id	author	title	date	pages	extension	mime	words	sentence	flesch	summary	cache	txt
cord-293890-thfros7x	Carbo, Ellen C.	Coronavirus discovery by metagenomic sequencing: a tool for pandemic preparedness	2020-08-21		.txt	text/plain	2318	88	40	Identification of a Novel Coronavirus in Patients with Severe Acute Respiratory Syndrome A Novel Coronavirus Associated with Severe Acute Respiratory Syndrome Laboratory validation of a clinical metagenomic sequencing assay for pathogen detection in cerebrospinal fluid VIP: an integrated pipeline for metagenomics of virus identification and discovery Metagenomics for pathogen detection in public health Genome Detective: an automated system for virus identification from highthroughput sequencing data Virome Capture Sequencing Enables Sensitive Viral Diagnosis and Comprehensive Virome Analysis', mBio Enhanced virome sequencing using targeted sequence capture Detection of 2019 novel coronavirus (2019-nCoV) by real-time RT-PCR Mechanisms and enzymes involved in SARS coronavirus genome expression Isolation of a Novel Coronavirus from a Man with Pneumonia in Saudi Arabia Retrospective Validation of a Metagenomic Sequencing Protocol for Combined Detection of RNA and DNA Viruses Using Respiratory Samples from Pediatric Patients The respiratory virome and exacerbations in patients with chronic obstructive pulmonary disease Fast gapped-read alignment with Bowtie 2 Centrifuge: rapid and sensitive classification of metagenomic sequences Interactive metagenomic visualization in a Web browser SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing Basic local alignment search tool Trimmomatic: a flexible trimmer for Illumina sequence data Fast and sensitive protein alignment using DIAMOND metaSPAdes: a new versatile metagenomic assembler The efficacy of a metagenomic sequencing protocol using capture probes targeting vertebrate virus sequences designed before the emergence of SARS-CoV-2, was studied in the context of virus discovery.	cache/cord-293890-thfros7x.txt	txt/cord-293890-thfros7x.txt
