Title


Indonesian Journal of Environmental
Management and Sustainability
e-ISSN:2598-6279 p-ISSN:2598-6260

Research Paper

Potential Application of Consortium Microbe from Sea Cucumber Intestinal

Symbiont as Preservatives for Vaname Shrimp

Marwa Irfan Hanif1, Delianis Pringgenies1*, Gunawan Widi Santosa1, Ervia Yudiati1, Ali Djunaedi1, Koesoemadj1,

1Department of Marine Science, Faculty of Fisheries and Marine Science, Diponegoro University, Semarang, Indonesia

*Corresponding author e-mail: pringgenies@yahoo.com

Abstract
Vaname shrimp is one of the most profitable export commodities in Indonesia. However, the shrimp meat undergoes rapid
quality degradation when shipped without any preservatives. This is an issue since the preservatives commonly found on the
market are formalin-based. This study aims to discover a natural preservative solution by utilizing microbes. The objective of
the study is to discover natural preservatives made of symbiont microbe in sea cucumber’s intestinal organ by antimicrobial
activity screening. Sea cucumber samples were collected from Bandengan waters of Jepara. There are 3 symbiotic microbe
form intestinal cucumber that can inhibit the growth from Bacillus cereus and Pseudomonas aeruginosa. These three
microbes are Listeria sp., Staphylococcus sp., and Rothia sp. Consequently, tested microbial samples were prepared into a
consortium microbe and were tested further as a preservative agent for shrimp with a positive control parameter (cooling).
The observations conducted in this study include organoleptic properties, acidity, total colony, proximate test (protein, water,
ash, fat, and carbohydrate contents), and Total Volatile Base-Nitrogen (TVBN). The results found 3 active isolates are
synergic one to each other as a bacterial consortium. Acidity test of sample extract treatment measured a pH of 7.44,
compared to the non-treatment result of 7.14. Organoleptic test results of the shrimp indicated that the shrimp was acceptable
for consumption. Proximate test of the treatment did not show a significant difference compared to the positive control
treatment. Total colony and TVBN test on treated samples resulted in 48 x 105 CFU/ml and 39.62 mgN% respectively,
whereas a similar test on non-treatment sample showed 119 x 105 CFU/ml and 45.31 mgN% respectively. It was concluded
that the extract of sea cucumber symbiont microbe consortium showed potency in preventing meat quality degradation in
shrimp, although treatment by freezing still produces a better result.

Keywords
Microbial Symbiont, Preservative, Sea Cucumber

Received: 14 Agustus 2019, Accepted: 27 September 2019

https://doi.org/10.26554/ijems.2019.3.3.106-111

1. INTRODUCTION

Food decay is known as food degradation in normal storage
(Buckle et al., 2007). According toBarus et al. (2017), one
factor in marine food decay was caused by bacteria with the
growth of bacteria will cause physical and chemical changes
of the food. Ma’ruf (2012), stated that microorganism such
as P. aeruginosa dan B. cereus had cause fish and other
marine food. In this case, one of the important export
commodity in Indonesia with the risk of decay is a product
of vanname shrimp (Wijayanto et al., 2017).

Dealing with preservation in marine food in general such
as frozen, smoking, radiation or food preservative additives.
But this food preservation (radiation and frozen) will have
a high operational cause. So that people will prefer to
use low-cost synthetic preservative such as formalin (Goon,

2014). The use of formalin will have a very bad effect on
a human. Formalin will cause irritation and inflammation
in the mouth and esophagus, chest or stomach pain and in
most savior condition is kidney failure. Therefore the option
use of natural food preservation will be needed (Yulisa et al.,
2014).

The marine microbe is one of potential resource for
bioactive component commercialization. Microorganism
with association with a marine organism such sea cucumber
will be able to synthesize secondary metabolite in the host
organism (Pringgenies, 2010). According to Ma’ruf et al.
(2014), sea cucumber genus of Holothuria had been proven as
potential antibacterial ability from its bioactive component.
Antibacterial from Sea cucumber had been effectively had
proven as an antibacterial compound for B. cereus and
P. aeruginosa. Three symbiotic bacteria from intestine

https://doi.org/10.26554/ijems.2019.3.3.106-111


Hanif et. al. Indonesian Journal of Environmental Management and Sustainability, 3 (2019) 106-111

of sea cucumber that are Listeria sp., Staphylococcus sp.,
and Rothia sp. had antibacterial activity against these two
contaminant microbes Pringgenies et al. (2018).

A consortium of bacteria is a community that had a
more significant effect than a single isolate (Asri and Zulaika,
2016). Symbiotic bacteria consortium from the intestine of
sea cucumber has the antibacterial capability for B. cereus
and which will inhibit microbial contaminant which can be
used as a natural preservative.

2. EXPERIMENTAL SECTION

2.1 Material
The material used in the research was the three isolate of
bacteria symbion, vanname shrimp (Liptopenaeus vannamei)
for experiment test, Zobell 2216 E medium, and some other
chemical reagent for proximate and TVBN test. equipment
used for the research is oven, furnace, Kjeldahl flask, soxhlet,
incubator, Conway disk, autoclave, and laminar airflow.

2.2 Synergistic test among symbiotic bacteria
Listeria sp., Staphylococcus sp., and Rothia sp. from the
intestine of sea cucumber tested for the synergistic test. One
ose symbiotic bacteria isolate had been applied on top of
each other in the Zobell 2216 E medium. The sample was
incubated for 24 hours and observed. If there is no inhibition
zone, the isolate was synergistic one to each other in the
consortium (Asri and Zulaika, 2016).

2.3 Isolation of Secondary Metabolite
Isolate of symbiotic bacteria consortium was grown as a
starter on 10 ml liquid Zobell medium in 15 ml reaction
tube and shook in 120 rpm speed for 3-5 days until its reach
stationary phase. Isolate the moved into 40 ml liquid Zobell
media the shook for 3-5 days with 120 rpm speed. Culture of
bacteria move into 50 ml centrifuge tube and centrifuge with
2800 G-force speed for 15 minutes to produce supernatant
(Rau et al., 2008).

2.4 Preservation test of Bacterial Consortium Su-
pernatant in Vanname Shrimp

The supernatant extract of the bacterial consortium was
tested on vanname shrimp (L. vannamei ). Preservation
test divides into five control that is cooling (ES), bacterial
supernatant (3C), sterile seawater (AS), sterile medium
(MS), and without treatment (N). Vanname shrimp shocked
with all treatment for 10 hours (Putra and Mirdhayati,
2009).

2.4.1 Tested Parameters
1 pH (Santoso, 2017).
2 Total Plate Count (Sitakar et al., 2016).
3 Organoleptic (SNI 01-2728.1-2006)
4 Proximate:

Water (SNI 01-2354.2-2006)
Ash (SNI 23541-2010)

Fat (SNI 01-2354.3-2006)
Protein (SNI 01-2354.4-2006).
Karbohidrat Atma (2018).

5 Total Volatile Base-Nitrogen (TVBN) (SNI 01-2354.8-
2009).

3. RESULTS AND DISCUSSION

3.1 Synergistic test Among Bacteria
Result of the symbiotic bacterial synergistic test showed no
inhibition zone formed. Meaning that the three symbiotic
bacteria isolate were synergistic one to each other as a
bacterial consortium. Synergic bacteria to form a consortium
will give optimum result than a single isolate of bacteria. The
factor of bacteria isolates to form synergism to one another
still unknown. Some factor could effect of synergism are 1.
synergism in the nutrition synthesis, 2. Synergism among
bacteria in undegraded material by other bacteria, 3. One
type of bacteria has the ability to inhibit toxic compound
to other bacteria (Asri and Zulaika, 2016).

Figure 1. Synergistic test Result

3.2 pH Test on Shrimp Preservation
Value of some pH test in the shrimp preservation is on table
1. Based on pH test in shrimp preservation range from 6,46
– 7,77 where according to Purwa et al. (2012), pH ranged
from 6,5 – 7,5 as a suitable pH for contaminant bacteria.
pH value on Treatment on shrimp with extract was 7,44
while on positive control is 7,42.

Table 1. pH Test Result

No. Treatment pH

1 ES 7,42 ± 0,01
2 3C 7,44 ± 0,01
3 AS 7,10 ± 0,01
4 MS 6,46 ± 0.00
5 N 7,14 ± 0,01

According to Harsojo (2008), good pH value for food
should be lower than 5,3 where the possibility of bacteria
contaminant will be minimum. In reality value of pH in
the shrimp product in the market range from 6,6 – 7,5.

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Hanif et. al. Indonesian Journal of Environmental Management and Sustainability, 3 (2019) 106-111

Meaning that is neutral and nonacid for human, but it is a
good condition for bacteria contaminant.

3.3 Total Colony Test of Contaminant Bacteria (TPC)
Result of total colony count in shrimp preservation as in
table 2.

Table 2. Total Bacteria Count

No. Treatment
Bacteria Colony
Value (CFU/ml)

1 ES 19 x 105
2 3C 48 x 105
3 AS 114 x 105
4 MS 82 x 105
5 N 119 x 105

Result of TPC in positive control (cooling) has value
19 x 105 CFU/ml, while in the supernatant value is 48
x 105 CFU/ml. This two value is are much lower than
shrimp without any treatment that is 119 x 105 CFU/ml.
Result of TPC of all treatment is above the standard of
5 x 105 CFU/ml. But, according to Purwa et al. (2012)
based on Directorate General of Food and Drug. Value of
TPC in food product should be about 50 x 105 CFU/ml
and above this number is not suitable for consumption.
Based on result shrimp with treatment in ES and 3C is
still suitable for consumption. Value of TPC is affected
by the initial bacteria amount (Sukmawati and Hardianti,
2018). According to Harsojo (2008), the value of bacterial
contaminant in the shrimp product in the market is 10 – 58
x 105. Value of negative control indicates that sterile media
and sterile seawater will not effect on bacteria supernatant
extract.

3.4 Organoleptic Test on Shrimp Preservation
Result of organoleptic test based on 10 respondent as in table
3. Organoleptic tests were carried out by 10 respondents
with a range of values 1-9. The evaluation points observed
were shrimp appearance, shrimp smell, and shrimp texture.
The highest organoleptic value was obtained by ES shrimp
and the lowest was by shrimp N (without treatment). Based
on SNI 01-2728.1-2006 if the average organoleptic value is
must be lower than 7, if the organoleptic value of the shrimp
under that value, the shrimp is not suitable for consumption.
Untreated shrimp (N) has a value of 5.70. So, based on the
quality standards the shrimp is not suitable for consumption.
While the organoleptic value of shrimp with other treatments
is more than 7.

3.5 Water and Protein Content Test
The results of the water and protein content in the shrimp
product shows as in Table 4. The highest value of water con-
tent is found in N shrimp with a value of 78.73% where this
value is directly proportional to bacterial colonies number in

Table 3. Organoleptic Test Result

No. Treatment Organoleptic Value

1 ES 8,53
2 3C 7,77
3 AS 7,37
4 MS 7,43
5 N 5,70

shrimp N which is as much as 119 x 105 CFU / ml. The ex-
cess water content in the material will cause the material to
be easily overgrown by contaminant bacteria. This is similar
to Bawinto et al. (2015) the content of excess water content
in a material can cause food to become rapidly damaged
because it is used as a microorganisms growth’s medium.
Shrimp with extracts or 3C shrimp have an average wa-
ter content value so that bacterial growth in shrimp 3C is
minimum. However, the water content in the ES positive
control was noted to be high, this was probably due to the
ice melting and seeping into the shrimp meat. The lowest
value of water content is found in AS shrimp where it is
estimated that immersion in sterile seawater will cause the
liquid in the shrimp to come out to a higher concentration.
The value of protein content will also affect the number of
contaminant bacteria that grow and cause the decay path
faster. The highest value of protein content is found in AS
shrimp. High levels of protein result in reduced water con-
tent in shrimp, this may also be a factor why the AS water
content is the lowest. According to Yuarni et al. (2015),
the high protein content will result in increased bacterial
growth because protein is an important nutrient for bacteria.
So this factor is what causes the total value of colonies in
AS shrimp to be very high. The value of protein content
in 3C shrimp is not much different from the value in the
positive control ES shrimp where the value of both includes
the average value. Overall the value of shrimp protein levels
still meets the quality standard of more than 15%.

Table 4. Add caption

No. Treatment Water (%) Protein (%)

1 ES 78,15 18,69
2 3C 77,77 18,45
3 AS 76,57 19,41
4 MS 78,27 17,26
5 N 78,73 17,78

3.6 Fat and Ash Content Test
The value of fat content and an ash content of shrimp in
each treatment as in Table 5. Fat content in shrimp samples
from three samples of ES, 3C, and AS shrimp still showed
values that were suitable with existing quality standards.

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Hanif et. al. Indonesian Journal of Environmental Management and Sustainability, 3 (2019) 106-111

According to Fendjalang (2018), the fat content in fishery
products ranges from 1.00 - 1.40%. The value of fat content
in MS and N shrimp is less than 1.00%, this is probably due
to the high water content in these two shrimp. Khasrad and
Arfal (2016) mention that the low level of fat in food caused
by high water content. Contaminant bacteria will also play
a role in changing the conditions of fat in a substance. The
value of ash content obtained in this study shows that the ash
content in MS shrimp samples exceeds the existing quality
standard. The value of ash content in fishery products must
be lower than 2%. According to Erni et al. (2018), high
ash content can also cause by the high temperature and
duration of drying in a test material.

Table 5. Fat and Ash Content Test Result

No. Treatment Fat (%) Ash (%)

1 ES 1,05 0,91
2 3C 1,15 1,49
3 AS 1,10 1,67
4 MS 0,86 2,44
5 N 0,94 1,16

Table 6. Carbohydrate Content Calculation Result

No. Treatment Carbohydrate (%)

1 ES 1,20
2 3C 1,17
3 AS 1,25
4 MS 1,17
5 N 1,39

3.7 Carbohydrate Content Calculation
Carbohydrate content was calculated using the by differ-
ence method as in Table 6. Calculation by difference is
a gross calculation that subtracts 100% with the value of
other chemical content so that crude fiber will be included
in the counting (Suptijah, 2012). The highest carbohydrate
value is in the N sample then AS, while the ES, 3C, and MS
samples are lower than that number. High carbohydrate
values can be an indicator of the high growth of contaminant
bacteria. According to Andarti and Wardani (2015), carbo-
hydrates are a source of energy for the body and a simple
form of carbohydrates can be used as an energy source for
contaminant bacteria growth.

3.8 TVBN (Total Volatile Base-Nitrogen) Test
Result of TVBN in each treatment shows as in table 7. The
results of TVBN values in shrimp are directly proportional to
the total value of colonies of contaminant bacteria in shrimp
as in figure 2. TVBN or Total Volatile Base-Nitrogen is a
measurement of volatile material in a substance (Tapotubun

Figure 2. Comparison Between TVBN and Total Colony

Table 7. TVBN Test Result

No. Treatment Nilai TVB-N (mgN%)

1 ES 36,30
2 3C 39,32
3 AS 44,49
4 MS 43,95
5 N 45,31

and Laouhenapessy, 2008). As the graph in figure 2, the
more total contaminant bacterial colonies will increase the
value of TVBN in the sample. This was since contaminant
bacteria will accelerate the formation of enzymes that func-
tion as protein degradation. Farahita et al. (2012) opine
that the process of TVB occurs due to the work of prote-
olytic enzymes that break protein bonds and the result in
this degradation will produce a number of volatile bases
such as ammonia, H2S, and foul-smelling trimethylamine.
Enzymes roles in degradation down proteins are produced
by bacterial activity.

4. CONCLUSIONS

Three isolates of symbiotic bacteria from sea cucumber
Lister sp., Staphylococcus sp., and Rothia sp. have synergic
one to another. Supernatant Extract of the three bacterial
consortia has a significant potential for shrimp product
preservation compared to nontreatment. Result of positive
control using cooling treatment still give a better result.

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	INTRODUCTION
	EXPERIMENTAL SECTION
	Material
	Synergistic test among symbiotic bacteria
	Isolation of Secondary Metabolite
	Preservation test of Bacterial Consortium Supernatant in Vanname Shrimp
	Tested Parameters


	RESULTS AND DISCUSSION
	Synergistic test Among Bacteria
	pH Test on Shrimp Preservation
	Total Colony Test of Contaminant Bacteria (TPC)
	Organoleptic Test on Shrimp Preservation
	Water and Protein Content Test
	Fat and Ash Content Test
	Carbohydrate Content Calculation
	TVBN (Total Volatile Base-Nitrogen) Test

	CONCLUSIONS