Nepal Journal of Biotechnology. D e c .  2 0 1 9  Vol. 7, No. 1: 96-102   DOI: https://doi.org/10.3126/njb.v7i1.26949 

©NJB, Biotechnology Society of Nepal  96 Nepjol.info/index.php/njb. 

REVIEW ARTICLE 

 

Infectious Sources of Histoplasmosis and Molecular 
Techniques for its Identification  

Sudip Bhandari1, Binod Rayamajhee2, Laxmi Dhungel1, Sami Poudel1, Bhagwati Gaire1,  

Sunil Shrestha1, Niranjan Parajuli3* 

1Department of Biotechnology, National College, Tribhuvan University, Kathmandu, Nepal 
2Department of Infectious Diseases and Immunology, Kathmandu Research Institute for Biological 

Sciences (KRIBS), Lalitpur, Nepal 
3Central Department of Chemistry, Tribhuvan University, Kathmandu, Nepal 

Abstract 
Histoplasmosis, a fungal infection caused by Histoplasma capsulatum (H. capsulatum), acquired 
from contaminated soil with droppings of chicken or birds and found to be distributed in many 
parts of the world. The prevalence of histoplasmosis has not well studied in Nepal. The common 
symptoms of acute and epidemic histoplasmosis include high fever, cough, and asthenia and 
weight loss.  Most of the infections associated with histoplasmosis are asymptomatic. People with 
compromised immune systems such as HIV/AIDS (PLWHA), cancer, and organ transplant 
recipients are at risk of developing this disease. In this review, we have summarised the current 
status of histoplasmosis in Nepal and molecular techniques available for its identification. To date, 
the significant outbreak is not reported in Nepal, but the risk of infection for the vulnerable 
population cannot be undermined. Appropriate preventive measures and treatment on time can 
reduce the burden of this fungal disease. Further, this review is also focused on molecular 
identification of H. capsulatum. Hence, careful considerations by concerned stakeholders for 
national surveillance programs and the treatment of patients on time after proper diagnosis is 
highly recommended.  
Keywords: Histoplasmosis, asymptomatic, vulnerable, treatment 

*Corresponding author: 

Email:  nparajuli@cdctu.edu.np 

Introduction  
Histoplasmosis is acquired by inhalation of 

spores of H. capsulatum, which is usually found 

in the soil contaminated by bird droppings, 

which reveals the higher risk of disease in 

farmers, gardeners, poultry keepers, 

construction workers, pest control workers and 

in some instances travelers visiting caves and 

tunnels[1]. Histoplasma is a dimorphic fungus, 

which produces mycelial form in the soil 

environment and converts to the yeast form at 

host body temperature (37 °C), and it usually 

does not develop the symptomatic infection. So 

people need not concern about the infection [2]. 

However, for immune-compromised people, 

the fungus can result in severe infection. Very 

young children and elderly people who have a 

weak immune system; are more likely to get 

histoplasmosis disease [3]. 

The development of infection and the 

dissemination of H. capsulatum are initially 

dependent on the condition of the host body[4]. 

The majority of infected persons could have 

either no symptoms or a very less mild sickness, 

which is hard to recognize as the cause of 

histoplasmosis [5]. The clinical symptoms 

generally occur only in a small number (around 

1%) of the population when exposed with H. 

capsulatum spores [6]. Persons who are usually 

immuno-compromised and are unable to 

develop effective cell-mediated response are 

likely to develop symptomatic disease during 

the period of acute dissemination in body [5], 

which includes infant child, patients with 

HIV/AIDS, organ transplant recipients, and 

those with hematologic deficiencies, and also 

those patients, who are on corticosteroids drugs 

treatment [7]. An individual is under the risk of 

developing symptoms even after years leaving 

the endemic vicinity of histoplasmosis if the 

man or woman was in an immuno-suppressive 

situation at that time [8]. Histoplasmosis is of 

four major types: pulmonary histoplasmosis, 

progressive disseminated histoplasmosis, 



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cutaneous histoplasmosis, and African 

histoplasmosis [9, 10]. 

Pathogenesis of Histoplasmosis 
The fungal infection starts after the inhalation of 

spores produced by the mycelial form of H. 

capsulatum and the spores deposited inside the 

alveoli of the lungs [11]. After some time, the 

spores start to germinate inside the alveoli at 

normal body temperature to become dimorphic 

form. Then pulmonary macrophages engulf that 

yeast form of dimorphic fungus [12]. After the 

engulfment, the yeasts become a parasite and 

multiply within the alveolar cells, then travel to 

hilar and mediastinal lymph nodes [13]. When 

yeast form fungus gets access to the blood 

circulation system, then disseminates more 

rapidly and swiftly across various organs of the 

body. About after two weeks of exposure, the 

macrophages become fully fungicidal, then the 

cellular immunity starts a defense against the 

fungal particles [14]. It leads to necrosis at the 

site of infection like in the lungs, liver, spleen, 

lymph nodes, and on bone marrow, adrenal 

glands, and mucocutaneous membranes, which 

results in progressive disseminated 

histoplasmosis [4] as shown in Figure 1. The 

progressive type of histoplasmosis is much 

more lethal and severe as compared to other 

kinds of histoplasmosis [15]. 

Epidemiology 
Histoplasmosis is distributed worldwide, but 

incidence cases are often reported around the 

periphery of river valleys [16]. The majority of 

infections in humans are reported from the 

central United States, whereas the small number 

of cases are also reported from  Brazil, 

Argentina, India, and South Africa [17]. 

Currently, due to an increase in the occurrence 

of histoplasmosis worldwide, scientists have 

been developing several diagnostic strategies. 

Histoplasmosis endemicity can be evaluated by 

population-based use of a histoplasmosis skin 

test [18]. The skin test was found to be useful 

when a major endemic area of histoplasmosis 

identified in the north-eastern and Midwestern 

United States [19]. 

Increased number of infectious diseases like 

histoplasmosis is being reported in areas where 

it was previously not thought to be prevalent, 

and the changing distribution of infectious 

diseases can become an important step to guide 

diagnostic workup and direct public health 

awareness [17]. Notably, in tuberculosis-

endemic regions, disseminated histoplasmosis 

can easily be misdiagnosed as tuberculosis 

because of its similar clinical symptoms and 

must be considered as histoplasmosis infection 

in patients who do not respond to empiric anti-

tubercular therapy [20]. 

An estimated discern indicates that nearly 3,000 

people develop kidney failure yearly in Nepal 

[21]. Similarly, there are additionally a high 

number of the population in Nepal with a 

diabetic condition; the 2016 Diabetes Profile has 

shown that 9.1 %of the Nepali people are 

dwellings with diabetes [22]. Likewise, the cases 

of HIV/AIDS is also in excessive number inside 

the country [23]. According to National Centre 

for AIDS and STD Control (Nepal), there 

are around 31,020 HIV/AIDS sufferers in the 

country, and it is estimated to upward thrust at 

a rate of 2 patients per day. Those persons 

having conditions like a diabetic, organ 

transplant, and the person with HIV/AIDS have 

a weak immune system, which means that they 

are at high risk of developing other secondary 

infections like histoplasmosis during their 

lifetime.  

According to the published reports,  the 

geographical distribution of histoplasmosis has 

not been clearly understood [4]. The occurrence 

of histoplasmosis in Asia has not fully 

appreciated until recently. Malaysia is the first 

country in Asia, where H. capsulatum was 

isolated from soil samples [24]. India, a close 

neighboring of Nepal, has also reported a high 

number of histoplasmosis cases in West Bengal 

and Assam till 2018[24]. From, 1995 to 2018, 

about 388 cases of H. capsulatum has been 

reported, and the number is in increasing order 

in India [24]. In recent years, an increasing 

number of histoplasmosis cases have been 

recognized among HIV-positive and/or 

diabetic patients in India [1]. In case of Nepal, 

histoplasmosis has only been described four 

times, Amatya et al., (2014) reported that the 



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cases of histoplasmosis in an Indian national 

who traveled to Nepal for medical care and once 

in a Nepali citizen, making this the second case 

described in the literature by Subedi et al., (2016) 

[25]. Recently, another case has been published 

by Sharma and Adhikari (2019). According to 

them, a 52 years old man with diabetes shows 

adrenal involvement in histoplasmosis [26]. 

Additionally, one case has reported in a 

Nepalese migrant to the USA with evidence of 

infection being acquired in Nepal by Gandi et 

al., in 2015 [27]. Nepal and India have an open 

border, and a large number of Nepalese 

migrants is directly dependent on Indian 

economic and cultural aspects such as 

employment, education, social relationship, and 

trade among other elements. Such socio-

economic relationship directly has an impact on 

the dissemination of the diseases, including 

histoplasmosis. 

Identification of H. Capsulatum and diagnosis 

of histoplasmosis 

Traditionally, identification of causative agent 

of histoplasmosis is carried out through tissue 

culture or body fluids at 25°C on Sabouraud’s 

dextrose agar to allow the growth of mycelial 

phase of H. capsulatum. For the proper growth of 

mold, it takes about six weeks. After the 

incubation period, two different types of conidia 

are formed. The tuberculate or macroconidia are 

of about 8 – 15 µm in diameter and have a thick 

wall. Similarly, the microconidia are tiny about 

2 -4 µm in diameter and are more infectious 

when compared to the more abundant conidia. 

However, the procedure of culturing is time-

consuming [28]. 

Likewise, histopathological examination is 

another technique for detection of the 

Histoplasma. It is generally done for severely ill 

patients [29]. The method includes tissue 

biopsy. During the histopathological 

observation, other organisms also could mimic 

the appearance like that of H. capsulatum. So, this 

could be eliminated by using another stain like 

methenamine silver or periodic acid- Schiff 

stains, which visualize H. capsulatum [30]. 

Detection of circulating Histoplasma associated 

antigen in urine and serum is another diagnostic 

option to detect the presence of the fungi using 

an immunological technique like sandwich 

enzyme immunoassay (EIA), and it was first 

described in 1986 [31]. This technique generally 

uses H. capsulatum antigen, which is a 

polysaccharide, a polyclonal rabbit anti-

Histoplasma immunoglobulin G linked to biotin, 

and horseradish peroxidase [4, 18]. The assay 

also shows the highest sensitivity against AIDS 

patients who had disseminated histoplasmosis 

[9].  

Antibody tests are also performed to detect 

several forms of Histoplasma cases. There are 

two standard assays for antibody detection they 

are, (i) complement fixation (CF) test, which is 

based on the use of two separate antigens- yeast 

and mycelial (or histoplasmosis)- and (ii) 

immunodiffusion (ID) assay [32]. The ID assay 

tests generally detect the presence of M and H 

precipitin bands. An M 

band often existing in persistent types of 

histoplasmosis and lasts for many months to 

years after the infection. An H band is also 

indicative of the severe form of histoplasmosis 

[17]. The ID assay is approximately only 80% 

sensitive but is more specific than CF assay 

because in CF assay, cross-reaction may occur 

with other fungal infections like sarcoidosis [33]. 

Molecular identification of Histo-
plasmosis 
In recent days, the molecular approach is widely 

used as a reliable and rapid technique for the 

detection of diseases with higher sensitivity and 

specificity. At present, the use of chemo-

luminescence labeled DNA probe for the 

detection of specific sequences of ribosomal 

RNA (rRNA) has been able to detect and 

confirm all the H. capsulatum isolates from the 

culture [32]. AccuProbe is one of them, which is 

based on the principle of nucleic acid 

hybridization. A single-stranded 

chemiluminescent labeled DNA probe is 

complementary to the sequence of ribosomal 

RNA of fungus.  After the rRNA released from 

fungi, the steady DNA-RNA hybrid formed and 

that hybrids are detected and measured by 

using Hologicluminometer. A positive result is 

given by reading equal to or higher than the 

predetermined cut-off values, and an adverse 



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effect is the cost less than that of cut-off values 

[39].  

Polymerase chain reaction (PCR) 
Assay 
PCR is based on the amplification of the fungal 

gene for identifying mycoses. In2003, Guedes et 

al. designed a nested PCR based technique for 

the rapid detection of fungi. The 

oligonucleotides used in this method is based on 

the M - antigens of H. capsulatum var. capsulatum. 

The oligonucleotidesMsp1F - Msp1R (pair 1) and 

Msp2F - Msp2R (pair 2) results amplicon of size 

111 bp and 279 bp, respectively[34]; (Msp1F: 5′ - 

ACA AGA GAC GAC GGT AGC TTC ACG - 3′ 

andMsp1R: 5′ - GCG TTG GGG ATC AAG CGA 

TGA GCC - 3′), (Msp2F: 5′ - CGG GCC GCG TTT 

AAC AGC GCC - 3′ and Msp2R: 5′ - ACC AGC 

GGC CAT AAG GAC GTC - 3′). The PCR 

reaction was performed with 100ng DNA 

amplified in a 25 µl reaction using 20 pmol of 

oligonucleotides(35 cycles of denaturation, 

annealing, and chain extension) [34].  

By using this protocol,100% specificity and 

accuracy were mentioned in the 31 examined 

strains from the animal, soil, and human [34]. 

The results also confirmed the absence of other 

fungal strains such as H. capsulatum var. 

farciminosum, Paracoccidioides brasiliensis, 

Candida spp., Sporothrix schenckii, Cryptococcus 

neoformans,etc in the amplified products[34]. 

Real-time PCR (RT- PCR) 
The real-time RT-PCR or qPCR shows 

promising results in the diagnosis of 

histoplasmosis infection, which currently 

identified the H. capsulatum among several other 

fungi [35]. Simon et al., (2010) carried out 

research for the detection of H. capsulatum based 

on real-time PCR using the TaqMan probe [36]. 

For this study, specific primers and probe 

(TaqManlabeled with fluorescent dye 6-

carboxyfluorescein at 5′ end and a 

nonfluorescent quencher at the 3′ end) were 

used for the analysis of the internal transcribed 

spacer (ITS) region of the rRNA. The 

oligonucleotides HcITS-167F (5′- 

AACGATTGGCGTCTGAGCAT-3′) and HcITS-

229R (5′-GAGATCCGTTGTTGAAAGTTTTGA-

3′) were used. The following probeHcITS-188P 

5′-6- FAM- AGAGCGATAATAATCC- MGB -3′) 

was used. The specificity of RT- PCR was 

calculated to be 95.4% in comparison to the 

culture method. During the process, there is no 

PCR inhibitor detected. Among the 275 samples 

which were previously reported to be negative 

in culture method, 11 samples were reported as 

positive by RT-PCR with a specificity of 96.0%. 

Similarly, among the 341 samples tested, zero 

nonspecific signals were recorded [36].  

Despite this promising research result, for the 

detection of H. capsulatum in clinical samples, 

there are no currently FDA-approved molecular 

assays available. Moreover, to date, the 

molecular approach for the detection of 

histoplasmosis is in a developing stage. 

Similarly, an improved and reliable technique 

has to be designed as a dependable approach for 

the detection of the disease. Regarding the 

future accessibility of molecular techniques for 

the detection of histoplasmosis is not unclouded 

in resource-limited countries like Nepal [37]. 

Treatment of Histoplasmosis 
Based on the current status, most patients with 

mild acute histoplasmosis limited to lungs will 

be resolved after a month without specific 

treatment. However, the disseminated or the 

severe form of histoplasmosis should be treated 

with antifungal agents[17]. 

The treatment of chronic and severe form of 

pulmonary histoplasmosis is generally done by 

prescribing amphotericin B (3.0–5.0 mg/kg 

daily for 1–2 weeks, intravenously), followed by 

itraconazole (200 mg 3 times per day for 3 days 

and after that 200 mg for two times a day, for a 

total of 3 months) is required and 

recommended[38]. Similarly, for progressive 

disseminated histoplasmosis amphotericin B 

(3.0 mg/kg daily) is recommended for about 7-

15days, which is followed by oral drug 

itraconazole having 200 mg concentration for 

daily three times for three days and after that 

200 mg daily for two times for a total of at least 

a year). Likewise, for the patients with the 

immunosuppressed condition, itraconazole 

daily (200 mg) is recommended as 

prophylaxis[19,38]. 



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Research status of histoplasmosis in 
Nepal 
In Nepal, there is poor hygienic practices and 

sanitation in major parts of the country and is 

offering the home for the continuous emergence 

and re-emergence of several life-threatening 

infectious diseases. So, Histoplasmosis could be 

a serious issue of public health in days to come. 

In Nepal, the majority of the population lives in 

rural areas with minimal health care facilities. 

The burden of the disease is much higher in 

rural settings compared to the urban areas. 

Although the pattern of diseases might change 

regularly, infectious diseases remain the leading 

cause of mortality and morbidity in Nepal. In 

many rural settings, cases of some diseases are 

often identified only through their clinical signs 

and symptoms. Lack of proper public health 

awareness and treatment of infectious diseases 

made people prone to several fungal infections, 

including Histoplasmosis, which may be a 

severe issue [40]. As the pervasiveness of 

HIV/AIDS and Tuberculosis are budding 

swiftly, the infection from the Histoplasma may 

lead to a significant effect [41]. Thus, careful 

diagnosis and treatment on time are paramount 

to control the future outbreaks of 

histoplasmosis. Moreover, the probability of 

undiagnosed histoplasmosis dissemination also 

urges for the need of proper diagnostic 

strategies of Histoplasma spp. infection in Nepal. 

As per institutional information, there is no 

routine examination and treatment of 

histoplasmosis infection in Tribhuvan 

UniversityTeaching Hospital and National 

Public Health Laboratory (NPHL-Nepal), while 

both of them are considered as reference health 

service centres of the country.  

Challenges in Nepal 
As Nepal is under the way of development, the 

budgeting for the health and its related sector is 

very less. Lack of proper investment in the 

health sector for the diagnosis and treatment of 

diseases is a significant problem in Nepal. Death 

of hundreds of people by unknown disease is 

also prevalent. Lack of proper government 

strategies and operative ventures in the health 

sector has been a cardinal cause of those strange 

deaths. Allocation of the budget on the health 

sector is only attentive to the treatment of some 

severe disease, which shows that the country 

has less interest in disease diagnosis. It is one of 

the significant consequences of the death of 

people from unknown conditions. Therefore, 

early diagnosis of histoplasmosis is mandatory 

to reduce the burden of illness.  

Conclusion 
The clear and accurate picture of the 

dissemination of histoplasmosis is complicated 

to understand in the resource-limited clinical 

sector of Nepal. Many factors could contribute 

to this, like lack of proper lab facilities, lack of 

expertise on fungal infections, etc. Additionally, 

not much reliable data are available from the 

government and academia due to incompetence 

in the diagnosis strategies. The published data 

are also in the form of case reports based on a 

hospital visit. It is already emphasized that the 

pockets of endemicity do exist in Nepal, which 

could lead to a significant impact on public 

health. Hence, careful considerations and the 

molecular approach of disease identification 

may be a suitable alternative. To address this 

problem, further research should be done 

immediately in Nepal 

Conflict of Interest  
The authors declare no conflict of interest. 

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