139	49	3	dartag	dartag	PROPN
grj-139	49	4	panel	panel	NOUN
grj-139	49	5	was	be	AUX
grj-139	49	6	designed	design	VERB
grj-139	49	7	on	on	ADP
grj-139	49	8	the	the	DET
grj-139	49	9	legacy	legacy	NOUN
grj-139	49	10	technology	technology	NOUN
grj-139	49	11	to	to	PART
grj-139	49	12	produce	produce	VERB
grj-139	49	13	54bp	54bp	ADJ
grj-139	49	14	reads	read	NOUN
grj-139	49	15	but	but	CCONJ
grj-139	49	16	works	work	VERB
grj-139	49	17	equally	equally	ADV
grj-139	49	18	well	well	ADV
grj-139	49	19	with	with	ADP
grj-139	49	20	the	the	DET
grj-139	49	21	current	current	ADJ
grj-139	49	22	technology	technology	NOUN
grj-139	49	23	(	(	PUNCT
grj-139	49	24	81bp	81bp	NOUN
grj-139	49	25	reads	read	VERB
grj-139	49	26	)	)	PUNCT
grj-139	49	27	with	with	ADP
grj-139	49	28	the	the	DET
grj-139	49	29	caveat	caveat	NOUN
grj-139	49	30	that	that	SCONJ
grj-139	49	31	some	some	DET
grj-139	49	32	residual	residual	ADJ
grj-139	49	33	adapter	adapter	NOUN
grj-139	49	34	sequences	sequence	NOUN
grj-139	49	35	may	may	AUX
grj-139	49	36	be	be	AUX
grj-139	49	37	included	include	VERB
grj-139	49	38	(	(	PUNCT
grj-139	49	39	read	read	VERB
grj-139	49	40	-	-	PUNCT
grj-139	49	41	through	through	NOUN
grj-139	49	42	of	of	ADP
grj-139	49	43	the	the	DET
grj-139	49	44	entire	entire	ADJ
grj-139	49	45	fragment	fragment	NOUN
grj-139	49	46	into	into	ADP
grj-139	49	47	the	the	DET
grj-139	49	48	adapter	adapter	NOUN
grj-139	49	49	)	)	PUNCT
grj-139	49	50	.	.	PUNCT
grj-139	50	1	after	after	ADP
grj-139	50	2	trimming	trim	VERB
grj-139	50	3	of	of	ADP
grj-139	50	4	any	any	DET
grj-139	50	5	residual	residual	ADJ
grj-139	50	6	adapter	adapter	NOUN
grj-139	50	7	sequences	sequence	NOUN
grj-139	50	8	,	,	PUNCT
grj-139	50	9	the	the	DET
grj-139	50	10	reads	read	NOUN
grj-139	50	11	can	can	AUX
grj-139	50	12	be	be	AUX
grj-139	50	13	used	use	VERB
grj-139	50	14	to	to	PART
grj-139	50	15	call	call	VERB
grj-139	50	16	snps	snps	PROPN
grj-139	50	17	,	,	PUNCT
grj-139	50	18	or	or	CCONJ
grj-139	50	19	in	in	ADP
grj-139	50	20	the	the	DET
grj-139	50	21	case	case	NOUN
grj-139	50	22	of	of	ADP
grj-139	50	23	complex	complex	ADJ
grj-139	50	24	genomes	genome	NOUN
grj-139	50	25	like	like	ADP
grj-139	50	26	alfalfa	alfalfa	NOUN
grj-139	50	27	,	,	PUNCT
grj-139	50	28	used	use	VERB
grj-139	50	29	to	to	PART
grj-139	50	30	identify	identify	VERB
grj-139	50	31	microhaplotypes	microhaplotype	NOUN
grj-139	50	32	(	(	PUNCT
grj-139	50	33	figure	figure	NOUN
grj-139	50	34	1	1	NUM
grj-139	50	35	)	)	PUNCT
grj-139	50	36	.	.	PUNCT
grj-139	51	1	sequencing	sequence	VERB
grj-139	51	2	reads	read	NOUN
grj-139	51	3	can	can	AUX
grj-139	51	4	contain	contain	VERB
grj-139	51	5	variants	variant	NOUN
grj-139	51	6	beyond	beyond	ADP
grj-139	51	7	the	the	DET
grj-139	51	8	target	target	NOUN
grj-139	51	9	snp	snp	NOUN
grj-139	51	10	,	,	PUNCT
grj-139	51	11	which	which	PRON
grj-139	51	12	allows	allow	VERB
grj-139	51	13	for	for	ADP
grj-139	51	14	the	the	DET
grj-139	51	15	detection	detection	NOUN
grj-139	51	16	of	of	ADP
grj-139	51	17	more	more	ADJ
grj-139	51	18	than	than	ADP
grj-139	51	19	two	two	NUM
grj-139	51	20	alleles	allele	NOUN
grj-139	51	21	at	at	ADP
grj-139	51	22	each	each	PRON
grj-139	51	23	of	of	ADP
grj-139	51	24	the	the	DET
grj-139	51	25	3,000	3,000	NUM
grj-139	51	26	loci	locus	NOUN
grj-139	51	27	.	.	PUNCT
grj-139	52	1	as	as	SCONJ
grj-139	52	2	the	the	DET
grj-139	52	3	amplicons	amplicon	NOUN
grj-139	52	4	are	be	AUX
grj-139	52	5	very	very	ADV
grj-139	52	6	short	short	ADJ
grj-139	52	7	,	,	PUNCT
grj-139	52	8	variants	variant	NOUN
grj-139	52	9	found	find	VERB
grj-139	52	10	within	within	ADP
grj-139	52	11	these	these	DET
grj-139	52	12	reads	read	NOUN
grj-139	52	13	are	be	AUX
grj-139	52	14	assumed	assume	VERB
grj-139	52	15	to	to	PART
grj-139	52	16	be	be	AUX
grj-139	52	17	in	in	ADP
grj-139	52	18	complete	complete	ADJ
grj-139	52	19	linkage	linkage	NOUN
grj-139	52	20	disequilibrium	disequilibrium	NOUN
grj-139	52	21	and	and	CCONJ
grj-139	52	22	therefore	therefore	ADV
grj-139	52	23	can	can	AUX
grj-139	52	24	be	be	AUX
grj-139	52	25	used	use	VERB
grj-139	52	26	for	for	ADP
grj-139	52	27	phasing	phase	VERB
grj-139	52	28	genotyping	genotyping	NOUN
grj-139	52	29	calls	call	NOUN
grj-139	52	30	for	for	ADP
grj-139	52	31	genetic	genetic	ADJ
grj-139	52	32	map	map	NOUN
grj-139	52	33	construction	construction	NOUN
grj-139	52	34	.	.	PUNCT
grj-139	53	1	in	in	ADP
grj-139	53	2	addition	addition	NOUN
grj-139	53	3	,	,	PUNCT
grj-139	53	4	accurate	accurate	ADJ
grj-139	53	5	allele	allele	NOUN
grj-139	53	6	dosage	dosage	NOUN
grj-139	53	7	can	can	AUX
grj-139	53	8	be	be	AUX
grj-139	53	9	determined	determine	VERB
grj-139	53	10	for	for	ADP
grj-139	53	11	both	both	DET
grj-139	53	12	bi	bi	NOUN
grj-139	53	13	-	-	ADJ
grj-139	53	14	allelic	allelic	ADJ
grj-139	53	15	and	and	CCONJ
grj-139	53	16	multi	multi	ADJ
grj-139	53	17	-	-	ADJ
grj-139	53	18	allelic	allelic	ADJ
grj-139	53	19	haplotypes	haplotype	NOUN
grj-139	53	20	,	,	PUNCT
grj-139	53	21	allowing	allow	VERB
grj-139	53	22	genetic	genetic	ADJ
grj-139	53	23	effect	effect	NOUN
grj-139	53	24	contributions	contribution	NOUN
grj-139	53	25	to	to	PART
grj-139	53	26	be	be	AUX
grj-139	53	27	determined	determine	VERB
grj-139	53	28	for	for	ADP
grj-139	53	29	each	each	DET
grj-139	53	30	unique	unique	ADJ
grj-139	53	31	haplotype	haplotype	NOUN
grj-139	53	32	for	for	ADP
grj-139	53	33	traits	trait	NOUN
grj-139	53	34	of	of	ADP
grj-139	53	35	interest	interest	NOUN
grj-139	53	36	.	.	PUNCT
grj-139	54	1	as	as	SCONJ
grj-139	54	2	dart	dart	NOUN
grj-139	54	3	had	have	AUX
grj-139	54	4	not	not	PART
grj-139	54	5	tested	test	VERB
grj-139	54	6	many	many	ADJ
grj-139	54	7	polyploid	polyploid	ADJ
grj-139	54	8	species	specie	NOUN
grj-139	54	9	with	with	ADP
grj-139	54	10	dartag	dartag	NOUN
grj-139	54	11	when	when	SCONJ
grj-139	54	12	this	this	DET
grj-139	54	13	study	study	NOUN
grj-139	54	14	was	be	AUX
grj-139	54	15	initiated	initiate	VERB
grj-139	54	16	,	,	PUNCT
grj-139	54	17	we	we	PRON
grj-139	54	18	agreed	agree	VERB
grj-139	54	19	to	to	PART
grj-139	54	20	limit	limit	VERB
grj-139	54	21	the	the	DET
grj-139	54	22	number	number	NOUN
grj-139	54	23	of	of	ADP
grj-139	54	24	probes	probe	NOUN
grj-139	54	25	to	to	ADP
grj-139	54	26	3,000	3,000	NUM
grj-139	54	27	loci	locus	NOUN
grj-139	54	28	,	,	PUNCT
grj-139	54	29	though	though	SCONJ
grj-139	54	30	the	the	DET
grj-139	54	31	optimal	optimal	ADJ
grj-139	54	32	max	max	PROPN
grj-139	54	33	may	may	AUX
grj-139	54	34	differ	differ	VERB
grj-139	54	35	by	by	ADP
grj-139	54	36	species	specie	NOUN
grj-139	54	37	and	and	CCONJ
grj-139	54	38	genome	genome	NOUN
grj-139	54	39	complexity	complexity	NOUN
grj-139	54	40	,	,	PUNCT
grj-139	54	41	and	and	CCONJ
grj-139	54	42	read	read	VERB
grj-139	54	43	depth	depth	NOUN
grj-139	54	44	required	require	VERB
grj-139	54	45	to	to	AUX
grj-139	54	46	sufficiently	sufficiently	ADV
grj-139	54	47	call	call	VERB
grj-139	54	48	genotypes	genotype	NOUN
grj-139	54	49	(	(	PUNCT
grj-139	54	50	andrzej	andrzej	PROPN
grj-139	54	51	kilian	kilian	PROPN
grj-139	54	52	,	,	PUNCT
grj-139	54	53	dart	dart	PROPN
grj-139	54	54	,	,	PUNCT
grj-139	54	55	personal	personal	ADJ
grj-139	54	56	communication	communication	NOUN
grj-139	54	57	)	)	PUNCT
grj-139	54	58	.	.	PUNCT
grj-139	55	1	results	result	VERB
grj-139	55	2	this	this	DET
grj-139	55	3	alfalfa	alfalfa	NOUN
grj-139	55	4	3k	3k	X
grj-139	55	5	dartag	dartag	PROPN
grj-139	55	6	panel	panel	NOUN
grj-139	55	7	was	be	AUX
grj-139	55	8	developed	develop	VERB
grj-139	55	9	from	from	ADP
grj-139	55	10	a	a	DET
grj-139	55	11	diversity	diversity	NOUN
grj-139	55	12	panel	panel	NOUN
grj-139	55	13	of	of	ADP
grj-139	55	14	40	40	NUM
grj-139	55	15	individual	individual	ADJ
grj-139	55	16	alfalfa	alfalfa	NOUN
grj-139	55	17	clonal	clonal	ADJ
grj-139	55	18	genotypes	genotype	NOUN
grj-139	55	19	,	,	PUNCT
grj-139	55	20	focusing	focus	VERB
grj-139	55	21	on	on	ADP
grj-139	55	22	elite	elite	ADJ
grj-139	55	23	breeding	breeding	NOUN
grj-139	55	24	and	and	CCONJ
grj-139	55	25	stress	stress	NOUN
grj-139	55	26	-	-	PUNCT
grj-139	55	27	resistant	resistant	ADJ
grj-139	55	28	genotypes	genotype	NOUN
grj-139	55	29	used	use	VERB
grj-139	55	30	in	in	ADP
grj-139	55	31	north	north	PROPN
grj-139	55	32	america	america	PROPN
grj-139	55	33	.	.	PUNCT
grj-139	56	1	this	this	DET
grj-139	56	2	panel	panel	NOUN
grj-139	56	3	consisted	consist	VERB
grj-139	56	4	of	of	ADP
grj-139	56	5	17	17	NUM
grj-139	56	6	elite	elite	ADJ
grj-139	56	7	parents	parent	NOUN
grj-139	56	8	with	with	ADP
grj-139	56	9	various	various	ADJ
grj-139	56	10	fall	fall	NOUN
grj-139	56	11	dormancy	dormancy	NOUN
grj-139	56	12	levels	level	NOUN
grj-139	56	13	,	,	PUNCT
grj-139	56	14	six	six	NUM
grj-139	56	15	samples	sample	NOUN
grj-139	56	16	of	of	ADP
grj-139	56	17	diploid	diploid	ADJ
grj-139	56	18	-	-	ADJ
grj-139	56	19	cultivated	cultivate	VERB
grj-139	56	20	alfalfa	alfalfa	NOUN
grj-139	56	21	,	,	PUNCT
grj-139	56	22	13	13	NUM
grj-139	56	23	genotypes	genotype	NOUN
grj-139	56	24	with	with	ADP
grj-139	56	25	abiotic	abiotic	ADJ
grj-139	56	26	stress	stress	NOUN
grj-139	56	27	resistance	resistance	NOUN
grj-139	56	28	,	,	PUNCT
grj-139	56	29	one	one	NUM
grj-139	56	30	genotype	genotype	NOUN
grj-139	56	31	with	with	ADP
grj-139	56	32	aphanomyces	aphanomyce	NOUN
grj-139	56	33	root	root	NOUN
grj-139	56	34	rot	rot	VERB
grj-139	56	35	disease	disease	NOUN
grj-139	56	36	resistance	resistance	NOUN
grj-139	56	37	,	,	PUNCT
grj-139	56	38	and	and	CCONJ
grj-139	56	39	three	three	NUM
grj-139	56	40	other	other	ADJ
grj-139	56	41	genotypes	genotype	NOUN
grj-139	56	42	(	(	PUNCT
grj-139	56	43	table	table	NOUN
grj-139	56	44	1	1	NUM
grj-139	56	45	,	,	PUNCT
grj-139	56	46	column	column	NOUN
grj-139	56	47	2	2	NUM
grj-139	56	48	)	)	PUNCT
grj-139	56	49	.	.	PUNCT
grj-139	57	1	two	two	NUM
grj-139	57	2	biological	biological	ADJ
grj-139	57	3	replicates	replicate	NOUN
grj-139	57	4	of	of	ADP
grj-139	57	5	the	the	DET
grj-139	57	6	diversity	diversity	NOUN
grj-139	57	7	panel	panel	NOUN
grj-139	57	8	were	be	AUX
grj-139	57	9	processed	process	VERB
grj-139	57	10	,	,	PUNCT
grj-139	57	11	where	where	SCONJ
grj-139	57	12	the	the	DET
grj-139	57	13	sequencing	sequencing	NOUN
grj-139	57	14	libraries	library	NOUN
grj-139	57	15	were	be	AUX
grj-139	57	16	prepared	prepare	VERB
grj-139	57	17	using	use	VERB
grj-139	57	18	either	either	CCONJ
grj-139	57	19	illumina	illumina	PROPN
grj-139	57	20	nextera	nextera	PROPN
grj-139	57	21	wgs	wgs	PROPN
grj-139	57	22	library	library	PROPN
grj-139	57	23	prep	prep	NOUN
grj-139	57	24	at	at	ADP
grj-139	57	25	cornell	cornell	PROPN
grj-139	57	26	institute	institute	PROPN
grj-139	57	27	of	of	ADP
grj-139	57	28	biotechnology	biotechnology	NOUN
grj-139	57	29	or	or	CCONJ
grj-139	57	30	nebnext	nebnext	ADJ
grj-139	57	31	ultra	ultra	ADJ
grj-139	57	32	dna	dna	PROPN
grj-139	57	33	library	library	NOUN
grj-139	57	34	prep	prep	NOUN
grj-139	57	35	kit	kit	NOUN
grj-139	57	36	with	with	ADP
grj-139	57	37	an	an	DET
grj-139	57	38	average	average	ADJ
grj-139	57	39	insert	insert	NOUN
grj-139	57	40	dna	dna	NOUN
grj-139	57	41	size	size	NOUN
grj-139	57	42	of	of	ADP
grj-139	57	43	300bp	300bp	NOUN
grj-139	57	44	.	.	PUNCT
grj-139	58	1	the	the	DET
grj-139	58	2	whole	whole	ADJ
grj-139	58	3	-	-	PUNCT
grj-139	58	4	genome	genome	NOUN
grj-139	58	5	sequencing	sequencing	NOUN
grj-139	58	6	(	(	PUNCT
grj-139	58	7	wgs	wgs	NOUN
grj-139	58	8	)	)	PUNCT
grj-139	58	9	was	be	AUX
grj-139	58	10	done	do	VERB
grj-139	58	11	using	use	VERB
grj-139	58	12	illumina	illumina	PROPN
grj-139	58	13	novaseq	novaseq	PROPN
grj-139	58	14	6000	6000	NUM
grj-139	58	15	at	at	ADP
grj-139	58	16	novogene	novogene	NOUN
grj-139	58	17	(	(	PUNCT
grj-139	58	18	https://en.novogene.com/	https://en.novogene.com/	PROPN
grj-139	58	19	)	)	PUNCT
grj-139	58	20	.	.	PUNCT
grj-139	59	1	raw	raw	ADJ
grj-139	59	2	fastq	fastq	ADJ
grj-139	59	3	sequences	sequence	NOUN
grj-139	59	4	were	be	AUX
grj-139	59	5	processed	process	VERB
grj-139	59	6	by	by	ADP
grj-139	59	7	removing	remove	VERB
grj-139	59	8	residual	residual	ADJ
grj-139	59	9	adapter	adapter	NOUN
grj-139	59	10	sequences	sequence	NOUN
grj-139	59	11	and	and	CCONJ
grj-139	59	12	low	low	ADJ
grj-139	59	13	-	-	PUNCT
grj-139	59	14	quality	quality	NOUN
grj-139	59	15	bases	basis	NOUN
grj-139	59	16	using	use	VERB
grj-139	59	17	trimmomatic	trimmomatic	PROPN
grj-139	59	18	(	(	PUNCT
grj-139	59	19	leading:10	leading:10	X
grj-139	59	20	trailing:10	trailing:10	X
grj-139	59	21	slidingwindow:4:15	slidingwindow:4:15	NUM
grj-139	59	22	minlen:30	minlen:30	NOUN
grj-139	59	23	)	)	PUNCT
grj-139	59	24	(	(	PUNCT
grj-139	59	25	bolger	bolger	NOUN
grj-139	59	26	,	,	PUNCT
grj-139	59	27	lohse	lohse	PROPN
grj-139	59	28	,	,	PUNCT
grj-139	59	29	&	&	CCONJ
grj-139	59	30	usadel	usadel	NOUN
grj-139	59	31	,	,	PUNCT
grj-139	59	32	2014	2014	NUM
grj-139	59	33	)	)	PUNCT
grj-139	59	34	.	.	PUNCT
grj-139	60	1	cleaned	clean	VERB
grj-139	60	2	reads	read	NOUN
grj-139	60	3	were	be	AUX
grj-139	60	4	then	then	ADV
grj-139	60	5	aligned	align	VERB
grj-139	60	6	to	to	ADP
grj-139	60	7	the	the	DET
grj-139	60	8	haploid	haploid	NOUN
grj-139	60	9	set	set	NOUN
grj-139	60	10	(	(	PUNCT
grj-139	60	11	the	the	DET
grj-139	60	12	first	first	ADJ
grj-139	60	13	set	set	VERB
grj-139	60	14	out	out	ADP
grj-139	60	15	of	of	ADP
grj-139	60	16	the	the	DET
grj-139	60	17	four	four	NUM
grj-139	60	18	homologous	homologous	ADJ
grj-139	60	19	chromosomes	chromosome	NOUN
grj-139	60	20	)	)	PUNCT
grj-139	60	21	of	of	ADP
grj-139	60	22	xinjiangdaye	xinjiangdaye	NOUN
grj-139	60	23	reference	reference	NOUN
grj-139	60	24	genome	genome	NOUN
grj-139	60	25	(	(	PUNCT
grj-139	60	26	chen	chen	PROPN
grj-139	60	27	et	et	PROPN
grj-139	60	28	al	al	PROPN
grj-139	60	29	.	.	PROPN
grj-139	60	30	,	,	PUNCT
grj-139	60	31	2020	2020	NUM
grj-139	60	32	)	)	PUNCT
grj-139	60	33	using	use	VERB
grj-139	60	34	bwa	bwa	NOUN
grj-139	60	35	-	-	PUNCT
grj-139	60	36	mem	mem	X
grj-139	60	37	(	(	PUNCT
grj-139	60	38	li	li	PROPN
grj-139	60	39	,	,	PUNCT
grj-139	60	40	2012	2012	NUM
grj-139	60	41	;	;	PUNCT
grj-139	60	42	li	li	PROPN
grj-139	60	43	,	,	PUNCT
grj-139	60	44	2013	2013	NUM
grj-139	60	45	)	)	PUNCT
grj-139	60	46	and	and	CCONJ
grj-139	60	47	structural	structural	ADJ
grj-139	60	48	variants	variant	NOUN
grj-139	60	49	(	(	PUNCT
grj-139	60	50	snps	snps	NOUN
grj-139	60	51	and	and	CCONJ
grj-139	60	52	indels	indel	NOUN
grj-139	60	53	)	)	PUNCT
grj-139	60	54	were	be	AUX
grj-139	60	55	called	call	VERB
grj-139	60	56	using	use	VERB
grj-139	60	57	the	the	DET
grj-139	60	58	dnaseq	dnaseq	NOUN
grj-139	60	59	pipeline	pipeline	NOUN
grj-139	60	60	developed	develop	VERB
grj-139	60	61	by	by	ADP
grj-139	60	62	sention	sention	NOUN
grj-139	60	63	(	(	PUNCT
grj-139	60	64	https://www.sentieon.com	https://www.sentieon.com	X
grj-139	60	65	)	)	PUNCT
grj-139	60	66	.	.	PUNCT
grj-139	61	1	a	a	DET
grj-139	61	2	total	total	NOUN
grj-139	61	3	of	of	ADP
grj-139	61	4	28	28	NUM
grj-139	61	5	m	m	NOUN
grj-139	61	6	snps	snps	NOUN
grj-139	61	7	present	present	ADJ
grj-139	61	8	in	in	ADP
grj-139	61	9	both	both	DET
grj-139	61	10	replicates	replicate	NOUN
grj-139	61	11	were	be	AUX
grj-139	61	12	discovered	discover	VERB
grj-139	61	13	from	from	ADP
grj-139	61	14	the	the	DET
grj-139	61	15	whole	whole	ADJ
grj-139	61	16	-	-	PUNCT
grj-139	61	17	genome	genome	NOUN
grj-139	61	18	re	re	NOUN
grj-139	61	19	-	-	VERB
grj-139	61	20	sequencing	sequence	VERB
grj-139	61	21	of	of	ADP
grj-139	61	22	the	the	DET
grj-139	61	23	diversity	diversity	NOUN
grj-139	61	24	panel	panel	NOUN
grj-139	61	25	,	,	PUNCT
grj-139	61	26	where	where	SCONJ
grj-139	61	27	a	a	DET
grj-139	61	28	high	high	ADJ
grj-139	61	29	-	-	PUNCT
grj-139	61	30	confidence	confidence	NOUN
grj-139	61	31	set	set	NOUN
grj-139	61	32	of	of	ADP
grj-139	61	33	10k	10k	PROPN
grj-139	61	34	snps	snps	PROPN
grj-139	61	35	(	(	PUNCT
grj-139	61	36	figure	figure	NOUN
grj-139	61	37	2	2	NUM
grj-139	61	38	)	)	PUNCT
grj-139	61	39	were	be	AUX
grj-139	61	40	obtained	obtain	VERB
grj-139	61	41	by	by	ADP
grj-139	61	42	requiring	require	VERB
grj-139	61	43	them	they	PRON
grj-139	61	44	:	:	PUNCT
grj-139	61	45	(	(	PUNCT
grj-139	61	46	1	1	X
grj-139	61	47	)	)	PUNCT
grj-139	61	48	not	not	PART
grj-139	61	49	located	locate	VERB
grj-139	61	50	within	within	ADP
grj-139	61	51	5bp	5bp	ADJ
grj-139	61	52	distance	distance	NOUN
grj-139	61	53	to	to	ADP
grj-139	61	54	an	an	DET
grj-139	61	55	indel	indel	NOUN
grj-139	61	56	,	,	PUNCT
grj-139	61	57	(	(	PUNCT
grj-139	61	58	2	2	X
grj-139	61	59	)	)	PUNCT
grj-139	61	60	qual	qual	X
grj-139	61	61	>	>	X
grj-139	61	62	30	30	NUM
grj-139	61	63	,	,	PUNCT
grj-139	61	64	(	(	PUNCT
grj-139	61	65	3	3	X
grj-139	61	66	)	)	PUNCT
grj-139	61	67	minimum	minimum	NOUN
grj-139	61	68	and	and	CCONJ
grj-139	61	69	maximum	maximum	ADJ
grj-139	61	70	read	read	ADJ
grj-139	61	71	depths	depth	NOUN
grj-139	61	72	of	of	ADP
grj-139	61	73	20	20	NUM
grj-139	61	74	and	and	CCONJ
grj-139	61	75	1,900	1,900	NUM
grj-139	61	76	,	,	PUNCT
grj-139	61	77	respectively	respectively	ADV
grj-139	61	78	,	,	PUNCT
grj-139	61	79	(	(	PUNCT
grj-139	61	80	4	4	NUM
grj-139	61	81	)	)	PUNCT
grj-139	61	82	for	for	ADP
grj-139	61	83	each	each	DET
grj-139	61	84	sample	sample	NOUN
grj-139	61	85	,	,	PUNCT
grj-139	61	86	at	at	ADP
grj-139	61	87	least	least	ADV
grj-139	61	88	one	one	NUM
grj-139	61	89	read	read	NOUN
grj-139	61	90	supporting	support	VERB
grj-139	61	91	reference	reference	NOUN
grj-139	61	92	allele	allele	NOUN
grj-139	61	93	and	and	CCONJ
grj-139	61	94	two	two	NUM
grj-139	61	95	reads	read	NOUN
grj-139	61	96	supporting	support	VERB
grj-139	61	97	the	the	DET
grj-139	61	98	alternative	alternative	ADJ
grj-139	61	99	allele	allele	NOUN
grj-139	61	100	,	,	PUNCT
grj-139	61	101	(	(	PUNCT
grj-139	61	102	5	5	X
grj-139	61	103	)	)	PUNCT
grj-139	61	104	no	no	DET
grj-139	61	105	missing	miss	VERB
grj-139	61	106	genotype	genotype	NOUN
grj-139	61	107	per	per	ADP
grj-139	61	108	snp	snp	ADJ
grj-139	61	109	position	position	NOUN
grj-139	61	110	,	,	PUNCT
grj-139	61	111	(	(	PUNCT
grj-139	61	112	6	6	NUM
grj-139	61	113	)	)	PUNCT
grj-139	61	114	with	with	ADP
grj-139	61	115	a	a	DET
grj-139	61	116	minor	minor	ADJ
grj-139	61	117	allele	allele	NOUN
grj-139	61	118	frequency	frequency	NOUN
grj-139	61	119	greater	great	ADJ
grj-139	61	120	than	than	ADP
grj-139	61	121	0.25	0.25	NUM
grj-139	61	122	,	,	PUNCT
grj-139	61	123	(	(	PUNCT
grj-139	61	124	7	7	X
grj-139	61	125	)	)	PUNCT
grj-139	61	126	not	not	PART
grj-139	61	127	located	locate	VERB
grj-139	61	128	in	in	ADP
grj-139	61	129	transposable	transposable	ADJ
grj-139	61	130	elements	element	NOUN
grj-139	61	131	and	and	CCONJ
grj-139	61	132	(	(	PUNCT
grj-139	61	133	8)	8)	NUM
grj-139	61	134	not	not	PART
grj-139	61	135	within	within	ADP
grj-139	61	136	1	1	NUM
grj-139	61	137	kb	kb	NOUN
grj-139	61	138	of	of	ADP
grj-139	61	139	chromosome	chromosome	NOUN
grj-139	61	140	termini	termini	NOUN
grj-139	61	141	.	.	PUNCT
grj-139	62	1	the	the	DET
grj-139	62	2	10k	10k	PROPN
grj-139	62	3	snps	snps	PROPN
grj-139	62	4	were	be	AUX
grj-139	62	5	assessed	assess	VERB
grj-139	62	6	by	by	ADP
grj-139	62	7	dart	dart	NOUN
grj-139	62	8	,	,	PUNCT
grj-139	62	9	and	and	CCONJ
grj-139	62	10	from	from	ADP
grj-139	62	11	those	those	PRON
grj-139	62	12	that	that	PRON
grj-139	62	13	passed	pass	VERB
grj-139	62	14	qc	qc	PROPN
grj-139	62	15	,	,	PUNCT
grj-139	62	16	a	a	DET
grj-139	62	17	3k	3k	NUM
grj-139	62	18	snp	snp	NOUN
grj-139	62	19	set	set	VERB
grj-139	62	20	targeting	target	VERB
grj-139	62	21	even	even	ADV
grj-139	62	22	genomic	genomic	ADJ
grj-139	62	23	distribution	distribution	NOUN
grj-139	62	24	was	be	AUX
grj-139	62	25	selected	select	VERB
grj-139	62	26	to	to	PART
grj-139	62	27	form	form	VERB
grj-139	62	28	a	a	DET
grj-139	62	29	3k	3k	NUM
grj-139	62	30	dartag	dartag	NOUN
grj-139	62	31	marker	marker	NOUN
grj-139	62	32	panel	panel	NOUN
grj-139	62	33	.	.	PUNCT
grj-139	63	1	of	of	ADP
grj-139	63	2	the	the	DET
grj-139	63	3	3,000	3,000	NUM
grj-139	63	4	loci	loci	NOUN
grj-139	63	5	selected	select	VERB
grj-139	63	6	for	for	ADP
grj-139	63	7	the	the	DET
grj-139	63	8	panel	panel	NOUN
grj-139	63	9	,	,	PUNCT
grj-139	63	10	85	85	NUM
grj-139	63	11	%	%	NOUN
grj-139	63	12	(	(	PUNCT
grj-139	63	13	2,542	2,542	NUM
grj-139	63	14	)	)	PUNCT
grj-139	63	15	reside	reside	VERB
grj-139	63	16	in	in	ADP
grj-139	63	17	genic	genic	ADJ
grj-139	63	18	regions	region	NOUN
grj-139	63	19	and	and	CCONJ
grj-139	63	20	only	only	ADV
grj-139	63	21	15	15	NUM
grj-139	63	22	%	%	NOUN
grj-139	63	23	(	(	PUNCT
grj-139	63	24	458	458	NUM
grj-139	63	25	)	)	PUNCT
grj-139	63	26	reside	reside	VERB
grj-139	63	27	in	in	ADP
grj-139	63	28	non	non	ADJ
grj-139	63	29	-	-	ADJ
grj-139	63	30	genic	genic	ADJ
grj-139	63	31	regions	region	NOUN
grj-139	63	32	(	(	PUNCT
grj-139	63	33	supplemental	supplemental	ADJ
grj-139	63	34	table	table	NOUN
grj-139	63	35	1	1	NUM
grj-139	63	36	)	)	PUNCT
grj-139	63	37	.	.	PUNCT
grj-139	64	1	oligo	oligo	ADJ
grj-139	64	2	probes	probe	NOUN
grj-139	64	3	were	be	AUX
grj-139	64	4	synthesized	synthesize	VERB
grj-139	64	5	,	,	PUNCT
grj-139	64	6	and	and	CCONJ
grj-139	64	7	genotyping	genotyping	NOUN
grj-139	64	8	done	do	VERB
grj-139	64	9	at	at	ADP
grj-139	64	10	dart	dart	NOUN
grj-139	64	11	.	.	PUNCT
grj-139	65	1	the	the	DET
grj-139	65	2	alfalfa	alfalfa	NOUN
grj-139	65	3	3k	3k	X
grj-139	65	4	dartag	dartag	PROPN
grj-139	65	5	marker	marker	NOUN
grj-139	65	6	panel	panel	NOUN
grj-139	65	7	was	be	AUX
grj-139	65	8	validated	validate	VERB
grj-139	65	9	using	use	VERB
grj-139	65	10	a	a	DET
grj-139	65	11	bi	bi	ADJ
grj-139	65	12	-	-	ADJ
grj-139	65	13	parental	parental	ADJ
grj-139	65	14	f1	f1	NOUN
grj-139	65	15	population	population	NOUN
grj-139	65	16	(	(	PUNCT
grj-139	65	17	n	n	NOUN
grj-139	65	18	=	=	SYM
grj-139	65	19	184	184	NUM
grj-139	65	20	)	)	PUNCT
grj-139	65	21	,	,	PUNCT
grj-139	65	22	a	a	DET
grj-139	65	23	backcross	backcross	NOUN
grj-139	65	24	(	(	PUNCT
grj-139	65	25	bc1	bc1	NOUN
grj-139	65	26	)	)	PUNCT
grj-139	65	27	population	population	NOUN
grj-139	65	28	(	(	PUNCT
grj-139	65	29	n	n	NOUN
grj-139	65	30	=	=	SYM
grj-139	65	31	94	94	NUM
grj-139	65	32	)	)	PUNCT
grj-139	65	33	,	,	PUNCT
grj-139	65	34	and	and	CCONJ
grj-139	65	35	a	a	DET
grj-139	65	36	diverse	diverse	ADJ
grj-139	65	37	set	set	NOUN
grj-139	65	38	of	of	ADP
grj-139	65	39	elite	elite	ADJ
grj-139	65	40	genotypes	genotype	NOUN
grj-139	65	41	(	(	PUNCT
grj-139	65	42	n	n	NOUN
grj-139	65	43	=	=	SYM
grj-139	65	44	74	74	NUM
grj-139	65	45	)	)	PUNCT
grj-139	65	46	and	and	CCONJ
grj-139	65	47	individual	individual	ADJ
grj-139	65	48	plants	plant	NOUN
grj-139	65	49	from	from	ADP
grj-139	65	50	other	other	ADJ
grj-139	65	51	medicago	medicago	PROPN
grj-139	65	52	species	specie	NOUN
grj-139	65	53	(	(	PUNCT
grj-139	65	54	n	n	NOUN
grj-139	65	55	=	=	SYM
grj-139	65	56	20	20	NUM
grj-139	65	57	)	)	PUNCT
grj-139	65	58	(	(	PUNCT
grj-139	65	59	table	table	NOUN
grj-139	65	60	1	1	NUM
grj-139	65	61	,	,	PUNCT
grj-139	65	62	column	column	NOUN
grj-139	65	63	3	3	NUM
grj-139	65	64	)	)	PUNCT
grj-139	65	65	.	.	PUNCT
grj-139	66	1	it	it	PRON
grj-139	66	2	should	should	AUX
grj-139	66	3	be	be	AUX
grj-139	66	4	noted	note	VERB
grj-139	66	5	that	that	SCONJ
grj-139	66	6	all	all	DET
grj-139	66	7	40	40	NUM
grj-139	66	8	alfalfa	alfalfa	NOUN
grj-139	66	9	lines	line	NOUN
grj-139	66	10	used	use	VERB
grj-139	66	11	in	in	ADP
grj-139	66	12	the	the	DET
grj-139	66	13	snp	snp	ADJ
grj-139	66	14	discovery	discovery	PROPN
grj-139	66	15	were	be	AUX
grj-139	66	16	also	also	ADV
grj-139	66	17	included	include	VERB
grj-139	66	18	in	in	ADP
grj-139	66	19	this	this	DET
grj-139	66	20	validation	validation	NOUN
grj-139	66	21	sample	sample	NOUN
grj-139	66	22	set	set	NOUN
grj-139	66	23	.	.	PUNCT
grj-139	67	1	the	the	DET
grj-139	67	2	material	material	NOUN
grj-139	67	3	selected	select	VERB
grj-139	67	4	for	for	ADP
grj-139	67	5	validation	validation	NOUN
grj-139	67	6	was	be	AUX
grj-139	67	7	to	to	PART
grj-139	67	8	assess	assess	VERB
grj-139	67	9	(	(	PUNCT
grj-139	67	10	1	1	X
grj-139	67	11	)	)	PUNCT
grj-139	67	12	the	the	DET
grj-139	67	13	panel	panel	NOUN
grj-139	67	14	’s	’s	PART
grj-139	67	15	ability	ability	NOUN
grj-139	67	16	to	to	PART
grj-139	67	17	construct	construct	VERB
grj-139	67	18	genetic	genetic	ADJ
grj-139	67	19	(	(	PUNCT
grj-139	67	20	linkage	linkage	NOUN
grj-139	67	21	)	)	PUNCT
grj-139	67	22	maps	map	NOUN
grj-139	67	23	with	with	ADP
grj-139	67	24	the	the	DET
grj-139	67	25	data	data	NOUN
grj-139	67	26	output	output	NOUN
grj-139	67	27	and	and	CCONJ
grj-139	67	28	(	(	PUNCT
grj-139	67	29	2	2	NUM
grj-139	67	30	)	)	PUNCT
grj-139	67	31	to	to	PART
grj-139	67	32	define	define	VERB
grj-139	67	33	the	the	DET
grj-139	67	34	usable	usable	ADJ
grj-139	67	35	limit	limit	NOUN
grj-139	67	36	to	to	ADP
grj-139	67	37	the	the	DET
grj-139	67	38	panel	panel	NOUN
grj-139	67	39	with	with	ADP
grj-139	67	40	extant	extant	ADJ
grj-139	67	41	species	specie	NOUN
grj-139	67	42	(	(	PUNCT
grj-139	67	43	non	non	ADJ
grj-139	67	44	-	-	ADJ
grj-139	67	45	medicago	medicago	ADJ
grj-139	67	46	sativa	sativa	NOUN
grj-139	67	47	)	)	PUNCT
grj-139	67	48	germplasm	germplasm	NOUN
grj-139	67	49	.	.	PUNCT
grj-139	68	1	as	as	SCONJ
grj-139	68	2	expected	expect	VERB
grj-139	68	3	,	,	PUNCT
grj-139	68	4	the	the	DET
grj-139	68	5	missing	miss	VERB
grj-139	68	6	data	datum	NOUN
grj-139	68	7	(	(	PUNCT
grj-139	68	8	a	a	DET
grj-139	68	9	marker	marker	NOUN
grj-139	68	10	with	with	ADP
grj-139	68	11	<	<	X
grj-139	68	12	10	10	NUM
grj-139	68	13	reads	read	NOUN
grj-139	68	14	in	in	ADP
grj-139	68	15	a	a	DET
grj-139	68	16	population	population	NOUN
grj-139	68	17	)	)	PUNCT
grj-139	68	18	is	be	AUX
grj-139	68	19	the	the	DET
grj-139	68	20	lowest	low	ADJ
grj-139	68	21	among	among	ADP
grj-139	68	22	the	the	DET
grj-139	68	23	medicago	medicago	PROPN
grj-139	68	24	sativa	sativa	NOUN
grj-139	68	25	genotypes	genotype	NOUN
grj-139	68	26	.	.	PUNCT
grj-139	69	1	the	the	DET
grj-139	69	2	alfalfa	alfalfa	NOUN
grj-139	69	3	lines	line	NOUN
grj-139	69	4	used	use	VERB
grj-139	69	5	in	in	ADP
grj-139	69	6	snp	snp	ADJ
grj-139	69	7	discovery	discovery	PROPN
grj-139	69	8	showed	show	VERB
grj-139	69	9	the	the	DET
grj-139	69	10	least	least	ADV
grj-139	69	11	missing	missing	ADJ
grj-139	69	12	data	datum	NOUN
grj-139	69	13	(	(	PUNCT
grj-139	69	14	an	an	DET
grj-139	69	15	average	average	NOUN
grj-139	69	16	of	of	ADP
grj-139	69	17	~9	~9	NUM
grj-139	69	18	%	%	NOUN
grj-139	69	19	of	of	ADP
grj-139	69	20	the	the	DET
grj-139	69	21	3k	3k	PROPN
grj-139	69	22	markers	marker	NOUN
grj-139	69	23	with	with	ADP
grj-139	69	24	no	no	DET
grj-139	69	25	data	datum	NOUN
grj-139	69	26	)	)	PUNCT
grj-139	69	27	and	and	CCONJ
grj-139	69	28	the	the	DET
grj-139	69	29	rest	rest	NOUN
grj-139	69	30	m.	m.	NOUN
grj-139	69	31	sativa	sativa	NOUN
grj-139	69	32	lines	line	NOUN
grj-139	69	33	of	of	ADP
grj-139	69	34	the	the	DET
grj-139	69	35	validation	validation	NOUN
grj-139	69	36	sample	sample	NOUN
grj-139	69	37	set	set	NOUN
grj-139	69	38	had	have	AUX
grj-139	69	39	comparable	comparable	ADJ
grj-139	69	40	missing	missing	ADJ
grj-139	69	41	rates	rate	NOUN
grj-139	69	42	(	(	PUNCT
grj-139	69	43	10	10	NUM
grj-139	69	44	%	%	NOUN
grj-139	69	45	)	)	PUNCT
grj-139	69	46	(	(	PUNCT
grj-139	69	47	supplemental	supplemental	ADJ
grj-139	69	48	figure	figure	NOUN
grj-139	69	49	2	2	NUM
grj-139	69	50	)	)	PUNCT
grj-139	69	51	.	.	PUNCT
grj-139	70	1	other	other	ADJ
grj-139	70	2	medicago	medicago	PROPN
grj-139	70	3	species	specie	NOUN
grj-139	70	4	had	have	VERB
grj-139	70	5	an	an	DET
grj-139	70	6	average	average	NOUN
grj-139	70	7	of	of	ADP
grj-139	70	8	51	51	NUM
grj-139	70	9	%	%	NOUN
grj-139	70	10	markers	marker	NOUN
grj-139	70	11	with	with	ADP
grj-139	70	12	missing	miss	VERB
grj-139	70	13	data	datum	NOUN
grj-139	70	14	,	,	PUNCT
grj-139	70	15	which	which	PRON
grj-139	70	16	is	be	AUX
grj-139	70	17	approximately	approximately	ADV
grj-139	70	18	five	five	NUM
grj-139	70	19	times	time	NOUN
grj-139	70	20	higher	high	ADJ
grj-139	70	21	than	than	ADP
grj-139	70	22	the	the	DET
grj-139	70	23	m.	m.	NOUN
grj-139	70	24	sativa	sativa	NOUN
grj-139	70	25	genotypes	genotype	NOUN
grj-139	70	26	.	.	PUNCT
grj-139	71	1	table	table	NOUN
grj-139	71	2	1	1	NUM
grj-139	71	3	:	:	PUNCT
grj-139	71	4	accessions	accession	NOUN
grj-139	71	5	used	use	VERB
grj-139	71	6	in	in	ADP
grj-139	71	7	the	the	DET
grj-139	71	8	construction	construction	NOUN
grj-139	71	9	and	and	CCONJ
grj-139	71	10	testing	testing	NOUN
grj-139	71	11	of	of	ADP
grj-139	71	12	the	the	DET
grj-139	71	13	alfalfa	alfalfa	NOUN
grj-139	71	14	(	(	PUNCT
grj-139	71	15	medicago	medicago	PROPN
grj-139	71	16	sativa	sativa	PROPN
grj-139	71	17	l.	l.	PROPN
grj-139	71	18	)	)	PUNCT
grj-139	71	19	3k	3k	PROPN
grj-139	71	20	dartag	dartag	PROPN
grj-139	71	21	panel	panel	PROPN
grj-139	71	22	.	.	PUNCT
grj-139	72	1	germplasm	germplasm	NOUN
grj-139	72	2	used	use	VERB
grj-139	72	3	for	for	ADP
grj-139	72	4	whole	whole	ADJ
grj-139	72	5	genome	genome	NOUN
grj-139	72	6	sequencing	sequencing	NOUN
grj-139	72	7	and	and	CCONJ
grj-139	72	8	snp	snp	ADJ
grj-139	72	9	database	database	NOUN
grj-139	72	10	construction	construction	NOUN
grj-139	72	11	are	be	AUX
grj-139	72	12	indicated	indicate	VERB
grj-139	72	13	by	by	ADP
grj-139	72	14	‘	'	PUNCT
grj-139	72	15	y	y	NOUN
grj-139	72	16	’	'	PUNCT
grj-139	72	17	in	in	ADP
grj-139	72	18	the	the	DET
grj-139	72	19	‘	'	PUNCT
grj-139	72	20	snp	snp	ADJ
grj-139	72	21	discovery	discovery	NOUN
grj-139	72	22	’	'	PUNCT
grj-139	72	23	column	column	NOUN
grj-139	72	24	.	.	PUNCT
grj-139	73	1	germplasm	germplasm	NOUN
grj-139	73	2	used	use	VERB
grj-139	73	3	to	to	PART
grj-139	73	4	validate	validate	VERB
grj-139	73	5	the	the	DET
grj-139	73	6	3k	3k	NUM
grj-139	73	7	panel	panel	NOUN
grj-139	73	8	is	be	AUX
grj-139	73	9	indicated	indicate	VERB
grj-139	73	10	by	by	ADP
grj-139	73	11	‘	'	PUNCT
grj-139	73	12	y	y	NOUN
grj-139	73	13	’	'	PUNCT
grj-139	73	14	in	in	ADP
grj-139	73	15	the	the	DET
grj-139	73	16	‘	'	PUNCT
grj-139	73	17	validation	validation	NOUN
grj-139	73	18	set	set	NOUN
grj-139	73	19	’	'	PUNCT
grj-139	73	20	column	column	NOUN
grj-139	73	21	.	.	PUNCT
grj-139	74	1	sample	sample	NOUN
grj-139	74	2	i	i	PROPN
grj-139	74	3	d	d	PROPN
grj-139	74	4	snp	snp	PROPN
grj-139	74	5	discovery	discovery	PROPN
grj-139	74	6	validation	validation	NOUN
grj-139	74	7	set	set	VERB
grj-139	74	8	contributor	contributor	NOUN
grj-139	74	9	note	note	NOUN
grj-139	74	10	s&w	s&w	PROPN
grj-139	75	1	fd4	fd4	ADV
grj-139	75	2	y	y	PROPN
grj-139	75	3	y	y	PROPN
grj-139	75	4	s&w	s&w	PROPN
grj-139	75	5	seed	seed	PROPN
grj-139	75	6	co.	co.	PROPN
grj-139	75	7	elite	elite	ADJ
grj-139	75	8	parent	parent	NOUN
grj-139	75	9	;	;	PUNCT
grj-139	76	1	fall	fall	VERB
grj-139	76	2	dormancy	dormancy	NOUN
grj-139	76	3	4	4	NUM
grj-139	76	4	s&w	s&w	ADV
grj-139	76	5	fd5	fd5	ADJ
grj-139	76	6	y	y	PROPN
grj-139	76	7	y	y	PROPN
grj-139	76	8	s&w	s&w	PROPN
grj-139	76	9	seed	seed	PROPN
grj-139	76	10	co.	co.	PROPN
grj-139	76	11	elite	elite	ADJ
grj-139	76	12	parent	parent	NOUN
grj-139	76	13	;	;	PUNCT
grj-139	76	14	fall	fall	VERB
grj-139	76	15	dormancy	dormancy	NOUN
grj-139	76	16	5	5	NUM
grj-139	76	17	legacy	legacy	NOUN
grj-139	76	18	fd4	fd4	NOUN
grj-139	76	19	y	y	PROPN
grj-139	76	20	y	y	PROPN
grj-139	76	21	legacy	legacy	NOUN
grj-139	76	22	seeds	seed	NOUN
grj-139	76	23	elite	elite	ADJ
grj-139	76	24	parent	parent	NOUN
grj-139	76	25	;	;	PUNCT
grj-139	76	26	fall	fall	VERB
grj-139	76	27	dormancy	dormancy	NOUN
grj-139	76	28	4	4	NUM
grj-139	76	29	legacy	legacy	NOUN
grj-139	76	30	fd5	fd5	VERB
grj-139	76	31	y	y	PROPN
grj-139	76	32	y	y	PROPN
grj-139	76	33	legacy	legacy	NOUN
grj-139	76	34	seeds	seed	NOUN
grj-139	76	35	elite	elite	ADJ
grj-139	76	36	parent	parent	NOUN
grj-139	76	37	;	;	PUNCT
grj-139	76	38	fall	fall	VERB
grj-139	76	39	dormancy	dormancy	NOUN
grj-139	76	40	5	5	NUM
grj-139	76	41	s&w	s&w	PROPN
grj-139	76	42	fd6	fd6	PROPN
grj-139	76	43	y	y	PROPN
grj-139	76	44	y	y	PROPN
grj-139	76	45	s&w	s&w	PROPN
grj-139	76	46	seed	seed	NOUN
grj-139	76	47	co.	co.	PROPN
grj-139	76	48	elite	elite	ADJ
grj-139	76	49	parent	parent	NOUN
grj-139	76	50	;	;	PUNCT
grj-139	76	51	fall	fall	VERB
grj-139	76	52	dormancy	dormancy	NOUN
grj-139	76	53	6	6	NUM
grj-139	76	54	s&w	s&w	PROPN
grj-139	76	55	fd7	fd7	VERB
grj-139	76	56	y	y	PROPN
grj-139	76	57	y	y	PROPN
grj-139	76	58	s&w	s&w	PROPN
grj-139	76	59	seed	seed	PROPN
grj-139	76	60	co.	co.	PROPN
grj-139	76	61	elite	elite	ADJ
grj-139	76	62	parent	parent	NOUN
grj-139	76	63	;	;	PUNCT
grj-139	76	64	fall	fall	VERB
grj-139	76	65	dormancy	dormancy	NOUN
grj-139	76	66	7	7	NUM
grj-139	76	67	s&w	s&w	PROPN
grj-139	76	68	fd8	fd8	PRON
grj-139	76	69	y	y	PROPN
grj-139	76	70	y	y	PROPN
grj-139	76	71	s&w	s&w	PROPN
grj-139	76	72	seed	seed	PROPN
grj-139	76	73	co.	co.	PROPN
grj-139	76	74	elite	elite	ADJ
grj-139	76	75	parent	parent	NOUN
grj-139	76	76	;	;	PUNCT
grj-139	76	77	fall	fall	VERB
grj-139	76	78	dormancy	dormancy	NOUN
grj-139	76	79	8	8	NUM
grj-139	76	80	s&w	s&w	PROPN
grj-139	76	81	fd9a	fd9a	PROPN
grj-139	76	82	y	y	PROPN
grj-139	76	83	y	y	PROPN
grj-139	76	84	s&w	s&w	PROPN
grj-139	76	85	seed	seed	NOUN
grj-139	76	86	co.	co.	PROPN
grj-139	76	87	elite	elite	ADJ
grj-139	76	88	parent	parent	NOUN
grj-139	76	89	;	;	PUNCT
grj-139	76	90	fall	fall	VERB
grj-139	76	91	dormancy	dormancy	NOUN
grj-139	76	92	9	9	NUM
grj-139	76	93	s&w	s&w	PROPN
grj-139	76	94	sfd9b	sfd9b	PROPN
grj-139	76	95	y	y	PROPN
grj-139	76	96	y	y	PROPN
grj-139	76	97	s&w	s&w	PROPN
grj-139	76	98	seed	seed	NOUN
grj-139	76	99	co.	co.	PROPN
grj-139	76	100	elite	elite	ADJ
grj-139	76	101	parent	parent	NOUN
grj-139	76	102	;	;	PUNCT
grj-139	76	103	fall	fall	VERB
grj-139	76	104	dormancy	dormancy	NOUN
grj-139	76	105	9	9	NUM
grj-139	76	106	cadl-1	cadl-1	NUM
grj-139	76	107	y	y	PROPN
grj-139	76	108	y	y	PROPN
grj-139	76	109	n.	n.	PROPN
grj-139	76	110	young	young	PROPN
grj-139	76	111	cultivated	cultivate	VERB
grj-139	76	112	alfalfa	alfalfa	NOUN
grj-139	76	113	at	at	ADP
grj-139	76	114	diploid	diploid	ADJ
grj-139	76	115	level	level	NOUN
grj-139	76	116	cadl-3	cadl-3	NUM
grj-139	76	117	y	y	PROPN
grj-139	76	118	y	y	PROPN
grj-139	76	119	n.	n.	PROPN
grj-139	76	120	young	young	PROPN
grj-139	76	121	cultivated	cultivate	VERB
grj-139	76	122	alfalfa	alfalfa	NOUN
grj-139	76	123	at	at	ADP
grj-139	76	124	diploid	diploid	ADJ
grj-139	76	125	level	level	NOUN
grj-139	76	126	cadl-4	cadl-4	NOUN
grj-139	76	127	-	-	SYM
grj-139	76	128	5	5	NUM
grj-139	76	129	y	y	PROPN
grj-139	76	130	y	y	PROPN
grj-139	76	131	n.	n.	PROPN
grj-139	76	132	young	young	PROPN
grj-139	76	133	cultivated	cultivate	VERB
grj-139	76	134	alfalfa	alfalfa	NOUN
grj-139	76	135	at	at	ADP
grj-139	76	136	diploid	diploid	ADJ
grj-139	76	137	level	level	NOUN
grj-139	76	138	cadl-5	cadl-5	NOUN
grj-139	76	139	-	-	SYM
grj-139	76	140	3	3	NUM
grj-139	76	141	y	y	PROPN
grj-139	76	142	y	y	PROPN
grj-139	76	143	n.	n.	PROPN
grj-139	76	144	young	young	PROPN
grj-139	76	145	cultivated	cultivate	VERB
grj-139	76	146	alfalfa	alfalfa	NOUN
grj-139	76	147	at	at	ADP
grj-139	76	148	diploid	diploid	ADJ
grj-139	76	149	level	level	NOUN
grj-139	76	150	cadl-13	cadl-13	PROPN
grj-139	76	151	y	y	PROPN
grj-139	76	152	y	y	PROPN
grj-139	76	153	n.	n.	PROPN
grj-139	76	154	young	young	PROPN
grj-139	76	155	cultivated	cultivate	VERB
grj-139	76	156	alfalfa	alfalfa	NOUN
grj-139	76	157	at	at	ADP
grj-139	76	158	diploid	diploid	ADJ
grj-139	76	159	level	level	NOUN
grj-139	76	160	cadl-18	cadl-18	PROPN
grj-139	76	161	y	y	PROPN
grj-139	76	162	y	y	PROPN
grj-139	76	163	n.	n.	PROPN
grj-139	76	164	young	young	PROPN
grj-139	76	165	cultivated	cultivate	VERB
grj-139	76	166	alfalfa	alfalfa	NOUN
grj-139	76	167	at	at	ADP
grj-139	76	168	diploid	diploid	ADJ
grj-139	76	169	level	level	NOUN
grj-139	76	170	umn3988	umn3988	ADJ
grj-139	76	171	-	-	PUNCT
grj-139	76	172	bip	bip	PROPN
grj-139	76	173	y	y	PROPN
grj-139	76	174	y	y	PROPN
grj-139	76	175	d.	d.	PROPN
grj-139	76	176	samac	samac	PROPN
grj-139	76	177	biomass	biomass	NOUN
grj-139	76	178	type	type	NOUN
grj-139	76	179	regensy27x	regensy27x	PROPN
grj-139	76	180	y	y	PROPN
grj-139	76	181	y	y	PROPN
grj-139	76	182	d.	d.	PROPN
grj-139	76	183	samac	samac	PROPN
grj-139	76	184	regenerator	regenerator	NOUN
grj-139	76	185	;	;	PUNCT
grj-139	76	186	ref	ref	NOUN
grj-139	76	187	.	.	PUNCT
grj-139	77	1	genome	genome	NOUN
grj-139	77	2	i195	i195	PROPN
grj-139	77	3	y	y	PROPN
grj-139	77	4	y	y	PROPN
grj-139	77	5	n.	n.	PROPN
grj-139	77	6	young	young	PROPN
grj-139	77	7	waph5	waph5	PROPN
grj-139	77	8	;	;	PUNCT
grj-139	77	9	aphanomyces	aphanomyce	NOUN
grj-139	77	10	root	root	NOUN
grj-139	77	11	rot	rot	VERB
grj-139	77	12	ut14	ut14	PROPN
grj-139	77	13	-	-	PUNCT
grj-139	77	14	46	46	NUM
grj-139	77	15	sp	sp	ADP
grj-139	77	16	y	y	PROPN
grj-139	77	17	y	y	PROPN
grj-139	77	18	m.	m.	NOUN
grj-139	77	19	peel	peel	PROPN
grj-139	77	20	tetraploid	tetraploid	NOUN
grj-139	77	21	medicago	medicago	PROPN
grj-139	77	22	falcata	falcata	VERB
grj-139	77	23	ut27	ut27	PROPN
grj-139	77	24	-	-	PUNCT
grj-139	77	25	62	62	NUM
grj-139	77	26	y	y	PROPN
grj-139	77	27	y	y	PROPN
grj-139	77	28	m.	m.	NOUN
grj-139	77	29	peel	peel	PROPN
grj-139	77	30	elite	elite	ADJ
grj-139	77	31	parent	parent	NOUN
grj-139	77	32	;	;	PUNCT
grj-139	77	33	salt	salt	NOUN
grj-139	77	34	tolerant	tolerant	ADJ
grj-139	77	35	fl99	fl99	PROPN
grj-139	77	36	y	y	PROPN
grj-139	77	37	y	y	PROPN
grj-139	77	38	e.	e.	PROPN
grj-139	77	39	rios	rios	PROPN
grj-139	77	40	elite	elite	ADJ
grj-139	77	41	parent	parent	NOUN
grj-139	77	42	;	;	PUNCT
grj-139	77	43	fall	fall	VERB
grj-139	77	44	dormancy	dormancy	NOUN
grj-139	77	45	9	9	NUM
grj-139	77	46	bulldog	bulldog	NOUN
grj-139	77	47	505	505	NUM
grj-139	77	48	y	y	PROPN
grj-139	77	49	y	y	PROPN
grj-139	77	50	a.	a.	PROPN
grj-139	77	51	missaoui	missaoui	PROPN
grj-139	77	52	elite	elite	ADJ
grj-139	77	53	parent	parent	NOUN
grj-139	77	54	;	;	PUNCT
grj-139	77	55	fall	fall	VERB
grj-139	77	56	dormancy	dormancy	NOUN
grj-139	77	57	5	5	NUM
grj-139	77	58	gams	gams	PROPN
grj-139	77	59	1403	1403	NUM
grj-139	77	60	-	-	PUNCT
grj-139	77	61	fsh	fsh	NOUN
grj-139	77	62	y	y	PROPN
grj-139	77	63	y	y	PROPN
grj-139	77	64	a.	a.	PROPN
grj-139	77	65	missaoui	missaoui	PROPN
grj-139	77	66	elite	elite	ADJ
grj-139	77	67	parent	parent	NOUN
grj-139	77	68	;	;	PUNCT
grj-139	77	69	fall	fall	VERB
grj-139	77	70	dormancy	dormancy	NOUN
grj-139	77	71	7	7	NUM
grj-139	77	72	gams	gams	PROPN
grj-139	77	73	1404	1404	NUM
grj-139	77	74	-	-	PUNCT
grj-139	77	75	fsh	fsh	NOUN
grj-139	77	76	y	y	PROPN
grj-139	77	77	y	y	PROPN
grj-139	77	78	a.	a.	PROPN
grj-139	77	79	missaoui	missaoui	PROPN
grj-139	77	80	elite	elite	ADJ
grj-139	77	81	parent	parent	NOUN
grj-139	77	82	;	;	PUNCT
grj-139	77	83	fall	fall	VERB
grj-139	77	84	dormancy	dormancy	NOUN
grj-139	77	85	8	8	NUM
grj-139	77	86	gams	gams	PROPN
grj-139	77	87	1405	1405	NUM
grj-139	77	88	-	-	PUNCT
grj-139	77	89	fsh	fsh	NOUN
grj-139	77	90	y	y	PROPN
grj-139	77	91	y	y	PROPN
grj-139	77	92	a.	a.	PROPN
grj-139	77	93	missaoui	missaoui	PROPN
grj-139	77	94	elite	elite	ADJ
grj-139	77	95	parent	parent	NOUN
grj-139	77	96	;	;	PUNCT
grj-139	77	97	fall	fall	VERB
grj-139	77	98	dormancy	dormancy	NOUN
grj-139	77	99	9	9	NUM
grj-139	77	100	3010	3010	NUM
grj-139	77	101	y	y	PROPN
grj-139	77	102	y	y	PROPN
grj-139	77	103	a.	a.	PROPN
grj-139	77	104	missaoui	missaoui	PROPN
grj-139	77	105	elite	elite	ADJ
grj-139	77	106	parent	parent	NOUN
grj-139	77	107	;	;	PUNCT
grj-139	77	108	fall	fall	VERB
grj-139	77	109	dormancy	dormancy	NOUN
grj-139	77	110	3	3	NUM
grj-139	77	111	cw1010	cw1010	NOUN
grj-139	77	112	y	y	PROPN
grj-139	77	113	y	y	PROPN
grj-139	77	114	a.	a.	PROPN
grj-139	77	115	missaoui	missaoui	PROPN
grj-139	77	116	elite	elite	ADJ
grj-139	77	117	parent	parent	NOUN
grj-139	77	118	;	;	PUNCT
grj-139	77	119	fall	fall	VERB
grj-139	77	120	dormancy	dormancy	NOUN
grj-139	77	121	10	10	NUM
grj-139	77	122	cuf	cuf	PROPN
grj-139	77	123	101	101	NUM
grj-139	77	124	y	y	PROPN
grj-139	77	125	y	y	PROPN
grj-139	77	126	d.	d.	PROPN
grj-139	77	127	samac	samac	PROPN
grj-139	77	128	fall	fall	VERB
grj-139	77	129	dormancy	dormancy	NOUN
grj-139	77	130	10	10	NUM
grj-139	77	131	check	check	NOUN
grj-139	77	132	bip1	bip1	PROPN
grj-139	77	133	y	y	PROPN
grj-139	77	134	y	y	PROPN
grj-139	77	135	m.	m.	NOUN
grj-139	77	136	peel	peel	NOUN
grj-139	77	137	salt	salt	NOUN
grj-139	77	138	tolerant	tolerant	ADJ
grj-139	77	139	;	;	PUNCT
grj-139	77	140	27	27	NUM
grj-139	77	141	-	-	SYM
grj-139	77	142	62	62	NUM
grj-139	77	143	bip2	bip2	ADV
grj-139	77	144	y	y	PROPN
grj-139	77	145	y	y	PROPN
grj-139	77	146	m.	m.	NOUN
grj-139	77	147	peel	peel	NOUN
grj-139	77	148	salt	salt	NOUN
grj-139	77	149	tolerant	tolerant	ADJ
grj-139	77	150	;	;	PUNCT
grj-139	77	151	31	31	NUM
grj-139	77	152	-	-	SYM
grj-139	77	153	6	6	NUM
grj-139	77	154	bip3	bip3	PROPN
grj-139	77	155	y	y	PROPN
grj-139	77	156	y	y	PROPN
grj-139	77	157	m.	m.	NOUN
grj-139	77	158	peel	peel	PROPN
grj-139	77	159	semip	semip	NOUN
grj-139	77	160	;	;	PUNCT
grj-139	77	161	1	1	NUM
grj-139	77	162	-	-	SYM
grj-139	77	163	34	34	NUM
grj-139	77	164	bip4	bip4	PROPN
grj-139	77	165	y	y	PROPN
grj-139	77	166	y	y	PROPN
grj-139	77	167	m.	m.	NOUN
grj-139	77	168	peel	peel	PROPN
grj-139	77	169	semip	semip	NOUN
grj-139	77	170	;	;	PUNCT
grj-139	77	171	6	6	NUM
grj-139	77	172	-	-	SYM
grj-139	77	173	2	2	NUM
grj-139	77	174	bip5	bip5	NOUN
grj-139	77	175	y	y	PROPN
grj-139	77	176	y	y	PROPN
grj-139	77	177	m.	m.	NOUN
grj-139	77	178	peel	peel	PROPN
grj-139	77	179	semip	semip	NOUN
grj-139	77	180	;	;	PUNCT
grj-139	77	181	14	14	NUM
grj-139	77	182	-	-	SYM
grj-139	77	183	46	46	NUM
grj-139	77	184	bip6	bip6	PROPN
grj-139	77	185	y	y	PROPN
grj-139	77	186	y	y	PROPN
grj-139	77	187	m.	m.	NOUN
grj-139	77	188	peel	peel	PROPN
grj-139	77	189	drought	drought	PROPN
grj-139	77	190	(	(	PUNCT
grj-139	77	191	ut7	ut7	NOUN
grj-139	77	192	)	)	PUNCT
grj-139	77	193	;	;	PUNCT
grj-139	77	194	17	17	NUM
grj-139	77	195	-	-	SYM
grj-139	77	196	43	43	NUM
grj-139	77	197	bip7	bip7	NOUN
grj-139	77	198	y	y	PROPN
grj-139	77	199	y	y	PROPN
grj-139	77	200	m.	m.	NOUN
grj-139	77	201	peel	peel	PROPN
grj-139	77	202	drought	drought	NOUN
grj-139	77	203	(	(	PUNCT
grj-139	77	204	ut8	ut8	PROPN
grj-139	77	205	)	)	PUNCT
grj-139	77	206	;	;	PUNCT
grj-139	77	207	17	17	NUM
grj-139	77	208	-	-	SYM
grj-139	77	209	44	44	NUM
grj-139	77	210	bip8	bip8	NOUN
grj-139	77	211	y	y	PROPN
grj-139	77	212	y	y	PROPN
grj-139	77	213	m.	m.	NOUN
grj-139	77	214	peel	peel	PROPN
grj-139	77	215	drought	drought	NOUN
grj-139	77	216	(	(	PUNCT
grj-139	77	217	ut9	ut9	NOUN
grj-139	77	218	)	)	PUNCT
grj-139	77	219	;	;	PUNCT
grj-139	77	220	18	18	NUM
grj-139	77	221	-	-	SYM
grj-139	77	222	22	22	NUM
grj-139	77	223	bip9	bip9	PROPN
grj-139	77	224	y	y	PROPN
grj-139	77	225	y	y	PROPN
grj-139	77	226	m.	m.	NOUN
grj-139	77	227	peel	peel	NOUN
grj-139	77	228	drought	drought	PROPN
grj-139	77	229	(	(	PUNCT
grj-139	77	230	ut10	ut10	PROPN
grj-139	77	231	)	)	PUNCT
grj-139	77	232	;	;	PUNCT
grj-139	77	233	21	21	NUM
grj-139	77	234	-	-	SYM
grj-139	77	235	3	3	NUM
grj-139	77	236	bip10	bip10	PROPN
grj-139	77	237	y	y	PROPN
grj-139	77	238	y	y	PROPN
grj-139	77	239	m.	m.	NOUN
grj-139	77	240	peel	peel	NOUN
grj-139	77	241	drought	drought	NOUN
grj-139	77	242	(	(	PUNCT
grj-139	77	243	ut11	ut11	PROPN
grj-139	77	244	)	)	PUNCT
grj-139	77	245	;	;	PUNCT
grj-139	77	246	22	22	NUM
grj-139	77	247	-	-	SYM
grj-139	77	248	30	30	NUM
grj-139	77	249	bip11	bip11	PROPN
grj-139	77	250	y	y	PROPN
grj-139	77	251	y	y	PROPN
grj-139	77	252	m.	m.	NOUN
grj-139	77	253	peel	peel	PROPN
grj-139	77	254	drought	drought	NOUN
grj-139	77	255	(	(	PUNCT
grj-139	77	256	ut26	ut26	PROPN
grj-139	77	257	)	)	PUNCT
grj-139	77	258	;	;	PUNCT
grj-139	77	259	7	7	NUM
grj-139	77	260	-	-	SYM
grj-139	77	261	18	18	NUM
grj-139	77	262	bip12	bip12	NOUN
grj-139	77	263	y	y	PROPN
grj-139	77	264	y	y	PROPN
grj-139	77	265	m.	m.	NOUN
grj-139	77	266	peel	peel	NOUN
grj-139	77	267	drought	drought	NOUN
grj-139	77	268	(	(	PUNCT
grj-139	77	269	ut30	ut30	PROPN
grj-139	77	270	)	)	PUNCT
grj-139	77	271	;	;	PUNCT
grj-139	77	272	13	13	NUM
grj-139	77	273	-	-	SYM
grj-139	77	274	14	14	NUM
grj-139	77	275	wilson	wilson	PROPN
grj-139	77	276	n	n	PROPN
grj-139	77	277	y	y	PROPN
grj-139	77	278	l.-x	l.-x	PROPN
grj-139	77	279	.	.	PUNCT
grj-139	78	1	yu	yu	PROPN
grj-139	78	2	elite	elite	ADJ
grj-139	78	3	parent	parent	NOUN
grj-139	78	4	wa467895	wa467895	VERB
grj-139	78	5	n	n	CCONJ
grj-139	78	6	y	y	PROPN
grj-139	78	7	l.-x	l.-x	PROPN
grj-139	78	8	.	.	PUNCT
grj-139	79	1	yu	yu	PROPN
grj-139	79	2	elite	elite	ADJ
grj-139	79	3	parent	parent	NOUN
grj-139	79	4	cornell	cornell	PROPN
grj-139	79	5	ny1	ny1	PROPN
grj-139	79	6	n	n	PROPN
grj-139	79	7	y	y	PROPN
grj-139	79	8	d.	d.	PROPN
grj-139	79	9	viands	viand	VERB
grj-139	79	10	elite	elite	ADJ
grj-139	79	11	parent	parent	NOUN
grj-139	79	12	cornell	cornell	PROPN
grj-139	79	13	ny2	ny2	VERB
grj-139	79	14	n	n	PRON
grj-139	79	15	y	y	PROPN
grj-139	79	16	d.	d.	PROPN
grj-139	79	17	viands	viand	VERB
grj-139	79	18	elite	elite	ADJ
grj-139	79	19	parent	parent	NOUN
grj-139	79	20	cornell	cornell	NOUN
grj-139	79	21	ny3	ny3	NOUN
grj-139	80	1	n	n	PROPN
grj-139	80	2	y	y	PROPN
grj-139	80	3	d.	d.	PROPN
grj-139	80	4	viands	viand	VERB
grj-139	80	5	elite	elite	ADJ
grj-139	80	6	parent	parent	NOUN
grj-139	80	7	cornell	cornell	PROPN
grj-139	80	8	ny4	ny4	PROPN
grj-139	81	1	n	n	CCONJ
grj-139	81	2	y	y	PROPN
grj-139	81	3	d.	d.	PROPN
grj-139	81	4	viands	viand	VERB
grj-139	81	5	elite	elite	ADJ
grj-139	81	6	parent	parent	NOUN
grj-139	81	7	paf	paf	PROPN
grj-139	81	8	13	13	NUM
grj-139	81	9	5	5	NUM
grj-139	81	10	,	,	PUNCT
grj-139	81	11	11	11	NUM
grj-139	81	12	-	-	SYM
grj-139	81	13	1	1	NUM
grj-139	81	14	n	n	PROPN
grj-139	81	15	y	y	PROPN
grj-139	81	16	h.	h.	PROPN
grj-139	81	17	riday	riday	PROPN
grj-139	81	18	medicago	medicago	PROPN
grj-139	81	19	falcata	falcata	PROPN
grj-139	81	20	paf	paf	PROPN
grj-139	81	21	13	13	NUM
grj-139	81	22	2	2	NUM
grj-139	81	23	,	,	PUNCT
grj-139	82	1	9	9	NUM
grj-139	82	2	-	-	SYM
grj-139	82	3	4	4	NUM
grj-139	82	4	n	n	PROPN
grj-139	82	5	y	y	PROPN
grj-139	82	6	h.	h.	PROPN
grj-139	82	7	riday	riday	PROPN
grj-139	82	8	medicago	medicago	PROPN
grj-139	82	9	falcata	falcata	PROPN
grj-139	82	10	paf	paf	PROPN
grj-139	82	11	13	13	NUM
grj-139	82	12	9	9	NUM
grj-139	82	13	,	,	PUNCT
grj-139	82	14	10	10	NUM
grj-139	82	15	-	-	SYM
grj-139	82	16	5	5	NUM
grj-139	82	17	n	n	PROPN
grj-139	82	18	y	y	PROPN
grj-139	82	19	h.	h.	PROPN
grj-139	82	20	riday	riday	PROPN
grj-139	82	21	medicago	medicago	PROPN
grj-139	83	1	falcata	falcata	PROPN
grj-139	83	2	paf	paf	PROPN
grj-139	83	3	13	13	NUM
grj-139	83	4	7	7	NUM
grj-139	83	5	,	,	PUNCT
grj-139	83	6	21	21	NUM
grj-139	83	7	-	-	SYM
grj-139	83	8	2	2	NUM
grj-139	83	9	n	n	PROPN
grj-139	83	10	y	y	PROPN
grj-139	83	11	h.	h.	PROPN
grj-139	83	12	riday	riday	PROPN
grj-139	83	13	medicago	medicago	PROPN
grj-139	83	14	falcata	falcata	PROPN
grj-139	83	15	fal12	fal12	VERB
grj-139	83	16	1	1	NUM
grj-139	83	17	,	,	PUNCT
grj-139	83	18	11	11	NUM
grj-139	83	19	-	-	SYM
grj-139	83	20	5	5	NUM
grj-139	83	21	n	n	PROPN
grj-139	83	22	y	y	PROPN
grj-139	83	23	h.	h.	PROPN
grj-139	83	24	riday	riday	PROPN
grj-139	83	25	medicago	medicago	PROPN
grj-139	83	26	falcata	falcata	PROPN
grj-139	83	27	fal12	fal12	VERB
grj-139	83	28	4	4	NUM
grj-139	83	29	,	,	PUNCT
grj-139	83	30	12	12	NUM
grj-139	83	31	-	-	SYM
grj-139	83	32	4	4	NUM
grj-139	84	1	n	n	PROPN
grj-139	84	2	y	y	PROPN
grj-139	84	3	h.	h.	PROPN
grj-139	84	4	riday	riday	PROPN
grj-139	84	5	medicago	medicago	PROPN
grj-139	84	6	falcata	falcata	PROPN
grj-139	84	7	mav8	mav8	PROPN
grj-139	84	8	n	n	CCONJ
grj-139	84	9	y	y	PROPN
grj-139	84	10	d.	d.	PROPN
grj-139	84	11	samac	samac	PROPN
grj-139	84	12	elite	elite	ADJ
grj-139	84	13	parent	parent	NOUN
grj-139	84	14	aph	aph	PROPN
grj-139	84	15	2	2	NUM
grj-139	84	16	n	n	PROPN
grj-139	84	17	y	y	PROPN
grj-139	84	18	d.	d.	PROPN
grj-139	84	19	samac	samac	PROPN
grj-139	84	20	elite	elite	ADJ
grj-139	84	21	parent	parent	NOUN
grj-139	84	22	mav13	mav13	PROPN
grj-139	84	23	n	n	CCONJ
grj-139	84	24	y	y	PROPN
grj-139	84	25	d.	d.	PROPN
grj-139	84	26	samac	samac	PROPN
grj-139	84	27	elite	elite	ADJ
grj-139	84	28	parent	parent	NOUN
grj-139	84	29	mav14	mav14	PROPN
grj-139	84	30	n	n	CCONJ
grj-139	84	31	y	y	PROPN
grj-139	84	32	d.	d.	PROPN
grj-139	84	33	samac	samac	PROPN
grj-139	84	34	elite	elite	ADJ
grj-139	84	35	parent	parent	NOUN
grj-139	84	36	mav15	mav15	PROPN
grj-139	84	37	n	n	PROPN
grj-139	84	38	y	y	PROPN
grj-139	84	39	d.	d.	PROPN
grj-139	84	40	samac	samac	PROPN
grj-139	84	41	elite	elite	ADJ
grj-139	84	42	parent	parent	NOUN
grj-139	84	43	zg9	zg9	PROPN
grj-139	84	44	n	n	CCONJ
grj-139	84	45	y	y	PROPN
grj-139	84	46	d.	d.	PROPN
grj-139	84	47	samac	samac	PROPN
grj-139	84	48	elite	elite	ADJ
grj-139	84	49	parent	parent	NOUN
grj-139	84	50	zg20	zg20	PROPN
grj-139	84	51	n	n	CCONJ
grj-139	84	52	y	y	PROPN
grj-139	84	53	d.	d.	PROPN
grj-139	84	54	samac	samac	PROPN
grj-139	84	55	elite	elite	ADJ
grj-139	84	56	parent	parent	NOUN
grj-139	84	57	zg21	zg21	PROPN
grj-139	84	58	n	n	PROPN
grj-139	84	59	y	y	PROPN
grj-139	84	60	d.	d.	PROPN
grj-139	84	61	samac	samac	PROPN
grj-139	84	62	elite	elite	ADJ
grj-139	84	63	parent	parent	NOUN
grj-139	84	64	zg23	zg23	PROPN
grj-139	84	65	n	n	PROPN
grj-139	84	66	y	y	PROPN
grj-139	84	67	d.	d.	PROPN
grj-139	84	68	samac	samac	PROPN
grj-139	84	69	elite	elite	ADJ
grj-139	84	70	parent	parent	NOUN
grj-139	84	71	zg25	zg25	PROPN
grj-139	84	72	n	n	ADP
grj-139	84	73	y	y	PROPN
grj-139	84	74	d.	d.	PROPN
grj-139	84	75	samac	samac	PROPN
grj-139	84	76	elite	elite	ADJ
grj-139	84	77	parent	parent	NOUN
grj-139	84	78	aph	aph	PROPN
grj-139	84	79	11	11	NUM
grj-139	84	80	n	n	PROPN
grj-139	84	81	y	y	PROPN
grj-139	84	82	d.	d.	PROPN
grj-139	84	83	samac	samac	PROPN
grj-139	84	84	elite	elite	ADJ
grj-139	84	85	parent	parent	NOUN
grj-139	84	86	aph	aph	PROPN
grj-139	84	87	47	47	NUM
grj-139	84	88	n	n	PROPN
grj-139	84	89	y	y	PROPN
grj-139	84	90	d.	d.	PROPN
grj-139	84	91	samac	samac	PROPN
grj-139	84	92	elite	elite	ADJ
grj-139	84	93	parent	parent	NOUN
grj-139	84	94	pi	pi	NOUN
grj-139	84	95	516640	516640	NUM
grj-139	84	96	n	n	PROPN
grj-139	84	97	y	y	PROPN
grj-139	84	98	b.	b.	PROPN
grj-139	84	99	irish	irish	PROPN
grj-139	85	1	medicago	medicago	PROPN
grj-139	85	2	arabica	arabica	PROPN
grj-139	85	3	pi	pi	NOUN
grj-139	85	4	504540	504540	NUM
grj-139	86	1	n	n	CCONJ
grj-139	86	2	y	y	PROPN
grj-139	86	3	b.	b.	PROPN
grj-139	86	4	irish	irish	PROPN
grj-139	86	5	medicago	medicago	PROPN
grj-139	86	6	arborea	arborea	PROPN
grj-139	86	7	pi	pi	PROPN
grj-139	86	8	495215	495215	NUM
grj-139	86	9	n	n	CCONJ
grj-139	86	10	y	y	PROPN
grj-139	86	11	b.	b.	PROPN
grj-139	86	12	irish	irish	PROPN
grj-139	87	1	medicago	medicago	PROPN
grj-139	87	2	bonarotiana	bonarotiana	PROPN
grj-139	87	3	pi	pi	PROPN
grj-139	87	4	315458	315458	NUM
grj-139	88	1	n	n	PROPN
grj-139	88	2	y	y	PROPN
grj-139	88	3	b.	b.	PROPN
grj-139	88	4	irish	irish	PROPN
grj-139	89	1	medicago	medicago	PROPN
grj-139	89	2	cancellata	cancellata	PROPN
grj-139	89	3	pi	pi	PROPN
grj-139	89	4	498767	498767	NUM
grj-139	89	5	n	n	CCONJ
grj-139	89	6	y	y	PROPN
grj-139	89	7	b.	b.	PROPN
grj-139	89	8	irish	irish	PROPN
grj-139	90	1	medicago	medicago	PROPN
grj-139	90	2	ciliaris	ciliaris	PROPN
grj-139	90	3	w6	w6	PROPN
grj-139	90	4	32886	32886	NUM
grj-139	90	5	n	n	PROPN
grj-139	90	6	y	y	PROPN
grj-139	90	7	b.	b.	PROPN
grj-139	90	8	irish	irish	PROPN
grj-139	91	1	medicago	medicago	PROPN
grj-139	91	2	daghestanica	daghestanica	PROPN
grj-139	91	3	pi	pi	PROPN
grj-139	91	4	538998	538998	NUM
grj-139	91	5	n	n	PROPN
grj-139	92	1	y	y	PROPN
grj-139	92	2	b.	b.	PROPN
grj-139	92	3	irish	irish	PROPN
grj-139	93	1	medicago	medicago	PROPN
grj-139	93	2	hybrida	hybrida	PROPN
grj-139	93	3	pi	pi	PROPN
grj-139	93	4	498849	498849	NUM
grj-139	93	5	n	n	PROPN
grj-139	93	6	y	y	PROPN
grj-139	93	7	b.	b.	PROPN
grj-139	93	8	irish	irish	PROPN
grj-139	93	9	medicago	medicago	PROPN
grj-139	93	10	laciniata	laciniata	PROPN
grj-139	93	11	pi	pi	PROPN
grj-139	93	12	537186	537186	NUM
grj-139	93	13	n	n	PROPN
grj-139	93	14	y	y	PROPN
grj-139	93	15	b.	b.	PROPN
grj-139	93	16	irish	irish	PROPN
grj-139	94	1	medicago	medicago	PROPN
grj-139	94	2	littoralis	littoralis	PROPN
grj-139	94	3	pi	pi	VERB
grj-139	94	4	516711	516711	NUM
grj-139	94	5	n	n	PROPN
grj-139	94	6	y	y	PROPN
grj-139	94	7	b.	b.	PROPN
grj-139	94	8	irish	irish	PROPN
grj-139	95	1	medicago	medicago	PROPN
grj-139	95	2	marina	marina	PROPN
grj-139	95	3	pi	pi	PROPN
grj-139	95	4	287999	287999	NUM
grj-139	95	5	n	n	PROPN
grj-139	95	6	y	y	PROPN
grj-139	95	7	b.	b.	PROPN
grj-139	95	8	irish	irish	PROPN
grj-139	95	9	medicago	medicago	PROPN
grj-139	95	10	monspelliaca	monspelliaca	PROPN
grj-139	95	11	pi	pi	PROPN
grj-139	95	12	537259	537259	NUM
grj-139	95	13	n	n	PROPN
grj-139	95	14	y	y	PROPN
grj-139	95	15	b.	b.	PROPN
grj-139	95	16	irish	irish	PROPN
grj-139	95	17	medicago	medicago	PROPN
grj-139	95	18	murex	murex	PROPN
grj-139	95	19	pi	pi	PROPN
grj-139	95	20	220021	220021	NUM
grj-139	95	21	n	n	PROPN
grj-139	95	22	y	y	PROPN
grj-139	95	23	b.	b.	PROPN
grj-139	95	24	irish	irish	PROPN
grj-139	96	1	medicago	medicago	PROPN
grj-139	96	2	orbicularis	orbicularis	PROPN
grj-139	96	3	pi	pi	PROPN
grj-139	96	4	464704	464704	NUM
grj-139	96	5	n	n	PROPN
grj-139	96	6	y	y	PROPN
grj-139	96	7	b.	b.	PROPN
grj-139	97	1	irish	irish	PROPN
grj-139	98	1	medicago	medicago	PROPN
grj-139	98	2	papillosa	papillosa	PROPN
grj-139	98	3	pi	pi	PROPN
grj-139	98	4	253450	253450	NUM
grj-139	98	5	n	n	PROPN
grj-139	98	6	y	y	PROPN
grj-139	98	7	b.	b.	PROPN
grj-139	98	8	irish	irish	PROPN
grj-139	99	1	medicago	medicago	PROPN
grj-139	99	2	pironae	pironae	PROPN
grj-139	99	3	w6	w6	PROPN
grj-139	99	4	5252	5252	PROPN
grj-139	99	5	n	n	PROPN
grj-139	99	6	y	y	PROPN
grj-139	99	7	b.	b.	PROPN
grj-139	99	8	irish	irish	PROPN
grj-139	100	1	medicago	medicago	PROPN
grj-139	100	2	polymorpha	polymorpha	PROPN
grj-139	100	3	pi	pi	PROPN
grj-139	100	4	150564	150564	NUM
grj-139	100	5	n	n	PROPN
grj-139	100	6	y	y	PROPN
grj-139	100	7	b.	b.	PROPN
grj-139	100	8	irish	irish	PROPN
grj-139	101	1	medicago	medicago	PROPN
grj-139	101	2	popovii	popovii	VERB
grj-139	101	3	pi	pi	NOUN
grj-139	101	4	577446	577446	NUM
grj-139	101	5	n	n	PROPN
grj-139	101	6	y	y	PROPN
grj-139	101	7	b.	b.	PROPN
grj-139	101	8	irish	irish	PROPN
grj-139	101	9	medicago	medicago	PROPN
grj-139	101	10	prostrata	prostrata	PROPN
grj-139	101	11	pi	pi	NOUN
grj-139	101	12	631912	631912	NUM
grj-139	101	13	n	n	PROPN
grj-139	102	1	y	y	PROPN
grj-139	102	2	b.	b.	PROPN
grj-139	102	3	irish	irish	PROPN
grj-139	103	1	medicago	medicago	AUX
grj-139	103	2	ruthenica	ruthenica	VERB
grj-139	103	3	pi	pi	PROPN
grj-139	103	4	631715	631715	NUM
grj-139	103	5	n	n	PROPN
grj-139	103	6	y	y	PROPN
grj-139	103	7	b.	b.	PROPN
grj-139	103	8	irish	irish	PROPN
grj-139	103	9	medicago	medicago	PROPN
grj-139	103	10	sativa	sativa	PROPN
grj-139	103	11	nothosubsp	nothosubsp	PROPN
grj-139	103	12	.	.	PUNCT
grj-139	104	1	tunetana	tunetana	PROPN
grj-139	104	2	pi	pi	PROPN
grj-139	104	3	631714	631714	NUM
grj-139	104	4	n	n	PROPN
grj-139	104	5	y	y	PROPN
grj-139	104	6	b.	b.	PROPN
grj-139	104	7	irish	irish	PROPN
grj-139	104	8	medicago	medicago	PROPN
grj-139	104	9	sativa	sativa	PROPN
grj-139	104	10	nothosubsp	nothosubsp	PROPN
grj-139	104	11	.	.	PUNCT
grj-139	105	1	tunetana	tunetana	PROPN
grj-139	105	2	pi	pi	PROPN
grj-139	105	3	631952	631952	NUM
grj-139	105	4	n	n	PROPN
grj-139	105	5	y	y	PROPN
grj-139	105	6	b.	b.	PROPN
grj-139	105	7	irish	irish	PROPN
grj-139	105	8	medicago	medicago	PROPN
grj-139	105	9	sativa	sativa	PROPN
grj-139	105	10	nothosubsp	nothosubsp	PROPN
grj-139	105	11	.	.	PUNCT
grj-139	106	1	varia	varia	PROPN
grj-139	106	2	pi	pi	NOUN
grj-139	106	3	631920	631920	NUM
grj-139	106	4	n	n	PROPN
grj-139	106	5	y	y	PROPN
grj-139	106	6	b.	b.	PROPN
grj-139	106	7	irish	irish	PROPN
grj-139	106	8	medicago	medicago	PROPN
grj-139	106	9	sativa	sativa	PROPN
grj-139	106	10	nothosubsp	nothosubsp	PROPN
grj-139	106	11	.	.	PUNCT
grj-139	107	1	varia	varia	PROPN
grj-139	107	2	pi	pi	NOUN
grj-139	107	3	631923	631923	NUM
grj-139	107	4	n	n	PROPN
grj-139	107	5	y	y	PROPN
grj-139	107	6	b.	b.	PROPN
grj-139	108	1	irish	irish	PROPN
grj-139	108	2	medicago	medicago	PROPN
grj-139	108	3	sativa	sativa	PROPN
grj-139	108	4	subsp	subsp	NOUN
grj-139	108	5	.	.	PUNCT
grj-139	109	1	caerulea	caerulea	PROPN
grj-139	109	2	pi	pi	NOUN
grj-139	109	3	631921	631921	NUM
grj-139	110	1	n	n	PROPN
grj-139	110	2	y	y	PROPN
grj-139	110	3	b.	b.	PROPN
grj-139	110	4	irish	irish	PROPN
grj-139	110	5	medicago	medicago	PROPN
grj-139	110	6	sativa	sativa	PROPN
grj-139	110	7	subsp	subsp	NOUN
grj-139	110	8	.	.	PUNCT
grj-139	111	1	caerulea	caerulea	PROPN
grj-139	111	2	pi	pi	PROPN
grj-139	111	3	641405	641405	NUM
grj-139	111	4	n	n	PROPN
grj-139	111	5	y	y	PROPN
grj-139	111	6	b.	b.	PROPN
grj-139	111	7	irish	irish	PROPN
grj-139	111	8	medicago	medicago	PROPN
grj-139	111	9	sativa	sativa	PROPN
grj-139	111	10	subsp	subsp	NOUN
grj-139	111	11	.	.	PUNCT
grj-139	112	1	glomerata	glomerata	NOUN
grj-139	112	2	pi	pi	PROPN
grj-139	112	3	631978	631978	NUM
grj-139	112	4	n	n	PROPN
grj-139	112	5	y	y	PROPN
grj-139	112	6	b.	b.	PROPN
grj-139	113	1	irish	irish	PROPN
grj-139	113	2	medicago	medicago	PROPN
grj-139	113	3	sativa	sativa	PROPN
grj-139	113	4	subsp	subsp	NOUN
grj-139	113	5	.	.	PUNCT
grj-139	114	1	glomerata	glomerata	NOUN
grj-139	114	2	pi	pi	PROPN
grj-139	114	3	631869	631869	NUM
grj-139	115	1	n	n	PROPN
grj-139	115	2	y	y	PROPN
grj-139	115	3	b.	b.	PROPN
grj-139	115	4	irish	irish	PROPN
grj-139	115	5	medicago	medicago	PROPN
grj-139	115	6	sativa	sativa	PROPN
grj-139	115	7	var	var	PROPN
grj-139	115	8	.	.	PUNCT
grj-139	116	1	viscosa	viscosa	PROPN
grj-139	116	2	pi	pi	PROPN
grj-139	116	3	631870	631870	NUM
grj-139	116	4	n	n	PROPN
grj-139	116	5	y	y	PROPN
grj-139	116	6	b.	b.	PROPN
grj-139	116	7	irish	irish	PROPN
grj-139	116	8	medicago	medicago	PROPN
grj-139	116	9	sativa	sativa	PROPN
grj-139	116	10	var	var	PROPN
grj-139	116	11	.	.	PUNCT
grj-139	117	1	viscosa	viscosa	PROPN
grj-139	117	2	pi	pi	PROPN
grj-139	117	3	197356	197356	NUM
grj-139	117	4	n	n	PROPN
grj-139	117	5	y	y	PROPN
grj-139	117	6	b.	b.	PROPN
grj-139	117	7	irish	irish	PROPN
grj-139	117	8	medicago	medicago	PROPN
grj-139	117	9	scutellata	scutellata	PROPN
grj-139	118	1	i195	i195	PROPN
grj-139	118	2	x	x	SYM
grj-139	118	3	j432	j432	PROPN
grj-139	118	4	n	n	CCONJ
grj-139	118	5	y	y	PROPN
grj-139	118	6	d.	d.	PROPN
grj-139	118	7	samac	samac	PROPN
grj-139	118	8	f1	f1	PROPN
grj-139	118	9	population	population	NOUN
grj-139	118	10	(	(	PUNCT
grj-139	118	11	184	184	NUM
grj-139	118	12	progeny	progeny	NOUN
grj-139	118	13	)	)	PUNCT
grj-139	118	14	aphbc1	aphbc1	NOUN
grj-139	118	15	n	n	CCONJ
grj-139	118	16	y	y	PROPN
grj-139	118	17	d.	d.	PROPN
grj-139	118	18	samac	samac	PROPN
grj-139	118	19	bc1	bc1	NOUN
grj-139	118	20	population	population	NOUN
grj-139	118	21	(	(	PUNCT
grj-139	118	22	94	94	NUM
grj-139	118	23	progeny	progeny	NOUN
grj-139	118	24	)	)	PUNCT
grj-139	118	25	figure	figure	NOUN
grj-139	118	26	2	2	NUM
grj-139	118	27	:	:	PUNCT
grj-139	118	28	filters	filter	NOUN
grj-139	118	29	and	and	CCONJ
grj-139	118	30	criteria	criterion	NOUN
grj-139	118	31	applied	apply	VERB
grj-139	118	32	to	to	PART
grj-139	118	33	produce	produce	VERB
grj-139	118	34	the	the	DET
grj-139	118	35	3k	3k	PROPN
grj-139	118	36	dartag	dartag	PROPN
grj-139	118	37	snp	snp	PROPN
grj-139	118	38	panel	panel	NOUN
grj-139	118	39	from	from	ADP
grj-139	118	40	the	the	DET
grj-139	118	41	whole	whole	ADJ
grj-139	118	42	-	-	PUNCT
grj-139	118	43	genome	genome	NOUN
grj-139	118	44	sequencing	sequencing	NOUN
grj-139	118	45	(	(	PUNCT
grj-139	118	46	wgs	wgs	NOUN
grj-139	118	47	)	)	PUNCT
grj-139	118	48	of	of	ADP
grj-139	118	49	the	the	DET
grj-139	118	50	alfalfa	alfalfa	NOUN
grj-139	118	51	diversity	diversity	NOUN
grj-139	118	52	panel	panel	NOUN
grj-139	118	53	.	.	PUNCT
grj-139	119	1	m	m	PROPN
grj-139	119	2	,	,	PUNCT
grj-139	119	3	millions	million	NOUN
grj-139	119	4	;	;	PUNCT
grj-139	119	5	k	k	X
grj-139	119	6	,	,	PUNCT
grj-139	119	7	thousands	thousand	NOUN
grj-139	119	8	.	.	PUNCT
grj-139	120	1	figure	figure	VERB
grj-139	120	2	3	3	NUM
grj-139	120	3	:	:	PUNCT
grj-139	120	4	composite	composite	ADJ
grj-139	120	5	genetic	genetic	ADJ
grj-139	120	6	maps	map	NOUN
grj-139	120	7	of	of	ADP
grj-139	120	8	a	a	DET
grj-139	120	9	bi	bi	ADJ
grj-139	120	10	-	-	ADJ
grj-139	120	11	parental	parental	ADJ
grj-139	120	12	f1	f1	NOUN
grj-139	120	13	and	and	CCONJ
grj-139	120	14	a	a	DET
grj-139	120	15	backcross	backcross	NOUN
grj-139	120	16	(	(	PUNCT
grj-139	120	17	bc1	bc1	NOUN
grj-139	120	18	)	)	PUNCT
grj-139	120	19	population	population	NOUN
grj-139	120	20	.	.	PUNCT
grj-139	121	1	a	a	DET
grj-139	121	2	)	)	PUNCT
grj-139	121	3	regeneration	regeneration	NOUN
grj-139	121	4	of	of	ADP
grj-139	121	5	the	the	DET
grj-139	121	6	eight	eight	NUM
grj-139	121	7	linkage	linkage	NOUN
grj-139	121	8	groups	group	NOUN
grj-139	121	9	of	of	ADP
grj-139	121	10	alfalfa	alfalfa	NOUN
grj-139	121	11	genome	genome	NOUN
grj-139	121	12	.	.	PUNCT
grj-139	122	1	scale	scale	NOUN
grj-139	122	2	bar	bar	NOUN
grj-139	122	3	is	be	AUX
grj-139	122	4	shown	show	VERB
grj-139	122	5	in	in	ADP
grj-139	122	6	cm	cm	PROPN
grj-139	122	7	.	.	PUNCT
grj-139	123	1	b	b	X
grj-139	123	2	)	)	PUNCT
grj-139	123	3	scatter	scatter	NOUN
grj-139	123	4	plots	plot	NOUN
grj-139	123	5	showing	show	VERB
grj-139	123	6	the	the	DET
grj-139	123	7	relationship	relationship	NOUN
grj-139	123	8	of	of	ADP
grj-139	123	9	genetic	genetic	ADJ
grj-139	123	10	distance	distance	NOUN
grj-139	123	11	(	(	PUNCT
grj-139	123	12	cm	cm	NOUN
grj-139	123	13	)	)	PUNCT
grj-139	123	14	to	to	ADP
grj-139	123	15	physical	physical	ADJ
grj-139	123	16	distance	distance	NOUN
grj-139	123	17	(	(	PUNCT
grj-139	123	18	mbp	mbp	NOUN
grj-139	123	19	)	)	PUNCT
grj-139	123	20	for	for	ADP
grj-139	123	21	each	each	PRON
grj-139	123	22	of	of	ADP
grj-139	123	23	the	the	DET
grj-139	123	24	eight	eight	NUM
grj-139	123	25	linkage	linkage	NOUN
grj-139	123	26	groups	group	NOUN
grj-139	123	27	.	.	PUNCT
grj-139	124	1	using	use	VERB
grj-139	124	2	the	the	DET
grj-139	124	3	3k	3k	NUM
grj-139	124	4	panel	panel	NOUN
grj-139	124	5	genotyping	genotype	VERB
grj-139	124	6	results	result	NOUN
grj-139	124	7	,	,	PUNCT
grj-139	124	8	we	we	PRON
grj-139	124	9	generated	generate	VERB
grj-139	124	10	linkage	linkage	NOUN
grj-139	124	11	maps	map	NOUN
grj-139	124	12	for	for	ADP
grj-139	124	13	two	two	NUM
grj-139	124	14	distinct	distinct	ADJ
grj-139	124	15	populations	population	NOUN
grj-139	124	16	,	,	PUNCT
grj-139	124	17	an	an	DET
grj-139	124	18	f1	f1	NOUN
grj-139	124	19	and	and	CCONJ
grj-139	124	20	a	a	DET
grj-139	124	21	backcross	backcross	NOUN
grj-139	124	22	(	(	PUNCT
grj-139	124	23	bc1	bc1	NOUN
grj-139	124	24	)	)	PUNCT
grj-139	124	25	that	that	PRON
grj-139	124	26	share	share	VERB
grj-139	124	27	the	the	DET
grj-139	124	28	parent	parent	NOUN
grj-139	124	29	i195	i195	PROPN
grj-139	124	30	.	.	PROPN
grj-139	124	31	for	for	ADP
grj-139	124	32	the	the	DET
grj-139	124	33	f1	f1	ADJ
grj-139	124	34	population	population	NOUN
grj-139	124	35	,	,	PUNCT
grj-139	124	36	individuals	individual	NOUN
grj-139	124	37	were	be	AUX
grj-139	124	38	derived	derive	VERB
grj-139	124	39	from	from	ADP
grj-139	124	40	a	a	DET
grj-139	124	41	cross	cross	NOUN
grj-139	124	42	between	between	ADP
grj-139	124	43	parents	parent	NOUN
grj-139	124	44	i195	i195	PROPN
grj-139	124	45	and	and	CCONJ
grj-139	124	46	j432	j432	PROPN
grj-139	124	47	,	,	PUNCT
grj-139	124	48	which	which	PRON
grj-139	124	49	are	be	AUX
grj-139	124	50	resistant	resistant	ADJ
grj-139	124	51	and	and	CCONJ
grj-139	124	52	susceptible	susceptible	ADJ
grj-139	124	53	to	to	ADP
grj-139	124	54	aphamomyces	aphamomyce	NOUN
grj-139	124	55	euteiches	euteiche	NOUN
grj-139	124	56	,	,	PUNCT
grj-139	124	57	respectively	respectively	ADV
grj-139	124	58	.	.	PUNCT
grj-139	125	1	meanwhile	meanwhile	ADV
grj-139	125	2	,	,	PUNCT
grj-139	125	3	the	the	DET
grj-139	125	4	bc1	bc1	NOUN
grj-139	125	5	population	population	NOUN
grj-139	125	6	was	be	AUX
grj-139	125	7	obtained	obtain	VERB
grj-139	125	8	through	through	ADP
grj-139	125	9	a	a	DET
grj-139	125	10	cross	cross	NOUN
grj-139	125	11	between	between	ADP
grj-139	125	12	i195	i195	PROPN
grj-139	125	13	and	and	CCONJ
grj-139	125	14	a	a	DET
grj-139	125	15	progeny	progeny	NOUN
grj-139	125	16	(	(	PUNCT
grj-139	125	17	85	85	NUM
grj-139	125	18	-	-	SYM
grj-139	125	19	209	209	NUM
grj-139	125	20	)	)	PUNCT
grj-139	125	21	from	from	ADP
grj-139	125	22	the	the	DET
grj-139	125	23	above	above	ADJ
grj-139	125	24	f1	f1	PROPN
grj-139	125	25	population	population	NOUN
grj-139	125	26	.	.	PUNCT
grj-139	126	1	initially	initially	ADV
grj-139	126	2	,	,	PUNCT
grj-139	126	3	we	we	PRON
grj-139	126	4	constructed	construct	VERB
grj-139	126	5	individual	individual	ADJ
grj-139	126	6	genetic	genetic	ADJ
grj-139	126	7	maps	map	NOUN
grj-139	126	8	for	for	ADP
grj-139	126	9	the	the	DET
grj-139	126	10	f1	f1	NOUN
grj-139	126	11	and	and	CCONJ
grj-139	126	12	bc1	bc1	NOUN
grj-139	126	13	populations	population	NOUN
grj-139	126	14	.	.	PUNCT
grj-139	127	1	genotype	genotype	NOUN
grj-139	127	2	dosages	dosage	NOUN
grj-139	127	3	for	for	ADP
grj-139	127	4	both	both	PRON
grj-139	127	5	were	be	AUX
grj-139	127	6	determined	determine	VERB
grj-139	127	7	using	use	VERB
grj-139	127	8	updog	updog	NOUN
grj-139	127	9	software	software	NOUN
grj-139	127	10	(	(	PUNCT
grj-139	127	11	gerard	gerard	NOUN
grj-139	127	12	,	,	PUNCT
grj-139	127	13	ferrão	ferrão	PROPN
grj-139	127	14	,	,	PUNCT
grj-139	127	15	garcia	garcia	PROPN
grj-139	127	16	,	,	PUNCT
grj-139	127	17	&	&	CCONJ
grj-139	127	18	stephens	stephens	PROPN
grj-139	127	19	,	,	PUNCT
grj-139	127	20	2018	2018	NUM
grj-139	127	21	)	)	PUNCT
grj-139	127	22	.	.	PUNCT
grj-139	128	1	subsequently	subsequently	ADV
grj-139	128	2	,	,	PUNCT
grj-139	128	3	updog	updog	NOUN
grj-139	128	4	-	-	PUNCT
grj-139	128	5	generated	generate	VERB
grj-139	128	6	objects	object	NOUN
grj-139	128	7	were	be	AUX
grj-139	128	8	fed	feed	VERB
grj-139	128	9	into	into	ADP
grj-139	128	10	mappoly	mappoly	ADJ
grj-139	128	11	software	software	NOUN
grj-139	128	12	(	(	PUNCT
grj-139	128	13	mollinari	mollinari	PROPN
grj-139	128	14	&	&	CCONJ
grj-139	128	15	garcia	garcia	PROPN
grj-139	128	16	,	,	PUNCT
grj-139	128	17	2019	2019	NUM
grj-139	128	18	;	;	PUNCT
grj-139	128	19	mollinari	mollinari	PROPN
grj-139	128	20	et	et	PROPN
grj-139	128	21	al	al	PROPN
grj-139	128	22	.	.	PROPN
grj-139	128	23	,	,	PUNCT
grj-139	128	24	2020	2020	NUM
grj-139	128	25	)	)	PUNCT
grj-139	128	26	to	to	PART
grj-139	128	27	build	build	VERB
grj-139	128	28	separate	separate	ADJ
grj-139	128	29	genetic	genetic	ADJ
grj-139	128	30	maps	map	NOUN
grj-139	128	31	for	for	ADP
grj-139	128	32	each	each	DET
grj-139	128	33	population	population	NOUN
grj-139	128	34	.	.	PUNCT
grj-139	129	1	a	a	DET
grj-139	129	2	standard	standard	ADJ
grj-139	129	3	screening	screening	NOUN
grj-139	129	4	was	be	AUX
grj-139	129	5	performed	perform	VERB
grj-139	129	6	based	base	VERB
grj-139	129	7	on	on	ADP
grj-139	129	8	missing	miss	VERB
grj-139	129	9	data	datum	NOUN
grj-139	129	10	and	and	CCONJ
grj-139	129	11	mendelian	mendelian	ADJ
grj-139	129	12	segregation	segregation	NOUN
grj-139	129	13	fit	fit	ADJ
grj-139	129	14	.	.	PUNCT
grj-139	130	1	we	we	PRON
grj-139	130	2	calculated	calculate	VERB
grj-139	130	3	the	the	DET
grj-139	130	4	recombination	recombination	NOUN
grj-139	130	5	fraction	fraction	NOUN
grj-139	130	6	matrix	matrix	NOUN
grj-139	130	7	between	between	ADP
grj-139	130	8	all	all	DET
grj-139	130	9	retained	retain	VERB
grj-139	130	10	markers	marker	NOUN
grj-139	130	11	,	,	PUNCT
grj-139	130	12	using	use	VERB
grj-139	130	13	this	this	DET
grj-139	130	14	information	information	NOUN
grj-139	130	15	to	to	PART
grj-139	130	16	cluster	cluster	NOUN
grj-139	130	17	markers	marker	NOUN
grj-139	130	18	into	into	ADP
grj-139	130	19	linkage	linkage	NOUN
grj-139	130	20	groups	group	NOUN
grj-139	130	21	.	.	PUNCT
grj-139	131	1	according	accord	VERB
grj-139	131	2	to	to	ADP
grj-139	131	3	available	available	ADJ
grj-139	131	4	genome	genome	NOUN
grj-139	131	5	information	information	NOUN
grj-139	131	6	,	,	PUNCT
grj-139	131	7	most	most	ADJ
grj-139	131	8	of	of	ADP
grj-139	131	9	these	these	DET
grj-139	131	10	markers	marker	NOUN
grj-139	131	11	corresponded	correspond	VERB
grj-139	131	12	with	with	ADP
grj-139	131	13	specific	specific	ADJ
grj-139	131	14	chromosomes	chromosome	NOUN
grj-139	131	15	.	.	PUNCT
grj-139	132	1	notably	notably	ADV
grj-139	132	2	,	,	PUNCT
grj-139	132	3	a	a	DET
grj-139	132	4	few	few	ADJ
grj-139	132	5	markers	marker	NOUN
grj-139	132	6	that	that	PRON
grj-139	132	7	were	be	AUX
grj-139	132	8	mapped	map	VERB
grj-139	132	9	outside	outside	ADP
grj-139	132	10	their	their	PRON
grj-139	132	11	physical	physical	ADJ
grj-139	132	12	position	position	NOUN
grj-139	132	13	still	still	ADV
grj-139	132	14	presented	present	VERB
grj-139	132	15	consistent	consistent	ADJ
grj-139	132	16	linkage	linkage	NOUN
grj-139	132	17	with	with	ADP
grj-139	132	18	the	the	DET
grj-139	132	19	markers	marker	NOUN
grj-139	132	20	in	in	ADP
grj-139	132	21	their	their	PRON
grj-139	132	22	assigned	assign	VERB
grj-139	132	23	group	group	NOUN
grj-139	132	24	.	.	PUNCT
grj-139	133	1	this	this	DET
grj-139	133	2	pattern	pattern	NOUN
grj-139	133	3	held	hold	VERB
grj-139	133	4	true	true	ADJ
grj-139	133	5	across	across	ADP
grj-139	133	6	both	both	CCONJ
grj-139	133	7	f1	f1	NOUN
grj-139	133	8	and	and	CCONJ
grj-139	133	9	bc1	bc1	NOUN
grj-139	133	10	populations	population	NOUN
grj-139	133	11	.	.	PUNCT
grj-139	134	1	for	for	SCONJ
grj-139	134	2	each	each	DET
grj-139	134	3	linkage	linkage	NOUN
grj-139	134	4	group	group	NOUN
grj-139	134	5	formed	form	VERB
grj-139	134	6	,	,	PUNCT
grj-139	134	7	we	we	PRON
grj-139	134	8	used	use	VERB
grj-139	134	9	mappoly	mappoly	NOUN
grj-139	134	10	’s	’s	PART
grj-139	134	11	functions	function	NOUN
grj-139	134	12	,	,	PUNCT
grj-139	134	13	mds_mappoly	mds_mappoly	NOUN
grj-139	134	14	and	and	CCONJ
grj-139	134	15	est_rf_hmm_sequential	est_rf_hmm_sequential	ADJ
grj-139	134	16	to	to	PART
grj-139	134	17	carry	carry	VERB
grj-139	134	18	out	out	ADP
grj-139	134	19	de	de	ADP
grj-139	134	20	novo	novo	NOUN
grj-139	134	21	ordering	ordering	NOUN
grj-139	134	22	and	and	CCONJ
grj-139	134	23	phasing	phase	VERB
grj-139	134	24	to	to	PART
grj-139	134	25	obtain	obtain	VERB
grj-139	134	26	the	the	DET
grj-139	134	27	final	final	ADJ
grj-139	134	28	f1	f1	NOUN
grj-139	134	29	and	and	CCONJ
grj-139	134	30	bc1	bc1	NOUN
grj-139	134	31	maps	map	NOUN
grj-139	134	32	.	.	PUNCT
grj-139	135	1	from	from	ADP
grj-139	135	2	all	all	DET
grj-139	135	3	mapped	map	VERB
grj-139	135	4	markers	marker	NOUN
grj-139	135	5	,	,	PUNCT
grj-139	135	6	only	only	ADV
grj-139	135	7	2.55	2.55	NUM
grj-139	135	8	%	%	NOUN
grj-139	135	9	were	be	AUX
grj-139	135	10	assigned	assign	VERB
grj-139	135	11	to	to	ADP
grj-139	135	12	different	different	ADJ
grj-139	135	13	chromosomes	chromosome	NOUN
grj-139	135	14	in	in	ADP
grj-139	135	15	the	the	DET
grj-139	135	16	f1	f1	NOUN
grj-139	135	17	map	map	NOUN
grj-139	135	18	and	and	CCONJ
grj-139	135	19	0.97	0.97	NUM
grj-139	135	20	%	%	NOUN
grj-139	135	21	in	in	ADP
grj-139	135	22	the	the	DET
grj-139	135	23	bc1	bc1	NOUN
grj-139	135	24	map	map	NOUN
grj-139	135	25	.	.	PUNCT
grj-139	136	1	after	after	ADP
grj-139	136	2	constructing	construct	VERB
grj-139	136	3	individual	individual	ADJ
grj-139	136	4	maps	map	NOUN
grj-139	136	5	for	for	ADP
grj-139	136	6	the	the	DET
grj-139	136	7	f1	f1	NOUN
grj-139	136	8	and	and	CCONJ
grj-139	136	9	bc1	bc1	NOUN
grj-139	136	10	populations	population	NOUN
grj-139	136	11	,	,	PUNCT
grj-139	136	12	we	we	PRON
grj-139	136	13	merged	merge	VERB
grj-139	136	14	them	they	PRON
grj-139	136	15	using	use	VERB
grj-139	136	16	the	the	DET
grj-139	136	17	genome	genome	NOUN
grj-139	136	18	order	order	NOUN
grj-139	136	19	(	(	PUNCT
grj-139	136	20	figure	figure	NOUN
grj-139	136	21	3a	3a	NUM
grj-139	136	22	;	;	PUNCT
grj-139	136	23	supplemental	supplemental	ADJ
grj-139	136	24	figure	figure	NOUN
grj-139	136	25	1a	1a	NOUN
grj-139	136	26	)	)	PUNCT
grj-139	136	27	.	.	PUNCT
grj-139	137	1	the	the	DET
grj-139	137	2	mapped	map	VERB
grj-139	137	3	markers	marker	NOUN
grj-139	137	4	were	be	AUX
grj-139	137	5	all	all	ADV
grj-139	137	6	consistent	consistent	ADJ
grj-139	137	7	placed	place	VERB
grj-139	137	8	in	in	ADP
grj-139	137	9	the	the	DET
grj-139	137	10	two	two	NUM
grj-139	137	11	maps	map	NOUN
grj-139	137	12	,	,	PUNCT
grj-139	137	13	but	but	CCONJ
grj-139	137	14	a	a	DET
grj-139	137	15	few	few	ADJ
grj-139	137	16	markers	marker	NOUN
grj-139	137	17	were	be	AUX
grj-139	137	18	assigned	assign	VERB
grj-139	137	19	to	to	ADP
grj-139	137	20	different	different	ADJ
grj-139	137	21	linkage	linkage	NOUN
grj-139	137	22	groups	group	NOUN
grj-139	137	23	when	when	SCONJ
grj-139	137	24	comparing	compare	VERB
grj-139	137	25	the	the	DET
grj-139	137	26	linkage	linkage	NOUN
grj-139	137	27	and	and	CCONJ
grj-139	137	28	physical	physical	ADJ
grj-139	137	29	assembly	assembly	NOUN
grj-139	137	30	in	in	ADP
grj-139	137	31	both	both	DET
grj-139	137	32	maps	map	NOUN
grj-139	137	33	.	.	PUNCT
grj-139	138	1	these	these	DET
grj-139	138	2	markers	marker	NOUN
grj-139	138	3	were	be	AUX
grj-139	138	4	retained	retain	VERB
grj-139	138	5	in	in	ADP
grj-139	138	6	filtering	filter	VERB
grj-139	138	7	because	because	SCONJ
grj-139	138	8	they	they	PRON
grj-139	138	9	had	have	VERB
grj-139	138	10	reasonable	reasonable	ADJ
grj-139	138	11	mendelian	mendelian	ADJ
grj-139	138	12	segregation	segregation	NOUN
grj-139	138	13	behaviour	behaviour	NOUN
grj-139	138	14	and	and	CCONJ
grj-139	138	15	their	their	PRON
grj-139	138	16	association	association	NOUN
grj-139	138	17	with	with	ADP
grj-139	138	18	linkage	linkage	NOUN
grj-139	138	19	groups	group	NOUN
grj-139	138	20	that	that	PRON
grj-139	138	21	do	do	AUX
grj-139	138	22	not	not	PART
grj-139	138	23	correspond	correspond	VERB
grj-139	138	24	to	to	ADP
grj-139	138	25	their	their	PRON
grj-139	138	26	physical	physical	ADJ
grj-139	138	27	chromosome	chromosome	NOUN
grj-139	138	28	assignment	assignment	NOUN
grj-139	138	29	could	could	AUX
grj-139	138	30	indicate	indicate	VERB
grj-139	138	31	potential	potential	ADJ
grj-139	138	32	errors	error	NOUN
grj-139	138	33	in	in	ADP
grj-139	138	34	the	the	DET
grj-139	138	35	reference	reference	NOUN
grj-139	138	36	assembly	assembly	NOUN
grj-139	138	37	(	(	PUNCT
grj-139	138	38	figure	figure	NOUN
grj-139	138	39	3b	3b	NUM
grj-139	138	40	)	)	PUNCT
grj-139	138	41	.	.	PUNCT
grj-139	139	1	markers	marker	NOUN
grj-139	139	2	mapped	map	VERB
grj-139	139	3	out	out	ADP
grj-139	139	4	of	of	ADP
grj-139	139	5	their	their	PRON
grj-139	139	6	physical	physical	ADJ
grj-139	139	7	positions	position	NOUN
grj-139	139	8	were	be	AUX
grj-139	139	9	inserted	insert	VERB
grj-139	139	10	into	into	ADP
grj-139	139	11	the	the	DET
grj-139	139	12	genome	genome	NOUN
grj-139	139	13	-	-	PUNCT
grj-139	139	14	based	base	VERB
grj-139	139	15	map	map	NOUN
grj-139	139	16	using	use	VERB
grj-139	139	17	the	the	DET
grj-139	139	18	multidimensional	multidimensional	ADJ
grj-139	139	19	scaling	scaling	NOUN
grj-139	139	20	(	(	PUNCT
grj-139	139	21	mds	mds	NOUN
grj-139	139	22	)	)	PUNCT
grj-139	139	23	de	de	PROPN
grj-139	139	24	novo	novo	PROPN
grj-139	139	25	information	information	NOUN
grj-139	139	26	.	.	PUNCT
grj-139	140	1	we	we	PRON
grj-139	140	2	then	then	ADV
grj-139	140	3	reconstructed	reconstruct	VERB
grj-139	140	4	a	a	DET
grj-139	140	5	joint	joint	ADJ
grj-139	140	6	map	map	NOUN
grj-139	140	7	by	by	ADP
grj-139	140	8	employing	employ	VERB
grj-139	140	9	the	the	DET
grj-139	140	10	hidden	hide	VERB
grj-139	140	11	markov	markov	NOUN
grj-139	140	12	model	model	NOUN
grj-139	140	13	(	(	PUNCT
grj-139	140	14	hmm	hmm	INTJ
grj-139	140	15	)	)	PUNCT
grj-139	140	16	algorithm	algorithm	PROPN
grj-139	140	17	’s	’s	PART
grj-139	140	18	extension	extension	NOUN
grj-139	140	19	,	,	PUNCT
grj-139	140	20	as	as	ADP
grj-139	140	21	mollinari	mollinari	NOUN
grj-139	140	22	and	and	CCONJ
grj-139	140	23	garcia	garcia	PROPN
grj-139	140	24	(	(	PUNCT
grj-139	140	25	2019	2019	NUM
grj-139	140	26	)	)	PUNCT
grj-139	140	27	detailed	detail	VERB
grj-139	140	28	.	.	PUNCT
grj-139	141	1	the	the	DET
grj-139	141	2	implementation	implementation	NOUN
grj-139	141	3	for	for	ADP
grj-139	141	4	this	this	DET
grj-139	141	5	algorithm	algorithm	NOUN
grj-139	141	6	can	can	AUX
grj-139	141	7	be	be	AUX
grj-139	141	8	found	find	VERB
grj-139	141	9	in	in	ADP
grj-139	141	10	the	the	DET
grj-139	141	11	github	github	PROPN
grj-139	141	12	repository	repository	NOUN
grj-139	141	13	https://github.com/mmollina/highprechmm	https://github.com/mmollina/highprechmm	PROPN
grj-139	141	14	.	.	PUNCT
grj-139	142	1	finally	finally	ADV
grj-139	142	2	,	,	PUNCT
grj-139	142	3	haplotypes	haplotype	NOUN
grj-139	142	4	for	for	ADP
grj-139	142	5	all	all	DET
grj-139	142	6	individuals	individual	NOUN
grj-139	142	7	across	across	ADP
grj-139	142	8	both	both	CCONJ
grj-139	142	9	f1	f1	NOUN
grj-139	142	10	and	and	CCONJ
grj-139	142	11	bc1	bc1	NOUN
grj-139	142	12	populations	population	NOUN
grj-139	142	13	were	be	AUX
grj-139	142	14	reconstructed	reconstruct	VERB
grj-139	142	15	using	use	VERB
grj-139	142	16	the	the	DET
grj-139	142	17	same	same	ADJ
grj-139	142	18	algorithm	algorithm	NOUN
grj-139	142	19	(	(	PUNCT
grj-139	142	20	supplemental	supplemental	ADJ
grj-139	142	21	figure	figure	NOUN
grj-139	142	22	1b	1b	NUM
grj-139	142	23	)	)	PUNCT
grj-139	142	24	.	.	PUNCT
grj-139	143	1	conclusion	conclusion	NOUN
grj-139	143	2	this	this	DET
grj-139	143	3	panel	panel	NOUN
grj-139	143	4	is	be	AUX
grj-139	143	5	now	now	ADV
grj-139	143	6	publicly	publicly	ADV
grj-139	143	7	available	available	ADJ
grj-139	143	8	and	and	CCONJ
grj-139	143	9	open	open	ADJ
grj-139	143	10	for	for	ADP
grj-139	143	11	any	any	DET
grj-139	143	12	researcher	researcher	NOUN
grj-139	143	13	or	or	CCONJ
grj-139	143	14	breeder	breeder	NOUN
grj-139	143	15	to	to	PART
grj-139	143	16	order	order	VERB
grj-139	143	17	through	through	ADP
grj-139	143	18	dart	dart	NOUN
grj-139	143	19	(	(	PUNCT
grj-139	143	20	https://www.diversityarrays.com	https://www.diversityarrays.com	X
grj-139	143	21	)	)	PUNCT
grj-139	143	22	.	.	PUNCT
grj-139	144	1	researchers	researcher	NOUN
grj-139	144	2	interested	interested	ADJ
grj-139	144	3	in	in	ADP
grj-139	144	4	using	use	VERB
grj-139	144	5	the	the	DET
grj-139	144	6	panel	panel	NOUN
grj-139	144	7	and	and	CCONJ
grj-139	144	8	genotyping	genotyping	NOUN
grj-139	144	9	services	service	NOUN
grj-139	144	10	are	be	AUX
grj-139	144	11	encouraged	encourage	VERB
grj-139	144	12	to	to	PART
grj-139	144	13	contact	contact	VERB
grj-139	144	14	dart	dart	NOUN
grj-139	144	15	directly	directly	ADV
grj-139	144	16	for	for	ADP
grj-139	144	17	pricing	pricing	NOUN
grj-139	144	18	details	detail	NOUN
grj-139	144	19	.	.	PUNCT
grj-139	145	1	raw	raw	ADJ
grj-139	145	2	data	datum	NOUN
grj-139	145	3	in	in	ADP
grj-139	145	4	fastq	fastq	PROPN
grj-139	145	5	can	can	AUX
grj-139	145	6	be	be	AUX
grj-139	145	7	requested	request	VERB
grj-139	145	8	as	as	ADP
grj-139	145	9	can	can	AUX
grj-139	145	10	the	the	DET
grj-139	145	11	missing	miss	VERB
grj-139	145	12	allele	allele	NOUN
grj-139	145	13	discovery	discovery	NOUN
grj-139	145	14	file	file	NOUN
grj-139	145	15	(	(	PUNCT
grj-139	145	16	madc	madc	NOUN
grj-139	145	17	)	)	PUNCT
grj-139	145	18	that	that	PRON
grj-139	145	19	indicates	indicate	VERB
grj-139	145	20	the	the	DET
grj-139	145	21	read	read	ADJ
grj-139	145	22	depth	depth	NOUN
grj-139	145	23	of	of	ADP
grj-139	145	24	each	each	DET
grj-139	145	25	detected	detect	VERB
grj-139	145	26	haplotype	haplotype	NOUN
grj-139	145	27	in	in	ADP
grj-139	145	28	each	each	DET
grj-139	145	29	sample	sample	NOUN
grj-139	145	30	.	.	PUNCT
grj-139	146	1	the	the	DET
grj-139	146	2	panel	panel	NOUN
grj-139	146	3	and	and	CCONJ
grj-139	146	4	its	its	PRON
grj-139	146	5	resulting	result	VERB
grj-139	146	6	data	datum	NOUN
grj-139	146	7	are	be	AUX
grj-139	146	8	suitable	suitable	ADJ
grj-139	146	9	for	for	ADP
grj-139	146	10	marker	marker	NOUN
grj-139	146	11	-	-	PUNCT
grj-139	146	12	assisted	assist	VERB
grj-139	146	13	selection	selection	NOUN
grj-139	146	14	,	,	PUNCT
grj-139	146	15	reconstruction	reconstruction	NOUN
grj-139	146	16	of	of	ADP
grj-139	146	17	recombination	recombination	NOUN
grj-139	146	18	patterns	pattern	NOUN
grj-139	146	19	,	,	PUNCT
grj-139	146	20	allele	allele	NOUN
grj-139	146	21	dosage	dosage	NOUN
grj-139	146	22	estimation	estimation	NOUN
grj-139	146	23	,	,	PUNCT
grj-139	146	24	and	and	CCONJ
grj-139	146	25	parental	parental	ADJ
grj-139	146	26	confirmation	confirmation	NOUN
grj-139	146	27	in	in	ADP
grj-139	146	28	north	north	PROPN
grj-139	146	29	american	american	ADJ
grj-139	146	30	cultivated	cultivate	VERB
grj-139	146	31	alfalfa	alfalfa	NOUN
grj-139	146	32	,	,	PUNCT
grj-139	146	33	with	with	ADP
grj-139	146	34	some	some	DET
grj-139	146	35	limited	limited	ADJ
grj-139	146	36	application	application	NOUN
grj-139	146	37	in	in	ADP
grj-139	146	38	other	other	ADJ
grj-139	146	39	medicago	medicago	PROPN
grj-139	146	40	species	specie	NOUN
grj-139	146	41	.	.	PUNCT
grj-139	147	1	the	the	DET
grj-139	147	2	efficacy	efficacy	NOUN
grj-139	147	3	of	of	ADP
grj-139	147	4	the	the	DET
grj-139	147	5	panel	panel	NOUN
grj-139	147	6	on	on	ADP
grj-139	147	7	breeding	breed	VERB
grj-139	147	8	materials	material	NOUN
grj-139	147	9	outside	outside	ADP
grj-139	147	10	of	of	ADP
grj-139	147	11	north	north	PROPN
grj-139	147	12	america	america	PROPN
grj-139	147	13	has	have	AUX
grj-139	147	14	not	not	PART
grj-139	147	15	been	be	AUX
grj-139	147	16	tested	test	VERB
grj-139	147	17	,	,	PUNCT
grj-139	147	18	nor	nor	CCONJ
grj-139	147	19	has	have	VERB
grj-139	147	20	its	its	PRON
grj-139	147	21	efficacy	efficacy	NOUN
grj-139	147	22	in	in	ADP
grj-139	147	23	gwas	gwas	PROPN
grj-139	147	24	.	.	PUNCT
grj-139	148	1	single	single	ADJ
grj-139	148	2	plant	plant	NOUN
grj-139	148	3	samples	sample	NOUN
grj-139	148	4	were	be	AUX
grj-139	148	5	used	use	VERB
grj-139	148	6	to	to	PART
grj-139	148	7	create	create	VERB
grj-139	148	8	and	and	CCONJ
grj-139	148	9	test	test	VERB
grj-139	148	10	the	the	DET
grj-139	148	11	panel	panel	NOUN
grj-139	148	12	.	.	PUNCT
grj-139	149	1	subsequent	subsequent	ADJ
grj-139	149	2	testing	testing	NOUN
grj-139	149	3	on	on	ADP
grj-139	149	4	samples	sample	NOUN
grj-139	149	5	that	that	PRON
grj-139	149	6	are	be	AUX
grj-139	149	7	genotyped	genotype	VERB
grj-139	149	8	individually	individually	ADV
grj-139	149	9	and	and	CCONJ
grj-139	149	10	in	in	ADP
grj-139	149	11	tissue	tissue	NOUN
grj-139	149	12	or	or	CCONJ
grj-139	149	13	dna	dna	NOUN
grj-139	149	14	bulks	bulk	NOUN
grj-139	149	15	(	(	PUNCT
grj-139	149	16	dna	dna	PROPN
grj-139	149	17	bulks	bulk	VERB
grj-139	149	18	up	up	ADP
grj-139	149	19	to	to	PART
grj-139	149	20	30	30	NUM
grj-139	149	21	individuals	individual	NOUN
grj-139	149	22	per	per	ADP
grj-139	149	23	population	population	NOUN
grj-139	149	24	)	)	PUNCT
grj-139	149	25	have	have	AUX
grj-139	149	26	produced	produce	VERB
grj-139	149	27	the	the	DET
grj-139	149	28	same	same	ADJ
grj-139	149	29	allele	allele	NOUN
grj-139	149	30	frequency	frequency	NOUN
grj-139	149	31	ratios	ratio	NOUN
grj-139	149	32	in	in	ADP
grj-139	149	33	both	both	DET
grj-139	149	34	sample	sample	NOUN
grj-139	149	35	types	type	NOUN
grj-139	149	36	but	but	CCONJ
grj-139	149	37	higher	high	ADJ
grj-139	149	38	read	read	NOUN
grj-139	149	39	depth	depth	NOUN
grj-139	149	40	in	in	ADP
grj-139	149	41	pools	pool	NOUN
grj-139	149	42	(	(	PUNCT
grj-139	149	43	esteban	esteban	PROPN
grj-139	149	44	rios	rios	PROPN
grj-139	149	45	,	,	PUNCT
grj-139	149	46	personal	personal	ADJ
grj-139	149	47	communication	communication	NOUN
grj-139	149	48	)	)	PUNCT
grj-139	149	49	.	.	PUNCT
grj-139	150	1	more	more	ADJ
grj-139	150	2	testing	testing	NOUN
grj-139	150	3	is	be	AUX
grj-139	150	4	needed	need	VERB
grj-139	150	5	to	to	PART
grj-139	150	6	determine	determine	VERB
grj-139	150	7	the	the	DET
grj-139	150	8	most	most	ADV
grj-139	150	9	efficient	efficient	ADJ
grj-139	150	10	number	number	NOUN
grj-139	150	11	of	of	ADP
grj-139	150	12	samples	sample	NOUN
grj-139	150	13	to	to	PART
grj-139	150	14	pool	pool	VERB
grj-139	150	15	to	to	PART
grj-139	150	16	achieve	achieve	VERB
grj-139	150	17	population	population	NOUN
grj-139	150	18	-	-	PUNCT
grj-139	150	19	level	level	NOUN
grj-139	150	20	allele	allele	NOUN
grj-139	150	21	frequencies	frequency	NOUN
grj-139	150	22	with	with	ADP
grj-139	150	23	minimal	minimal	ADJ
grj-139	150	24	human	human	ADJ
grj-139	150	25	labour	labour	NOUN
grj-139	150	26	and	and	CCONJ
grj-139	150	27	monetary	monetary	ADJ
grj-139	150	28	costs	cost	NOUN
grj-139	150	29	.	.	PUNCT
grj-139	151	1	the	the	DET
grj-139	151	2	dartag	dartag	PROPN
grj-139	151	3	assay	assay	PROPN
grj-139	151	4	can	can	AUX
grj-139	151	5	be	be	AUX
grj-139	151	6	processed	process	VERB
grj-139	151	7	from	from	ADP
grj-139	151	8	gdna	gdna	ADV
grj-139	151	9	or	or	CCONJ
grj-139	151	10	from	from	ADP
grj-139	151	11	tissue	tissue	NOUN
grj-139	151	12	to	to	ADP
grj-139	151	13	genotyping	genotype	VERB
grj-139	151	14	data	data	NOUN
grj-139	151	15	extraction	extraction	NOUN
grj-139	151	16	in	in	ADP
grj-139	151	17	a	a	DET
grj-139	151	18	three	three	NUM
grj-139	151	19	-	-	PUNCT
grj-139	151	20	week	week	NOUN
grj-139	151	21	turnaround	turnaround	NOUN
grj-139	151	22	time	time	NOUN
grj-139	151	23	.	.	PUNCT
grj-139	152	1	the	the	DET
grj-139	152	2	genotyping	genotype	VERB
grj-139	152	3	data	datum	NOUN
grj-139	152	4	report	report	NOUN
grj-139	152	5	comprises	comprise	VERB
grj-139	152	6	allele	allele	NOUN
grj-139	152	7	dose	dose	NOUN
grj-139	152	8	calls	call	NOUN
grj-139	152	9	and	and	CCONJ
grj-139	152	10	raw	raw	ADJ
grj-139	152	11	data	datum	NOUN
grj-139	152	12	with	with	ADP
grj-139	152	13	custom	custom	NOUN
grj-139	152	14	report	report	NOUN
grj-139	152	15	formats	format	NOUN
grj-139	152	16	available	available	ADJ
grj-139	152	17	upon	upon	SCONJ
grj-139	152	18	request	request	NOUN
grj-139	152	19	.	.	PUNCT
grj-139	153	1	one	one	NUM
grj-139	153	2	benefit	benefit	NOUN
grj-139	153	3	that	that	PRON
grj-139	153	4	dartag	dartag	NOUN
grj-139	153	5	has	have	AUX
grj-139	153	6	over	over	ADP
grj-139	153	7	fixed	fix	VERB
grj-139	153	8	array	array	NOUN
grj-139	153	9	platforms	platform	NOUN
grj-139	153	10	is	be	AUX
grj-139	153	11	the	the	DET
grj-139	153	12	ability	ability	NOUN
grj-139	153	13	to	to	PART
grj-139	153	14	update	update	VERB
grj-139	153	15	and	and	CCONJ
grj-139	153	16	improve	improve	VERB
grj-139	153	17	the	the	DET
grj-139	153	18	panel	panel	NOUN
grj-139	153	19	as	as	SCONJ
grj-139	153	20	required	require	VERB
grj-139	153	21	over	over	ADP
grj-139	153	22	time	time	NOUN
grj-139	153	23	.	.	PUNCT
grj-139	154	1	the	the	DET
grj-139	154	2	panel	panel	NOUN
grj-139	154	3	is	be	AUX
grj-139	154	4	a	a	DET
grj-139	154	5	pool	pool	NOUN
grj-139	154	6	of	of	ADP
grj-139	154	7	3,000	3,000	NUM
grj-139	154	8	oligos	oligo	NOUN
grj-139	154	9	,	,	PUNCT
grj-139	154	10	one	one	NUM
grj-139	154	11	per	per	ADP
grj-139	154	12	locus	locus	NOUN
grj-139	154	13	,	,	PUNCT
grj-139	154	14	which	which	PRON
grj-139	154	15	is	be	AUX
grj-139	154	16	used	use	VERB
grj-139	154	17	to	to	PART
grj-139	154	18	generate	generate	VERB
grj-139	154	19	the	the	DET
grj-139	154	20	sequencing	sequencing	NOUN
grj-139	154	21	libraries	library	NOUN
grj-139	154	22	from	from	ADP
grj-139	154	23	the	the	DET
grj-139	154	24	assayed	assayed	ADJ
grj-139	154	25	material	material	NOUN
grj-139	154	26	.	.	PUNCT
grj-139	155	1	because	because	SCONJ
grj-139	155	2	the	the	DET
grj-139	155	3	pool	pool	NOUN
grj-139	155	4	is	be	AUX
grj-139	155	5	created	create	VERB
grj-139	155	6	from	from	ADP
grj-139	155	7	individual	individual	ADJ
grj-139	155	8	oligo	oligo	ADJ
grj-139	155	9	stocks	stock	NOUN
grj-139	155	10	,	,	PUNCT
grj-139	155	11	the	the	DET
grj-139	155	12	removal	removal	NOUN
grj-139	155	13	of	of	ADP
grj-139	155	14	suboptimal	suboptimal	ADJ
grj-139	155	15	loci	locus	NOUN
grj-139	155	16	or	or	CCONJ
grj-139	155	17	the	the	DET
grj-139	155	18	addition	addition	NOUN
grj-139	155	19	of	of	ADP
grj-139	155	20	new	new	ADJ
grj-139	155	21	loci	locus	NOUN
grj-139	155	22	can	can	AUX
grj-139	155	23	be	be	AUX
grj-139	155	24	easily	easily	ADV
grj-139	155	25	done	do	VERB
grj-139	155	26	by	by	ADP
grj-139	155	27	creating	create	VERB
grj-139	155	28	a	a	DET
grj-139	155	29	new	new	ADJ
grj-139	155	30	pool	pool	NOUN
grj-139	155	31	.	.	PUNCT
grj-139	156	1	to	to	PART
grj-139	156	2	determine	determine	VERB
grj-139	156	3	which	which	DET
grj-139	156	4	loci	loci	NOUN
grj-139	156	5	should	should	AUX
grj-139	156	6	be	be	AUX
grj-139	156	7	considered	consider	VERB
grj-139	156	8	for	for	ADP
grj-139	156	9	removal	removal	NOUN
grj-139	156	10	,	,	PUNCT
grj-139	156	11	extensive	extensive	ADJ
grj-139	156	12	genotyping	genotyping	NOUN
grj-139	156	13	(	(	PUNCT
grj-139	156	14	>	>	NOUN
grj-139	156	15	10,000	10,000	NUM
grj-139	156	16	samples	sample	NOUN
grj-139	156	17	)	)	PUNCT
grj-139	156	18	is	be	AUX
grj-139	156	19	underway	underway	ADJ
grj-139	156	20	to	to	PART
grj-139	156	21	identify	identify	VERB
grj-139	156	22	those	those	DET
grj-139	156	23	loci	locus	NOUN
grj-139	156	24	that	that	PRON
grj-139	156	25	consistently	consistently	ADV
grj-139	156	26	underperform	underperform	VERB
grj-139	156	27	or	or	CCONJ
grj-139	156	28	fail	fail	VERB
grj-139	156	29	and	and	CCONJ
grj-139	156	30	flag	flag	VERB
grj-139	156	31	them	they	PRON
grj-139	156	32	for	for	ADP
grj-139	156	33	removal	removal	NOUN
grj-139	156	34	.	.	PUNCT
grj-139	157	1	independently	independently	ADV
grj-139	157	2	,	,	PUNCT
grj-139	157	3	as	as	SCONJ
grj-139	157	4	new	new	ADJ
grj-139	157	5	significant	significant	ADJ
grj-139	157	6	qtl	qtl	PROPN
grj-139	157	7	markers	marker	NOUN
grj-139	157	8	and/or	and/or	CCONJ
grj-139	157	9	markers	marker	VERB
grj-139	157	10	specific	specific	ADJ
grj-139	157	11	to	to	ADP
grj-139	157	12	other	other	ADJ
grj-139	157	13	germplasm	germplasm	NOUN
grj-139	157	14	are	be	AUX
grj-139	157	15	detected	detect	VERB
grj-139	157	16	,	,	PUNCT
grj-139	157	17	they	they	PRON
grj-139	157	18	can	can	AUX
grj-139	157	19	be	be	AUX
grj-139	157	20	targeted	target	VERB
grj-139	157	21	for	for	ADP
grj-139	157	22	inclusion	inclusion	NOUN
grj-139	157	23	in	in	ADP
grj-139	157	24	the	the	DET
grj-139	157	25	original	original	ADJ
grj-139	157	26	pool	pool	NOUN
grj-139	157	27	in	in	ADP
grj-139	157	28	the	the	DET
grj-139	157	29	next	next	ADJ
grj-139	157	30	version(s	version(s	NOUN
grj-139	157	31	)	)	PUNCT
grj-139	157	32	of	of	ADP
grj-139	157	33	the	the	DET
grj-139	157	34	panel	panel	NOUN
grj-139	157	35	.	.	PUNCT
grj-139	158	1	dart	dart	NOUN
grj-139	158	2	offers	offer	VERB
grj-139	158	3	re	re	VERB
grj-139	158	4	-	-	ADJ
grj-139	158	5	pooling	pool	VERB
grj-139	158	6	services	service	NOUN
grj-139	158	7	once	once	ADV
grj-139	158	8	per	per	ADP
grj-139	158	9	year	year	NOUN
grj-139	158	10	at	at	ADP
grj-139	158	11	low	low	ADJ
grj-139	158	12	or	or	CCONJ
grj-139	158	13	no	no	PRON
grj-139	158	14	cost	cost	NOUN
grj-139	158	15	,	,	PUNCT
grj-139	158	16	but	but	CCONJ
grj-139	158	17	more	more	ADV
grj-139	158	18	frequent	frequent	ADJ
grj-139	158	19	requests	request	NOUN
grj-139	158	20	could	could	AUX
grj-139	158	21	result	result	VERB
grj-139	158	22	in	in	ADP
grj-139	158	23	labour	labour	ADJ
grj-139	158	24	surcharges	surcharge	NOUN
grj-139	158	25	being	be	AUX
grj-139	158	26	applied	apply	VERB
grj-139	158	27	(	(	PUNCT
grj-139	158	28	andrzej	andrzej	PROPN
grj-139	158	29	kilian	kilian	PROPN
grj-139	158	30	,	,	PUNCT
grj-139	158	31	personal	personal	ADJ
grj-139	158	32	communication	communication	NOUN
grj-139	158	33	)	)	PUNCT
grj-139	158	34	.	.	PUNCT
grj-139	159	1	researchers	researcher	NOUN
grj-139	159	2	interested	interested	ADJ
grj-139	159	3	in	in	ADP
grj-139	159	4	initiating	initiate	VERB
grj-139	159	5	projects	project	NOUN
grj-139	159	6	with	with	ADP
grj-139	159	7	dart	dart	NOUN
grj-139	159	8	are	be	AUX
grj-139	159	9	encouraged	encourage	VERB
grj-139	159	10	to	to	PART
grj-139	159	11	contact	contact	VERB
grj-139	159	12	dart	dart	NOUN
grj-139	159	13	directly	directly	ADV
grj-139	159	14	for	for	ADP
grj-139	159	15	consultation	consultation	NOUN
grj-139	159	16	.	.	PUNCT
grj-139	160	1	another	another	DET
grj-139	160	2	benefit	benefit	NOUN
grj-139	160	3	of	of	ADP
grj-139	160	4	the	the	DET
grj-139	160	5	deep	deep	ADJ
grj-139	160	6	testing	testing	NOUN
grj-139	160	7	underway	underway	ADV
grj-139	160	8	is	be	AUX
grj-139	160	9	the	the	DET
grj-139	160	10	ability	ability	NOUN
grj-139	160	11	to	to	PART
grj-139	160	12	detect	detect	VERB
grj-139	160	13	and	and	CCONJ
grj-139	160	14	catalogue	catalogue	NOUN
grj-139	160	15	all	all	DET
grj-139	160	16	the	the	DET
grj-139	160	17	microhaplotypes	microhaplotype	NOUN
grj-139	160	18	into	into	ADP
grj-139	160	19	a	a	DET
grj-139	160	20	fixed	fix	VERB
grj-139	160	21	allele	allele	NOUN
grj-139	160	22	database	database	NOUN
grj-139	160	23	,	,	PUNCT
grj-139	160	24	which	which	PRON
grj-139	160	25	will	will	AUX
grj-139	160	26	improve	improve	VERB
grj-139	160	27	combining	combine	VERB
grj-139	160	28	data	datum	NOUN
grj-139	160	29	sets	set	NOUN
grj-139	160	30	across	across	ADP
grj-139	160	31	genotyping	genotype	VERB
grj-139	160	32	projects	project	NOUN
grj-139	160	33	(	(	PUNCT
grj-139	160	34	manuscript	manuscript	NOUN
grj-139	160	35	in	in	ADP
grj-139	160	36	preparation	preparation	NOUN
grj-139	160	37	)	)	PUNCT
grj-139	160	38	.	.	PUNCT
grj-139	161	1	if	if	SCONJ
grj-139	161	2	after	after	ADP
grj-139	161	3	deep	deep	ADJ
grj-139	161	4	testing	testing	NOUN
grj-139	161	5	it	it	PRON
grj-139	161	6	is	be	AUX
grj-139	161	7	clear	clear	ADJ
grj-139	161	8	that	that	SCONJ
grj-139	161	9	there	there	PRON
grj-139	161	10	are	be	VERB
grj-139	161	11	too	too	ADV
grj-139	161	12	few	few	ADJ
grj-139	161	13	markers	marker	NOUN
grj-139	161	14	for	for	ADP
grj-139	161	15	gwas	gwas	NOUN
grj-139	161	16	for	for	ADP
grj-139	161	17	given	give	VERB
grj-139	161	18	traits	trait	NOUN
grj-139	161	19	of	of	ADP
grj-139	161	20	interest	interest	NOUN
grj-139	161	21	,	,	PUNCT
grj-139	161	22	additional	additional	ADJ
grj-139	161	23	panels	panel	NOUN
grj-139	161	24	can	can	AUX
grj-139	161	25	be	be	AUX
grj-139	161	26	made	make	VERB
grj-139	161	27	to	to	PART
grj-139	161	28	complement	complement	VERB
grj-139	161	29	this	this	DET
grj-139	161	30	panel	panel	NOUN
grj-139	161	31	.	.	PUNCT
grj-139	162	1	the	the	DET
grj-139	162	2	other	other	ADJ
grj-139	162	3	option	option	NOUN
grj-139	162	4	is	be	AUX
grj-139	162	5	to	to	PART
grj-139	162	6	add	add	VERB
grj-139	162	7	the	the	DET
grj-139	162	8	required	require	VERB
grj-139	162	9	loci	loci	NOUN
grj-139	162	10	to	to	ADP
grj-139	162	11	the	the	DET
grj-139	162	12	existing	exist	VERB
grj-139	162	13	panel	panel	NOUN
grj-139	162	14	up	up	ADP
grj-139	162	15	to	to	ADP
grj-139	162	16	the	the	DET
grj-139	162	17	technical	technical	ADJ
grj-139	162	18	limit	limit	NOUN
grj-139	162	19	of	of	ADP
grj-139	162	20	7k	7k	NOUN
grj-139	162	21	,	,	PUNCT
grj-139	162	22	which	which	PRON
grj-139	162	23	is	be	AUX
grj-139	162	24	a	a	DET
grj-139	162	25	more	more	ADV
grj-139	162	26	cost	cost	NOUN
grj-139	162	27	-	-	PUNCT
grj-139	162	28	effective	effective	ADJ
grj-139	162	29	option	option	NOUN
grj-139	162	30	for	for	ADP
grj-139	162	31	the	the	DET
grj-139	162	32	routine	routine	ADJ
grj-139	162	33	genotyping	genotyping	NOUN
grj-139	162	34	service	service	NOUN
grj-139	162	35	with	with	ADP
grj-139	162	36	scalability	scalability	NOUN
grj-139	162	37	.	.	PUNCT
grj-139	163	1	we	we	PRON
grj-139	163	2	choose	choose	VERB
grj-139	163	3	to	to	PART
grj-139	163	4	create	create	VERB
grj-139	163	5	a	a	DET
grj-139	163	6	panel	panel	NOUN
grj-139	163	7	of	of	ADP
grj-139	163	8	3,000	3,000	NUM
grj-139	163	9	loci	locus	NOUN
grj-139	163	10	due	due	ADJ
grj-139	163	11	to	to	ADP
grj-139	163	12	cost	cost	NOUN
grj-139	163	13	and	and	CCONJ
grj-139	163	14	technical	technical	ADJ
grj-139	163	15	reasons	reason	NOUN
grj-139	163	16	,	,	PUNCT
grj-139	163	17	but	but	CCONJ
grj-139	163	18	smaller	small	ADJ
grj-139	163	19	complementary	complementary	ADJ
grj-139	163	20	panels	panel	NOUN
grj-139	163	21	can	can	AUX
grj-139	163	22	be	be	AUX
grj-139	163	23	made	make	VERB
grj-139	163	24	at	at	ADP
grj-139	163	25	lower	low	ADJ
grj-139	163	26	up	up	ADP
grj-139	163	27	-	-	PUNCT
grj-139	163	28	front	front	NOUN
grj-139	163	29	and	and	CCONJ
grj-139	163	30	downstream	downstream	ADJ
grj-139	163	31	usage	usage	NOUN
grj-139	163	32	costs	cost	NOUN
grj-139	163	33	.	.	PUNCT
grj-139	164	1	the	the	DET
grj-139	164	2	addition	addition	NOUN
grj-139	164	3	of	of	ADP
grj-139	164	4	a	a	DET
grj-139	164	5	complementary	complementary	ADJ
grj-139	164	6	3k	3k	NUM
grj-139	164	7	panel	panel	NOUN
grj-139	164	8	would	would	AUX
grj-139	164	9	nearly	nearly	ADV
grj-139	164	10	double	double	VERB
grj-139	164	11	the	the	DET
grj-139	164	12	cost	cost	NOUN
grj-139	164	13	of	of	ADP
grj-139	164	14	genotyping	genotype	VERB
grj-139	164	15	per	per	ADP
grj-139	164	16	sample	sample	NOUN
grj-139	164	17	but	but	CCONJ
grj-139	164	18	would	would	AUX
grj-139	164	19	result	result	VERB
grj-139	164	20	in	in	ADP
grj-139	164	21	more	more	ADJ
grj-139	164	22	granular	granular	ADJ
grj-139	164	23	genotyping	genotyping	NOUN
grj-139	164	24	data	datum	NOUN
grj-139	164	25	.	.	PUNCT
grj-139	165	1	data	datum	NOUN
grj-139	165	2	availability	availability	NOUN
grj-139	165	3	statement	statement	NOUN
grj-139	165	4	the	the	DET
grj-139	165	5	fastq	fastq	ADJ
grj-139	165	6	files	file	NOUN
grj-139	165	7	from	from	ADP
grj-139	165	8	the	the	DET
grj-139	165	9	whole	whole	ADJ
grj-139	165	10	-	-	PUNCT
grj-139	165	11	genome	genome	NOUN
grj-139	165	12	skim	skim	NOUN
grj-139	165	13	sequencing	sequence	VERB
grj-139	165	14	for	for	ADP
grj-139	165	15	the	the	DET
grj-139	165	16	40	40	NUM
grj-139	165	17	medicago	medicago	PROPN
grj-139	165	18	sativa	sativa	NOUN
grj-139	165	19	accessions	accession	NOUN
grj-139	165	20	used	use	VERB
grj-139	165	21	for	for	ADP
grj-139	165	22	identifying	identify	VERB
grj-139	165	23	the	the	DET
grj-139	165	24	candidate	candidate	NOUN
grj-139	165	25	snp	snp	ADJ
grj-139	165	26	variants	variant	NOUN
grj-139	165	27	are	be	AUX
grj-139	165	28	housed	house	VERB
grj-139	165	29	in	in	ADP
grj-139	165	30	the	the	DET
grj-139	165	31	ncbi	ncbi	PROPN
grj-139	165	32	short	short	PROPN
grj-139	165	33	read	read	VERB
grj-139	165	34	archive	archive	NOUN
grj-139	165	35	under	under	ADP
grj-139	165	36	the	the	DET
grj-139	165	37	bioproject	bioproject	NOUN
grj-139	165	38	i	i	PROPN
grj-139	165	39	d	d	PROPN
grj-139	165	40	prjna1014379	prjna1014379	PROPN
grj-139	165	41	.	.	PUNCT
grj-139	166	1	the	the	DET
grj-139	166	2	targeted	target	VERB
grj-139	166	3	regions	region	NOUN
grj-139	166	4	used	use	VERB
grj-139	166	5	to	to	PART
grj-139	166	6	create	create	VERB
grj-139	166	7	the	the	DET
grj-139	166	8	3k	3k	NUM
grj-139	166	9	dartag	dartag	NOUN
grj-139	166	10	markers	marker	NOUN
grj-139	166	11	and	and	CCONJ
grj-139	166	12	the	the	DET
grj-139	166	13	haplotypes	haplotype	NOUN
grj-139	166	14	detected	detect	VERB
grj-139	166	15	as	as	ADP
grj-139	166	16	of	of	ADP
grj-139	166	17	31	31	NUM
grj-139	166	18	may	may	PROPN
grj-139	166	19	2023	2023	NUM
grj-139	166	20	(	(	PUNCT
grj-139	166	21	v17	v17	NOUN
grj-139	166	22	)	)	PUNCT
grj-139	166	23	are	be	AUX
grj-139	166	24	available	available	ADJ
grj-139	166	25	on	on	ADP
grj-139	166	26	dryad	dryad	NOUN
grj-139	166	27	(	(	PUNCT
grj-139	166	28	https://datadryad.org/stash/share/wjen32dfl94eoymoem00pjti6mkulipbtatsgbwjyou	https://datadryad.org/stash/share/wjen32dfl94eoymoem00pjti6mkulipbtatsgbwjyou	NOUN
grj-139	166	29	)	)	PUNCT
grj-139	166	30	.	.	PUNCT
grj-139	167	1	the	the	DET
grj-139	167	2	code	code	NOUN
grj-139	167	3	and	and	CCONJ
grj-139	167	4	data	datum	NOUN
grj-139	167	5	for	for	ADP
grj-139	167	6	construction	construction	NOUN
grj-139	167	7	of	of	ADP
grj-139	167	8	the	the	DET
grj-139	167	9	f1	f1	NOUN
grj-139	167	10	,	,	PUNCT
grj-139	167	11	bc1	bc1	NOUN
grj-139	167	12	and	and	CCONJ
grj-139	167	13	joint	joint	ADJ
grj-139	167	14	maps	map	NOUN
grj-139	167	15	in	in	ADP
grj-139	167	16	mappoly	mappoly	NOUN
grj-139	167	17	are	be	AUX
grj-139	167	18	available	available	ADJ
grj-139	167	19	in	in	ADP
grj-139	167	20	our	our	PRON
grj-139	167	21	github	github	NOUN
grj-139	167	22	repository	repository	NOUN
grj-139	167	23	for	for	ADP
grj-139	167	24	those	those	PRON
grj-139	167	25	interested	interested	ADJ
grj-139	167	26	in	in	ADP
grj-139	167	27	reproducing	reproduce	VERB
grj-139	167	28	our	our	PRON
grj-139	167	29	analysis	analysis	NOUN
grj-139	167	30	(	(	PUNCT
grj-139	167	31	https://github.com/breeding-insight/alfalfa_dartag_panel_paper.git	https://github.com/breeding-insight/alfalfa_dartag_panel_paper.git	PROPN
grj-139	167	32	.	.	PUNCT
grj-139	168	1	acknowledgments	acknowledgment	NOUN
grj-139	168	2	breeding	breed	VERB
grj-139	168	3	insight	insight	NOUN
grj-139	168	4	is	be	AUX
grj-139	168	5	acknowledged	acknowledge	VERB
grj-139	168	6	for	for	ADP
grj-139	168	7	project	project	NOUN
grj-139	168	8	design	design	NOUN
grj-139	168	9	,	,	PUNCT
grj-139	168	10	marker	marker	NOUN
grj-139	168	11	development	development	NOUN
grj-139	168	12	,	,	PUNCT
grj-139	168	13	curation	curation	NOUN
grj-139	168	14	and	and	CCONJ
grj-139	168	15	data	datum	NOUN
grj-139	168	16	processing	processing	NOUN
grj-139	168	17	.	.	PUNCT
grj-139	169	1	diversity	diversity	NOUN
grj-139	169	2	arrays	array	VERB
grj-139	169	3	technology	technology	NOUN
grj-139	169	4	created	create	VERB
grj-139	169	5	the	the	DET
grj-139	169	6	oligo	oligo	ADJ
grj-139	169	7	array	array	NOUN
grj-139	169	8	,	,	PUNCT
grj-139	169	9	provided	provide	VERB
grj-139	169	10	sequencing	sequence	VERB
grj-139	169	11	services	service	NOUN
grj-139	169	12	and	and	CCONJ
grj-139	169	13	contributed	contribute	VERB
grj-139	169	14	to	to	ADP
grj-139	169	15	the	the	DET
grj-139	169	16	manuscript	manuscript	NOUN
grj-139	169	17	.	.	PUNCT
grj-139	170	1	we	we	PRON
grj-139	170	2	thank	thank	VERB
grj-139	170	3	s&w	s&w	PROPN
grj-139	170	4	seed	seed	NOUN
grj-139	170	5	company	company	NOUN
grj-139	170	6	,	,	PUNCT
grj-139	170	7	legacy	legacy	NOUN
grj-139	170	8	seeds	seed	NOUN
grj-139	170	9	,	,	PUNCT
grj-139	170	10	debby	debby	NOUN
grj-139	170	11	samac	samac	PROPN
grj-139	170	12	,	,	PUNCT
grj-139	170	13	brian	brian	PROPN
grj-139	170	14	irish	irish	PROPN
grj-139	170	15	,	,	PUNCT
grj-139	170	16	michael	michael	PROPN
grj-139	170	17	peel	peel	PROPN
grj-139	170	18	,	,	PUNCT
grj-139	170	19	long	long	ADV
grj-139	170	20	-	-	PUNCT
grj-139	170	21	xi	xi	NUM
grj-139	170	22	yu	yu	PROPN
grj-139	170	23	,	,	PUNCT
grj-139	170	24	heathcliffe	heathcliffe	VERB
grj-139	170	25	riday	riday	PROPN
grj-139	170	26	,	,	PUNCT
grj-139	170	27	nevin	nevin	PROPN
grj-139	170	28	young	young	PROPN
grj-139	170	29	,	,	PUNCT
grj-139	170	30	esteban	esteban	PROPN
grj-139	170	31	rios	rio	NOUN
grj-139	170	32	,	,	PUNCT
grj-139	170	33	ian	ian	PROPN
grj-139	170	34	ray	ray	PROPN
grj-139	170	35	,	,	PUNCT
grj-139	170	36	ali	ali	PROPN
grj-139	170	37	missaoui	missaoui	PROPN
grj-139	170	38	and	and	CCONJ
grj-139	170	39	don	don	PROPN
grj-139	170	40	viands	viand	NOUN
grj-139	170	41	for	for	ADP
grj-139	170	42	providing	provide	VERB
grj-139	170	43	germplasm	germplasm	NOUN
grj-139	170	44	and	and	CCONJ
grj-139	170	45	sharon	sharon	PROPN
grj-139	170	46	mitchell	mitchell	PROPN
grj-139	170	47	for	for	ADP
grj-139	170	48	manuscript	manuscript	PROPN
grj-139	170	49	review	review	NOUN
grj-139	170	50	.	.	PUNCT
grj-139	171	1	breeding	breeding	NOUN
grj-139	171	2	insight	insight	NOUN
grj-139	171	3	was	be	AUX
grj-139	171	4	funded	fund	VERB
grj-139	171	5	for	for	ADP
grj-139	171	6	this	this	DET
grj-139	171	7	work	work	NOUN
grj-139	171	8	through	through	ADP
grj-139	171	9	a	a	DET
grj-139	171	10	cooperative	cooperative	ADJ
grj-139	171	11	agreement	agreement	NOUN
grj-139	171	12	between	between	ADP
grj-139	171	13	usda	usda	NOUN
grj-139	171	14	-	-	PUNCT
grj-139	171	15	ars	ar	NOUN
grj-139	171	16	and	and	CCONJ
grj-139	171	17	cornell	cornell	PROPN
grj-139	171	18	(	(	PUNCT
grj-139	171	19	project	project	NOUN
grj-139	171	20	number	number	NOUN
grj-139	171	21	:	:	PUNCT
grj-139	171	22	8062	8062	NUM
grj-139	171	23	-	-	SYM
grj-139	171	24	21000	21000	NUM
grj-139	171	25	-	-	PUNCT
grj-139	171	26	043	043	NUM
grj-139	171	27	-	-	PUNCT
grj-139	171	28	004	004	NUM
grj-139	171	29	-	-	PUNCT
grj-139	171	30	a	a	NOUN
grj-139	171	31	)	)	PUNCT
grj-139	171	32	.	.	PUNCT
grj-139	172	1	marcelo	marcelo	PROPN
grj-139	172	2	mollinari	mollinari	PROPN
grj-139	172	3	was	be	AUX
grj-139	172	4	funded	fund	VERB
grj-139	172	5	by	by	ADP
grj-139	172	6	a	a	DET
grj-139	172	7	usda	usda	PROPN
grj-139	172	8	nifa	nifa	PROPN
grj-139	172	9	-	-	PUNCT
grj-139	172	10	awarded	award	VERB
grj-139	172	11	afri	afri	PROPN
grj-139	172	12	grant	grant	NOUN
grj-139	172	13	(	(	PUNCT
grj-139	172	14	project	project	NOUN
grj-139	172	15	number	number	NOUN
grj-139	172	16	:	:	PUNCT
grj-139	172	17	2022	2022	NUM
grj-139	172	18	-	-	SYM
grj-139	172	19	67013	67013	NUM
grj-139	172	20	-	-	PUNCT
grj-139	172	21	36269	36269	NUM
grj-139	172	22	)	)	PUNCT
grj-139	172	23	.	.	PUNCT
grj-139	173	1	supplemental	supplemental	ADJ
grj-139	173	2	data	data	PROPN
grj-139	173	3	supplemental	supplemental	ADJ
grj-139	173	4	figure	figure	NOUN
grj-139	173	5	1	1	NUM
grj-139	173	6	.	.	PUNCT
grj-139	174	1	alfalfa	alfalfa	PROPN
grj-139	174	2	genetic	genetic	ADJ
grj-139	174	3	map	map	NOUN
grj-139	174	4	construction	construction	NOUN
grj-139	174	5	for	for	ADP
grj-139	174	6	an	an	DET
grj-139	174	7	f1	f1	NOUN
grj-139	174	8	,	,	PUNCT
grj-139	174	9	bc1	bc1	NOUN
grj-139	174	10	,	,	PUNCT
grj-139	174	11	and	and	CCONJ
grj-139	174	12	a	a	DET
grj-139	174	13	joint	joint	ADJ
grj-139	174	14	map	map	NOUN
grj-139	174	15	of	of	ADP
grj-139	174	16	the	the	DET
grj-139	174	17	consensus	consensus	NOUN
grj-139	174	18	.	.	PUNCT
grj-139	175	1	supplemental	supplemental	ADJ
grj-139	175	2	figure	figure	NOUN
grj-139	175	3	2	2	NUM
grj-139	175	4	.	.	PUNCT
grj-139	175	5	missing	miss	VERB
grj-139	175	6	data	data	NOUN
grj-139	175	7	rates	rate	NOUN
grj-139	175	8	for	for	ADP
grj-139	175	9	different	different	ADJ
grj-139	175	10	grouped	group	VERB
grj-139	175	11	subsets	subset	NOUN
grj-139	175	12	of	of	ADP
grj-139	175	13	genetic	genetic	ADJ
grj-139	175	14	material	material	NOUN
grj-139	175	15	.	.	PUNCT
grj-139	176	1	supplemental	supplemental	ADJ
grj-139	176	2	table	table	NOUN
grj-139	176	3	1	1	NUM
grj-139	176	4	.	.	PUNCT
grj-139	176	5	final	final	ADJ
grj-139	176	6	3,000	3,000	NUM
grj-139	176	7	loci	locus	NOUN
grj-139	176	8	selected	select	VERB
grj-139	176	9	for	for	ADP
grj-139	176	10	the	the	DET
grj-139	176	11	dartag	dartag	PROPN
grj-139	176	12	panel	panel	PROPN
grj-139	176	13	.	.	PUNCT
grj-139	177	1	author	author	NOUN
grj-139	177	2	contributions	contribution	NOUN
grj-139	177	3	dz	dz	PROPN
grj-139	177	4	,	,	PUNCT
grj-139	177	5	kmmg	kmmg	X
grj-139	177	6	,	,	PUNCT
grj-139	177	7	ds	ds	ADJ
grj-139	177	8	and	and	CCONJ
grj-139	177	9	mjs	mjs	NOUN
grj-139	177	10	contributed	contribute	VERB
grj-139	177	11	to	to	ADP
grj-139	177	12	experimental	experimental	ADJ
grj-139	177	13	design	design	NOUN
grj-139	177	14	and	and	CCONJ
grj-139	177	15	planning	planning	NOUN
grj-139	177	16	.	.	PUNCT
grj-139	178	1	dz	dz	ADJ
grj-139	178	2	,	,	PUNCT
grj-139	178	3	ds	ds	ADJ
grj-139	178	4	and	and	CCONJ
grj-139	178	5	mjs	mjs	NOUN
grj-139	178	6	selected	select	VERB
grj-139	178	7	the	the	DET
grj-139	178	8	diversity	diversity	NOUN
grj-139	178	9	panel	panel	NOUN
grj-139	178	10	for	for	ADP
grj-139	178	11	wgs	wgs	NOUN
grj-139	178	12	.	.	PUNCT
grj-139	179	1	ds	ds	PROPN
grj-139	179	2	,	,	PUNCT
grj-139	179	3	mp	mp	PROPN
grj-139	179	4	and	and	CCONJ
grj-139	179	5	bi	bi	NOUN
grj-139	179	6	grew	grow	VERB
grj-139	179	7	and	and	CCONJ
grj-139	179	8	harvested	harvest	VERB
grj-139	179	9	all	all	DET
grj-139	179	10	plant	plant	NOUN
grj-139	179	11	materials	material	NOUN
grj-139	179	12	used	use	VERB
grj-139	179	13	in	in	ADP
grj-139	179	14	the	the	DET
grj-139	179	15	study	study	NOUN
grj-139	179	16	.	.	PUNCT
grj-139	180	1	kmmg	kmmg	PROPN
grj-139	180	2	performed	perform	VERB
grj-139	180	3	all	all	DET
grj-139	180	4	the	the	DET
grj-139	180	5	wgs	wgs	NOUN
grj-139	180	6	analyses	analysis	NOUN
grj-139	180	7	,	,	PUNCT
grj-139	180	8	snp	snp	ADJ
grj-139	180	9	database	database	NOUN
grj-139	180	10	creation	creation	NOUN
grj-139	180	11	,	,	PUNCT
grj-139	180	12	filtering	filter	VERB
grj-139	180	13	pipelines	pipeline	NOUN
grj-139	180	14	and	and	CCONJ
grj-139	180	15	quality	quality	NOUN
grj-139	180	16	control	control	NOUN
grj-139	180	17	analyses	analyse	VERB
grj-139	180	18	to	to	PART
grj-139	180	19	create	create	VERB
grj-139	180	20	the	the	DET
grj-139	180	21	3k	3k	NUM
grj-139	180	22	panel	panel	NOUN
grj-139	180	23	.	.	PUNCT
grj-139	181	1	khu	khu	PROPN
grj-139	181	2	managed	manage	VERB
grj-139	181	3	the	the	DET
grj-139	181	4	panel	panel	NOUN
grj-139	181	5	creation	creation	NOUN
grj-139	181	6	at	at	ADP
grj-139	181	7	diversity	diversity	NOUN
grj-139	181	8	arrays	array	VERB
grj-139	181	9	technology	technology	NOUN
grj-139	181	10	.	.	PUNCT
grj-139	182	1	dz	dz	PROPN
grj-139	182	2	,	,	PUNCT
grj-139	182	3	mm	mm	PROPN
grj-139	182	4	and	and	CCONJ
grj-139	182	5	ds	ds	PROPN
grj-139	182	6	executed	execute	VERB
grj-139	182	7	the	the	DET
grj-139	182	8	data	data	NOUN
grj-139	182	9	analyses	analysis	NOUN
grj-139	182	10	and	and	CCONJ
grj-139	182	11	genetic	genetic	ADJ
grj-139	182	12	mapping	mapping	NOUN
grj-139	182	13	.	.	PUNCT
grj-139	183	1	dz	dz	PROPN
grj-139	183	2	and	and	CCONJ
grj-139	183	3	mjs	mjs	NOUN
grj-139	183	4	wrote	write	VERB
grj-139	183	5	the	the	DET
grj-139	183	6	initial	initial	ADJ
grj-139	183	7	draft	draft	NOUN
grj-139	183	8	of	of	ADP
grj-139	183	9	the	the	DET
grj-139	183	10	manuscript	manuscript	NOUN
grj-139	183	11	.	.	PUNCT
grj-139	184	1	cb	cb	PROPN
grj-139	184	2	managed	manage	VERB
grj-139	184	3	experiments	experiment	NOUN
grj-139	184	4	and	and	CCONJ
grj-139	184	5	communication	communication	NOUN
grj-139	184	6	among	among	ADP
grj-139	184	7	all	all	DET
grj-139	184	8	authors	author	NOUN
grj-139	184	9	involved	involve	VERB
grj-139	184	10	.	.	PUNCT
grj-139	185	1	all	all	DET
grj-139	185	2	authors	author	NOUN
grj-139	185	3	contributed	contribute	VERB
grj-139	185	4	to	to	ADP
grj-139	185	5	reviewing	review	VERB
grj-139	185	6	the	the	DET
grj-139	185	7	manuscript	manuscript	NOUN
grj-139	185	8	.	.	PUNCT
grj-139	186	1	conflict	conflict	NOUN
grj-139	186	2	of	of	ADP
grj-139	186	3	interest	interest	NOUN
grj-139	186	4	statement	statement	NOUN
grj-139	186	5	the	the	DET
grj-139	186	6	authors	author	NOUN
grj-139	186	7	have	have	VERB
grj-139	186	8	no	no	DET
grj-139	186	9	conflicts	conflict	NOUN
grj-139	186	10	of	of	ADP
grj-139	186	11	interest	interest	NOUN
grj-139	186	12	to	to	PART
grj-139	186	13	report	report	VERB
grj-139	186	14	.	.	PUNCT
grj-139	187	1	references	reference	NOUN
grj-139	187	2	blyton	blyton	PROPN
grj-139	187	3	,	,	PUNCT
grj-139	187	4	m.	m.	PROPN
grj-139	187	5	d.	d.	PROPN
grj-139	187	6	j.	j.	PROPN
grj-139	187	7	,	,	PUNCT
grj-139	187	8	brice	brice	PROPN
grj-139	187	9	,	,	PUNCT
grj-139	187	10	k.	k.	PROPN
grj-139	187	11	l.	l.	PROPN
grj-139	187	12	,	,	PUNCT
grj-139	187	13	heller	heller	NOUN
grj-139	187	14	-	-	PUNCT
grj-139	187	15	uszynska	uszynska	PROPN
grj-139	187	16	,	,	PUNCT
grj-139	187	17	k.	k.	PROPN
grj-139	187	18	,	,	PUNCT
grj-139	187	19	pascoe	pascoe	PROPN
grj-139	187	20	,	,	PUNCT
grj-139	187	21	j.	j.	PROPN
grj-139	187	22	,	,	PUNCT
grj-139	187	23	jaccoud	jaccoud	PROPN
grj-139	187	24	,	,	PUNCT
grj-139	187	25	d.	d.	PROPN
grj-139	187	26	,	,	PUNCT
grj-139	187	27	leigh	leigh	PROPN
grj-139	187	28	,	,	PUNCT
grj-139	187	29	k.	k.	PROPN
grj-139	187	30	a.	a.	PROPN
grj-139	187	31	and	and	CCONJ
grj-139	187	32	moore	moore	PROPN
grj-139	187	33	,	,	PUNCT
grj-139	187	34	b.	b.	PROPN
grj-139	187	35	d.	d.	PROPN
grj-139	187	36	(	(	PUNCT
grj-139	187	37	2023	2023	NUM
grj-139	187	38	)	)	PUNCT
grj-139	187	39	.	.	PUNCT
grj-139	188	1	a	a	DET
grj-139	188	2	new	new	ADJ
grj-139	188	3	genetic	genetic	ADJ
grj-139	188	4	method	method	NOUN
grj-139	188	5	for	for	ADP
grj-139	188	6	diet	diet	NOUN
grj-139	188	7	determination	determination	NOUN
grj-139	188	8	from	from	ADP
grj-139	188	9	faeces	faece	NOUN
grj-139	188	10	that	that	PRON
grj-139	188	11	provides	provide	VERB
grj-139	188	12	species	species	NOUN
grj-139	188	13	level	level	NOUN
grj-139	188	14	resolution	resolution	NOUN
grj-139	188	15	in	in	ADP
grj-139	188	16	the	the	DET
grj-139	188	17	koala	koala	NOUN
grj-139	188	18	.	.	PUNCT
grj-139	189	1	biorxiv	biorxiv	PROPN
grj-139	189	2	2023.02.12.528172	2023.02.12.528172	NOUN
grj-139	189	3	.	.	PUNCT
grj-139	190	1	https://doi.org/10.1101/2023.02.12.528172	https://doi.org/10.1101/2023.02.12.528172	NOUN
grj-139	190	2	bolger	bolger	PROPN
grj-139	190	3	,	,	PUNCT
grj-139	190	4	a.	a.	NOUN
grj-139	190	5	m.	m.	NOUN
grj-139	190	6	,	,	PUNCT
grj-139	190	7	lohse	lohse	PROPN
grj-139	190	8	,	,	PUNCT
grj-139	190	9	m.	m.	NOUN
grj-139	190	10	and	and	CCONJ
grj-139	190	11	usadel	usadel	NOUN
grj-139	190	12	,	,	PUNCT
grj-139	190	13	b.	b.	PROPN
grj-139	190	14	(	(	PUNCT
grj-139	190	15	2014	2014	NUM
grj-139	190	16	)	)	PUNCT
grj-139	190	17	.	.	PUNCT
grj-139	191	1	trimmomatic	trimmomatic	ADJ
grj-139	191	2	:	:	PUNCT
grj-139	191	3	a	a	DET
grj-139	191	4	flexible	flexible	ADJ
grj-139	191	5	trimmer	trimmer	NOUN
grj-139	191	6	for	for	ADP
grj-139	191	7	illumina	illumina	ADJ
grj-139	191	8	sequence	sequence	NOUN
grj-139	191	9	data	data	PROPN
grj-139	191	10	.	.	PUNCT
grj-139	192	1	bioinform	bioinform	NOUN
grj-139	192	2	30(15	30(15	NUM
grj-139	192	3	)	)	PUNCT
grj-139	192	4	,	,	PUNCT
grj-139	192	5	2144–2120	2144–2120	NUM
grj-139	192	6	.	.	PUNCT
grj-139	193	1	https://doi.org/10.1093/bioinformatics/btu170	https://doi.org/10.1093/bioinformatics/btu170	NOUN
grj-139	193	2	chen	chen	PROPN
grj-139	193	3	,	,	PUNCT
grj-139	193	4	h.	h.	PROPN
grj-139	193	5	,	,	PUNCT
grj-139	193	6	zeng	zeng	PROPN
grj-139	193	7	,	,	PUNCT
grj-139	193	8	y.	y.	PROPN
grj-139	193	9	,	,	PUNCT
grj-139	193	10	yang	yang	PROPN
grj-139	193	11	,	,	PUNCT
grj-139	193	12	y.	y.	PROPN
grj-139	193	13	,	,	PUNCT
grj-139	193	14	huang	huang	PROPN
grj-139	193	15	,	,	PUNCT
grj-139	193	16	l.	l.	PROPN
grj-139	193	17	,	,	PUNCT
grj-139	193	18	tang	tang	PROPN
grj-139	193	19	,	,	PUNCT
grj-139	193	20	b.	b.	PROPN
grj-139	193	21	,	,	PUNCT
grj-139	193	22	zhang	zhang	PROPN
grj-139	193	23	,	,	PUNCT
grj-139	193	24	h.	h.	PROPN
grj-139	193	25	,	,	PUNCT
grj-139	193	26	hao	hao	PROPN
grj-139	193	27	,	,	PUNCT
grj-139	193	28	f.	f.	PROPN
grj-139	193	29	,	,	PUNCT
grj-139	193	30	liu	liu	PROPN
grj-139	193	31	,	,	PUNCT
grj-139	193	32	w.	w.	PROPN
grj-139	193	33	,	,	PUNCT
grj-139	193	34	li	li	PROPN
grj-139	193	35	,	,	PUNCT
grj-139	193	36	y.	y.	PROPN
grj-139	193	37	,	,	PUNCT
grj-139	193	38	liu	liu	PROPN
grj-139	193	39	,	,	PUNCT
grj-139	193	40	y.	y.	PROPN
grj-139	193	41	,	,	PUNCT
grj-139	193	42	zhang	zhang	PROPN
grj-139	193	43	,	,	PUNCT
grj-139	193	44	x.	x.	PROPN
grj-139	193	45	,	,	PUNCT
grj-139	193	46	zhang	zhang	PROPN
grj-139	193	47	,	,	PUNCT
grj-139	193	48	r.	r.	PROPN
grj-139	193	49	,	,	PUNCT
grj-139	193	50	zhang	zhang	PROPN
grj-139	193	51	,	,	PUNCT
grj-139	193	52	y.	y.	PROPN
grj-139	193	53	,	,	PUNCT
grj-139	193	54	li	li	PROPN
grj-139	193	55	,	,	PUNCT
grj-139	193	56	y.	y.	PROPN
grj-139	193	57	,	,	PUNCT
grj-139	193	58	wang	wang	PROPN
grj-139	193	59	,	,	PUNCT
grj-139	193	60	k.	k.	PROPN
grj-139	193	61	,	,	PUNCT
grj-139	193	62	he	he	PRON
grj-139	193	63	,	,	PUNCT
grj-139	193	64	h.	h.	PROPN
grj-139	193	65	,	,	PUNCT
grj-139	193	66	wang	wang	PROPN
grj-139	193	67	,	,	PUNCT
grj-139	193	68	z.	z.	PROPN
grj-139	193	69	,	,	PUNCT
grj-139	193	70	fan	fan	PROPN
grj-139	193	71	,	,	PUNCT
grj-139	193	72	g.	g.	PROPN
grj-139	193	73	,	,	PUNCT
grj-139	193	74	yang	yang	PROPN
grj-139	193	75	,	,	PUNCT
grj-139	193	76	h.	h.	PROPN
grj-139	193	77	,	,	PUNCT
grj-139	193	78	bao	bao	PROPN
grj-139	193	79	,	,	PUNCT
grj-139	193	80	a.	a.	PROPN
grj-139	193	81	,	,	PUNCT
grj-139	193	82	shang	shang	PROPN
grj-139	193	83	,	,	PUNCT
grj-139	193	84	z.	z.	PROPN
grj-139	193	85	,	,	PUNCT
grj-139	193	86	chen	chen	PROPN
grj-139	193	87	,	,	PUNCT
grj-139	193	88	j.	j.	PROPN
grj-139	193	89	,	,	PUNCT
grj-139	193	90	wang	wang	PROPN
grj-139	193	91	,	,	PUNCT
grj-139	193	92	w.	w.	PROPN
grj-139	193	93	and	and	CCONJ
grj-139	193	94	qiu	qiu	PROPN
grj-139	193	95	,	,	PUNCT
grj-139	193	96	q.	q.	PROPN
grj-139	193	97	(	(	PUNCT
grj-139	193	98	2020	2020	NUM
grj-139	193	99	)	)	PUNCT
grj-139	193	100	.	.	PUNCT
grj-139	194	1	allele	allele	NOUN
grj-139	194	2	-	-	PUNCT
grj-139	194	3	aware	aware	ADJ
grj-139	194	4	chromosome	chromosome	NOUN
grj-139	194	5	-	-	PUNCT
grj-139	194	6	level	level	NOUN
grj-139	194	7	genome	genome	NOUN
grj-139	194	8	assembly	assembly	NOUN
grj-139	194	9	and	and	CCONJ
grj-139	194	10	efficient	efficient	ADJ
grj-139	194	11	transgene	transgene	NOUN
grj-139	194	12	-	-	PUNCT
grj-139	194	13	free	free	ADJ
grj-139	194	14	genome	genome	NOUN
grj-139	194	15	editing	editing	NOUN
grj-139	194	16	for	for	ADP
grj-139	194	17	the	the	DET
grj-139	194	18	autotetraploid	autotetraploid	NOUN
grj-139	194	19	cultivated	cultivate	VERB
grj-139	194	20	alfalfa	alfalfa	NOUN
grj-139	194	21	.	.	PUNCT
grj-139	195	1	nature	nature	NOUN
grj-139	195	2	comm	comm	NOUN
grj-139	195	3	11	11	NUM
grj-139	195	4	,	,	PUNCT
grj-139	195	5	1–11	1–11	PROPN
grj-139	195	6	.	.	PUNCT
grj-139	196	1	https://doi.org/10.1038/s41467-020-16338-x	https://doi.org/10.1038/s41467-020-16338-x	PROPN
grj-139	196	2	darrier	darrier	PROPN
grj-139	196	3	,	,	PUNCT
grj-139	196	4	b.	b.	PROPN
grj-139	196	5	,	,	PUNCT
grj-139	196	6	russell	russell	PROPN
grj-139	196	7	,	,	PUNCT
grj-139	196	8	j.	j.	PROPN
grj-139	196	9	,	,	PUNCT
grj-139	196	10	milner	milner	PROPN
grj-139	196	11	,	,	PUNCT
grj-139	196	12	s.	s.	PROPN
grj-139	196	13	g.	g.	PROPN
grj-139	196	14	,	,	PUNCT
grj-139	196	15	hedley	hedley	PROPN
grj-139	196	16	,	,	PUNCT
grj-139	196	17	p.	p.	PROPN
grj-139	196	18	e.	e.	PROPN
grj-139	196	19	,	,	PUNCT
grj-139	196	20	shaw	shaw	PROPN
grj-139	196	21	,	,	PUNCT
grj-139	196	22	p.	p.	PROPN
grj-139	196	23	d.	d.	PROPN
grj-139	196	24	,	,	PUNCT
grj-139	196	25	macaulay	macaulay	PROPN
grj-139	196	26	,	,	PUNCT
grj-139	196	27	m.	m.	NOUN
grj-139	196	28	,	,	PUNCT
grj-139	196	29	ramsay	ramsay	PROPN
grj-139	196	30	,	,	PUNCT
grj-139	196	31	l.	l.	PROPN
grj-139	196	32	d.	d.	PROPN
grj-139	196	33	,	,	PUNCT
grj-139	196	34	halpin	halpin	PROPN
grj-139	196	35	,	,	PUNCT
grj-139	196	36	c.	c.	PROPN
grj-139	196	37	,	,	PUNCT
grj-139	196	38	mascher	mascher	NOUN
grj-139	196	39	,	,	PUNCT
grj-139	196	40	m.	m.	NOUN
grj-139	196	41	,	,	PUNCT
grj-139	196	42	fleury	fleury	PROPN
grj-139	196	43	,	,	PUNCT
grj-139	196	44	d.	d.	PROPN
grj-139	196	45	l.	l.	PROPN
grj-139	196	46	,	,	PUNCT
grj-139	196	47	landridge	landridge	PROPN
grj-139	196	48	,	,	PUNCT
grj-139	196	49	p.	p.	PROPN
grj-139	196	50	,	,	PUNCT
grj-139	196	51	stein	stein	PROPN
grj-139	196	52	,	,	PUNCT
grj-139	196	53	n.	n.	PROPN
grj-139	196	54	and	and	CCONJ
grj-139	196	55	waugh	waugh	PROPN
grj-139	196	56	,	,	PUNCT
grj-139	196	57	r.	r.	PROPN
grj-139	196	58	(	(	PUNCT
grj-139	196	59	2019	2019	NUM
grj-139	196	60	)	)	PUNCT
grj-139	196	61	.	.	PUNCT
grj-139	197	1	a	a	DET
grj-139	197	2	comparison	comparison	NOUN
grj-139	197	3	of	of	ADP
grj-139	197	4	mainstream	mainstream	ADJ
grj-139	197	5	genotyping	genotyping	NOUN
grj-139	197	6	platforms	platform	NOUN
grj-139	197	7	for	for	ADP
grj-139	197	8	the	the	DET
grj-139	197	9	evaluation	evaluation	NOUN
grj-139	197	10	and	and	CCONJ
grj-139	197	11	use	use	NOUN
grj-139	197	12	of	of	ADP
grj-139	197	13	barley	barley	NOUN
grj-139	197	14	genetic	genetic	ADJ
grj-139	197	15	resources	resource	NOUN
grj-139	197	16	.	.	PUNCT
grj-139	198	1	front	front	ADJ
grj-139	198	2	plant	plant	NOUN
grj-139	198	3	sci	sci	PROPN
grj-139	198	4	10	10	NUM
grj-139	198	5	,	,	PUNCT
grj-139	198	6	1–14	1–14	PROPN
grj-139	198	7	.	.	PUNCT
grj-139	199	1	https://doi.org/10.3389/fpls.2019.00544	https://doi.org/10.3389/fpls.2019.00544	PROPN
grj-139	199	2	eathington	eathington	NOUN
grj-139	199	3	,	,	PUNCT
grj-139	199	4	s.	s.	PROPN
grj-139	199	5	r.	r.	PROPN
grj-139	199	6	,	,	PUNCT
grj-139	199	7	crosbie	crosbie	NOUN
grj-139	199	8	,	,	PUNCT
grj-139	199	9	t.	t.	NOUN
grj-139	199	10	m.	m.	NOUN
grj-139	199	11	,	,	PUNCT
grj-139	199	12	edwards	edwards	PROPN
grj-139	199	13	,	,	PUNCT
grj-139	199	14	m.	m.	PROPN
grj-139	199	15	d.	d.	PROPN
grj-139	199	16	,	,	PUNCT
grj-139	199	17	reiter	reiter	PROPN
grj-139	199	18	,	,	PUNCT
grj-139	199	19	r.	r.	PROPN
grj-139	199	20	s.	s.	PROPN
grj-139	199	21	and	and	CCONJ
grj-139	199	22	bull	bull	PROPN
grj-139	199	23	,	,	PUNCT
grj-139	199	24	j.	j.	PROPN
grj-139	199	25	k.	k.	PROPN
grj-139	199	26	(	(	PUNCT
grj-139	199	27	2007	2007	NUM
grj-139	199	28	)	)	PUNCT
grj-139	199	29	.	.	PUNCT
grj-139	200	1	molecular	molecular	ADJ
grj-139	200	2	markers	marker	NOUN
grj-139	200	3	in	in	ADP
grj-139	200	4	a	a	DET
grj-139	200	5	commercial	commercial	ADJ
grj-139	200	6	breeding	breeding	NOUN
grj-139	200	7	program	program	NOUN
grj-139	200	8	.	.	PUNCT
grj-139	201	1	crop	crop	NOUN
grj-139	201	2	sci	sci	PROPN
grj-139	201	3	47	47	NUM
grj-139	201	4	,	,	PUNCT
grj-139	201	5	154–163	154–163	NUM
grj-139	201	6	.	.	PUNCT
grj-139	202	1	https://doi.org/10.2135/cropsci2007.04.0015ipbs	https://doi.org/10.2135/cropsci2007.04.0015ipb	NOUN
grj-139	202	2	fernandez	fernandez	PROPN
grj-139	202	3	,	,	PUNCT
grj-139	202	4	a.	a.	PROPN
grj-139	202	5	l.	l.	PROPN
grj-139	202	6	,	,	PUNCT
grj-139	202	7	sheaffer	sheaffer	PROPN
grj-139	202	8	,	,	PUNCT
grj-139	202	9	c.	c.	PROPN
grj-139	202	10	c.	c.	PROPN
grj-139	202	11	,	,	PUNCT
grj-139	202	12	tautges	tautge	NOUN
grj-139	202	13	,	,	PUNCT
grj-139	202	14	n.	n.	PROPN
grj-139	202	15	e.	e.	PROPN
grj-139	202	16	,	,	PUNCT
grj-139	202	17	putnam	putnam	PROPN
grj-139	202	18	,	,	PUNCT
grj-139	202	19	d.	d.	PROPN
grj-139	202	20	h.	h.	PROPN
grj-139	202	21	and	and	CCONJ
grj-139	202	22	hunter	hunter	NOUN
grj-139	202	23	,	,	PUNCT
grj-139	202	24	m.	m.	NOUN
grj-139	202	25	c.	c.	PROPN
grj-139	202	26	(	(	PUNCT
grj-139	202	27	2019	2019	NUM
grj-139	202	28	)	)	PUNCT
grj-139	202	29	.	.	PUNCT
grj-139	203	1	alfalfa	alfalfa	NOUN
grj-139	203	2	,	,	PUNCT
grj-139	203	3	wildlife	wildlife	NOUN
grj-139	203	4	,	,	PUNCT
grj-139	203	5	and	and	CCONJ
grj-139	203	6	the	the	DET
grj-139	203	7	environment	environment	NOUN
grj-139	203	8	(	(	PUNCT
grj-139	203	9	st	st	PROPN
grj-139	203	10	.	.	PROPN
grj-139	203	11	paul	paul	PROPN
grj-139	203	12	,	,	PUNCT
grj-139	203	13	mn	mn	PROPN
grj-139	203	14	:	:	PUNCT
grj-139	203	15	national	national	PROPN
grj-139	203	16	alfalfa	alfalfa	PROPN
grj-139	203	17	and	and	CCONJ
grj-139	203	18	forage	forage	PROPN
grj-139	203	19	alliance	alliance	NOUN
grj-139	203	20	)	)	PUNCT
grj-139	203	21	.	.	PUNCT
grj-139	204	1	ferrão	ferrão	PROPN
grj-139	204	2	,	,	PUNCT
grj-139	204	3	l.	l.	PROPN
grj-139	204	4	f.	f.	PROPN
grj-139	204	5	v.	v.	PROPN
grj-139	204	6	,	,	PUNCT
grj-139	204	7	amadeu	amadeu	PROPN
grj-139	204	8	,	,	PUNCT
grj-139	204	9	r.	r.	PROPN
grj-139	204	10	r.	r.	PROPN
grj-139	204	11	,	,	PUNCT
grj-139	204	12	benevenuto	benevenuto	PROPN
grj-139	204	13	,	,	PUNCT
grj-139	204	14	j.	j.	PROPN
grj-139	204	15	,	,	PUNCT
grj-139	204	16	oliveira	oliveira	PROPN
grj-139	204	17	,	,	PUNCT
grj-139	204	18	i.	i.	PROPN
grj-139	204	19	d.	d.	PROPN
grj-139	204	20	b.	b.	PROPN
grj-139	204	21	and	and	CCONJ
grj-139	204	22	munoz	munoz	PROPN
grj-139	204	23	,	,	PUNCT
grj-139	204	24	p.	p.	PROPN
grj-139	204	25	r.	r.	PROPN
grj-139	204	26	(	(	PUNCT
grj-139	204	27	2021	2021	NUM
grj-139	204	28	)	)	PUNCT
grj-139	204	29	.	.	PUNCT
grj-139	205	1	genomic	genomic	ADJ
grj-139	205	2	selection	selection	NOUN
grj-139	205	3	in	in	ADP
grj-139	205	4	an	an	DET
grj-139	205	5	outcrossing	outcrosse	VERB
grj-139	205	6	autotetraploid	autotetraploid	ADJ
grj-139	205	7	fruit	fruit	NOUN
grj-139	205	8	crop	crop	NOUN
grj-139	205	9	:	:	PUNCT
grj-139	205	10	lessons	lesson	NOUN
grj-139	205	11	from	from	ADP
grj-139	205	12	blueberry	blueberry	NOUN
grj-139	205	13	breeding	breeding	NOUN
grj-139	205	14	.	.	PUNCT
grj-139	206	1	front	front	ADJ
grj-139	206	2	plant	plant	NOUN
grj-139	206	3	sci	sci	PROPN
grj-139	206	4	12	12	NUM
grj-139	206	5	,	,	PUNCT
grj-139	206	6	1–13	1–13	NOUN
grj-139	206	7	.	.	PUNCT
grj-139	207	1	https://doi.org/10.3389/fpls.2021.676326	https://doi.org/10.3389/fpls.2021.676326	NOUN
grj-139	207	2	feurerstein	feurerstein	NOUN
grj-139	207	3	,	,	PUNCT
grj-139	207	4	u.	u.	PROPN
grj-139	207	5	,	,	PUNCT
grj-139	207	6	brown	brown	PROPN
grj-139	207	7	,	,	PUNCT
grj-139	207	8	a.	a.	PROPN
grj-139	207	9	h.	h.	PROPN
grj-139	207	10	d.	d.	PROPN
grj-139	207	11	and	and	CCONJ
grj-139	207	12	burdon	burdon	PROPN
grj-139	207	13	,	,	PUNCT
grj-139	207	14	j.	j.	PROPN
grj-139	207	15	j.	j.	PROPN
grj-139	207	16	(	(	PUNCT
grj-139	207	17	1990	1990	NUM
grj-139	207	18	)	)	PUNCT
grj-139	207	19	.	.	PUNCT
grj-139	208	1	linkage	linkage	NOUN
grj-139	208	2	of	of	ADP
grj-139	208	3	rust	rust	NOUN
grj-139	208	4	resistance	resistance	NOUN
grj-139	208	5	genes	gene	NOUN
grj-139	208	6	from	from	ADP
grj-139	208	7	wild	wild	ADJ
grj-139	208	8	barley	barley	NOUN
grj-139	208	9	(	(	PUNCT
grj-139	208	10	hordeum	hordeum	NOUN
grj-139	208	11	spotaneum	spotaneum	NOUN
grj-139	208	12	)	)	PUNCT
grj-139	208	13	with	with	ADP
grj-139	208	14	isozyme	isozyme	NOUN
grj-139	208	15	markers	marker	NOUN
grj-139	208	16	.	.	PUNCT
grj-139	209	1	plant	plant	NOUN
grj-139	209	2	breeding	breed	VERB
grj-139	209	3	104	104	NUM
grj-139	209	4	,	,	PUNCT
grj-139	209	5	318–324	318–324	NUM
grj-139	209	6	.	.	PUNCT
grj-139	210	1	https://doi.org/10.1111/j.1439-0523.1990.tb00442.x	https://doi.org/10.1111/j.1439-0523.1990.tb00442.x	PROPN
grj-139	210	2	gerard	gerard	PROPN
grj-139	210	3	,	,	PUNCT
grj-139	210	4	d.	d.	PROPN
grj-139	210	5	,	,	PUNCT
grj-139	210	6	ferrão	ferrão	PROPN
grj-139	210	7	,	,	PUNCT
grj-139	210	8	l.	l.	PROPN
grj-139	210	9	f.	f.	PROPN
grj-139	210	10	v.	v.	PROPN
grj-139	210	11	,	,	PUNCT
grj-139	210	12	garcia	garcia	PROPN
grj-139	210	13	,	,	PUNCT
grj-139	210	14	a.	a.	PROPN
grj-139	210	15	a.	a.	PROPN
grj-139	210	16	f.	f.	PROPN
grj-139	210	17	and	and	CCONJ
grj-139	210	18	stephens	stephens	PROPN
grj-139	210	19	,	,	PUNCT
grj-139	210	20	m.	m.	NOUN
grj-139	210	21	(	(	PUNCT
grj-139	210	22	2018	2018	NUM
grj-139	210	23	)	)	PUNCT
grj-139	210	24	.	.	PUNCT
grj-139	211	1	genotyping	genotype	VERB
grj-139	211	2	polyploids	polyploid	NOUN
grj-139	211	3	from	from	ADP
grj-139	211	4	messy	messy	ADJ
grj-139	211	5	sequencing	sequence	VERB
grj-139	211	6	data	datum	NOUN
grj-139	211	7	.	.	PUNCT
grj-139	212	1	genetics	genetic	NOUN
grj-139	212	2	210(3	210(3	NUM
grj-139	212	3	)	)	PUNCT
grj-139	212	4	,	,	PUNCT
grj-139	212	5	789–807	789–807	NUM
grj-139	212	6	.	.	X
grj-139	212	7	https://doi.org/10.1534/genetics.118.301468	https://doi.org/10.1534/genetics.118.301468	PROPN
grj-139	212	8	hasan	hasan	PROPN
grj-139	212	9	,	,	PUNCT
grj-139	212	10	n.	n.	PROPN
grj-139	212	11	,	,	PUNCT
grj-139	212	12	choudhary	choudhary	PROPN
grj-139	212	13	,	,	PUNCT
grj-139	212	14	s.	s.	PROPN
grj-139	212	15	,	,	PUNCT
grj-139	212	16	naaz	naaz	PROPN
grj-139	212	17	,	,	PUNCT
grj-139	212	18	n.	n.	NOUN
grj-139	212	19	,	,	PUNCT
grj-139	212	20	sharma	sharma	PROPN
grj-139	212	21	,	,	PUNCT
grj-139	212	22	n.	n.	NOUN
grj-139	212	23	and	and	CCONJ
grj-139	212	24	laskar	laskar	PROPN
grj-139	212	25	,	,	PUNCT
grj-139	212	26	r.	r.	PROPN
grj-139	212	27	a.	a.	PROPN
grj-139	212	28	(	(	PUNCT
grj-139	212	29	2021	2021	NUM
grj-139	212	30	)	)	PUNCT
grj-139	212	31	.	.	PUNCT
grj-139	213	1	recent	recent	ADJ
grj-139	213	2	advancements	advancement	NOUN
grj-139	213	3	in	in	ADP
grj-139	213	4	molecular	molecular	ADJ
grj-139	213	5	marker	marker	NOUN
grj-139	213	6	-	-	PUNCT
grj-139	213	7	assisted	assist	VERB
grj-139	213	8	selection	selection	NOUN
grj-139	213	9	and	and	CCONJ
grj-139	213	10	applications	application	NOUN
grj-139	213	11	in	in	ADP
grj-139	213	12	plant	plant	NOUN
grj-139	213	13	breeding	breeding	NOUN
grj-139	213	14	programmes	programme	NOUN
grj-139	213	15	.	.	PUNCT
grj-139	214	1	j	j	PROPN
grj-139	214	2	genet	genet	PROPN
grj-139	214	3	eng	eng	PROPN
grj-139	214	4	biotech	biotech	PROPN
grj-139	214	5	19	19	NUM
grj-139	214	6	,	,	PUNCT
grj-139	214	7	1–26	1–26	NOUN
grj-139	214	8	.	.	PUNCT
grj-139	215	1	https://doi.org/10.1186/s43141-021-00231-1	https://doi.org/10.1186/s43141-021-00231-1	NUM
grj-139	215	2	hawkins	hawkin	NOUN
grj-139	215	3	,	,	PUNCT
grj-139	215	4	c.	c.	PROPN
grj-139	215	5	and	and	CCONJ
grj-139	215	6	yu	yu	PROPN
grj-139	215	7	,	,	PUNCT
grj-139	215	8	l.-x	l.-x	PROPN
grj-139	215	9	.	.	PUNCT
grj-139	216	1	(	(	PUNCT
grj-139	216	2	2018	2018	NUM
grj-139	216	3	)	)	PUNCT
grj-139	216	4	.	.	PUNCT
grj-139	217	1	recent	recent	ADJ
grj-139	217	2	progress	progress	NOUN
grj-139	217	3	in	in	ADP
grj-139	217	4	alfalfa	alfalfa	NOUN
grj-139	217	5	(	(	PUNCT
grj-139	217	6	medicago	medicago	PROPN
grj-139	217	7	sativa	sativa	PROPN
grj-139	217	8	l.	l.	PROPN
grj-139	217	9	)	)	PUNCT
grj-139	217	10	genomics	genomic	NOUN
grj-139	217	11	and	and	CCONJ
grj-139	217	12	genomic	genomic	NOUN
grj-139	217	13	selection	selection	NOUN
grj-139	217	14	.	.	PUNCT
grj-139	218	1	the	the	DET
grj-139	218	2	crop	crop	NOUN
grj-139	218	3	journal	journal	PROPN
grj-139	218	4	6	6	NUM
grj-139	218	5	,	,	PUNCT
grj-139	218	6	565–575	565–575	NUM
grj-139	218	7	.	.	PUNCT
grj-139	219	1	https://doi.org/10.1016/j.cj.2018.01.006	https://doi.org/10.1016/j.cj.2018.01.006	PROPN
grj-139	219	2	heffner	heffner	PROPN
grj-139	219	3	,	,	PUNCT
grj-139	219	4	e.	e.	PROPN
grj-139	219	5	l.	l.	PROPN
grj-139	219	6	,	,	PUNCT
grj-139	219	7	sorrells	sorrell	NOUN
grj-139	219	8	,	,	PUNCT
grj-139	219	9	m.	m.	PROPN
grj-139	219	10	e.	e.	PROPN
grj-139	219	11	and	and	CCONJ
grj-139	219	12	jannink	jannink	VERB
grj-139	219	13	,	,	PUNCT
grj-139	219	14	j.-l	j.-l	PROPN
grj-139	219	15	.	.	PUNCT
grj-139	219	16	(	(	PUNCT
grj-139	219	17	2009	2009	NUM
grj-139	219	18	)	)	PUNCT
grj-139	219	19	.	.	PUNCT
grj-139	220	1	genomic	genomic	ADJ
grj-139	220	2	selection	selection	NOUN
grj-139	220	3	for	for	ADP
grj-139	220	4	crop	crop	NOUN
grj-139	220	5	improvement	improvement	NOUN
grj-139	220	6	.	.	PUNCT
grj-139	221	1	crop	crop	NOUN
grj-139	221	2	sci	sci	PROPN
grj-139	221	3	49	49	NUM
grj-139	221	4	,	,	PUNCT
grj-139	221	5	1–12	1–12	NOUN
grj-139	221	6	.	.	PUNCT
grj-139	222	1	https://doi.org/10.2135/cropsci2008.08.0512	https://doi.org/10.2135/cropsci2008.08.0512	PROPN
grj-139	222	2	helentjaris	helentjaris	PROPN
grj-139	222	3	,	,	PUNCT
grj-139	222	4	t.	t.	PROPN
grj-139	222	5	,	,	PUNCT
grj-139	222	6	king	king	NOUN
grj-139	222	7	,	,	PUNCT
grj-139	222	8	g.	g.	PROPN
grj-139	222	9	,	,	PUNCT
grj-139	222	10	slocum	slocum	NOUN
grj-139	222	11	,	,	PUNCT
grj-139	222	12	m.	m.	NOUN
grj-139	222	13	,	,	PUNCT
grj-139	222	14	siedenstrang	siedenstrang	NOUN
grj-139	222	15	,	,	PUNCT
grj-139	222	16	c.	c.	PROPN
grj-139	222	17	and	and	CCONJ
grj-139	222	18	wegman	wegman	PROPN
grj-139	222	19	,	,	PUNCT
grj-139	222	20	s.	s.	PROPN
grj-139	222	21	(	(	PUNCT
grj-139	222	22	1985	1985	NUM
grj-139	222	23	)	)	PUNCT
grj-139	222	24	.	.	PUNCT
grj-139	223	1	restriction	restriction	NOUN
grj-139	223	2	fragment	fragment	NOUN
grj-139	223	3	polymorphisms	polymorphism	NOUN
grj-139	223	4	as	as	ADP
grj-139	223	5	probes	probe	NOUN
grj-139	223	6	for	for	ADP
grj-139	223	7	plant	plant	NOUN
grj-139	223	8	diversity	diversity	NOUN
grj-139	223	9	and	and	CCONJ
grj-139	223	10	their	their	PRON
grj-139	223	11	development	development	NOUN
grj-139	223	12	as	as	ADP
grj-139	223	13	tools	tool	NOUN
grj-139	223	14	for	for	ADP
grj-139	223	15	applied	applied	ADJ
grj-139	223	16	plant	plant	NOUN
grj-139	223	17	breeding	breeding	NOUN
grj-139	223	18	.	.	PUNCT
grj-139	224	1	plant	plant	NOUN
grj-139	224	2	mol	mol	ADP
grj-139	224	3	biol	biol	PROPN
grj-139	224	4	5	5	NUM
grj-139	224	5	,	,	PUNCT
grj-139	224	6	109–118	109–118	NUM
grj-139	224	7	.	.	PUNCT
grj-139	225	1	https://doi.org/10.1007/bf00020093	https://doi.org/10.1007/bf00020093	PROPN
grj-139	225	2	krishnakumar	krishnakumar	PROPN
grj-139	225	3	,	,	PUNCT
grj-139	225	4	s.	s.	PROPN
grj-139	225	5	,	,	PUNCT
grj-139	225	6	zheng	zheng	PROPN
grj-139	225	7	,	,	PUNCT
grj-139	225	8	j.	j.	PROPN
grj-139	225	9	,	,	PUNCT
grj-139	225	10	wilhelmy	wilhelmy	NOUN
grj-139	225	11	,	,	PUNCT
grj-139	225	12	j.	j.	PROPN
grj-139	225	13	,	,	PUNCT
grj-139	225	14	faham	faham	NOUN
grj-139	225	15	,	,	PUNCT
grj-139	225	16	m.	m.	NOUN
grj-139	225	17	,	,	PUNCT
grj-139	225	18	mindrinos	mindrino	NOUN
grj-139	225	19	,	,	PUNCT
grj-139	225	20	m.	m.	NOUN
grj-139	225	21	and	and	CCONJ
grj-139	225	22	davis	davis	PROPN
grj-139	225	23	,	,	PUNCT
grj-139	225	24	r.	r.	PROPN
grj-139	225	25	(	(	PUNCT
grj-139	225	26	2008	2008	NUM
grj-139	225	27	)	)	PUNCT
grj-139	225	28	.	.	PUNCT
grj-139	226	1	a	a	DET
grj-139	226	2	comprehensive	comprehensive	ADJ
grj-139	226	3	assay	assay	NOUN
grj-139	226	4	for	for	ADP
grj-139	226	5	targeted	target	VERB
grj-139	226	6	multiplex	multiplex	NOUN
grj-139	226	7	amplification	amplification	NOUN
grj-139	226	8	of	of	ADP
grj-139	226	9	human	human	ADJ
grj-139	226	10	dna	dna	PROPN
grj-139	226	11	sequences	sequence	NOUN
grj-139	226	12	.	.	PUNCT
grj-139	227	1	pnas	pnas	PROPN
grj-139	227	2	105(27	105(27	NUM
grj-139	227	3	)	)	PUNCT
grj-139	227	4	,	,	PUNCT
grj-139	227	5	9296–9301	9296–9301	NUM
grj-139	227	6	.	.	PUNCT
grj-139	228	1	https://doi.org/10.1073/pnas.0803240105	https://doi.org/10.1073/pnas.0803240105	PROPN
grj-139	228	2	li	li	PROPN
grj-139	228	3	,	,	PUNCT
grj-139	228	4	h.	h.	PROPN
grj-139	228	5	(	(	PUNCT
grj-139	228	6	2013	2013	NUM
grj-139	228	7	)	)	PUNCT
grj-139	228	8	.	.	PUNCT
grj-139	229	1	aligning	align	VERB
grj-139	229	2	sequence	sequence	NOUN
grj-139	229	3	reads	read	NOUN
grj-139	229	4	,	,	PUNCT
grj-139	229	5	clones	clone	NOUN
grj-139	229	6	sequences	sequence	NOUN
grj-139	229	7	and	and	CCONJ
grj-139	229	8	assembly	assembly	NOUN
grj-139	229	9	contigs	contig	NOUN
grj-139	229	10	with	with	ADP
grj-139	229	11	bwa	bwa	PROPN
grj-139	229	12	-	-	PUNCT
grj-139	229	13	mem	mem	PROPN
grj-139	229	14	.	.	PUNCT
grj-139	230	1	arxiv	arxiv	PROPN
grj-139	230	2	1303.3997	1303.3997	NUM
grj-139	230	3	.	.	PUNCT
grj-139	231	1	https://doi.org/10.48550/arxiv.1303.3997	https://doi.org/10.48550/arxiv.1303.3997	PROPN
grj-139	231	2	li	li	PROPN
grj-139	231	3	,	,	PUNCT
grj-139	231	4	h.	h.	PROPN
grj-139	231	5	(	(	PUNCT
grj-139	231	6	2012	2012	NUM
grj-139	231	7	)	)	PUNCT
grj-139	231	8	.	.	PUNCT
grj-139	232	1	exploring	explore	VERB
grj-139	232	2	single	single	ADJ
grj-139	232	3	-	-	PUNCT
grj-139	232	4	sample	sample	NOUN
grj-139	232	5	snp	snp	NOUN
grj-139	232	6	and	and	CCONJ
grj-139	232	7	indel	indel	NOUN
grj-139	232	8	calling	call	VERB
grj-139	232	9	with	with	ADP
grj-139	232	10	whole	whole	ADJ
grj-139	232	11	-	-	PUNCT
grj-139	232	12	genome	genome	NOUN
grj-139	232	13	de	de	NOUN
grj-139	232	14	novo	novo	NOUN
grj-139	232	15	assembly	assembly	NOUN
grj-139	232	16	.	.	PUNCT
grj-139	233	1	bioinform	bioinform	PROPN
grj-139	233	2	28(14	28(14	PROPN
grj-139	233	3	)	)	PUNCT
grj-139	233	4	,	,	PUNCT
grj-139	233	5	1838–1882	1838–1882	NUM
grj-139	233	6	.	.	PUNCT
grj-139	234	1	https://doi.org/10.1093/bioinformatics/bts280	https://doi.org/10.1093/bioinformatics/bts280	ADJ
grj-139	234	2	lorenzana	lorenzana	PROPN
grj-139	234	3	,	,	PUNCT
grj-139	234	4	r.	r.	PROPN
grj-139	234	5	and	and	CCONJ
grj-139	234	6	bernardo	bernardo	PROPN
grj-139	234	7	,	,	PUNCT
grj-139	234	8	r.	r.	PROPN
grj-139	234	9	(	(	PUNCT
grj-139	234	10	2009	2009	NUM
grj-139	234	11	)	)	PUNCT
grj-139	234	12	.	.	PUNCT
grj-139	235	1	accuracy	accuracy	NOUN
grj-139	235	2	of	of	ADP
grj-139	235	3	genotypic	genotypic	NOUN
grj-139	235	4	value	value	NOUN
grj-139	235	5	predictions	prediction	NOUN
grj-139	235	6	for	for	ADP
grj-139	235	7	marker	marker	NOUN
grj-139	235	8	-	-	PUNCT
grj-139	235	9	based	base	VERB
grj-139	235	10	selection	selection	NOUN
grj-139	235	11	in	in	ADP
grj-139	235	12	biparental	biparental	ADJ
grj-139	235	13	plant	plant	NOUN
grj-139	235	14	populations	population	NOUN
grj-139	235	15	.	.	PUNCT
grj-139	236	1	theor	theor	PROPN
grj-139	236	2	appl	appl	PROPN
grj-139	236	3	genet	genet	PROPN
grj-139	236	4	120	120	NUM
grj-139	236	5	,	,	PUNCT
grj-139	236	6	151–161	151–161	NUM
grj-139	236	7	.	.	PUNCT
grj-139	237	1	https://doi.org/10.1007/s00122-009-1166-3	https://doi.org/10.1007/s00122-009-1166-3	NUM
grj-139	237	2	mejia	mejia	PROPN
grj-139	237	3	-	-	PUNCT
grj-139	237	4	guerra	guerra	PROPN
grj-139	237	5	,	,	PUNCT
grj-139	237	6	m.	m.	PROPN
grj-139	237	7	k.	k.	PROPN
grj-139	237	8	,	,	PUNCT
grj-139	237	9	zhao	zhao	PROPN
grj-139	237	10	,	,	PUNCT
grj-139	237	11	d.	d.	PROPN
grj-139	237	12	and	and	CCONJ
grj-139	237	13	sheehan	sheehan	PROPN
grj-139	237	14	,	,	PUNCT
grj-139	237	15	m.	m.	NOUN
grj-139	237	16	j.	j.	PROPN
grj-139	237	17	(	(	PUNCT
grj-139	237	18	2021	2021	NUM
grj-139	237	19	)	)	PUNCT
grj-139	237	20	.	.	PUNCT
grj-139	238	1	genomic	genomic	ADJ
grj-139	238	2	resources	resource	NOUN
grj-139	238	3	for	for	ADP
grj-139	238	4	breeding	breed	VERB
grj-139	238	5	in	in	ADP
grj-139	238	6	alfalfa	alfalfa	NOUN
grj-139	238	7	:	:	PUNCT
grj-139	238	8	availability	availability	NOUN
grj-139	238	9	,	,	PUNCT
grj-139	238	10	utility	utility	NOUN
grj-139	238	11	,	,	PUNCT
grj-139	238	12	and	and	CCONJ
grj-139	238	13	adoption	adoption	NOUN
grj-139	238	14	.	.	PUNCT
grj-139	239	1	in	in	ADP
grj-139	239	2	the	the	DET
grj-139	239	3	alfalfa	alfalfa	NOUN
grj-139	239	4	genome	genome	NOUN
grj-139	239	5	,	,	PUNCT
grj-139	239	6	compendium	compendium	NOUN
grj-139	239	7	of	of	ADP
grj-139	239	8	plant	plant	NOUN
grj-139	239	9	genomes	genome	NOUN
grj-139	239	10	(	(	PUNCT
grj-139	239	11	yu	yu	PROPN
grj-139	239	12	,	,	PUNCT
grj-139	239	13	l	l	NOUN
grj-139	239	14	x	x	X
grj-139	239	15	and	and	CCONJ
grj-139	239	16	kole	kole	PROPN
grj-139	239	17	,	,	PUNCT
grj-139	239	18	c	c	PROPN
grj-139	239	19	,	,	PUNCT
grj-139	239	20	eds	eds	PROPN
grj-139	239	21	.	.	PUNCT
grj-139	239	22	)	)	PUNCT
grj-139	239	23	(	(	PUNCT
grj-139	239	24	cham	cham	PROPN
grj-139	239	25	:	:	PUNCT
grj-139	239	26	springer	springer	NOUN
grj-139	239	27	)	)	PUNCT
grj-139	239	28	,	,	PUNCT
grj-139	239	29	177	177	NUM
grj-139	239	30	-	-	SYM
grj-139	239	31	189	189	NUM
grj-139	239	32	.	.	PUNCT
grj-139	240	1	https://doi.org/10.1007/978-3-030-74466-3_11	https://doi.org/10.1007/978-3-030-74466-3_11	VERB
grj-139	240	2	milner	milner	NOUN
grj-139	240	3	,	,	PUNCT
grj-139	240	4	s.	s.	PROPN
grj-139	240	5	g.	g.	PROPN
grj-139	240	6	,	,	PUNCT
grj-139	240	7	jost	jost	PROPN
grj-139	240	8	,	,	PUNCT
grj-139	240	9	m.	m.	NOUN
grj-139	240	10	,	,	PUNCT
grj-139	240	11	taketa	taketa	PROPN
grj-139	240	12	,	,	PUNCT
grj-139	240	13	s.	s.	PROPN
grj-139	240	14	,	,	PUNCT
grj-139	240	15	mazon	mazon	PROPN
grj-139	240	16	,	,	PUNCT
grj-139	240	17	e.	e.	PROPN
grj-139	240	18	r.	r.	PROPN
grj-139	240	19	,	,	PUNCT
grj-139	240	20	himmelbach	himmelbach	PROPN
grj-139	240	21	,	,	PUNCT
grj-139	240	22	a.	a.	NOUN
grj-139	240	23	,	,	PUNCT
grj-139	240	24	oppermann	oppermann	PROPN
grj-139	240	25	,	,	PUNCT
grj-139	240	26	m.	m.	NOUN
grj-139	240	27	,	,	PUNCT
grj-139	240	28	weise	weise	PROPN
grj-139	240	29	,	,	PUNCT
grj-139	240	30	s.	s.	PROPN
grj-139	240	31	,	,	PUNCT
grj-139	240	32	knupffer	knupffer	PROPN
grj-139	240	33	,	,	PUNCT
grj-139	240	34	h.	h.	PROPN
grj-139	240	35	,	,	PUNCT
grj-139	240	36	basterrechea	basterrechea	PROPN
grj-139	240	37	,	,	PUNCT
grj-139	240	38	m.	m.	NOUN
grj-139	240	39	,	,	PUNCT
grj-139	240	40	könig	könig	PROPN
grj-139	240	41	,	,	PUNCT
grj-139	240	42	p.	p.	NOUN
grj-139	240	43	,	,	PUNCT
grj-139	240	44	schüler	schüler	ADV
grj-139	240	45	,	,	PUNCT
grj-139	240	46	d.	d.	PROPN
grj-139	240	47	,	,	PUNCT
grj-139	240	48	sharma	sharma	PROPN
grj-139	240	49	,	,	PUNCT
grj-139	240	50	r.	r.	PROPN
grj-139	240	51	,	,	PUNCT
grj-139	240	52	pasam	pasam	PROPN
grj-139	240	53	,	,	PUNCT
grj-139	240	54	r.	r.	PROPN
grj-139	240	55	k.	k.	PROPN
grj-139	240	56	,	,	PUNCT
grj-139	240	57	rutten	rutten	PROPN
grj-139	240	58	,	,	PUNCT
grj-139	240	59	t.	t.	PROPN
grj-139	240	60	,	,	PUNCT
grj-139	240	61	guo	guo	PROPN
grj-139	240	62	,	,	PUNCT
grj-139	240	63	g.	g.	PROPN
grj-139	240	64	,	,	PUNCT
grj-139	240	65	xu	xu	PROPN
grj-139	240	66	,	,	PUNCT
grj-139	240	67	d.	d.	PROPN
grj-139	240	68	,	,	PUNCT
grj-139	240	69	zhang	zhang	PROPN
grj-139	240	70	,	,	PUNCT
grj-139	240	71	z.	z.	PROPN
grj-139	240	72	,	,	PUNCT
grj-139	240	73	herren	herren	PROPN
grj-139	240	74	,	,	PUNCT
grj-139	240	75	g.	g.	PROPN
grj-139	240	76	,	,	PUNCT
grj-139	240	77	müller	müller	PROPN
grj-139	240	78	,	,	PUNCT
grj-139	240	79	t.	t.	PROPN
grj-139	240	80	,	,	PUNCT
grj-139	240	81	krattinger	krattinger	PROPN
grj-139	240	82	,	,	PUNCT
grj-139	240	83	s.	s.	PROPN
grj-139	240	84	g.	g.	PROPN
grj-139	240	85	,	,	PUNCT
grj-139	240	86	keller	keller	PROPN
grj-139	240	87	,	,	PUNCT
grj-139	240	88	b.	b.	PROPN
grj-139	240	89	,	,	PUNCT
grj-139	240	90	jiang	jiang	PROPN
grj-139	240	91	,	,	PUNCT
grj-139	240	92	y.	y.	PROPN
grj-139	240	93	,	,	PUNCT
grj-139	240	94	gonzález	gonzález	PROPN
grj-139	240	95	,	,	PUNCT
grj-139	240	96	m.	m.	NOUN
grj-139	240	97	y.	y.	PROPN
grj-139	240	98	,	,	PUNCT
grj-139	240	99	zhao	zhao	PROPN
grj-139	240	100	,	,	PUNCT
grj-139	240	101	y.	y.	PROPN
grj-139	240	102	,	,	PUNCT
grj-139	240	103	habekuß	habekuß	PROPN
grj-139	240	104	,	,	PUNCT
grj-139	240	105	a.	a.	PROPN
grj-139	240	106	,	,	PUNCT
grj-139	240	107	fäber	fäber	PROPN
grj-139	240	108	,	,	PUNCT
grj-139	240	109	s.	s.	PROPN
grj-139	240	110	,	,	PUNCT
grj-139	240	111	ordon	ordon	PROPN
grj-139	240	112	,	,	PUNCT
grj-139	240	113	f.	f.	PROPN
grj-139	240	114	,	,	PUNCT
grj-139	240	115	lange	lange	PROPN
grj-139	240	116	,	,	PUNCT
grj-139	240	117	m.	m.	NOUN
grj-139	240	118	,	,	PUNCT
grj-139	240	119	börner	börner	NOUN
grj-139	240	120	,	,	PUNCT
grj-139	240	121	a.	a.	NOUN
grj-139	240	122	,	,	PUNCT
grj-139	240	123	graner	graner	NOUN
grj-139	240	124	,	,	PUNCT
grj-139	240	125	a.	a.	NOUN
grj-139	240	126	,	,	PUNCT
grj-139	240	127	reif	reif	PROPN
grj-139	240	128	,	,	PUNCT
grj-139	240	129	j.	j.	PROPN
grj-139	240	130	c.	c.	PROPN
grj-139	240	131	,	,	PUNCT
grj-139	240	132	scholz	scholz	NOUN
grj-139	240	133	,	,	PUNCT
grj-139	240	134	u.	u.	PROPN
grj-139	240	135	,	,	PUNCT
grj-139	240	136	mascher	mascher	NOUN
grj-139	240	137	,	,	PUNCT
grj-139	240	138	m.	m.	NOUN
grj-139	240	139	and	and	CCONJ
grj-139	240	140	stein	stein	PROPN
grj-139	240	141	,	,	PUNCT
grj-139	240	142	n.	n.	PROPN
grj-139	240	143	(	(	PUNCT
grj-139	240	144	2019	2019	NUM
grj-139	240	145	)	)	PUNCT
grj-139	240	146	.	.	PUNCT
grj-139	241	1	genebank	genebank	PROPN
grj-139	241	2	genomics	genomic	NOUN
grj-139	241	3	reveals	reveal	VERB
grj-139	241	4	the	the	DET
grj-139	241	5	diversity	diversity	NOUN
grj-139	241	6	of	of	ADP
grj-139	241	7	a	a	DET
grj-139	241	8	global	global	ADJ
grj-139	241	9	barley	barley	NOUN
grj-139	241	10	collection	collection	NOUN
grj-139	241	11	.	.	PUNCT
grj-139	242	1	nat	nat	PROPN
grj-139	242	2	.	.	PUNCT
grj-139	243	1	genet	genet	PROPN
grj-139	243	2	51	51	NUM
grj-139	243	3	,	,	PUNCT
grj-139	243	4	319–326	319–326	NUM
grj-139	243	5	.	.	PUNCT
grj-139	244	1	https://doi.org/10.1038/s41588-018-0266-x	https://doi.org/10.1038/s41588-018-0266-x	PROPN
grj-139	244	2	mollinari	mollinari	NOUN
grj-139	244	3	,	,	PUNCT
grj-139	244	4	m.	m.	NOUN
grj-139	244	5	and	and	CCONJ
grj-139	244	6	garcia	garcia	PROPN
grj-139	244	7	,	,	PUNCT
grj-139	244	8	a.	a.	PROPN
grj-139	244	9	a.	a.	PROPN
grj-139	244	10	f.	f.	PROPN
grj-139	244	11	(	(	PUNCT
grj-139	244	12	2019	2019	NUM
grj-139	244	13	)	)	PUNCT
grj-139	244	14	.	.	PUNCT
grj-139	245	1	linkage	linkage	NOUN
grj-139	245	2	analysis	analysis	NOUN
grj-139	245	3	and	and	CCONJ
grj-139	245	4	haplotype	haplotype	NOUN
grj-139	245	5	phasing	phase	VERB
grj-139	245	6	in	in	ADP
grj-139	245	7	experimental	experimental	ADJ
grj-139	245	8	autopolyploid	autopolyploid	ADJ
grj-139	245	9	populations	population	NOUN
grj-139	245	10	with	with	ADP
grj-139	245	11	high	high	ADJ
grj-139	245	12	ploidy	ploidy	ADJ
grj-139	245	13	level	level	NOUN
grj-139	245	14	using	use	VERB
grj-139	245	15	hidden	hidden	ADJ
grj-139	245	16	markov	markov	NOUN
grj-139	245	17	models	model	NOUN
grj-139	245	18	.	.	PUNCT
grj-139	246	1	genes	gene	NOUN
grj-139	246	2	,	,	PUNCT
grj-139	246	3	genomes	genome	NOUN
grj-139	246	4	,	,	PUNCT
grj-139	246	5	genetics	genetic	NOUN
grj-139	246	6	3(10	3(10	NUM
grj-139	246	7	)	)	PUNCT
grj-139	246	8	,	,	PUNCT
grj-139	246	9	3297–3314	3297–3314	NUM
grj-139	246	10	.	.	PUNCT
grj-139	247	1	https://doi.org/10.1534/g3.119.400378	https://doi.org/10.1534/g3.119.400378	PROPN
grj-139	247	2	mollinari	mollinari	PROPN
grj-139	247	3	,	,	PUNCT
grj-139	247	4	m.	m.	NOUN
grj-139	247	5	,	,	PUNCT
grj-139	247	6	olukolu	olukolu	PROPN
grj-139	247	7	,	,	PUNCT
grj-139	247	8	b.	b.	PROPN
grj-139	247	9	a.	a.	PROPN
grj-139	247	10	,	,	PUNCT
grj-139	247	11	gds	gds	PROPN
grj-139	247	12	,	,	PUNCT
grj-139	247	13	p.	p.	PROPN
grj-139	247	14	,	,	PUNCT
grj-139	247	15	khan	khan	PROPN
grj-139	247	16	,	,	PUNCT
grj-139	247	17	a.	a.	NOUN
grj-139	247	18	,	,	PUNCT
grj-139	247	19	gemenet	gemenet	NOUN
grj-139	247	20	,	,	PUNCT
grj-139	247	21	d.	d.	PROPN
grj-139	247	22	,	,	PUNCT
grj-139	247	23	yencho	yencho	PROPN
grj-139	247	24	,	,	PUNCT
grj-139	247	25	g.	g.	PROPN
grj-139	247	26	c.	c.	PROPN
grj-139	247	27	and	and	CCONJ
grj-139	247	28	zeng	zeng	PROPN
grj-139	247	29	,	,	PUNCT
grj-139	247	30	z.	z.	PROPN
grj-139	247	31	(	(	PUNCT
grj-139	247	32	2020	2020	NUM
grj-139	247	33	)	)	PUNCT
grj-139	247	34	.	.	PUNCT
grj-139	248	1	unraveling	unravel	VERB
grj-139	248	2	the	the	DET
grj-139	248	3	hexaploid	hexaploid	PROPN
grj-139	248	4	sweetpotato	sweetpotato	NOUN
grj-139	248	5	inheritance	inheritance	NOUN
grj-139	248	6	using	use	VERB
grj-139	248	7	ultra	ultra	ADJ
grj-139	248	8	-	-	ADJ
grj-139	248	9	dense	dense	ADJ
grj-139	248	10	multilocus	multilocus	NOUN
grj-139	248	11	mapping	mapping	NOUN
grj-139	248	12	.	.	PUNCT
grj-139	249	1	genes	gene	NOUN
grj-139	249	2	,	,	PUNCT
grj-139	249	3	genomes	genome	NOUN
grj-139	249	4	,	,	PUNCT
grj-139	249	5	genetics	genetic	NOUN
grj-139	249	6	3(1	3(1	NUM
grj-139	249	7	)	)	PUNCT
grj-139	249	8	,	,	PUNCT
grj-139	249	9	281–292	281–292	NUM
grj-139	249	10	.	.	PUNCT
grj-139	250	1	https://doi.org/10.1534/g3.119.400620	https://doi.org/10.1534/g3.119.400620	PROPN
grj-139	250	2	putnam	putnam	PROPN
grj-139	250	3	,	,	PUNCT
grj-139	250	4	d.	d.	PROPN
grj-139	250	5	and	and	CCONJ
grj-139	250	6	meccage	meccage	PROPN
grj-139	250	7	,	,	PUNCT
grj-139	250	8	e.	e.	PROPN
grj-139	250	9	(	(	PUNCT
grj-139	250	10	2022	2022	NUM
grj-139	250	11	)	)	PUNCT
grj-139	250	12	.	.	PUNCT
grj-139	251	1	profitable	profitable	ADJ
grj-139	251	2	alfalfa	alfalfa	PROPN
grj-139	251	3	production	production	NOUN
grj-139	251	4	sustains	sustain	VERB
grj-139	251	5	the	the	DET
grj-139	251	6	environment	environment	NOUN
grj-139	251	7	.	.	PUNCT
grj-139	252	1	in	in	ADP
grj-139	252	2	proceedings	proceeding	NOUN
grj-139	252	3	,	,	PUNCT
grj-139	252	4	2022	2022	NUM
grj-139	252	5	world	world	PROPN
grj-139	252	6	alfalfa	alfalfa	PROPN
grj-139	252	7	congress	congress	PROPN
grj-139	252	8	,	,	PUNCT
grj-139	252	9	14	14	NUM
grj-139	252	10	-	-	SYM
grj-139	252	11	17	17	NUM
grj-139	252	12	november	november	PROPN
grj-139	252	13	2022	2022	NUM
grj-139	252	14	,	,	PUNCT
grj-139	252	15	san	san	PROPN
grj-139	252	16	diego	diego	PROPN
grj-139	252	17	,	,	PUNCT
grj-139	252	18	ca	ca	NOUN
grj-139	252	19	.	.	PUNCT
grj-139	253	1	retrieved	retrieve	VERB
grj-139	253	2	from	from	ADP
grj-139	253	3	https://alfalfasymposium.ucdavis.edu/+symposium/proceedings/2022/articles/daniel-putnam-2022-profitable-alfalfa-production-sustains-the-environment.pdf	https://alfalfasymposium.ucdavis.edu/+symposium/proceedings/2022/articles/daniel-putnam-2022-profitable-alfalfa-production-sustains-the-environment.pdf	PROPN
grj-139	253	4	tanksley	tanksley	NOUN
grj-139	253	5	,	,	PUNCT
grj-139	253	6	s.	s.	PROPN
grj-139	253	7	d.	d.	PROPN
grj-139	253	8	(	(	PUNCT
grj-139	253	9	1983	1983	NUM
grj-139	253	10	)	)	PUNCT
grj-139	253	11	.	.	PUNCT
grj-139	254	1	molecular	molecular	ADJ
grj-139	254	2	markers	marker	NOUN
grj-139	254	3	in	in	ADP
grj-139	254	4	plant	plant	NOUN
grj-139	254	5	breeding	breeding	NOUN
grj-139	254	6	.	.	PUNCT
grj-139	255	1	plant	plant	NOUN
grj-139	255	2	mol	mol	ADP
grj-139	255	3	biol	biol	PROPN
grj-139	255	4	rep	rep	PROPN
grj-139	255	5	1	1	NUM
grj-139	255	6	,	,	PUNCT
grj-139	255	7	3–8	3–8	NUM
grj-139	255	8	.	.	PUNCT
grj-139	256	1	https://doi.org/10.1101/2023.02.12.528172	https://doi.org/10.1101/2023.02.12.528172	PROPN
grj-139	256	2	telfer	telfer	PROPN
grj-139	256	3	,	,	PUNCT
grj-139	256	4	e.	e.	PROPN
grj-139	256	5	,	,	PUNCT
grj-139	256	6	graham	graham	PROPN
grj-139	256	7	,	,	PUNCT
grj-139	256	8	n.	n.	PROPN
grj-139	256	9	,	,	PUNCT
grj-139	256	10	macdonald	macdonald	PROPN
grj-139	256	11	,	,	PUNCT
grj-139	256	12	l.	l.	PROPN
grj-139	256	13	,	,	PUNCT
grj-139	256	14	li	li	PROPN
grj-139	256	15	,	,	PUNCT
grj-139	256	16	y.	y.	PROPN
grj-139	256	17	,	,	PUNCT
grj-139	256	18	klápště	klápště	PROPN
grj-139	256	19	,	,	PUNCT
grj-139	256	20	j.	j.	PROPN
grj-139	256	21	,	,	PUNCT
grj-139	256	22	resende	resende	PROPN
grj-139	256	23	,	,	PUNCT
grj-139	256	24	m.	m.	NOUN
grj-139	256	25	,	,	PUNCT
grj-139	256	26	neves	neve	NOUN
grj-139	256	27	,	,	PUNCT
grj-139	256	28	l.	l.	PROPN
grj-139	256	29	g.	g.	PROPN
grj-139	256	30	,	,	PUNCT
grj-139	256	31	dungey	dungey	PROPN
grj-139	256	32	,	,	PUNCT
grj-139	256	33	h.	h.	PROPN
grj-139	256	34	and	and	CCONJ
grj-139	256	35	wilcox	wilcox	PROPN
grj-139	256	36	,	,	PUNCT
grj-139	256	37	p.	p.	NOUN
grj-139	256	38	(	(	PUNCT
grj-139	256	39	2019	2019	NUM
grj-139	256	40	)	)	PUNCT
grj-139	256	41	.	.	PUNCT
grj-139	257	1	a	a	DET
grj-139	257	2	high	high	ADJ
grj-139	257	3	-	-	PUNCT
grj-139	257	4	density	density	NOUN
grj-139	257	5	exome	exome	NOUN
grj-139	257	6	capture	capture	NOUN
grj-139	257	7	genotype	genotype	NOUN
grj-139	257	8	-	-	PUNCT
grj-139	257	9	by	by	ADP
grj-139	257	10	-	-	PUNCT
grj-139	257	11	sequencing	sequence	VERB
grj-139	257	12	panel	panel	NOUN
grj-139	257	13	for	for	ADP
grj-139	257	14	forestry	forestry	NOUN
grj-139	257	15	breeding	breeding	NOUN
grj-139	257	16	in	in	ADP
grj-139	257	17	pinus	pinus	NOUN
grj-139	257	18	radiata	radiata	NOUN
grj-139	257	19	.	.	PUNCT
grj-139	258	1	plos	plos	PROPN
grj-139	258	2	one	one	NUM
grj-139	258	3	14(9	14(9	NUM
grj-139	258	4	)	)	PUNCT
grj-139	258	5	,	,	PUNCT
grj-139	258	6	222640	222640	NUM
grj-139	258	7	.	.	PUNCT
grj-139	259	1	https://doi.org/10.1371/journal.pone.0222640	https://doi.org/10.1371/journal.pone.0222640	PROPN
grj-139	259	2	undersander	undersander	PROPN
grj-139	259	3	,	,	PUNCT
grj-139	259	4	d.	d.	PROPN
grj-139	259	5	(	(	PUNCT
grj-139	259	6	2021	2021	NUM
grj-139	259	7	)	)	PUNCT
grj-139	259	8	.	.	PUNCT
grj-139	260	1	economic	economic	ADJ
grj-139	260	2	importance	importance	NOUN
grj-139	260	3	,	,	PUNCT
grj-139	260	4	practical	practical	ADJ
grj-139	260	5	limitations	limitation	NOUN
grj-139	260	6	to	to	ADP
grj-139	260	7	production	production	NOUN
grj-139	260	8	,	,	PUNCT
grj-139	260	9	management	management	NOUN
grj-139	260	10	,	,	PUNCT
grj-139	260	11	and	and	CCONJ
grj-139	260	12	breeding	breeding	NOUN
grj-139	260	13	targets	target	NOUN
grj-139	260	14	of	of	ADP
grj-139	260	15	alfalfa	alfalfa	NOUN
grj-139	260	16	.	.	PUNCT
grj-139	261	1	in	in	ADP
grj-139	261	2	the	the	DET
grj-139	261	3	alfalfa	alfalfa	NOUN
grj-139	261	4	genome	genome	NOUN
grj-139	261	5	,	,	PUNCT
grj-139	261	6	compendium	compendium	NOUN
grj-139	261	7	of	of	ADP
grj-139	261	8	plant	plant	NOUN
grj-139	261	9	genomes	genome	NOUN
grj-139	261	10	(	(	PUNCT
grj-139	261	11	yu	yu	PROPN
grj-139	261	12	,	,	PUNCT
grj-139	261	13	l	l	NOUN
grj-139	261	14	x	x	X
grj-139	261	15	and	and	CCONJ
grj-139	261	16	kole	kole	PROPN
grj-139	261	17	,	,	PUNCT
grj-139	261	18	c	c	PROPN
grj-139	261	19	,	,	PUNCT
grj-139	261	20	eds	eds	PROPN
grj-139	261	21	.	.	PUNCT
grj-139	261	22	)	)	PUNCT
grj-139	261	23	(	(	PUNCT
grj-139	261	24	cham	cham	PROPN
grj-139	261	25	:	:	PUNCT
grj-139	261	26	springer	springer	NOUN
grj-139	261	27	)	)	PUNCT
grj-139	261	28	,	,	PUNCT
grj-139	261	29	1	1	NUM
grj-139	261	30	-	-	SYM
grj-139	261	31	11	11	NUM
grj-139	261	32	.	.	PUNCT
grj-139	262	1	https://doi.org/10.1007/978-3-030-74466-3_1	https://doi.org/10.1007/978-3-030-74466-3_1	X
grj-139	263	1	wang	wang	PROPN
grj-139	263	2	,	,	PUNCT
grj-139	263	3	n.	n.	PROPN
grj-139	263	4	,	,	PUNCT
grj-139	263	5	yuan	yuan	NOUN
grj-139	263	6	,	,	PUNCT
grj-139	263	7	y.	y.	PROPN
grj-139	263	8	,	,	PUNCT
grj-139	263	9	wang	wang	PROPN
grj-139	263	10	,	,	PUNCT
grj-139	263	11	h.	h.	PROPN
grj-139	263	12	,	,	PUNCT
grj-139	263	13	yu	yu	PROPN
grj-139	263	14	,	,	PUNCT
grj-139	263	15	d.	d.	PROPN
grj-139	263	16	,	,	PUNCT
grj-139	263	17	liu	liu	PROPN
grj-139	263	18	,	,	PUNCT
grj-139	263	19	y.	y.	PROPN
grj-139	263	20	,	,	PUNCT
grj-139	263	21	zhang	zhang	PROPN
grj-139	263	22	,	,	PUNCT
grj-139	263	23	a.	a.	PROPN
grj-139	263	24	,	,	PUNCT
grj-139	263	25	gowda	gowda	PROPN
grj-139	263	26	,	,	PUNCT
grj-139	263	27	m.	m.	NOUN
grj-139	263	28	,	,	PUNCT
grj-139	263	29	nair	nair	NOUN
grj-139	263	30	,	,	PUNCT
grj-139	263	31	s.	s.	PROPN
grj-139	263	32	k.	k.	PROPN
grj-139	263	33	,	,	PUNCT
grj-139	263	34	hao	hao	PROPN
grj-139	263	35	,	,	PUNCT
grj-139	263	36	z.	z.	PROPN
grj-139	263	37	,	,	PUNCT
grj-139	263	38	lu	lu	PROPN
grj-139	263	39	,	,	PUNCT
grj-139	263	40	y.	y.	PROPN
grj-139	263	41	,	,	PUNCT
grj-139	263	42	vincente	vincente	PROPN
grj-139	263	43	,	,	PUNCT
grj-139	263	44	f.	f.	PROPN
grj-139	263	45	s.	s.	PROPN
grj-139	263	46	,	,	PUNCT
grj-139	263	47	prasanna	prasanna	PROPN
grj-139	263	48	,	,	PUNCT
grj-139	263	49	b.	b.	PROPN
grj-139	263	50	m.	m.	PROPN
grj-139	263	51	,	,	PUNCT
grj-139	263	52	li	li	PROPN
grj-139	263	53	,	,	PUNCT
grj-139	263	54	x.	x.	PROPN
grj-139	263	55	and	and	CCONJ
grj-139	263	56	zhang	zhang	PROPN
grj-139	263	57	,	,	PUNCT
grj-139	263	58	x.	x.	PROPN
grj-139	263	59	(	(	PUNCT
grj-139	263	60	2020	2020	NUM
grj-139	263	61	)	)	PUNCT
grj-139	263	62	.	.	PUNCT
grj-139	264	1	applications	application	NOUN
grj-139	264	2	of	of	ADP
grj-139	264	3	genotyping	genotyping	NOUN
grj-139	264	4	-	-	PUNCT
grj-139	264	5	by	by	ADP
grj-139	264	6	-	-	PUNCT
grj-139	264	7	sequencing	sequence	VERB
grj-139	264	8	(	(	PUNCT
grj-139	264	9	gbs	gbs	NOUN
grj-139	264	10	)	)	PUNCT
grj-139	264	11	in	in	ADP
grj-139	264	12	maize	maize	NOUN
grj-139	264	13	genetics	genetic	NOUN
grj-139	264	14	and	and	CCONJ
grj-139	264	15	breeding	breeding	NOUN
grj-139	264	16	.	.	PUNCT
grj-139	265	1	sci	sci	PROPN
grj-139	265	2	rep	rep	PROPN
grj-139	265	3	10	10	NUM
grj-139	265	4	.	.	PUNCT
grj-139	266	1	https://doi.org/10.1038/s41598-020-73321-8	https://doi.org/10.1038/s41598-020-73321-8	PROPN