# bib

id: cord-015741-19i8hwn4
title: Contents Vol. 42, 1994
date: 2002-11-14
extension: .txt
mime: text/plain
words: 176
sentence: 5
flesch: 32
cache: cache/cord-015741-19i8hwn4.txt
txt: txt/cord-015741-19i8hwn4.txt
summary:
  Mycoides S.C. (Contagious bovine pleuropneumonia agent) Antibody titers to pseudorabies virus in piglets immunized with glII deleted pseudorabies vaccine in a pseudorabies infected herd F. Elvinger 361 A retrospective study of clinical and laboratory characteristics of ovine footrot Experimental infections of pregnant sows with ovine Ctdaraydia psittaci strains C. Vazquez-Cisneros, A.J. Wilsmore (Potters Bar, UK) and E. Bollo (Torino. Use of bovine myeloperoxidase as an indicator of ma,stitis in dairy cattle R. Cooray (Uppsala, Sweden) Development of a selective polymerase chain reaction assay for the detection of rnycoplasma rnycoides subsp.


id: cord-007463-8g0zklzy
author: Pocock, D.H.
date: 2002-11-13
extension: .txt
mime: text/plain
words: 1939
sentence: 58
flesch: 37
cache: cache/cord-007463-8g0zklzy.txt
txt: txt/cord-007463-8g0zklzy.txt
title:
  Characterisation of rotavirus isolates from sub-clinically infected calves by genome profile analysis

summary:
  Asymptomatic rotavirus infections in day care centers Development of immunity to porcine rotavirus in piglets protected from disease by bovine colostrum Variation in virulence of bovine rotaviruses Neonatal calf diarrhoea: identification of a reoviruslike (rotavirus) agent in faeces by immunofluorescence and immune electron microscopy Comparative virulence of different bovine rotavirus isolates Asymptomatic endemic rotavirus infections in the newborn A rapid and sensitive method for analysing the genome profiles of field isolates of rotavirus Rotavirus infections in calves in dairy herds Quantitation of the relatedness of Reovirus serotypes 1,2 and 3 at the gene level Rapid diagnosis of rotavirus infection by direct detection of viral nucleic acid in silver-stained polyacrylamide gels Comparison of human and animal rotaviruses by gel electropboresis of viral RNA Distinctive ribonueleic acid patterns of human rotavirus subgroups 1 and 2 Cleavage of structural proteins during the assembly of the head of bacteriophage T 4 Longitudinal survey of rotavirus infection in calves Molecular characterization of rotaviruses with distinct group antigens The epidemiology of enteric virus infections of calves Evaluation of ELISA and electron microscopy for the detection of coronavirus and rotavirus in bovine faeces Comparison of the genomes of simian, bovine and human rotaviruses by gel electrophoresis and detection of genomic variation among bovine isolates Rotavirus infection in lambs: studies on passive protection Comparison of atypical rotaviruses from calves, piglets, lambs and man key: cord-007463-8g0zklzy authors: Pocock, D.H. title: Characterisation of rotavirus isolates from sub-clinically infected calves by genome profile analysis date: 2002-11-13 journal: Vet Microbiol DOI: 10.1016/0378-1135(87)90095-2 sha: doc_id: 7463 cord_uid: 8g0zklzy Rotaviruses isolated from 43 sub-clinically infected calves from a single farm were analysed by genome profile analysis.


id: cord-015722-0w3crrf9
author: Fey, H.
date: 2002-12-09
extension: .txt
mime: text/plain
words: 1915
sentence: 117
flesch: 61
cache: cache/cord-015722-0w3crrf9.txt
txt: txt/cord-015722-0w3crrf9.txt
title:
  Proceedings of minisymposium on neonatal diarrhea in calves and pigs: Saskatoon, Sask., 3–4 May 1976. Veterinary Infectious Diseae Organization (VIDO), University of Saskatchewan, Saskatoon, University Publications Office, 1976, 155pp., $5.00, ISBN 0-88880-004-5

summary:
  If an author's name in the list is also mentioned with co-authors the following order should be used: publications of the single author, arranged according to publication dates --puklications of the same author with one co-author --publications of the author with more than one co-author Use the following system t'or arranging your references: a. Other authors presented their recent experiments on E. coil enterotoxins and offered pathogenetic considerations.


id: cord-007495-gpz4gkv3
author: Weiss, M.
title: Antibodies to berne virus in horses and other animals
date: 2002-11-13
extension: .txt
mime: text/plain
words: 2119
sentence: 81
flesch: 45
cache: cache/cord-007495-gpz4gkv3.txt
txt: txt/cord-007495-gpz4gkv3.txt
summary:
  key: cord-007495-gpz4gkv3 authors: Weiss, M.; Steck, F.; Kaderli, R.; Horzinek, M.C. title: Antibodies to berne virus in horses and other animals date: 2002-11-13 journal: Vet Microbiol DOI: 10.1016/0378-1135(84)90014-2 sha: doc_id: 7495 cord_uid: gpz4gkv3 After inoculation into 2 foals, Berne virus induced neutralizing antibody, but did not cause clinical symptoms. Berne virus was shown to be serologically unrelated to known equine viruses as well as to representatives of the 3 main antigenic clusters of the Coronaviridae family (infectious bronchitis, mouse hepatitis and transmissible gastroenteritis viruses), which it resembles superficially in negatively stained preparations.


id: cord-015734-d9h95k6l
title: Author Index, Volumes 98-104
date: 2004-12-09
extension: .txt
mime: text/plain
words: 2402
sentence: 17
flesch: -99
cache: cache/cord-015734-d9h95k6l.txt
txt: txt/cord-015734-d9h95k6l.txt
summary:
  mycoides SC Mycobacterium nonchromogenicum in nasal mucus from cattle in a herd infected with bovine tuberculosis Molecular characterization of porcine TT virus, an orphan virus, in pigs from six different countries Comparison of an interferon-g to a phospholipase D enzyme-linked immunosorbent assay for diagnosis of Corynebacterium pseudotuberculosis infection in experimentally infected goats Intestinal colonisation-inhibition and virulence of Salmonella phoP, rpoS and ompC deletion mutants in chickens Genetic typing of bovine viral diarrhoea virus isolates from India Detection of specific antibodies against deflagellated Salmonella Enteritidis and S. Enteritidis FliCspecific 9 kDa polypeptide Prevalence and epidemiological features of bovine viral diarrhoea virus infection in Lithuania Molecular conservation of MSP4 and MSP5 in Anaplasma marginale and A. centrale vaccine strain Prevalence of Bartonella infection in wild African lions (Panthera leo) and cheetahs (Acinonyx jubatus) Detection of carriers of foot-and-mouth disease virus among vaccinated cattle Comparable sensitivity and specificity in three commercially available ELISAs to differentiate between cattle infected with or vaccinated against foot-and-mouth disease virus Infection of endothelial cells with Anaplasma marginale and A. phagocytophilum Evaluation of a LAM ELISA for diagnosis of paratuberculosis in sheep and goats Pulsed-field gel electrophoresis-based subtyping of DNA degradation-sensitive Salmonella enterica subsp. capripneumoniae, the causative agent of contagious caprine pleuropneumonia (CCPP) Expression of apoptosis-related gene mRNAs in feline T-cells infected with feline immunodeficiency virus (FIV) Experimental dual infection of pigs with an H1N1 swine influenza virus (A/Sw/Hok/2/81) and Mycoplasma hyopneumoniae The effect of maternal antibodies on the detection of bovine virus diarrhoea virus in peripheral blood samples Evaluation of the German cockroach (Blattella germanica) as a vector for verotoxigenic Escherichia coli F18 in confined swine production


id: cord-007456-acbo4zs2
author: Thomas, L.H.
date: 2002-11-13
extension: .txt
mime: text/plain
words: 2800
sentence: 95
flesch: 43
cache: cache/cord-007456-acbo4zs2.txt
txt: txt/cord-007456-acbo4zs2.txt
title:
  Growth of Mycoplasma bovis in organ cultures of bovine foetal trachea and comparison with Mycoplasma dispar

summary:
  key: cord-007456-acbo4zs2 authors: Thomas, L.H.; Howard, C.J.; Parsons, K.R.; Anger, H.S. title: Growth of Mycoplasma bovis in organ cultures of bovine foetal trachea and comparison with Mycoplasma dispar date: 2002-11-13 journal: Vet Microbiol DOI: 10.1016/0378-1135(87)90044-7 sha: doc_id: 7456 cord_uid: acbo4zs2 Inoculation of tracheal organ cultures from bovine foetuses with Mycoplasma bovis resulted in a loss of cellular structure of the lamina propria, followed 20–22 days later by lifting and detachment of overlying epithelium. (1969 Collier et al. ( , 1971 to investigate the effects of M. pneumoniae in organ cultures of hamster trachea, by Cherry and Taylor-Robinson (1970) to study M. mycoides var capri in chicken tracheal organ cultures, by Pijoan et al. (1972) to investigate four porcine mycoplasmas in pig tracheal organ cultures and by Thomas and Howard (1974) to study four bovine mycoplasmas in foetal calf tracheal organ cultures.


id: cord-007461-v3tff2gk
author: Nguyen, T.D.
date: 2002-11-12
extension: .txt
mime: text/plain
words: 2921
sentence: 116
flesch: 52
cache: cache/cord-007461-v3tff2gk.txt
txt: txt/cord-007461-v3tff2gk.txt
title:
  Transmissible gastroenteritis (TGE) of swine: In vitro virus attachment and effects of polyanions and polycations

summary:
  The effect of polycations and polyanions on virus attachment was also examined. Differences in susceptibility to TGEV infection, indicated by plaque formation, between the ST and RPD cells and effects of temperature on virus attachment were studied by incubating virus inoculum with the cells for 30 min at either 4 or 37°C.


id: cord-007491-yxz69nil
author: Weingartl, H.M.
date: 2002-11-13
extension: .txt
mime: text/plain
words: 3250
sentence: 104
flesch: 43
cache: cache/cord-007491-yxz69nil.txt
txt: txt/cord-007491-yxz69nil.txt
title:
  Binding of porcine transmissible gastroenteritis virus by enterocytes from newborn and weaned piglets

summary:
  Aminopeptidase N is a major receptor for the enteropathogenic coronavirus TGEV Studies of transmissible gastroenteritis virus receptors on swine testicle cells Plasma membranes from rat intestinal epithelial cells at different stages of maturation I. Preparation and characterization of plasma membrane subfractions originating from crypt cells and from villous cells Studies on transmissible gastroenteritis of swine II. Extent and dynamics of the epithelial response to virus invasion in transmissible gastroenteritis of piglets Interaction of viruses with cell surface receptors Human and bovine coronaviruses recognize sialic acid-containing receptors similar to those of influenza C viruses Electron microscopy of intestinal epithelial cells of piglets infected with a transmissible gastroenteritis virus Intestinal epithelial cell surface membrane glycoprotein synthesis I.


id: cord-007506-swx3kqob
author: Paul, Prem S.
title: Applications of nucleic acid probes in veterinary infectious diseases
date: 2002-11-13
extension: .txt
mime: text/plain
words: 2887
sentence: 99
flesch: 22
cache: cache/cord-007506-swx3kqob.txt
txt: txt/cord-007506-swx3kqob.txt
summary:
  The diagnosis of swine dysentery using a labeled nucleic acid probe Development of specific nucleic acid probes for the differentiation of porcine rotavirus serotypes Cloning, physical mapping and cross hybridization of the canine adenovirus types 1 and 2 genomes Evaluation ofoligonucleotide probes for identification ofshigalike-toxin-producing Escherichia coli Nucleic acid probes in diagnosis of viral diseases of man DNA probe for the identification ofHistoplasma capsulatum High technology diagnostics: detection of enterotoxigenic Escherchia coli, using DNA probes Polymerase chain reaction amplification ofpseudorabies virus DNA from acutely and latently infected cells Cloning E. coli genes by oligonucleotide hybridization Analysis by RNA-RNA hybridization assay of intertypic rotaviruses suggests that gene reassortment occurs in vivo Hybridization techniques Crohn's diseaseisolated mycobacteria are identical to Mycobacterium paratuberculosis, as determined by DNA probes that distinguish between Mycobacterial species DNA probes to identify and detect Mycobacterium paratuberculosis in clinical and veterinary samples Detection of cell culture mycoplasmas by a genetic probe Identification of enterotoxigenic Escherichia coli by colony hybridization using three enterotoxin gene probes Advances in the use of nucleic acid probes in diagnosis of viral diseases of man Detection of porcine parvovirus using non-radioactive nucleic acid hybridization Polymerase chain reaction Applications of recombinant DNA technology in the development of vaccines, reagents and DNA probes Isolation of a bovine rotavirus with a super-short RNA electrophoretic pattern from a calf with diarrhea Non-radioactive nucleic acid probes for the diagnosis of virus infections Proviral integration and transcriptional patterns of equine infectious anemia virus during persistent and cytopathic infections DNA probes for detection and identification of mycoplasmas (mollicutes) Comparison of porcine parvovirus to other parvoviruses by restriction site mapping and hybridization analysis of southern blots Rapid plasmid library screening using recA-coated biotinylated probes Mapping bovine herpesvirus type 1 latencyrelated RNA in trigeminal ganglia of latently infected rabbits Hybridization probes for the detection and differentiation of two serotypes of porcine rotavirus Detection of foot-and-mouth disease virus with DNA probes in bovine esophageal-pharyngeal fluids Diagnosis of porcine and bovine enteric coronavirus infections using cloned cDNA probes Detection of DNA viruses by radioactive and non-radioactive DNA probes: application to African swine fever virus Diagnostic deoxyribonucleic acid probes for infectious diseases DNA Probes for Infectious Diseases Characterization of Listeria monocytogenes isolates by restriction enzyme analysis and southern blot hybridization Nucleic acid probe characterizes Leptospira interrogans serovars by restriction fragment length polymorphisms key: cord-007506-swx3kqob authors: Paul, Prem S. title: Applications of nucleic acid probes in veterinary infectious diseases date: 2002-11-13 journal: Vet Microbiol DOI: 10.1016/0378-1135(90)90187-z sha: doc_id: 7506 cord_uid: swx3kqob Nucleic acid probe technology is increasingly being used in basic research in veterinary microbiology and in diagnosis of infectious diseases of veterinary importance.


id: cord-256180-xpdtt0ej
author: Ohshima, T.
date: 2010-10-26
extension: .txt
mime: text/plain
words: 3219
sentence: 124
flesch: 50
cache: cache/cord-256180-xpdtt0ej.txt
txt: txt/cord-256180-xpdtt0ej.txt
title:
  A minute virus of canines (MVC: canine bocavirus) isolated from an elderly dog with severe gastroenteritis, and phylogenetic analysis of MVC strains

summary:
  This outcome is, however, contrary to the current concept of canine MVC infection (Carmichael, 1987 (Carmichael, , 1999 and suggested that the present MVC isolate 08-017 might be a novel strain which is pathogenic for adult dogs. As no previous association of MVC infection and disease in aged dogs had been described, further characterization of the isolated virus was performed to determine if it had unique pathogenic or genetic properties.


id: cord-258696-01wj76es
author: Decaro, Nicola
date: 2008-04-30
extension: .txt
mime: text/plain
words: 3449
sentence: 132
flesch: 55
cache: cache/cord-258696-01wj76es.txt
txt: txt/cord-258696-01wj76es.txt
title:
  Experimental infection of dogs with a novel strain of canine coronavirus causing systemic disease and lymphopenia

summary:
  The thermal profile consisted of activation of iTaq DNA polymerase at 95 8C for 10 min, followed by 45 cycles of denaturation at 95 8C for 15 s, annealing at 48 8C (type II-specific assay) for 30 s and extension at 60 8C for 1 min. Plasma samples from inoculated dogs were tested in parallel by virus neutralisation (VN) and ELISA tests (Pratelli et al., 2002) . key: cord-258696-01wj76es authors: Decaro, Nicola; Campolo, Marco; Lorusso, Alessio; Desario, Costantina; Mari, Viviana; Colaianni, Maria Loredana; Elia, Gabriella; Martella, Vito; Buonavoglia, Canio title: Experimental infection of dogs with a novel strain of canine coronavirus causing systemic disease and lymphopenia date: 2008-04-30 journal: Vet Microbiol DOI: 10.1016/j.vetmic.2007.10.008 sha: doc_id: 258696 cord_uid: 01wj76es A pantropic canine coronavirus (CCoV) strain (CB/05) has been recently associated to a fatal outbreak of systemic disease in young dogs.


id: cord-007480-grndfx7b
author: Koopmans, M.
title: Seroepidemiology of Breda virus in cattle using ELISA
date: 2002-11-13
extension: .txt
mime: text/plain
words: 3366
sentence: 135
flesch: 50
cache: cache/cord-007480-grndfx7b.txt
txt: txt/cord-007480-grndfx7b.txt
summary:
  In view of the regular occurrence of winter dysentery in The Netherlands, we were interested to know whether seroconversion to Breda virus antigens would occur. Detection of Breda virus antigen and antibody in humans and animals by enzyme immunoassay Prevalence of rotavirus and coronavirus antigens in the feces of normal cows Introduction to Statistical Analysis.


id: cord-015742-nt44jcjm
author: Garwes, D.J.
title: Antigenicity of structural components from porcine transmissible gastroenteritis virus
date: 2002-11-13
extension: .txt
mime: text/plain
words: 3605
sentence: 133
flesch: 37
cache: cache/cord-015742-nt44jcjm.txt
txt: txt/cord-015742-nt44jcjm.txt
summary:
  Neutralising antibody was demonstrated in serum and colostrum from animals that received whole virus or preparations of surface projections whereas subviral particles failed to stimulate neutralising antibody formation. In contrast, infection of sows with live whole virus resulted in neutralising antibody of the IgG, IgM and IgA classes.


id: cord-007484-nvhu7blo
author: Richard Dorn, C.
date: 2002-11-13
extension: .txt
mime: text/plain
words: 3550
sentence: 130
flesch: 49
cache: cache/cord-007484-nvhu7blo.txt
txt: txt/cord-007484-nvhu7blo.txt
title:
  Characteristics of vero cytotoxin producing Escherichia coli associated with intestinal colonization and diarrhea in calves

summary:
  Escherichia coli strains isolated from calves with diarrhea Dysentery caused by Escherichia coli (S 102-9) in calves: natural and experimental disease Attaching and effacing Escherichia coli infection as a cause of diarrhea in young calves Infection by Vero cytotoxin-producing Escherichia coli Veto cytotoxin produced by Escherichia coli strains of animal origin Vero response to a cytotoxin of Escherichia coli Escherichia coli that cause diarrhea: enterotoxigenic enteropathogenic, enteroinvasive, enterohemorrhagic, and enteroadherent A DNA probe to identify enterohemorrhagic Escherichia coli of O 157:H7 and other serotypes that cause hemorrhagic colitis and hemolytic uremic syndrome Shiga-like toxin production and attaching effacing activity of Escherichia coli associated with calf diarrhea Molecular Cloning: a Laboratory Manual Production of Shiga-like toxin by Escherichia coli Escherichia coli strains isolated from pigs with edema disease produce a variant of Shiga-like toxin II Serotypes of verocytotoxic Escherichia coli isolated from cattle and buffalo calf diarrhoea Detection and characterization of fecal verotoxin-producing Escherichia coli from healthy cattle Natural and experimental infection with an attaching and effacing strain ofEscherichia coli in calves Patterns of adherence of diarrheagenic Escherichia coli to HEp-2 cells Shiga and Shiga-like toxins Cattle as reservoir of verotoxin-producing Escherichia coli It is also possible that SLT I producing E. coli are more common in calves and SLT II E. coli infections are more common among mature cattle.


id: cord-007472-ydrnanug
author: Brock, K.V.
title: Detection of bovine viral diarrhea virus in serum from cattle by dot blot hybridization assay
date: 2002-11-13
extension: .txt
mime: text/plain
words: 3350
sentence: 128
flesch: 41
cache: cache/cord-007472-ydrnanug.txt
txt: txt/cord-007472-ydrnanug.txt
summary:
  However, BVDV hybridization assay results must be examined closely along with virus isolation until further controlled studies can be done to support results obtained by hybridization assay. Transplacental infection is a common sequel in persistently-infected cattle or after BVDV infections in susceptible, pregnant heifers and cows (Orban et al., 1983; Liess et al., 1984) .


id: cord-259988-3s7b5ovi
author: Decaro, Nicola
date: 2005-08-10
extension: .txt
mime: text/plain
words: 3371
sentence: 110
flesch: 44
cache: cache/cord-259988-3s7b5ovi.txt
txt: txt/cord-259988-3s7b5ovi.txt
title:
  Virological and molecular characterization of a mammalian orthoreovirus type 3 strain isolated from a dog in Italy

summary:
  In carnivores, MRV infections have been sporadically reported, although all the three serotypes have been isolated from dogs and cats (Binn et al., 1977; Csiza, 1974; Kokubu et al., 1993; Lou and Wenner, 1963; Marshall et al., 1987; Massie and Shaw, 1966; Mochizuki and Uchizono, 1993; Scott et al., 1970) . MRV-2 and MRV-3 have been isolated from dogs with upper respiratory tract disease (Binn et al., 1977) and diarrhea (Kokubu et al., 1993) , respectively.


id: cord-007497-nn5l5rai
author: Garcia-Sanchez, J.
date: 2002-11-13
extension: .txt
mime: text/plain
words: 3581
sentence: 131
flesch: 49
cache: cache/cord-007497-nn5l5rai.txt
txt: txt/cord-007497-nn5l5rai.txt
title:
  Survey of rotavirus infection in a dairy herd: comparison between polycrylamide gel electrophoresis and two commercial tests

summary:
  latex agglutination for detection of rotavirus in faecal specimens Quantitative observations on experimental reo-like virus (rotavirus) infection in colostrum-deprived calves An assessment of the sensitivity of three methods for the detection of rotavirus Longitudinal survey of rotavirus infection in calves Comparison of six commercial kits for the diagnosis of rotavirus infection in man and calves Pathogenic relationships of rotavirus, Escherichia coli and other agents in mixed infections in calves Comparison of six methods for detecting human rotavirus in stools A survey on bovine rotavirus type l-associated neonatal calf diarrhea in a beef herd Direct appraisal of latex agglutination testing, a convenient alternative to enzyme immunoassay for the detection of rotavirus in childhood gastroenteritis, by comparison of two enzyme immunoassays and two latex tests ELISA for the detection of rotavirus and rotavirus/antibody complexes in faeces A follow-up study on bovine rotavirus dissemination among calves of a large dairy herd Rotavirus and enterotoxigenic Escherichia coli infections of calves on a closed finnish dairy farm Evaluation of seven immunoassays for detection of rotavirus in pediatric stool samples The aetiology and diagnosis of calf diarrhoea Epizootology of bovine rotavirus infection Viral enteritis of calves Morphological and antigenic relationships between viruses (rotaviruses) from acute gastroenteritis of children, calves, piglets, mice and foals key: cord-007497-nn5l5rai authors: Garcia-Sanchez, J.; Corral, C.; Halaihel, N.G.; Simon, M.C.; Alonso, J.L.; Muzquiz, J.L.; Ortega, C.; Girones, O. title: Survey of rotavirus infection in a dairy herd: comparison between polycrylamide gel electrophoresis and two commercial tests date: 2002-11-13 journal: Vet Microbiol DOI: 10.1016/0378-1135(93)90057-e sha: doc_id: 7497 cord_uid: nn5l5rai A survey of rotavirus infection in a dairy herd with a history of neonatal diarrhoea was carried out.


id: cord-260217-bne77cap
author: Letellier, C
date: 1999-01-01
extension: .txt
mime: text/plain
words: 4003
sentence: 165
flesch: 52
cache: cache/cord-260217-bne77cap.txt
txt: txt/cord-260217-bne77cap.txt
title:
  Detection and genotyping of bovine diarrhea virus by reverse transcription-polymerase chain amplification of the 5′ untranslated region

summary:
  However, these viruses are antigenically different from classical BVDV viruses (Ridpath et al., 1994) . Two primer pairs named B(3)B(4) and B(5)B(6) were specific of BVDV genotypes I and II, respectively.


id: cord-007476-wu9tuvy9
author: Katz, Jonathan B.
date: 2000-03-10
extension: .txt
mime: text/plain
words: 3940
sentence: 125
flesch: 30
cache: cache/cord-007476-wu9tuvy9.txt
txt: txt/cord-007476-wu9tuvy9.txt
title:
  Antigenic differences between European and American isolates of porcine reproductive and respiratory syndrome virus (PRRSV) are encoded by the carboxyterminal portion of viral open reading frame 3

summary:
  This material was specific to virus infected cells, but was apparently not of virus structural protein origin, because it was not detected by either RIPA or immunoblot using purified virus preparations. A comparative examination using CF, PLA, and NPLA assays Rapid and efficient purification of native histidine-tagged protein expressed by recombinant vaccinia virus Reproductive failure of unknown etiology Enhanced replication of porcine reproductive and respiratory syndrome ( PRRS) virus in a homogenous subpopulation of MA-104 cell line A simple method for displaying the hydropathic character of a protein Cleavage of structural proteins during assembly of the head of bacteriophage T4 Glycosylation is necessary for the correct folding of human immunodeficiency virus gp 120 in CD4 binding Ratselhafte schweinkrankenheit Molecular cloning: a laboratory manual Differentiation of U.S. and European isolates of porcine reproductive and respiratory syndrome (PIUS) virus by monoclonal antibodies Baculovirus expression vectors: a laboratory manual Lactate dehydrogenase-elevating virus, equine arteritis virus, and simian hemorrhagic fever virus: a new group of positive-strand RNA viruses Primer-directed enzymatic amplification of DNA with a thermostable DNA polymerase Expression of prostaglandin endoperoxidase synthase-1 in a baculovirus system Experimental reproduction of porcine epidemic abortion and respiratory syndrome (mystery swine disease) by infection with Lelystad virus: Koch's postulates fulfilled Antigenic comparison of Lelystad virus and swine infertility and respiratory syndrome (SIRS) virus A modified semm neutralization test for the detection of antibody to porcine reproductive and respiratory syndrome (PRRS) virus in swine sera


id: cord-007481-4mj5isyl
author: Chanter, N.
title: Dysentery in calves caused by an atypical strain of Escherichia coli (S102-9)
date: 2002-11-13
extension: .txt
mime: text/plain
words: 4200
sentence: 146
flesch: 47
cache: cache/cord-007481-4mj5isyl.txt
txt: txt/cord-007481-4mj5isyl.txt
summary:
  Electron microscopy was used to examine more precisely lesions produced by atypical E. coli and to compare them with those described previously. Experimental infection of gnotobiotic calves with atypical E. coli isolates 37/1 or 6/193 Bacteria Two out of four atypical isolates from the culture collection were selected for experimental infections.


id: cord-007479-2z6crx22
author: Lu, Wei
date: 2002-11-13
extension: .txt
mime: text/plain
words: 4049
sentence: 143
flesch: 45
cache: cache/cord-007479-2z6crx22.txt
txt: txt/cord-007479-2z6crx22.txt
title:
  Serological and genotypic characterization of group a rotavirus reassortants from diarrheic calves born to dams vaccinated against rotavirus()

summary:
  Limited information is available on the prevalence of BRV P types in cattle. However, BRV continues to be routinely identified in feces of calves with diarrhea, often from herds where vaccination of the dams with BRV vaccines is current (G. Duhamel, personal observation).


id: cord-258107-s53f25sb
author: Wattrang, Eva
title: Exudative epidermitis and porcine circovirus-2 infection in a Swedish SPF-herd
date: 2002-05-24
extension: .txt
mime: text/plain
words: 4812
sentence: 183
flesch: 54
cache: cache/cord-258107-s53f25sb.txt
txt: txt/cord-258107-s53f25sb.txt
summary:
  Further, it is likely that the fertility problems were due to PCV-2 infection of naõ Ève or insuf®ciently immune pregnant sows and gilts as this type of reproductive signs at least became less evident when PCV-2 became established in the herd. PCV-2 on the other hand, has been associated with various disease syndromes in pigs, including congenital tremors, post-weaning multisystemic wasting syndrome (PMWS) and recently also dermatitis/nephropathy syndrome (Allan et al., 2000b; Rosell et al., 2000; Thomson et al., 2000) .


id: cord-257572-dh4jvbmi
author: van Kasteren, Puck B.
date: 2015-07-09
extension: .txt
mime: text/plain
words: 4717
sentence: 172
flesch: 42
cache: cache/cord-257572-dh4jvbmi.txt
txt: txt/cord-257572-dh4jvbmi.txt
title:
  In vivo assessment of equine arteritis virus vaccine improvement by disabling the deubiquitinase activity of papain-like protease 2

summary:
  In contrast, amounts of challenge virus RNA remained below the detection limit of the assay in all vaccinated horses from Groups 1 and 2. Arteriviruses are a family of animal viruses that includes the prototypic equine arteritis virus (EAV) and porcine reproductive and respiratory syndrome virus (PRRSV).


id: cord-255238-adpn5fb9
author: Pan, Yongfei
title: Discovery of a novel swine enteric alphacoronavirus (SeACoV) in southern China
date: 2017-09-28
extension: .txt
mime: text/plain
words: 4524
sentence: 159
flesch: 47
cache: cache/cord-255238-adpn5fb9.txt
txt: txt/cord-255238-adpn5fb9.txt
summary:
  Structure homology-modeling of SeACoV S glycoprotein was performed by the SWISS-MODEL server (https://www.swissmodel.expasy.org/). The entire SeACoV S protein had 86.4% aa identical with S of the HKU2/GD430 strain, but there was only a 67.4% identity in the extreme NTD of the S protein (S-NTD) between SeACoV and HKU2.


id: cord-258433-n50joeda
author: Chang, Long
date: 2020-08-08
extension: .txt
mime: text/plain
words: 4976
sentence: 165
flesch: 40
cache: cache/cord-258433-n50joeda.txt
txt: txt/cord-258433-n50joeda.txt
title:
  β-cantenin is potentially involved in the regulation of c-Jun signaling following bovine herpesvirus 1 infection

summary:
  We found that relative to the mock infected control, higher levels of p-β-catenin(S552) were readily detected in virus infected cells (whole cell extracts) ( Figure 1A ), as well as in fractions of both the cytosol ( Figure 1A ) and nucleus ( Figure 1C ). P-β-catenin(S552) was readily detected in virus infected cells, and highlighted staining was located at sites of cell-cell contacts ( Figure 2B ).


id: cord-257886-ytlnhyxr
author: Zhao, Kuan
date: 2019-05-03
extension: .txt
mime: text/plain
words: 4903
sentence: 216
flesch: 49
cache: cache/cord-257886-ytlnhyxr.txt
txt: txt/cord-257886-ytlnhyxr.txt
title:
  Nucleocapsid protein of porcine reproductive and respiratory syndrome virus antagonizes the antiviral activity of TRIM25 by interfering with TRIM25-mediated RIG-I ubiquitination

summary:
  Furthermore, N protein inhibits the expression of TRIM25 and TRIM25-mediated RIG-I ubiquitination to suppress interferon β production. Furthermore, with increasing TRIM25 expression, the inhibitory effect of N protein on the ubiquitination of RIG-I diminished.


id: cord-259744-r9j5yzfc
author: McDonagh, Phillip
title: Identification and characterisation of small molecule inhibitors of feline coronavirus replication
date: 2014-12-05
extension: .txt
mime: text/plain
words: 5644
sentence: 194
flesch: 34
cache: cache/cord-259744-r9j5yzfc.txt
txt: txt/cord-259744-r9j5yzfc.txt
summary:
  Data analysis were conducted in GraphPad Prism, with the 50% inhibitory concentration (IC50) and 50% cytotoxic concentration (CC50) values calculated using the inbuilt non-linear curve fitting functions following log 10 transformation of compound concentrations. For all tested compounds CPE inhibition remained greater than 50% when compounds were added at the latest tested time point of 6 h postinfection.


id: cord-257645-6fxfmn1i
author: Chang, Ji-Tao
date: 2010-11-20
extension: .txt
mime: text/plain
words: 5844
sentence: 157
flesch: 29
cache: cache/cord-257645-6fxfmn1i.txt
txt: txt/cord-257645-6fxfmn1i.txt
title:
  Ovine rotavirus strain LLR-85-based bovine rotavirus candidate vaccines: Construction, characterization and immunogenicity evaluation

summary:
  In prior study, vaccine rotavirus was detected in only 1 of 41 daily fecal specimens collected from the calves following oral inoculation with a USDA-licensed modified live bovine rotavirus-coronavirus vaccine by using negative stain electron microscopy. In our study, vaccine rotavirus was detected in only 2 of 77 daily rectal swab specimens collected from 11 neonatal calves following oral inoculation with the rotavirus vaccine candidates.


id: cord-257046-er5orx8s
author: Ladekjær-Mikkelsen, A.-S
date: 2002-10-22
extension: .txt
mime: text/plain
words: 6817
sentence: 270
flesch: 43
cache: cache/cord-257046-er5orx8s.txt
txt: txt/cord-257046-er5orx8s.txt
title:
  Reproduction of postweaning multisystemic wasting syndrome (PMWS) in immunostimulated and non-immunostimulated 3-week-old piglets experimentally infected with porcine circovirus type 2 (PCV2)

summary:
  At this point, there were no differences in the distribution of PCV2 DNA between tissues originating from immunostimulated pigs compared to non-immunostimulated pigs. Differences in immunological status among herds and age of pigs at the time of PCV2 infection might still be part of the answer.


id: cord-260799-kx6hfpu0
author: Mahmood, Zana H.
date: 2011-05-12
extension: .txt
mime: text/plain
words: 3510
sentence: 111
flesch: 42
cache: cache/cord-260799-kx6hfpu0.txt
txt: txt/cord-260799-kx6hfpu0.txt
title:
  Isolation and molecular characterization of Sul/01/09 avian infectious bronchitis virus, indicates the emergence of a new genotype in the Middle East

summary:
  Classical and Variant Strains A 'novel' infectious bronchitis strain infecting broiler chickens in Italy Amino acids within hypervariable region 1 of avian coronavirus IBV (Massachusetts serotype) spike glycoprotein are associated with neutralization epitopes Coronavirus IBV: partial amino terminal sequencing of spike polypeptide S2 identifies the sequence Arg-Arg-Phe-Arg-Arg at the cleavage site of the spike precursor propolypeptide of IBV strains Beaudette and M41 Infectious bronchitis Variation in the spike protein of the 793/B type of infectious bronchitis virus, in the field and during alternate passage in chickens and embryonated eggs Infectious bronchitis virus: immunopathogenesis of infection in the chicken Antigenic and molecular characterization of isolates of the Italy 02 infectious bronchitis virus genotype The isolation and characterization of six avian infectious bronchitis virus isolated in Morocco Molecular epizootiology of infectious bronchitis virus in Sweden indicating the involvement of a vaccine strain Genetically diverse coronaviruses in wild bird populations of north England Isolation of a variant infectious bronchitis virus in Australia that further illustrates diversity among emerging strains Antigenic domains on the peplomer protein of avian infectious bronchitis virus: correlation with biological functions A new genotype of nephropathogenic infectious bronchitis virus circulating in vaccinated and non-vaccinated flocks in China Isolation and genetic analysis revealed no predominant new strains of avian infectious bronchitis virus circulating in South China during Identification of a novel nephropathogenic infectious bronchitis virus in Israel Isolation and identification of Infectious bronchitis virus from commercial chickens Broadly targeted multiprobe QPCR for detection of coronaviruses: coronavirus is common among mallard ducks (Anas Platyrhynchos) Seroprevalence study of infectious bronchitis among poultry in Tamilnadu Serological studies of infectious bronchitis vaccines against Japanese field isolates of homologous and heterologous genotypes Relationship between serotypes and genotypes based on the hypervariable region of the S1 gene of infectious bronchitis virus A reverse transcriptasepolymerase chain reaction survey of infectious bronchitis virus genotypes in Western Europe from This work was carried out with financial support from Kurdistan Institute for strategic studies and scientific researches, University of Sulaimani, and Directorate of Veterinary in Sulaimani, Iraq. S1 gene sequence analysis of a nephropathogenic strain of avian infectious bronchitis virus in Egypt Molecular analysis of the 793/B serotype of infectious bronchitis virus in Great Britain Universal oligonucleotides for the detection of infectious bronchitis virus by the polymerase chain reaction Molecular epizootiology of avian infectious bronchitis in Russia Sequence of the membrane protein gene from avian coronavirus IBV Completion of the sequence of the genome of the coronavirus avian infectious bronchitis virus Infectious Bronchitis Virus:


id: cord-255619-5h3l6nh6
author: Kuo, Shu-Ming
date: 2013-03-23
extension: .txt
mime: text/plain
words: 6332
sentence: 232
flesch: 47
cache: cache/cord-255619-5h3l6nh6.txt
txt: txt/cord-255619-5h3l6nh6.txt
title:
  Evolution of infectious bronchitis virus in Taiwan: Positively selected sites in the nucleocapsid protein and their effects on RNA-binding activity

summary:
  1D and E are representative, we included all the strains in Fig. 1B and constructed their Bayesian trees (Fig. S2) according to the two segments of N-terminal and C-terminal amino acid sequences of IBV N protein (Fig. 1C) . IBV N protein may be vulnerable to alteration under immunological pressure.


id: cord-007474-ckqghr3b
author: Johnson, Michael E.
title: Development of specific nucleic acid probes for the differentiation of porcine rotavirus serotypes
date: 2002-11-13
extension: .txt
mime: text/plain
words: 6492
sentence: 244
flesch: 42
cache: cache/cord-007474-ckqghr3b.txt
txt: txt/cord-007474-ckqghr3b.txt
summary:
  key: cord-007474-ckqghr3b authors: Johnson, Michael E.; Paul, Prem S.; Gorziglia, Mario; Rosenbusch, Ricardo title: Development of specific nucleic acid probes for the differentiation of porcine rotavirus serotypes date: 2002-11-13 journal: Vet Microbiol DOI: 10.1016/0378-1135(90)90180-4 sha: doc_id: 7474 cord_uid: ckqghr3b A dot blot hybridization assay is described for the detection and differentiation of porcine rotavirus serotypes. OSU and Gottfried strains have been designated as the prototype strains for porcine rotavirus serotypes 1 and 2 (Bohl et al., 1984) .


id: cord-254317-n2knqj4z
author: Su, Yunfang
title: The enhanced replication of an S-intact PEDV during coinfection with an S1 NTD-del PEDV in piglets
date: 2018-11-27
extension: .txt
mime: text/plain
words: 8209
sentence: 333
flesch: 57
cache: cache/cord-254317-n2knqj4z.txt
txt: txt/cord-254317-n2knqj4z.txt
summary:
  By IF staining for the PEDV S1 proteins, a few PEDV antigens were observed in the jejunum of the icPC22A-S1Δ197-inoculated piglets (green alone, positive for S1Δ197 only), while many antigens were observed in those of the icPC22 A-inoculated piglets [yellow, representing positive for both S1Δ197 (green) and S1°d omain (red)] and the coinfection piglets (yellow) (Fig. 2C) . PEDV S protein mediates the essential functions of receptor binding (via S1 subunit) and subsequent fusion of the viral and cellular membranes (via S2 subunit) (Li, 2016) .


id: cord-285335-agm4zbcx
author: Kennedy, Melissa
date: 2001-08-08
extension: .txt
mime: text/plain
words: 2294
sentence: 103
flesch: 52
cache: cache/cord-285335-agm4zbcx.txt
txt: txt/cord-285335-agm4zbcx.txt
title:
  Deletions in the 7a ORF of feline coronavirus associated with an epidemic of feline infectious peritonitis

summary:
  The inheritance of susceptibility to feline infectious peritonitis in purebred catteries The molecular genetics of feline coronavirus: comparative sequence analysis of the ORF 7a/7b transcription unit of different biotypes Perspectives on feline coronavirus evolution Veterinary Clinics of North America: Small Animal Practice Correlation of genomic detection of feline coronavirus with various diagnostic assays for feline infectious peritonitis Genetic basis for species vulnerability in the cheetah Virologic and immunologic aspects of feline infectious peritonitis virus infection An overview of feline enteric coronavirus and infectious peritonitis virus infections Two related strains of feline infectious peritonitis virus isolated from immunocompromised cats infected with a feline enteric coronavirus Evaluation of the safety and efficacy of Primucell-FIP vaccine Genomic organization and expression of the 3 0 -end of the canine and feline enteric coronaviruses Feline infectious peritonitis viruses arise by mutation from endemic feline enteric coronaviruses (1998) that FIP viruses contained tyrosine and lysine at these positions whereas putative avirulent FCoV contained histidine and arginine.


id: cord-268918-6l02una0
author: Kapil, Sanjay
title: Characterization of bovine coronavirus isolates/from eight different states in the USA
date: 1999-06-30
extension: .txt
mime: text/plain
words: 3362
sentence: 134
flesch: 48
cache: cache/cord-268918-6l02una0.txt
txt: txt/cord-268918-6l02una0.txt
summary:
  We compared antigenic differences on one-way hemagglutination-inhibition (HI) test, isoelectric focusing of BCV proteins, and relative susceptibility of BCV isolates to hygromycin B. BCV isolation from clinical samples containing coronavirus-like particles observed by negative contrast electron microscopy has been described before (Kapil et al., 1996) . BCV isolates from Canada have been divided into three subgroups on the basis of reactivity with monoclonal antibodies (mAbs) against spike protein of BCV (Michaud and Dea, 1993) .


id: cord-279975-542qbbgp
author: Shibata, Isao
date: 2000-03-15
extension: .txt
mime: text/plain
words: 2724
sentence: 121
flesch: 56
cache: cache/cord-279975-542qbbgp.txt
txt: txt/cord-279975-542qbbgp.txt
title:
  Isolation of porcine epidemic diarrhea virus in porcine cell cultures and experimental infection of pigs of different ages

summary:
  PED virus was isolated from the small intestine of piglets inoculated with PED samples and cultured in Vero, porcine bladder and kidney cells propagated in collagen-coated tissue culture plates in maintenance medium (MM) containing trypsin. 8- and 12-week old specific pathogen-free (SPF) pigs were orally inoculated with PED virus isolated from an outbreak.


id: cord-278641-8lh5y7j0
author: Chen, Jianing
title: Identification and characterization of PEDV infection in rat crypt epithelial cells
date: 2020-09-17
extension: .txt
mime: text/plain
words: 2781
sentence: 126
flesch: 56
cache: cache/cord-278641-8lh5y7j0.txt
txt: txt/cord-278641-8lh5y7j0.txt
summary:
  The replication kinetics of PEDV in IEC-6 cells is similar to that in Vero cells, but it is much higher than in IPEC-J2 cells. Besides that, PEDV infection in IEC-6 cells can induce the production of inflammatory cytokines and interferon, especially the type III IFNs.


id: cord-277746-rllxa6fj
author: Takano, Tomomi
title: Molecular characterization and pathogenicity of a genogroup GVI feline norovirus
date: 2015-08-05
extension: .txt
mime: text/plain
words: 3215
sentence: 122
flesch: 56
cache: cache/cord-277746-rllxa6fj.txt
txt: txt/cord-277746-rllxa6fj.txt
summary:
  Therefore, new strains of FNoV need to be isolated from cats in Japan and several FNoV strains used in infection experiments. FNoV infection occur in animal shelter.


id: cord-272375-c4ut7vn7
author: Palombieri, Andrea
title: Molecular detection and characterization of Carnivore chaphamaparvovirus 1 in dogs
date: 2020-10-01
extension: .txt
mime: text/plain
words: 2823
sentence: 79
flesch: 35
cache: cache/cord-272375-c4ut7vn7.txt
txt: txt/cord-272375-c4ut7vn7.txt
summary:
  In the last few years, ChPVs have been identified in several animal species including bats, rodents, birds, pigs and domestic cats (Berker et al., 2013; Reuter et al., 2014; Yang et al., 2016; Palinski et al., 2016; Lima et al., 2017; de Souza et al., 2017; Yinda et al., 2018; Roediger et al., 2018; William et al., 2018; . A second CPV (CPV-2; genus Protoparvovirus) was reported in the 1970s in Europe and North America in puppies with signs of haemorrhagic gastroenteritis and myocarditis (Appel et al., 1979) .


id: cord-277364-vy2yirek
author: Baró, J.
date: 2015-03-23
extension: .txt
mime: text/plain
words: 3204
sentence: 116
flesch: 39
cache: cache/cord-277364-vy2yirek.txt
txt: txt/cord-277364-vy2yirek.txt
title:
  Porcine circovirus type 2 (PCV2) enteric disease: An independent condition or part of the systemic disease?

summary:
  ; these authors studied the role of PCV2 associated lung disease (PCV2-LD) in cases of respiratory disease of nursery and growing-finishing pigs, but PCV2 infection exclusively restricted to the lung was not found in any case. The present study analysed retrospectively, from a pathological point of view, the relation between intestinal disorders and PCV2 infection in nursery and growing-finishing pigs.


id: cord-285585-tigj7fhc
author: Cleveland, Christopher A.
title: Survey for selected pathogens in wild pigs (Sus scrofa) from Guam, Marianna Islands, USA
date: 2017-05-03
extension: .txt
mime: text/plain
words: 2945
sentence: 114
flesch: 44
cache: cache/cord-285585-tigj7fhc.txt
txt: txt/cord-285585-tigj7fhc.txt
summary:
  key: cord-285585-tigj7fhc authors: Cleveland, Christopher A.; DeNicola, Anthony; Dubey, J.P.; Hill, Dolores E.; Berghaus, Roy D.; Yabsley, Michael J. title: Survey for selected pathogens in wild pigs (Sus scrofa) from Guam, Marianna Islands, USA date: 2017-05-03 journal: Vet Microbiol DOI: 10.1016/j.vetmic.2017.05.001 sha: doc_id: 285585 cord_uid: tigj7fhc Pigs (Sus scrofa) were introduced to Guam in the 1600’s and are now present in high densities throughout the island. Wild pigs are reservoirs for pathogens of concern to domestic animals and humans.


id: cord-290442-rrj684c4
author: Moutinho Costa, Erika
title: Molecular characterization of canine coronavirus strains circulating in Brazil
date: 2014-01-10
extension: .txt
mime: text/plain
words: 3695
sentence: 149
flesch: 57
cache: cache/cord-290442-rrj684c4.txt
txt: txt/cord-290442-rrj684c4.txt
summary:
  Nevertheless, no molecular characterization of CCoV strains has been reported to date. Since the first reports in 1971 (Binn et al., 1974) , CCoV infection has been associated with mild cases of diarrhea.


id: cord-265765-zpf1bla8
author: Holland, Robert E
title: Characterization of eae(+)Escherichia coli isolated from healthy and diarrheic calves
date: 1999-05-14
extension: .txt
mime: text/plain
words: 4612
sentence: 163
flesch: 47
cache: cache/cord-265765-zpf1bla8.txt
txt: txt/cord-265765-zpf1bla8.txt
summary:
  Enterohemolysin, a distinctively different hemolysin from -hemolysin, is synthesized by calf strains of E. coli that produce Shiga toxins (Beutin et al., 1986 (Beutin et al., , 1988 (Beutin et al., , 1989 . The objectives in this research were to determine the presence of certain virulence properties associated with eae E. coli isolated from healthy and diarrheic calves and to assess the role of AEEC in calf diarrheal disease.


id: cord-289629-9p9ld4ur
author: Suzuki, Kazuhiko
title: Equine coronavirus induces apoptosis in cultured cells
date: 2008-06-22
extension: .txt
mime: text/plain
words: 2231
sentence: 86
flesch: 35
cache: cache/cord-289629-9p9ld4ur.txt
txt: txt/cord-289629-9p9ld4ur.txt
summary:
  However, because the findings from bovine-derived cell line may not faithfully reflect on the in vivo situation, further investigation using equine-derived cell line will be needed to clarify the pathobiological characters of ECoV. Coronavirus MHV-3-induced apoptosis in macrophages Caspases: the executioners of apoptosis Induction of apoptosis in MRC-5, diploid human fetal lung cells after infection with human coronavirus OC43 Transmissible gastroenteritis coronavirus induces programmed cell death in infected cells through a caspase-dependent pathway The viral nucleocapsid protein of transmissible gastroenteritis coronavirus (TGEV) is cleaved by caspase-6 and -7 during TGEV-induced apoptosis A comparative sequence analysis to revise the current taxonomy of the family Coronaviridae Characterization of a coronavirus isolated from a diarrheic foal Apoptosis: a basic biological phenomenon with wide-ranging implications in tissue kinetics Isolation and serial propagation of porcine epidemic diarrhea virus in cell cultures and partial characterization of the isolate Syncytia formation induced by coronavirus infection is associated with fragmentation and rearrangement of the Golgi apparatus Coronavirus IBV-induced membrane fusion occurs at near-neutral pH Murine coronavirus-induced oligodendrocyte apoptosis is mediated through the activation of the Fas signaling pathway Induction of caspase-dependent apoptosis in cultured cells by the avian coronavirus infectious bronchitis virus Role of the mitochondrial signaling pathway in murine coronavirus-induced oligodendrocyte apoptosis Canine coronavirus induces apoptosis in cultured cells Apoptosis signaling BID: a novel BH3 domain-only death agonist Genomic characterization of equine coronavirus Apoptotic death of infected cells is detrimental because it causes cell and tissue destruction and inflammatory responses.


id: cord-264598-2u8bm2fz
author: Sánchez-Carvajal, J.M.
date: 2020-06-02
extension: .txt
mime: text/plain
words: 6152
sentence: 169
flesch: 32
cache: cache/cord-264598-2u8bm2fz.txt
txt: txt/cord-264598-2u8bm2fz.txt
title:
  Activation of pro- and anti-inflammatory responses in lung tissue injury during the acute phase of PRRSV-1 infection with the virulent strain Lena

summary:
  In this context, overproduction of nitric oxide (NO), mainly triggered by inducible NO synthase (iNOS) (Akaike and Maeda, 2000) , or upregulation of CD14, as the primary lipopolysaccharide (LPS) receptor (Zanoni and Granucci, 2013) , could contribute to lung inflammation upon infection with PRRSV (Chen et al., 2014; Lee and Kleiboeker, 2005; Van Gucht et al., 2004 Yan et al., 2017) . For its part, iNOS is mainly expressed in response to different stimuli, such as cytokines and LPS, playing a role in tissue injury upon production of NO (Chen et al., 2014; Cho and Chae, 2002; Vlahos et al., 2011; Yan et al., 2017) .


id: cord-261160-g92zhv19
author: Rowland, Raymond R.R
date: 2003-10-30
extension: .txt
mime: text/plain
words: 6389
sentence: 255
flesch: 42
cache: cache/cord-261160-g92zhv19.txt
txt: txt/cord-261160-g92zhv19.txt
title:
  Lymphoid tissue tropism of porcine reproductive and respiratory syndrome virus replication during persistent infection of pigs originally exposed to virus in utero

summary:
  A unique aspect of this study was the thorough analysis of virus replication in pig tissues during asymptomatic infection (Roman numeral III, Fig. 2 ). key: cord-261160-g92zhv19 authors: Rowland, Raymond R.R; Lawson, Steven; Rossow, Kurt; Benfield, David A title: Lymphoid tissue tropism of porcine reproductive and respiratory syndrome virus replication during persistent infection of pigs originally exposed to virus in utero date: 2003-10-30 journal: Vet Microbiol DOI: 10.1016/j.vetmic.2003.07.006 sha: doc_id: 261160 cord_uid: g92zhv19 The ability of porcine reproductive and respiratory syndrome virus (PRRSV) to establish a persistent infection is the principal contributing factor to the world-wide spread of the disease.


id: cord-274892-a6fscyjf
author: Smith, Joseph A.
date: 2008-06-22
extension: .txt
mime: text/plain
words: 4609
sentence: 191
flesch: 41
cache: cache/cord-274892-a6fscyjf.txt
txt: txt/cord-274892-a6fscyjf.txt
title:
  Identification and isolation of a novel herpesvirus in a captive mob of eastern grey kangaroos (Macropus giganteus)

summary:
  Iguanid herpesvirus 2 (GenBank accession no. AY236869) was designated as the outgroup due to its early divergence from other herpesvirus (Wellehan et al., 2003; . The herpesvirus sequence in this study is from a conserved region, and these differences together with host species are significant enough to differentiate this from other known herpesvirus species.


id: cord-290540-r0d6oaez
author: Rottier, Peter J.M.
title: The molecular dynamics of feline coronaviruses
date: 1999-09-01
extension: .txt
mime: text/plain
words: 3821
sentence: 172
flesch: 53
cache: cache/cord-290540-r0d6oaez.txt
txt: txt/cord-290540-r0d6oaez.txt
summary:
  They compared sequences of FIPV viruses from different geographic areas with those of FECV viruses from these same areas and concluded that the viruses isolated from FIP cases are most similar to the coronaviruses from the area where this particular case of FIP occurred. On the other hand we have the virulent strains which cause feline infectious peritonitis (FIP), and we then talk about FIP viruses (FIPV).


id: cord-269560-vq462fh2
author: Stadejek, Tomasz
title: Pathogenicity of three genetically diverse strains of PRRSV Type 1 in specific pathogen free pigs
date: 2017-05-16
extension: .txt
mime: text/plain
words: 5711
sentence: 200
flesch: 44
cache: cache/cord-269560-vq462fh2.txt
txt: txt/cord-269560-vq462fh2.txt
summary:
  An remarkably early response at 3 DPI only in BOR59 infected pigs (p < 0.05) (Fig. 3B) . The highest score was noted in lungs from BOR59 infected pigs 19, 20 and 21, where more than 30 activated lymphoid follicles were observed.


id: cord-272305-eniovfwy
author: Zhao, Ye
date: 2015-10-22
extension: .txt
mime: text/plain
words: 5932
sentence: 262
flesch: 49
cache: cache/cord-272305-eniovfwy.txt
txt: txt/cord-272305-eniovfwy.txt
title:
  Safety and efficacy of an attenuated Chinese QX-like infectious bronchitis virus strain as a candidate vaccine

summary:
  a YN group infected with YN strain; aYN group infected with attenuated YN strain. virus retaining spike glycopolypeptide S2 but not S1 is unable to induce virusneutralizing or haemagglutination-inhibiting antibody, or induce chicken tracheal protection Relationship between sequence variation in the S1 spike protein of infectious bronchitis virus and the extent of cross-protection in vivo Infectious bronchitis Variation in the spike protein of the 793/B type of infectious bronchitis virus, in the field and during alternate passage in chickens and embryonated eggs The use of chicken tracheal organ cultures for the isolation and assay of avian infectious bronchitis virus Breadth of protection of the respiratory tract provided by different live-attenuated infectious bronchitis vaccines against challenge with infectious bronchitis viruses of heterologous serotypes Protection of chickens against renal damage caused by a nephropathogenic infectious bronchitis virus The long view: 40 years of infectious bronchitis research An assessment of opportunities to dissect host genetic variation in resistance to infectious diseases in livestock Virulent avian infectious bronchitis virus, People's Republic of China Efficacy and safety of an attenuated live QX-like infectious bronchitis virus strain as a vaccine for chickens Effect of serial embryo passage of an Arkansas-type avian infectious bronchitis virus isolate on clinical response, virus recovery, and immunity Variant serotypes of infectious bronchitis virus isolated from commercial layer and broiler chickens S1 gene characteristics and efficacy of vaccination against infectious bronchitis virus field isolates from the United States and Israel Development of attenuated vaccines from Taiwanese infectious bronchitis virus strains Attenuation, safety, and efficacy of an infectious bronchitis virus GA98 serotype vaccine Data from 11 years of molecular typing infectious bronchitis virus field isolates Infectious bronchitis virus: S1 gene characteristics of vaccines used in China and efficacy of vaccination against heterologous strains from China S1 gene sequence heterogeneity of a pathogenic infectious bronchitis virus strain and its embryopassaged, attenuated derivatives Complete genome sequence analysis of a predominant infectious bronchitis virus (IBV) strain in China Infectious bronchitis virus: immunopathogenesis of infection in the chicken A simple method of estimating fifty per cent endpoints Pathogenicity of a QX strain of infectious bronchitis virus in specific pathogen free and commercial broiler chickens, and evaluation of protection induced by a vaccination programme based on the Ma5 and 4/91 serotypes Intracloacal infection with avian infectious bronchitis virus QXtype infectious bronchitis virus in commercial flocks in the UK Isolation and identification of glandular stomach type IBV (QX IBV) in chickens Isolation and identification of four infectious bronchitis virus strains in China and analyses of their S1 glycoprotein gene Molecular characterization of an infectious bronchitis virus strain isolated from northern China in 2012 Comparison of the pathogenicity of QX-like, M41 and 793/B infectious bronchitis strains from different pathological conditions This study was supported by Beijing Agriculture Innovation Consortium of Poultry Research System.


id: cord-260869-rym2ik0o
author: Lemmermeyer, Tanja
title: Characterization of monoclonal antibodies against feline coronavirus accessory protein 7b
date: 2016-02-29
extension: .txt
mime: text/plain
words: 6499
sentence: 272
flesch: 51
cache: cache/cord-260869-rym2ik0o.txt
txt: txt/cord-260869-rym2ik0o.txt
summary:
  For further characterization including its unambiguous identification in FCoV-infected cells monoclonal antibodies against 7b protein were generated. As the two mAbs were shown previously to recognize FCoV 7b fusion proteins in Western blot experiments (Fig. 2) , we used this method to analyze cell lysates obtained at 24 h p.i.


id: cord-270727-2dd3b7di
author: Rivera-Benitez, José Francisco
date: 2016-02-29
extension: .txt
mime: text/plain
words: 6479
sentence: 262
flesch: 49
cache: cache/cord-270727-2dd3b7di.txt
txt: txt/cord-270727-2dd3b7di.txt
title:
  Co-infection of classic swine H1N1 influenza virus in pigs persistently infected with porcine rubulavirus

summary:
  The co-infection with swH1N1 was at 44 days post-infection (DPI), right after clinical signs of PorPV infection had stopped. The increase of the rectal temperature observed after PorPV infection resulted in apathy and a reduction in activity.


id: cord-297283-o1oauxex
author: Fritzen, Juliana T.T.
date: 2019-02-18
extension: .txt
mime: text/plain
words: 3520
sentence: 101
flesch: 40
cache: cache/cord-297283-o1oauxex.txt
txt: txt/cord-297283-o1oauxex.txt
title:
  Longitudinal surveillance of rotavirus A genotypes circulating in a high milk yield dairy cattle herd after the introduction of a rotavirus vaccine

summary:
  This result demonstrates the importance of epidemiological monitoring of RVA genotypes circulating in vaccinated dairy cattle herds to the early detection of new potential pathogenic RVA strains. The VP7 and VP4 genes encode 2 structural proteins responsible for the induction of the immune protective response and are used for the binary classification of RVA strains in terms of their G and P genotypes, respectively.


id: cord-277187-rcxjjxw3
author: Xu, Zhichao
date: 2019-11-04
extension: .txt
mime: text/plain
words: 5932
sentence: 225
flesch: 48
cache: cache/cord-277187-rcxjjxw3.txt
txt: txt/cord-277187-rcxjjxw3.txt
title:
  Attenuation and characterization of porcine enteric alphacoronavirus strain GDS04 via serial cell passage

summary:
  No piglets died in P100-inoculated group and the control group except two piglets that were necropsied at 7 d.p.i.. Taken together, these results suggest that PEAV P100 strain is low pathogenic to the newborn piglets. Taken together, these results indicate that PEAV P100 is an attenuated variant.


id: cord-284514-b7no0yrv
author: Davies, Robert L
date: 2003-02-02
extension: .txt
mime: text/plain
words: 4652
sentence: 149
flesch: 39
cache: cache/cord-284514-b7no0yrv.txt
txt: txt/cord-284514-b7no0yrv.txt
title:
  Diversity of avian Pasteurella multocida strains based on capsular PCR typing and variation of the OmpA and OmpH outer membrane proteins

summary:
  Clonal analysis of descent and virulence among selected Escherichia coli Six widespread bacterial clones among Escherichia coli K1 isolates Major heat-modifiable outer membrane protein in gram-negative bacteria: comparison with the OmpA protein of Escherichia coli Immunologic response to turkey poults of various ages to an avirulent Pasteurella multocida vaccine in the drinking water Characterisation of Pasteurella multocida isolated from fowl cholera outbreaks on turkey farms Population structure and diversity of avian isolates of Pasteurella multocida from Australia Molecular epidemiology of Pasteurella multocida in turkeys Identification of type D Pasteurella multocida by counterimmunoelectrophoresis Transmission of Pasteurella multocida on California turkey premises in 1988-1989 Intra-specific diversity and host specificity within Pasteurella haemolytica based on variation of capsular polysaccharide, lipopolysaccharide and outer-membrane proteins Outer membrane protein and lipopolysaccharide variation in Pasteurella haemolytica A1 under different growth conditions Evolutionary genetics of Pasteurella haemolytica isolates recovered from cattle and sheep Molecular variation in the major outer membrane protein P5 gene of nonencapsulated Haemophilus influenzae during chronic infections Random amplification of polymorphic DNA and phenotypic typing of Zimbabwean isolates of Pasteurella multocida Phenotypic characterisation of Pasteurella multocida isolates from Australian poultry Variation in length and sequence of porin (ompP2) alleles of non-capsulate Haemophilus influenzae Molecular characterisation of avian Pasteurella multocida isolates from Australia and Vietnam by REP-PCR and PFGE Bacterial outer membranes: evolving concepts Serum resistance is correlated with encapsulation of avian strains of Pasteurella multocida Characteristics of Pasteurella multocida isolated from waterfowl and associated avian species in California Outer membrane protein patterns mark clones of Escherichia coli O2 and O78 strains that cause avian septicemia Pasteurella multocida produces a protein with homology to the P6 outer membrane protein of Haemophilus influenzae Cleavage of structural proteins during the assembly of the head of bacteriophage T4 Cloning and characterization of the major outer membrane protein gene (ompH) of Pasteurella multocida X-73 Sequence analysis of Pasteurella multocida major outer membrane protein (OmpH) and application of synthetic peptides in vaccination of chickens against homologous strain challenge A modification of the Lowry procedure to simplify protein determination in membrane and lipoprotein samples A population genetic framework for the study of invasive diseases caused by serotype b strains of Haemophilus influenzae Clonal population structure of encapsulated Haemophilus influenzae Reclassification of the genus Pasteurella Trevisan 1887 on the basis of deoxyribonucleic acid homology, with proposals for the new species Pasteurella dagmatis, Pasteurella canis, Pasteurella stomatis, Pasteurella anatis, and Pasteurella langaa Antibodies to loop 6 of the P2 porin protein of nontypeable Haemophilus influenzae are bactericidal against multiple strains Genetic diversity of Pasteurella multocida fowl cholera isolates as demonstrated by ribotyping and 16S rRNA and partial atpD sequence comparisons The pathogenesis of Pasteurella multocida serotype A:3,4 infection in turkeys: a comparison of two vaccine strains and a field isolate Capsular groups of Pasteurella multocida isolated from avian hosts Virulence of avian capsular serogroup B Pasteurella multocida for turkey poults Fowl cholera Somatic serotypes of Pasteurella multocida strains isolated from avian hosts (1976-1988) Virulence and toxigenicity of capsular serogroup D Pasteurella multocida strains isolated from avian hosts Fowl cholera Serogroup F, a new capsule serogroup of Pasteurella multocida Pasteurella multocida Characterization of the major envelope protein from Escherichia coli. This PCR-based capsular typing method was used in the present study and found to be a reliable and rapid method for capsular typing large numbers of P. multocida isolates.


id: cord-270563-fm6j7thy
author: Decaro, N.
title: Canine parvovirus vaccination and immunisation failures: are we far from disease eradication?
date: 2020-06-15
extension: .txt
mime: text/plain
words: 6799
sentence: 185
flesch: 31
cache: cache/cord-270563-fm6j7thy.txt
txt: txt/cord-270563-fm6j7thy.txt
summary:
  Therefore, CPV vaccines are considered core vaccines by professional associations with international outreach, such as the Vaccination Guidelines Group of World Small Animal Veterinary Association (WSAVA) 1 and the American Animal Hospital Association (AAHA) 2 . In the absence of interfering titres of MDA, attenuated CPV vaccines are strongly immunizing, as demonstrated in a field study of dogs entering two shelters that were vaccinated with 1 or 2 doses of a MLV vaccine; protective antibody titres were present in 98 and 100% of dogs, respectively, within 2 weeks of vaccination (Litster et al, 2012) .


id: cord-299303-btdbv2tk
author: Xu, Xingang
date: 2013-06-28
extension: .txt
mime: text/plain
words: 5129
sentence: 196
flesch: 48
cache: cache/cord-299303-btdbv2tk.txt
txt: txt/cord-299303-btdbv2tk.txt
title:
  Porcine epidemic diarrhea virus N protein prolongs S-phase cell cycle, induces endoplasmic reticulum stress, and up-regulates interleukin-8 expression

summary:
  In this study, the anti-apoptotic molecule Bcl-2 was significantly elevated in PEDV N protein expressing cells. To investigate whether the growth inhibition of PEDV N expressing cells was due to arrest of the cell cycle at a particular phase or phases of the cell cycle progression, flow cytometric analysis was performed based on the DNA content in nuclei stained with PI.


id: cord-260840-tudl9k1g
author: Opriessnig, Tanja
date: 2012-07-06
extension: .txt
mime: text/plain
words: 9521
sentence: 318
flesch: 46
cache: cache/cord-260840-tudl9k1g.txt
txt: txt/cord-260840-tudl9k1g.txt
title:
  Effect of porcine circovirus type 2a or 2b on infection kinetics and pathogenicity of two genetically divergent strains of porcine reproductive and respiratory syndrome virus in the conventional pig model

summary:
  The prevalence of PRRSV RNA positive pigs and group mean genomic copy numbers/ml are summarized in Table 6 . Grey shaded areas indicate the presence of PCV2 seropositive pigs (S/P ratio > 0.2) within a treatment group.


id: cord-283946-ts2lyy4p
author: Pedersen, N.C
date: 2000-05-11
extension: .txt
mime: text/plain
words: 7678
sentence: 335
flesch: 51
cache: cache/cord-283946-ts2lyy4p.txt
txt: txt/cord-283946-ts2lyy4p.txt
title:
  An isolated epizootic of hemorrhagic-like fever in cats caused by a novel and highly virulent strain of feline calicivirus

summary:
  Transient mild conjunctivitis and rhinitis, has also been associated with acute FCV infection, but unlike pathogens such as feline herpesvirus, upper respiratory involvement is not the major feature of FCV infection. FCV infection and disease occurs in acute and chronic forms (reviewed by Studdert, 1978; Reubel et al., 1992) .


id: cord-285096-g9y3au1a
author: Mitchell, Judy A.
title: Tropism and pathological findings associated with canine respiratory coronavirus (CRCoV)
date: 2013-03-23
extension: .txt
mime: text/plain
words: 7136
sentence: 265
flesch: 44
cache: cache/cord-285096-g9y3au1a.txt
txt: txt/cord-285096-g9y3au1a.txt
summary:
  When studied in isolation dogs infected with other viruses involved in the CIRD complex, such as CPIV and CAV-2, also cause only mild respiratory disease such as a dry cough and nasal discharge (Appel and Binn, 1987a,b; Castleman, 1985; Buonavoglia and Martella, 2007) . Following experimental infection in dogs, all five CRCoV isolates gave rise to clinical signs of respiratory disease consistent with that observed during natural infection.


id: cord-301382-zlr4nwc2
author: Burimuah, Vitus
date: 2019-12-03
extension: .txt
mime: text/plain
words: 3144
sentence: 117
flesch: 47
cache: cache/cord-301382-zlr4nwc2.txt
txt: txt/cord-301382-zlr4nwc2.txt
title:
  Sero-prevalence, cross-species infection and serological determinants of prevalence of Bovine Coronavirus in Cattle, Sheep and Goats in Ghana

summary:
  Previous studies in Australia (Pass et al., 1982) , New Zealand (Durham et al., 1979) , Chile (Reinhardt et al., 1995) , and Scotland (Snodgrass et al., 1980) reported BCoV infection in small ruminants. Prior to these recent studies, there had been reports of BCoV infection in small ruminants in Australia (Pass et al., 1982) , New Zealand (Durham et al., 1979) , Chile (Reinhardt et al., 1995) , and Scotland (Snodgrass et al., 1980) .


id: cord-299539-f7i4lq2w
author: Bachofen, Claudia
date: 2010-03-24
extension: .txt
mime: text/plain
words: 6541
sentence: 251
flesch: 43
cache: cache/cord-299539-f7i4lq2w.txt
txt: txt/cord-299539-f7i4lq2w.txt
title:
  Clinical appearance and pathology of cattle persistently infected with bovine viral diarrhoea virus of different genetic subgroups

summary:
  In summary, our study showed that, in an endemic situation, clinical cases of BVDV PI animals fall roughly in two distinct categories, with lung-centred pathology occurring mainly in young animals and mucosal pathology mainly in older animals. To compare the mucosal alterations between different PI animals, we used a standardised mucosal (mc) index calculated for each animal.


id: cord-292690-1p1gnpgf
author: Zang, Yue
date: 2020-08-16
extension: .txt
mime: text/plain
words: 5054
sentence: 161
flesch: 41
cache: cache/cord-292690-1p1gnpgf.txt
txt: txt/cord-292690-1p1gnpgf.txt
title:
  Recombinant Lactobacillus acidophilus expressing S(1) and S(2) domains of porcine epidemic diarrhea virus could improve the humoral and mucosal immune levels in mice and sows inoculated orally

summary:
  Moreover, PEDV specific SIgA levels of oral L. acidophilus vaccine groups were significantly higher than the commercial inactivated vaccine group after 14 dpi, and the L. acidophilus-S1 vaccine efficiently induced mucosal immunity in mice compared to the L. acidophilus-S2 group (Figure 2) . Moreover, the IgG antibody levels of the commercial inactivated vaccine group were obviously higher (p < 0.01) than those of oral vaccine groups between 14 dpi to 42 dpi, and the IgG antibody level of the L. acidophilus-S1 group were higher (p < 0.05) than that of the L. acidophilus-S2 group.


id: cord-287978-a6h5u16x
author: Cho, Yong-Il
title: Case–control study of microbiological etiology associated with calf diarrhea
date: 2013-10-25
extension: .txt
mime: text/plain
words: 6656
sentence: 198
flesch: 41
cache: cache/cord-287978-a6h5u16x.txt
txt: txt/cord-287978-a6h5u16x.txt
summary:
  The most noteworthy observations from our study were the significant association of BNoV (OR = 2.0) and Nebovirus (OR = 16.7) with calf diarrhea and their frequent detection (44.7% and 21.6%, respectively) in calf diarrhea cases, suggesting that bovine caliciviruses may play a more significant role in calf diarrhea than what was believed. A high correlation between BRV-A detection and diarrhea (OR = 79.9) and a wide range of association with other pathogens (BNoV, BCoV, Salmonella and C. parvum) may be an evidence that BRV-A is a primary major bovine enteric pathogen of calf diarrhea, which is also in agreement with previous reports describing the primary role of BRV-A in neonatal calf diarrhea (Bartels et al., 2010; Garcia et al., 2000; Uhde et al., 2008) .


id: cord-301136-7odc5un9
author: Hasslung, F.
date: 2005-03-20
extension: .txt
mime: text/plain
words: 5656
sentence: 194
flesch: 44
cache: cache/cord-301136-7odc5un9.txt
txt: txt/cord-301136-7odc5un9.txt
title:
  Experimental reproduction of postweaning multisystemic wasting syndrome (PMWS) in pigs in Sweden and Denmark with a Swedish isolate of porcine circovirus type 2

summary:
  Swedish pigs were also infected with a reference isolate of PCV2 (PCV2-1010) to compare the severity of disease caused by the two isolates in Swedish pigs. It has been suggested that differences in pig husbandry practices, animal genetics and/or viral pathogenesis could have contributed to relative freedom of Swedish pigs from disease.


id: cord-320769-qcpua9ck
author: Park, Su-Jin
title: Molecular epidemiology of bovine toroviruses circulating in South Korea
date: 2008-01-25
extension: .txt
mime: text/plain
words: 2808
sentence: 84
flesch: 46
cache: cache/cord-320769-qcpua9ck.txt
txt: txt/cord-320769-qcpua9ck.txt
summary:
  The primer sets and RT-PCR and nested PCR conditions used for the detection of the BToV, BCoV, BRV A-C, becovirus, BNoV, and BVDV are described elsewhere (Cho et al., 2001; Park et al., 2006, in pressa,b) . (Asakura et al., 1998; Park et al., in press-a,b; Soulsby, 1982; Timoney et al., 1988) .


id: cord-305156-w6iqeayr
author: Gallien, Sarah
date: 2018-10-11
extension: .txt
mime: text/plain
words: 4425
sentence: 160
flesch: 53
cache: cache/cord-305156-w6iqeayr.txt
txt: txt/cord-305156-w6iqeayr.txt
title:
  Limited shedding of an S-InDel strain of porcine epidemic diarrhea virus (PEDV) in semen and questions regarding the infectivity of the detected virus

summary:
  In addition, PEDV RNA in Peyer’s patches and in mesenteric lymph nodes was also present for the two inoculated boars. However, to the best of our knowledge, the presence of PEDV RNA in semen of boars infected by an S-InDel PEDV strain has not been studied so far.


id: cord-305079-foifc8ch
author: Zhou, Ying Shun
date: 2013-02-22
extension: .txt
mime: text/plain
words: 4865
sentence: 157
flesch: 44
cache: cache/cord-305079-foifc8ch.txt
txt: txt/cord-305079-foifc8ch.txt
title:
  Establishment of reverse genetics system for infectious bronchitis virus attenuated vaccine strain H120

summary:
  The replicase gene of avian coronavirus infectious bronchitis virus is a determinant of pathogenicity A recombinant avian infectious bronchitis virus expressing a heterologous spike gene belonging to the 4/91 serotype Development and use of the H strain of avian infectious bronchitis virus from the Netherlands as a vaccine: a review Characterization of an efficient coronavirus ribosomal frameshifting signal: requirement for an RNA pseudoknot Genes 3 and 5 of infectious bronchitis virus are accessory protein genes Gene 5 of the avian coronavirus infectious bronchitis virus is not essential for replication Recombinant avian infectious bronchitis virus expressing a heterologous spike gene demonstrates that the spike protein is a determinant of cell tropism Reverse genetics system for the avian coronavirus infectious bronchitis virus Coronavirus IBV: further evidence that the surface projections are associated with two glycopolypeptides Nidovirales: a new order comprising Coronaviridae and Arteriviridae Coronavirus avian infectious bronchitis virus Longitudinal field studies of infectious bronchitis virus and avian pneumovirus in broilers using type-specific polymerase chain reactions Newcastle disease virus, a host range-restricted virus, as a vaccine vector for intranasal immunization against emerging pathogens An arginine-to-proline mutation in a domain with undefined functions within the helicase protein (Nsp13) is lethal to the coronavirus infectious bronchitis virus in cultured cells The pathogenesis of virulent and avirulent avian infectious bronchitis virus Neither the RNA nor the proteins of open reading frames 3a and 3b of the coronavirus infectious bronchitis virus are essential for replication Eightplasmid system for rapid generation of influenza virus vaccines A vaccine candidate of attenuated genotype VII Newcastle disease virus generated by reverse genetics A new influenza virus virulence determinant: the NS1 protein four Cterminal residues modulate pathogenicity Effect of IBV-H120 vaccination in broilers on colibacillosis susceptibility after infection with a virulent Massachusetts-type IBV strain Recombinant Newcastle disease virus as a vaccine vector Manual of Diagnostic Tests and Vaccines for Terrestrial Animals A simple method of estimating fifty per cent endpoints Coronaviruses of domestic livestock and poultry: interspecies transmission, pathogenesis, and immunity The Springer Index of Viruses Newcastle disease virus expressing H5 hemagglutinin gene protects chickens against Newcastle disease and avian influenza In vitro assembled, recombinant infectious bronchitis viruses demonstrate that the 5a open reading frame is not essential for replication Strategy for systematic assembly of large RNA and DNA genomes: transmissible gastroenteritis virus model Reverse genetics with a full-length infectious cDNA of severe acute respiratory syndrome coronavirus Systematic assembly of a full-length infectious cDNA of mouse hepatitis virus strain A59 Complete genome sequence and recombination analysis of infectious bronchitis virus attenuated vaccine strain H120 The remaining one third of the genome encodes the structural proteins and group-specific ORFs, including spike glycoprotein (S), envelope protein (E), membrane Veterinary Microbiology 162 (2013) Infectious bronchitis virus (IBV) strain H120 was successfully rescued as infectious clone by reverse genetics.


id: cord-308315-g6udfu2a
author: Decaro, Nicola
date: 2010-10-26
extension: .txt
mime: text/plain
words: 3721
sentence: 109
flesch: 37
cache: cache/cord-308315-g6udfu2a.txt
txt: txt/cord-308315-g6udfu2a.txt
title:
  Characterisation of bubaline coronavirus strains associated with gastroenteritis in water buffalo (Bubalus bubalis) calves

summary:
  The 5 0 end of the S gene of the four prototype BuCoV strains was PCR-amplified and sequenced as previously described (Decaro et al., 2008d) and the obtained sequences were compared to reference BuCoV strain 179/07-11 and BCoV strains Mebus (old strain) and 339/ 06 (recently isolated in Italy, Decaro et al., 2008c) . We have already shown that more than one BCoV strain or ancestor virus was likely involved in the origin of CRCoV, thus leading to the emergence of different canine strains (Lorusso et al., 2009) .


id: cord-292101-lnap47kp
author: Jung, Kwonil
date: 2015-06-12
extension: .txt
mime: text/plain
words: 3776
sentence: 133
flesch: 38
cache: cache/cord-292101-lnap47kp.txt
txt: txt/cord-292101-lnap47kp.txt
title:
  Structural alteration of tight and adherens junctions in villous and crypt epithelium of the small and large intestine of conventional nursing piglets infected with porcine epidemic diarrhea virus

summary:
  In inoculated nursing pigs, histologic lesions were limited to the small intestine, mainly jejunum and ileum, and included acute diffuse, severe atrophic enteritis. PEDV antigen-positive cells per jejunal villus of inoculated nursing pigs were 9.3 (AE7.3) at PID 1, 13.9 (AE5.9) at PID 3, and 9.2 (AE4.3) at PID 5.


id: cord-293458-jb7u9xn6
author: Gerdts, Volker
title: Vaccines for porcine epidemic diarrhea virus and other swine coronaviruses
date: 2016-12-02
extension: .txt
mime: text/plain
words: 5584
sentence: 219
flesch: 43
cache: cache/cord-293458-jb7u9xn6.txt
txt: txt/cord-293458-jb7u9xn6.txt
summary:
  Induction of antigen-specific systemic and mucosal immune responses by feeding animals transgenic plants expressing the antigen Efficacy of an inactivated genotype 2b porcine epidemic diarrhea virus vaccine in neonatal piglets Colostral antibodymediated and cell-mediated immunity contributes to innate and antigenspecific immunity in piglets Mechanisms of coronavirus cell entry mediated by the viral spike protein Development of a Novel Vaccine for Porcine Epidemic Diarrhea Virus Passive immunity in transmissible gastroenteritis of swine: immunoglobulin characteristics of antibodies in milk after inoculating virus by different routes Immunology of transmissible gastroenteritis Antibody responses in serum, colostrum, and milk of swine after infection or vaccination with transmissible gastroenteritis virus Gammadelta T cell effector functions: a blend of innate programming and acquired plasticity New insights into the dual recruitment of IgA+ B cells in the developing mammary gland Identification of the epitope region capable of inducing neutralizing antibodies against the porcine epidemic diarrhea virus T cell-mediated immune response to respiratory coronaviruses Strategies for design and application of enteric viral vaccines p161, a murine membrane protein expressed on mast cells and some macrophages, is mouse CD13/aminopeptidase N Protective efficacy of a replicon particle vaccine in both naïve and previously exposed gilts against porcine epidemic diarrhea virus Coronavirus gene 7 counteracts host defenses and modulates virus virulence Porcine epidemic diarrhea virus nucleocapsid protein antagonizes beta interferon production by sequestering the interaction between IRF3 and TBK1 Safety and antibody response of pigs to an experimental Porcine Epidemic Diarrhea Virus (PEDV) vaccine, killed virus Previous infection of sows with a mild strain of porcine epidemic diarrhea virus confers protection against infection with a severe strain Evaluation of a PED vaccine on piglet mortality and sow immunity The phenotype and activation status of T and NK cells in porcine colostrum suggest these are central/effector memory cells Antibodies and their receptors: different potential roles in mucosal defense Surface-displayed porcine epidemic diarrhea viral (PEDV) antigens on lactic acid bacteria Porcine epidemic diarrhea virus uses cell-surface heparan sulfate as an attachment factor Porcine epidemic diarrhea virus infection: etiology, epidemiology, pathogenesis and immunoprophylaxis Porcine reproductive and respiratory syndrome virus modifies innate immunity and alters disease outcome in pigs subsequently infected with porcine respiratory coronavirus: implications for respiratory viral co-infections Genetic characterization of porcine epidemic diarrhea virus in Korea from IFN-lambdas mediate antiviral protection through a distinct class II cytokine receptor complex Lactogenic immunity and vaccines for porcine epidemic diarrhea virus (PEDV): historical and current concepts Replication of transmissible gastroenteritis coronavirus (TGEV) in swine alveolar macrophages A common mucosal chemokine (mucosae-associated epithelial chemokine/CCL28) selectively attracts IgA plasmablasts Outbreak-related porcine epidemic diarrhea virus strains similar to US strains, South Korea Porcine epidemic diarrhea virus: an emerging and re-emerging epizootic swine virus Porcine aminopeptidase N is a functional receptor for the PEDV coronavirus High-level mucosal and systemic immune responses induced by oral administration with Lactobacillusexpressed porcine epidemic diarrhea virus (PEDV) CCL28 controls immunoglobulin (Ig)A plasma cell accumulation in the lactating mammary gland and IgA antibody transfer to the neonate Porcine epidemic diarrhea virus E protein causes endoplasmic reticulum stress and up-regulates interleukin-8 expression Porcine epidemic diarrhea virus N protein prolongs S-phase cell cycle, induces endoplasmic reticulum stress, and up-regulates interleukin-8 expression Long-lived effector/central memory T-cell responses to severe acute respiratory syndrome coronavirus (SARS-CoV) S antigen in recovered SARS patients Efficacy and immunogenicity of recombinant swinepox virus expressing the A epitope of the TGEV S protein Immune evasion of porcine enteric coronaviruses and viral modulation of antiviral innate signaling Identification of a conserved linear B-cell epitope in the M protein of porcine epidemic diarrhea virus Suppression of type I interferon production by porcine epidemic diarrhea virus and degradation of CREB-binding protein by nsp1 Construction of a bivalent DNA vaccine co-expressing S genes of transmissible gastroenteritis virus and porcine epidemic diarrhea virus delivered by attenuated Salmonella typhimurium Mucosal and systemic isotypespecific antibody responses and protection in conventional pigs exposed to virulent or attenuated porcine epidemic diarrhoea virus


id: cord-312119-wzcas4zd
author: Lu, Ti
date: 2019-02-06
extension: .txt
mime: text/plain
words: 4607
sentence: 136
flesch: 30
cache: cache/cord-312119-wzcas4zd.txt
txt: txt/cord-312119-wzcas4zd.txt
title:
  Mapping the neutralizing epitopes of F18 fimbrial adhesin subunit FedF of enterotoxigenic Escherichia coli (ETEC)

summary:
  Escherichia coli strains constructed to express modified enterotoxins protect young piglets from challenge with a virulent enterotoxigenic Escherichia coli strain that expresses the same adhesin and enterotoxins Characterization of the adhesin of Escherichia coli F18 fimbriae Mapping the binding domain of the F18 fimbrial adhesin Observations on the pathogenic properties of the K88, Hly and Ent plasmids of Escherichia coli with particular reference to porcine diarrhoea Current and future vaccines could help reduce reliance on antibiotics, AMR says Health Monitoring Syst. Refolded fusion proteins were examined in SDS-PAGE with Coomassie blue staining, and were characterized in Western blot or direct ELISAs with anti-F18 mouse antiserum.


id: cord-299751-2drhoz70
author: Tabynov, Kairat
date: 2016-08-30
extension: .txt
mime: text/plain
words: 6126
sentence: 189
flesch: 39
cache: cache/cord-299751-2drhoz70.txt
txt: txt/cord-299751-2drhoz70.txt
title:
  Inactivated porcine reproductive and respiratory syndrome virus vaccine adjuvanted with Montanide™ Gel 01 ST elicits virus-specific cross-protective inter-genotypic response in piglets

summary:
  Two types of PRRSV vaccines are commercially available, modified live virus (MLV) vaccine and a killed virus (KV) vaccine (Charerntantanakul, 2009) . A commercial killed PRRSV vaccine (C/KV/ADJ, strain NVDC-JXA1, type 2) was selected as a reference vaccine, which has been in use for immunization of pigs against PRRS in most of the pig farms in Kazakhstan.


id: cord-323856-yr3zfxz3
author: Le Devendec, Laetitia
title: Development of a pig infection model with colistin-resistant Escherichia coli
date: 2018-10-13
extension: .txt
mime: text/plain
words: 5625
sentence: 207
flesch: 50
cache: cache/cord-323856-yr3zfxz3.txt
txt: txt/cord-323856-yr3zfxz3.txt
summary:
  As a result, E. coli strains have developed antimicrobial resistance, particularly to the most frequently administered molecules. Preparation of strains, media and inocula and whole genome sequencing Three E. coli strains (12-246, 12-269 and 13-220) from our previously characterized collection of mcr-1-positive E. coli isolates from diseased pigs were selected on the basis of their resistances, serogroups and virulence genes as detected by high-throughput real-time PCR microarray technology (Delannoy et al., 2017) .


id: cord-316592-a1uhy2ex
author: Huang, Fen
title: RNA interference inhibits hepatitis E virus mRNA accumulation and protein synthesis in vitro
date: 2010-05-19
extension: .txt
mime: text/plain
words: 3717
sentence: 135
flesch: 44
cache: cache/cord-316592-a1uhy2ex.txt
txt: txt/cord-316592-a1uhy2ex.txt
summary:
  The expression of HEV ORF2 protein was observed 48 h post-transfection. For the absorbance at 492 nm is directly proportional to the number of living cells in culture, the number of living cells in a well treated with each of HEV specific siRNAs was more than that treated with scrambled siRNA or untransfected controls cells.


id: cord-301655-6nxhvvm4
author: Lei, Xi-Mei
date: 2019-08-10
extension: .txt
mime: text/plain
words: 6457
sentence: 207
flesch: 40
cache: cache/cord-301655-6nxhvvm4.txt
txt: txt/cord-301655-6nxhvvm4.txt
title:
  Specific recombinant proteins of porcine epidemic diarrhea virus are immunogenic, revealing their potential use as diagnostic markers

summary:
  The purified recombinant PEDV S1, ORF3C, E, ADRP, Nsp1, Nsp2, and Ac peptides were resolved on a 5-10% Bis-Tris polyacrylamide gel (Invitrogen) by electrophoresis and subsequently transferred onto a polyvinylidene difluoride (PVDF) membrane. Collectively, the data indicated that the PEDV S1 protein was more specific and accurate as a detection antigen in ELISA tests.


id: cord-305684-ipeup5mp
author: Chen, Yuqiu
date: 2016-12-16
extension: .txt
mime: text/plain
words: 5167
sentence: 173
flesch: 45
cache: cache/cord-305684-ipeup5mp.txt
txt: txt/cord-305684-ipeup5mp.txt
title:
  Identification and molecular characterization of a novel serotype infectious bronchitis virus (GI-28) in China

summary:
  Presence of infectious bronchitis virus strain CK/CH/LDL/97I in the middle east Early pathogenesis in chicks of infection with an enterotropic strain of infectious bronchitis virus Recent studies on the enterotropic strain of avian infectious bronchitis virus Experimental infection of IS/885/00-like infectious bronchitis virus in specific pathogen free and commercial broiler chicks Comparison of the pathogenicity of QX-like, M41 and 793/B infectious bronchitis strains from different pathological conditions Coronavirus avian infectious bronchitis virus Molecular and antigenic characteristics of Massachusetts genotype infectious bronchitis coronavirus in China Coronaviruses: important emerging human pathogens Induction of cystic oviducts and protection against early challenge with infectious bronchitis virus serotype D388 (genotype QX) by maternally derived antibodies and by early vaccination Infection of day old chicks with infectious bronchitis (IB) virus and subsequent anatomical abnormalities Analysis of S1 gene of avian infectious bronchitis virus isolated in southern China during Serotype, antigenicity, and pathogenicity of a naturally recombinant TW I genotype infectious bronchitis coronavirus in China Altered pathogenicity of a tl/CH/LDT3/03 genotype infectious bronchitis coronavirus due to natural recombination in the 5'-17 kb region of the genome Rapid detection and non-subjective characterisation of infectious bronchitis virus isolates using high-resolution melt curve analysis and a mathematical model Identification of previously unknown antigenic epitopes on the S and N proteins of avian infectious bronchitis virus Susceptibility of three genetic lines of chicks to infection with a nephropathogenic T strain of avian infectious bronchitis virus Emergence of a group 3 coronavirus through recombination Phylogenetic distribution and predominant genotype of the avian infectious bronchitis virus in China during A new genotype of nephropathogenic infectious bronchitis virus circulating in vaccinated and non-vaccinated flocks in China Comparative analysis of four Massachusetts type infectious bronchitis coronavirus genomes reveals a novel Massachusetts type strain and evidence of natural recombination in the genome Genetic diversity of avian infectious bronchitis coronavirus strains isolated in China between Phylogenetic analysis of the S1 glycoprotein gene of infectious bronchitis viruses isolated in China during Phylodynamic analysis of avian infectious bronchitis virus in South America The molecular biology of coronaviruses Identification of a novel coronavirus from a beluga whale by using a panviral microarray Attempts to reproduce a runting/stunting-type syndrome using infectious agents isolated from affected Mississippi broilers A novel variant of the infectious bronchitis virus resulting from recombination events in Italy and Spain Differences in the tissue tropism to chicken oviduct epithelial cells between avian coronavirus IBV strains QX and B1648 are not related to the sialic acid binding properties of their spike proteins A simple method of estimating fifty percent endpoints Structural bases of coronavirus attachment to host aminopeptidase N and its inhibition by neutralizing antibodies Screening and identification of T helper 1 and linear immunodominant antibody-binding epitopes in the spike 2 domain and the nucleocapsid protein of feline infectious peritonitis virus MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0 S1 gene-based phylogeny of infectious bronchitis virus: an attempt to harmonize virus classification The avian coronavirus spike protein Discovery of a novel bottlenose dolphin coronavirus reveals a distinct species of marine mammal coronavirus in Gammacoronavirus Isolation and identification of four infectious bronchitis virus strains in China and analyses of their S1 glycoprotein gene The CH III and A2 genotypes have previously been used to classify other IBV genotypes in China (Liu et al., 2006; Xu et al., 2007) .


id: cord-308953-4mhjtitv
author: Kim, Hyun-Jeong
title: Detection and genotyping of Korean porcine rotaviruses
date: 2010-08-26
extension: .txt
mime: text/plain
words: 4237
sentence: 137
flesch: 45
cache: cache/cord-308953-4mhjtitv.txt
txt: txt/cord-308953-4mhjtitv.txt
summary:
  shares new phylogenetic lineage with G2 porcine rotavirus strain Diversity of G-type and P-type of human and animal rotaviruses and its genetic background Development of a duplex PCR assay for detection of Brachyspira hyodysenteriae and Brachyspira pilosicoli in pig feces Rotavirus G and P types circulating in Brazil: characterization by RTPCR, probe hybridization, and sequence analysis Identification of a novel VP4 genotype carried by a serotype G5 porcine rotavirus strain Recommendations for the classification of group A rotaviruses using all 11 genomic RNA segments G8 rotavirus strains isolated in the Democratic Republic of Congo belong to the DS-1-like genogroup Neonatal diarrhea of pigs in Quebec: infectious causes of significant outbreaks Isolation and molecular characterization of a serotype 9 human rotavirus strain Characterization of a ''European-like'' serotype G8 human rotavirus isolated in Australia Rotavirus and severe childhood diarrhea Molecular characterization of novel G5 bovine rotavirus strains Phylogenetic analysis of porcine rotavirus in Argentina: increasing diversity of G4 strains and evidence of interspecies transmission Genetic heterogeneity, evolution and recombination in emerging G9 rotaviruses Molecular characterization of porcine rotaviruses from the southern region of Brazil: characterization of an atypical genotype G[9] strain Molecular characterization of serotype G9 rotavirus strains from a global collection Serotypic differentiation of rotaviruses in field samples from diarrheic pigs by using nucleic acid probes specific for porcine VP4 and human and porcine VP7 genes Global distribution of rotavirus serotypes/ genotypes and its implication for the development and implementation of an effective rotavirus vaccine Comparative studies of human rotavirus serotype G8 strains recovered in South Africa and the United Kingdom Epidemiological studies of piglet diarrhoea in intensively managed Danish sow herds. Molecular epidemiology of rotaviruses among healthy calves in Japan: isolation of a novel rotavirus bearing new P and G genotypes Molecular epidemiology of rotaviruses in Nigeria: detection of unusual strains with G2P[6] and G8P[1] specificities G and P genotypes of group A rotavirus strains circulating in calves in Brazil Isolation and serotyping of porcine rotaviruses and antigenic comparison with other rotaviruses Rotavirus gastroenteritis and weather The characterization of VP7 (G type) and VP4 (P type) genes of bovine group A rotaviruses from field samples using RT-PCR and RFLP analysis Rotaviruses: basic biology, epidemiology and methodologies Rotavirus isolate WI61 representing a presumptive new human serotype Rotavirus G and P types in children with acute diarrhea in Characterization of the G serotype and genogroups of New Delhi newborn rotavirus strain 116E Rotaviruses Characterization of incompletely typed rotavirus strains from Guinea-Bissau: identification of G8 and G9 types and a high frequency of mixed infections Molecular characterization of novel P[14],G8 bovine group A rotavirus, Sun9, isolated in Japan Serotype diversity and reassortment between human and animal rotavirus strains: implications for rotavirus vaccine programs Identification of group A rotavirus gene 4 types by polymerase chain reaction Rotavirus vaccines at the threshold VP4 typing of bovine and porcine group A rotaviruses by PCR Sequence analysis of unusual P[7]G5 bovine rotavirus strains reveals evidence of interspecies transmission Great diversity of group A rotavirus strains and high prevalence of mixed rotavirus infections in India Genetic diversity of porcine sapoviruses Molecular epidemiological profile of rotavirus in South Korea Novel porcine rotavirus of genotype P[27]


id: cord-331868-xbszmiql
author: Clark, K.J
date: 1998-10-01
extension: .txt
mime: text/plain
words: 3184
sentence: 139
flesch: 51
cache: cache/cord-331868-xbszmiql.txt
txt: txt/cord-331868-xbszmiql.txt
title:
  An in vitro study of theaflavins extracted from black tea to neutralize bovine rotavirus and bovine coronavirus infections

summary:
  However, according to our extractions, one 8 ounce cup (240 ml) of brewed tea (U.S. source, 2.5 gm of tea leaves) contains approximately 0.375 mg of crude theaflavin extract, which is equal to 15.6 mg/ml. Tea extracts were reconstituted in the mobile phase at 1.0 mg/ml.


id: cord-322683-wkrj6n1d
author: Zhang, Pengfei
date: 2020-07-13
extension: .txt
mime: text/plain
words: 4080
sentence: 168
flesch: 47
cache: cache/cord-322683-wkrj6n1d.txt
txt: txt/cord-322683-wkrj6n1d.txt
title:
  Cellular Poly(C) Binding Protein 2 Interacts with porcine epidemic diarrhea virus Papain-Like Protease 1 and Supports Viral Replication

summary:
  A DNA sequence encoding PEDV PLP1 protein was cloned into pCMV-HA as previously described to yield the pCMV-PLP1-HA expression vector (Yu et al., 2019) . PLP1 overexpression enhanced endogenous accumulation of PCBP2 protein in a dose-dependent manner (Fig. 6) .


id: cord-296611-ma32oz4o
author: Ma, Tianxin
title: Novel genotype of infectious bronchitis virus isolated in China
date: 2019-01-29
extension: .txt
mime: text/plain
words: 5923
sentence: 194
flesch: 42
cache: cache/cord-296611-ma32oz4o.txt
txt: txt/cord-296611-ma32oz4o.txt
summary:
  Phylogenetic and evolutionary relationships among torovirus field variants: evidence for multiple intertypic recombination events S1 gene-based phylogeny of infectious bronchitis virus: an attempt to harmonize virus classification Relationship between serotypes and genotypes based on the hypervariable region of the S1 gene of infectious bronchitis virus Emergence of novel nephropathogenic infectious bronchitis viruses currently circulating in Chinese chicken flocks Genetic diversity of avian infectious bronchitis virus in China in recent years Characterization of three infectious bronchitis virus isolates from China associated with proventriculus in vaccinated chickens Sequencing and serologic identification of S1 genes of infectious bronchitis viruses isolated during 2012-2013 in Guangxi Province, China The authors declare that they have no competing interests. Infection with strain LGX/111119 resulted in significantly higher production of infectious viruses in trachea, lung, kidney, proventriculus, and cecal tonsil tissues than those of corresponding tissues of chickens infected with strain I0636/16 (Fig. 4B) .


id: cord-319712-3dikelw6
author: Pujols, Joan
date: 2014-12-05
extension: .txt
mime: text/plain
words: 4735
sentence: 177
flesch: 54
cache: cache/cord-319712-3dikelw6.txt
txt: txt/cord-319712-3dikelw6.txt
title:
  Survivability of porcine epidemic diarrhea virus (PEDV) in bovine plasma submitted to spray drying processing and held at different time by temperature storage conditions

summary:
  Moreover, if SDP would become contaminated Use of spray-dried animal plasma in diets for weanling pigs Experimental infection of pigs with a new porcine enteric coronavirus CV777 An evaluation of contaminated complete feed as a vehicle for porcine epidemic diarrhea virus infection of naive pigs following consumption via natural feeding behavior: proof of concept The spray-drying process is sufficient to inactivate infectious porcine epidemic diarrhea virus in plasma Origin, evolution, and genotyping of emergent porcine epidemic diarrhea virus strains in the United States Quantitation, biological and physicochemical properties of cell culture-adapted porcine epidemic diarrhea coronavirus (PEDV) Pathology of US porcine epidemic diarrhea virus strain PC21A in gnotobiotic pigs Isolation and serial propagation of porcine epidemic diarrhea virus in cell cultures and partial characterization of the isolate New variants of porcine epidemic diarrhea virus, China Comparison of an enzyme-linked immunosorbent assay with serum neutralization test for serodiagnosis of porcine epidemic diarrhea virus infection Infection with porcine epidemic diarrhoea virus Porcine epidemic diarrhea virus RNA present in commercial spray-dried porcine plasma is not infectious to naive pigs Sequence analysis of the partial spike glycoprotein gene of porcine epidemic diarrhea viruses isolated in Korea Investigation into the role of potentially contaminated feed as a source of the first-detected outbreaks of porcine epidemic diarrhea in Canada Porcine epidemic diarrhea A new coronavirus-like particle associated with diarrhea in swine Efficacy of spray-drying to reduce infectivity of pseudo rabies and porcine reproductive and respiratory syndrome (PRRS) viruses and seroconversion in pigs fed diets containing spray-dried animal plasma Neutralizing antibodies against porcine circovirus type 2 in liquid pooled plasma contribute to the biosafety of commercially manufactured spray-dried porcine plasma Inactivation of swine vesicular disease virus in porcine plasma by spray-drying Lack of transmission of porcine circovirus type 2 to weanling pigs by feeding them spray dried porcine plasma Commercial spray-dried porcine plasma does not transmit porcine circovirus type 2 in weaned pigs challenged with porcine reproductive and respiratory syndrome virus Commercially produced spray dried porcine plasma contains high levels of porcine circovirus type 2 (PCV2) DNA but did not transmit PCV2 when fed to naïve pigs Porcine epidemic diarrhea virus: a comprehensive review of molecular epidemiology, diagnosis, and vaccines Differentiation of a Vero cell adapted porcine epidemic diarrhea virus from Korean field strains by restriction fragment length polymorphism analysis of ORF 3 Evaluation of time and temperature sufficient to inactivate porcine epidemic diarrhea virus in swine feces on metal surfaces Spray dried animal plasma as an alternative to antibiotics in weanling pigs -a review Growth performance of weanling pigs fed spray-dried animal plasma: a review Funding for this study was provided by APC Europe, S.A., Granollers, Barcelona, Spain. Sixty grams of SDBP contained in a large Petri dish were inoculated with 9.0 mL of PEDV cell culture by spraying the liquid virus culture onto the SDBP using a spray bottle.


id: cord-306976-p2521bl4
author: Gao, Mengying
date: 2016-08-15
extension: .txt
mime: text/plain
words: 5125
sentence: 165
flesch: 48
cache: cache/cord-306976-p2521bl4.txt
txt: txt/cord-306976-p2521bl4.txt
title:
  Serotype, antigenicity, and pathogenicity of a naturally recombinant TW I genotype infectious bronchitis coronavirus in China

summary:
  Experimental infection of IS/885/00-like infectious bronchitis virus in specific pathogen free and commercial broiler chicks Comparison of the pathogenicity of QX-like, M41 and 793/B infectious bronchitis strains from different pathological conditions Effects of infectious bronchitis on egg production Effects of infectious bronchitis in baby chicks Infectious bronchitis Molecular and antigenic characteristics of Massachusetts genotype infectious bronchitis coronavirus in China Pathogenicity of four serotypes of avian infectious bronchitis virus for the oviduct of young chickens of varying ages Egg quality and production following infectious bronchitis virus exposure at one day old Induction of cystic oviducts and protection against early challenge with infectious bronchitis virus serotype D388 (genotype QX) by maternally derived antibodies and by early vaccination Infection of day old chicks with infectious bronchitis (IB) virus and subsequent anatomical abnormalities A comparative study of pigeons and chickens experimentally infected with PPMV-1 to determine antigenic relationships between PPMV-1 and NDV strains A 15-year analysis of molecular epidemiology of avian infectious bronchitis coronavirus in China Fine level epitope mapping and conservation analysis of two novel linear B-cell epitopes of the avian infectious bronchitis coronavirus nucleocapsid protein Identification of previously unknown antigenic epitopes on the S and N proteins of avian infectious bronchitis virus Persistence of virus in the tissues and development of the oviduct in the fowl following infection at day old with infectious bronchitis virus Altered pathogenicity, immunogenicity, tissue tropism and 3 0 -7 kb region sequence of an avian infectious bronchitis coronavirus strain after serial passage in embryos Evaluation of the protection conferred by commercial vaccines and attenuated heterologous isolates in China against the ck/CH/LDL/97I strain of infectious bronchitis coronavirus Characterization of a recombinant coronavirus infectious bronchitis virus with distinct S1 subunits of spike and nucleocapsid genes and a 3 0 untranslated region Identification of a novel nephropathogenic infectious bronchitis virus in Israel A simple method of estimating fifty percent endpoints MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0 S1 gene-based phylogeny of infectious bronchitis virus: an attempt to harmonize virus classification Genetic grouping for the isolates of avian infectious bronchitis virus in Taiwan Emergence of novel nephropathogenic infectious bronchitis viruses currently circulating in Chinese chicken flocks Serotype shift of a 793/B genotype infectious bronchitis coronavirus by natural recombination key: cord-306976-p2521bl4 authors: Gao, Mengying; Wang, Qiuling; Zhao, Wenjun; Chen, Yuqiu; Zhang, Tingting; Han, Zongxi; Xu, Qianqian; Kong, Xiangang; Liu, Shengwang title: Serotype, antigenicity, and pathogenicity of a naturally recombinant TW I genotype infectious bronchitis coronavirus in China date: 2016-08-15 journal: Vet Microbiol DOI: 10.1016/j.vetmic.2016.05.018 sha: doc_id: 306976 cord_uid: p2521bl4 Since 2009, strains of the naturally recombinant TW I genotype of infectious bronchitis virus (IBV) have caused considerable damage to the Chinese poultry industry.


id: cord-320559-up1q3k6q
author: Dortmans, J.C.F.M.
title: Porcine epidemic diarrhea virus (PEDV) introduction into a naive Dutch pig population in 2014
date: 2018-05-24
extension: .txt
mime: text/plain
words: 4221
sentence: 158
flesch: 51
cache: cache/cord-320559-up1q3k6q.txt
txt: txt/cord-320559-up1q3k6q.txt
summary:
  We declare no conflict of interest. Surveillance and control of PED coronavirus in pigs in Italy Porcine epidemic diarrhea virus shedding and antibody response in swine farms: a longitudinal study Isolation and characterization of porcine epidemic diarrhea viruses associated with the 2013 disease outbreak among swine in the United States Viral disease affects U.S. Pigs: porcine epidemic diarrhea found in at least 11 states Updated epidemiological data on PED Good practices for biosecurity in the pig sector -issues and options in developing and transition countries Coronaviruses: an overview of their replication and pathogenesis Detection of antibodies against porcine epidemic diarrhea virus in serum and colostrum by indirect ELISA Reactivity of porcine epidemic diarrhea virus structural proteins to antibodies against porcine enteric coronaviruses: diagnostic implications Previous infection of sows with a mild strain of porcine epidemic diarrhea virus confers protection against infection with a severe Complete genome sequence of a porcine epidemic diarrhea S gene indel strain isolated in France Comparison of porcine epidemic diarrhea viruses from Germany and the United States Origin, evolution, and genotyping of emergent porcine epidemic diarrhea virus strains in the United States Multiplex realtime RT-PCR for the simultaneous detection and quantification of transmissible gastroenteritis virus and porcine epidemic diarrhea virus Completion of the porcine epidemic diarrhoea coronavirus (PEDV) genome sequence Porcine epidemic diarrhea virus: an emerging and re-emerging epizootic swine virus Wild boars harboring porcine epidemic diarrhea virus (PEDV) may play an important role as a PEDV reservoir Manipulation of the porcine epidemic diarrhea virus genome using targeted RNA recombination Cellular entry of the porcine epidemic diarrhea virus Experimental infection of a US spike-insertion deletion porcine epidemic diarrhea virus in conventional nursing piglets and cross-protection to the original US PEDV infection Antigenic relationships among porcine epidemic diarrhea virus and transmissible gastroenteritis virus strains Role of transportation in spread of porcine epidemic diarrhea virus infection Epidemic of diarrhoea caused by porcine epidemic diarrhoea virus in Italy Outbreak of porcine epidemic diarrhea virus in Portugal Cell culture isolation and sequence analysis of genetically diverse US porcine epidemic diarrhea virus strains including a novel strain with a large deletion in the spike gene Comparison of serum neutralization and enzyme-linked immunosorbent assay on sera from porcine epidemic diarrhea virus vaccinated pigs A new coronavirus-like particle associated with diarrhea in swine Porcine epidemic diarrhoea virus: a comprehensive review of molecular epidemiology, diagnosis, and vaccines Emergence of porcine epidemic diarrhea virus in southern Germany First detection, clinical presentation and phylogenetic characterization of porcine epidemic diarrhea virus in Austria Emergence of porcine epidemic diarrhea virus in the United States: clinical signs, lesions, and viral genomic sequences MEGA6: molecular evolutionary genetics analysis version 6.0 WIN EPISCOPE 2.0: improved epidemiological software for veterinary medicine Distinct characteristics and complex evolution of PEDV strains New variant of porcine epidemic diarrhea virus Pig farming


id: cord-337369-2ceq42av
author: Blum, Shlomo
title: Outbreak of Streptococcus equi subsp. zooepidemicus infections in cats
date: 2010-07-29
extension: .txt
mime: text/plain
words: 2488
sentence: 112
flesch: 49
cache: cache/cord-337369-2ceq42av.txt
txt: txt/cord-337369-2ceq42av.txt
summary:
  Here we describe an outbreak of respiratory disease in a cattery, which, to the best of our knowledge, is the first report of S. zooepidemicus infection outbreak in cats. S. zooepidemicus was the main bacteria isolated.


id: cord-319168-i23pqiwx
author: Abro, Shahid Hussain
title: Emergence of novel strains of avian infectious bronchitis virus in Sweden
date: 2012-03-23
extension: .txt
mime: text/plain
words: 4935
sentence: 210
flesch: 52
cache: cache/cord-319168-i23pqiwx.txt
txt: txt/cord-319168-i23pqiwx.txt
summary:
  Published IBV sequences of Massachusetts type, M41, H120, Baudette, Italy02, QX-like and 4/91 available in the GenBank were used to determine likely origin, genetic characteristics and molecular epidemiology of the Swedish isolates. Similar type of IBV isolates has been reported in Israel and Korea (Meir et al., 2004; Park et al., 2005) .


id: cord-293781-7so4gqc8
author: Zhao, Shanshan
date: 2014-06-25
extension: .txt
mime: text/plain
words: 7146
sentence: 251
flesch: 48
cache: cache/cord-293781-7so4gqc8.txt
txt: txt/cord-293781-7so4gqc8.txt
title:
  Effects of virulent and attenuated transmissible gastroenteritis virus on the ability of porcine dendritic cells to sample and present antigen

summary:
  Dendritic cells (DCs), through uptake and presentation of antigens to T cells, initiate distinct immune responses to different infections. TGEV mainly infects and replicates in the porcine intestinal , through uptake and presentation of antigens to T cells, initiate distinct immune responses to different infections.


id: cord-312867-fxgx9c4v
author: Di Martino, Barbara
title: Canine kobuviruses in diarrhoeic dogs in Italy
date: 2013-09-27
extension: .txt
mime: text/plain
words: 2574
sentence: 82
flesch: 43
cache: cache/cord-312867-fxgx9c4v.txt
txt: txt/cord-312867-fxgx9c4v.txt
summary:
  Novel kobu-like viruses have been identified in sheep, goats, wild-boars, rodents and dogs (Reuter et al., 2010; Barry et al., 2011; Kapoor et al., 2011; Li et al., 2011; Phan et al., 2011; Lee et al., 2012; Carmona-Vicente et al., 2013; Reuter et al., 2013) . (Reuter et al., 2008) .


id: cord-343036-vmprhd9g
author: Zhang, Li
title: Efficient inactivation of African swine fever virus by ozonized water
date: 2020-07-10
extension: .txt
mime: text/plain
words: 2601
sentence: 81
flesch: 41
cache: cache/cord-343036-vmprhd9g.txt
txt: txt/cord-343036-vmprhd9g.txt
summary:
  The results showed that 2 log10 (99%) reduction in viral titer was observed when 10(4.0) TCID(50)/mL wild-type or reporter ASFV was inactivated with ozonized water as lower as 5 mg/L within 1 min at room temperature; while a viral reduction of approximately 2log10 (99%) wasobserved when 10(5.0) TCID(50)/mL wild-type or reporter ASFV was inactivated with 5 mg/L ozonized water within 1 min, and 3 log10 (99.9%) virus was inactivated by 10 or 20 mg/L ozonized water within 3 or 1 min, respectively; furthermore, 5 mg/L ozonized water inactivated 2 log10 (99%) reporter ASFV as higher as 10(6.75) TCID(50)/mL in 1 min, and a viral reduction of approximately 3 log10 (99.9%) in reporter ASFV or 2 log10 (99%) in wild-type virus was observed when inactivated with 10 mg/L ozonized water in 1 min; meanwhile, a viral reduction of 3 log10 (99.9%) was observed when 20 mg/L ozonized water was applied to the wild-type ASFV of 10(6.75) f observed when 20 mg/L ozonized water inactivated wild-type ASFV of 10 6.75 TCID50/ml in 3 min, indicating that ozonized water (5 to 20 mg/L) can also effectively inactivate the high dose of ASFV within a short time.


id: cord-321261-3lp54mmu
author: Kuo, Shu-Ming
date: 2010-08-26
extension: .txt
mime: text/plain
words: 3888
sentence: 143
flesch: 48
cache: cache/cord-321261-3lp54mmu.txt
txt: txt/cord-321261-3lp54mmu.txt
title:
  Evolution of infectious bronchitis virus in Taiwan: Characterisation of RNA recombination in the nucleocapsid gene

summary:
  Although previous studies of IBV S1 genes have argued that TW IBV is an independent branch of the US group (Huang et al., 2004) , the relationship between TW IBV and CH isolates remains unclear. TW IBV strains were isolated and propagated through the allantoic sac route by inoculating 9-11-day-old specific pathogens free (SPF) embryonated eggs from the Animal Health Research Institute, Council of Agriculture in Taiwan (Gelb and Jackwood, 1998) .


id: cord-327170-rv0efgg2
author: Decaro, Nicola
title: Tissue distribution of the antigenic variants of canine parvovirus type 2 in dogs
date: 2007-03-31
extension: .txt
mime: text/plain
words: 2679
sentence: 66
flesch: 32
cache: cache/cord-327170-rv0efgg2.txt
txt: txt/cord-327170-rv0efgg2.txt
summary:
  A case report Identification of types of canine parvovirus circulating in Spain First two confirmed cases of malignant catarrhal fever in Italy Quantitation of canine coronavirus RNA in the faeces of dogs by TaqMan RT-PCR Maternally-derived antibodies in pups and protection from canine parvovirus infection Virological and molecular characterization of a Mammalian orthoreovirus type 3 strain isolated from a dog in Italy Clinical and virological findings in pups naturally infected by canine parvovirus type 2 Glu-426 mutant New approaches for the molecular characterization of canine parvovirus type 2 strains A real-time PCR assay for rapid detection and quantitation of canine parvovirus type 2 DNA in the feces of dogs A minor groove binder probe real-time PCR assay for discrimination between type 2-based vaccines and field strains of canine parvovirus Characterisation of the canine parvovirus type 2 variants using minor groove binder probe technology Diagnostic tools based on minor groove binder technology for rapid identification of vaccine and field strains of canine parvovirus type 2b First detection of canine parvovirus type 2c in pups with haemorrhagic enteritis in Spain Canine parvovirus infection: which diagnostic test for virus? Antibody levels and protection to canine parvovirus type 2 Detection of canine distemper virus in dogs by real-time RT-PCR Identification of bovine and porcine rotavirus G types by PCR Detection of seven species of pathogenic leptospires by PCR using two sets of primers Comparison of isolates of canine parvovirus by monoclonal antibody and restriction-enzyme analysis Detection and differentiation of CAV-1 and CAV-2 by polymerase chain reaction Predominance of canine parvovirus (CPV) in unvaccinated cat populations and emergence of new antigenic types of CPVs in cats Design and evaluation of a primer pair that detects both Norwalk-and Sapporo-like caliciviruses by RT-PCR Detection of mammalian reovirus RNA by using reverse transcription-PCR: sequence diversity within the l3-encoding L1 gene Nested PCR for the diagnosis of calicivirus infections in the cat A canine parvovirus mutant is spreading in Italy Surveillance activity for canine parvovirus in Italy Antigenic and genomic variabilities among recently prevalent parvoviruses of canine and feline origin in Japan A novel antigenic variant of canine parvovirus from a Vietnamese dog Mapping specific functions in the capsid structure of canine parvovirus and feline panleukopenia virus using infectious plasmid clones Natural variation of key: cord-327170-rv0efgg2 authors: Decaro, Nicola; Martella, Vito; Elia, Gabriella; Desario, Costantina; Campolo, Marco; Lorusso, Eleonora; Colaianni, Maria Loredana; Lorusso, Alessio; Buonavoglia, Canio title: Tissue distribution of the antigenic variants of canine parvovirus type 2 in dogs date: 2007-03-31 journal: Vet Microbiol DOI: 10.1016/j.vetmic.2006.11.005 sha: doc_id: 327170 cord_uid: rv0efgg2 Twelve dogs dead as consequence of natural infection caused by canine parvovirus (CPV) type 2a (n = 4), type 2b (n = 4) or type 2c (n = 4) were investigated for determining the viral DNA loads in different tissue samples.


id: cord-329274-ncvvmkca
author: Labarque, G
date: 2002-08-02
extension: .txt
mime: text/plain
words: 3329
sentence: 157
flesch: 46
cache: cache/cord-329274-ncvvmkca.txt
txt: txt/cord-329274-ncvvmkca.txt
title:
  Porcine reproductive–respiratory syndrome virus infection predisposes pigs for respiratory signs upon exposure to bacterial lipopolysaccharide

summary:
  Two out of the 15 pigs did not show respiratory signs after LPS administration. After LPS administration, pigs were intensively monitored for clinical signs.


id: cord-312208-8ydh6jev
author: Meng, X.J
date: 2000-06-12
extension: .txt
mime: text/plain
words: 8398
sentence: 251
flesch: 36
cache: cache/cord-312208-8ydh6jev.txt
txt: txt/cord-312208-8ydh6jev.txt
title:
  Heterogeneity of porcine reproductive and respiratory syndrome virus: implications for current vaccine efficacy and future vaccine development

summary:
  Despite the observed difference in virulence among PRRSV isolates, tissue tropism and distribution of PRRSV antigen or nucleic acid within tissues and organs were very similar in pigs inoculated with different strains of PRRSV Haynes et al., 1997) . The expression and replication of PRRSV requires the production of at least six subgenomic mRNAs (sg mRNAs) (Conzelmann et al., 1993; Meulenberg et al., 1993a Meulenberg et al., , b, 1997a Meng et al., 1994 Meng et al., , 1996b Snijder and Meulenberg, 1998) .


id: cord-328032-unwehrr5
author: Zhou, Haisheng
title: Identification of a novel recombinant virulent avian infectious bronchitis virus
date: 2017-01-03
extension: .txt
mime: text/plain
words: 4222
sentence: 163
flesch: 48
cache: cache/cord-328032-unwehrr5.txt
txt: txt/cord-328032-unwehrr5.txt
summary:
  JT-1 displays severe renal lesions, including degeneration, necrosis of renal tubular epithelial cells, and exfoliated renal tubular epithelial cells (black arrow) Molecular characterization and pathogenicity of infectious bronchitis coronaviruses: complicated evolution and epidemiology in china caused by cocirculation of multiple types of infectious bronchitis coronaviruses Origin and characteristics of the recombinant novel avian infectious bronchitis coronavirus isolate ck/CH/LJL/111054 Phylogenetic analysis of the S1 glycoprotein gene of infectious bronchitis viruses isolated in China during Evaluation of recombinant fowlpox virus expressing infectious bronchitis virus S1 gene and chicken interferon-gamma gene for immune protection against heterologous strains Phylogenetic analysis of infectious bronchitis coronaviruses newly isolated in China, and pathogenicity and evaluation of protection induced by Massachusetts serotype H120 vaccine against QX-like strains Recombination in avian gamma-coronavirus infectious bronchitis virus QX-like infectious bronchitis virus in Africa Genetic diversity and selection regulates evolution of infectious bronchitis virus Binding of avian coronavirus spike proteins to host factors reflects virus tropism and pathogenicity Genome sequence and origin analyses of the recombinant novel IBV virulent isolate SAIBK2 Characterization and analysis of an infectious bronchitis virus strain isolated from southern China in 2013 Complete genome sequence of a recombinant nephropathogenic infectious bronchitis virus strain in China Comparison of hematoxylin-eosin staining and methyl violet staining for displaying ghost cells Molecular characterization of an infectious bronchitis virus strain isolated from northern China in 2012 Comparison of the pathogenicity of QX-like, M41 and 793/B infectious bronchitis strains from different pathological conditions Coronavirus genome structure and replication Comparisons of envelope through 5B sequences of infectious bronchitis coronaviruses indicates recombination occurs in the envelope and membrane genes Coronavirus avian infectious bronchitisvirus The long view: 40 years of infectious bronchitis research Virulent avian infectious bronchitis virus, People's Republic of China Analysis of S1 gene of avian infectious bronchitis virus isolated in southern China during Development and efficacy of a novel live-attenuated QX-like nephropathogenic infectious bronchitis virus vaccine in China A 15-year analysis of molecular epidemiology of avian infectious bronchitis coronavirus in China Emergence of a group 3 coronavirus through recombination Molecular evolution and emergence of avian gammacoronaviruses Phylogenetic distribution and predominant genotype of the avian infectious bronchitis virus in China during Two genotypes of infectious bronchitis virus are responsible for serological variation in KwaZulu-Natal poultry flocks prior to 2012 Evolution of infectious bronchitis virus in Taiwan: positively selected sites in the nucleocapsid protein and their effects on RNA-binding activity The molecular biology of coronaviruses Isolation and genetic analysis revealed no predominant new strains of avian infectious bronchitis virus circulating in South China during An emerging recombinant cluster of nephropathogenic strains of avian infectious bronchitis virus in Korea Successful cross-protective efficacy induced by heatadapted live attenuated nephropathogenic infectious bronchitis virus derived from a natural recombinant strain Isolation of avian infectious bronchitis coronavirus from domestic peafowl (Pavo cristatus) and teal (Anas) Histopathologic analysis (haematoxylin-eosin stain) of chickens infected with IBV strain CK/CH/2010/JT-1 A, normal trachea tissue control B, trachea tissue infected with CK/CH/2010/JT-1 displays extensive dropout, degeneration, and necrosis of ciliated epithelial cells and lymphocytic infiltration (black arrow).


id: cord-315094-pzixgqcy
author: Benetka, Viviane
date: 2004-03-26
extension: .txt
mime: text/plain
words: 5539
sentence: 176
flesch: 48
cache: cache/cord-315094-pzixgqcy.txt
txt: txt/cord-315094-pzixgqcy.txt
title:
  Prevalence of feline coronavirus types I and II in cats with histopathologically verified feline infectious peritonitis

summary:
  CCV exhibits an identity to FCoV-1 KU-2 of 72%; its much closer relationship to FCoV type II than to FCoV type I can nicely be observed by the similarity of several nucleotide changes of FCoV type II and CCV. These findings demonstrate that in FIP cases FCoV type I predominates, too, nonetheless, in 14% of the cases FCoV type II was detected, suggesting its causative involvement in cases of FIP.


id: cord-317640-61crnh6a
author: Zhu, Zhaozhong
title: Homologous recombination shapes the genetic diversity of African swine fever viruses
date: 2019-08-10
extension: .txt
mime: text/plain
words: 5463
sentence: 221
flesch: 47
cache: cache/cord-317640-61crnh6a.txt
txt: txt/cord-317640-61crnh6a.txt
summary:
  African swine fever virus multigene family 360 genes affect virus replication and generalization of infection in Ornithodoros porcinus ticks Comparison of the genome sequences of non-pathogenic and pathogenic African swine fever virus isolates Epidemiology of African swine fever virus Phylogenomic analysis of 11 complete African swine fever virus genome sequences African swine fever virus replication and genomics Poxviruses deploy genomic accordions to adapt rapidly against host antiviral defenses OrthoFinder: solving fundamental biases in whole genome comparisons dramatically improves orthogroup inference accuracy Antibody-mediated neutralization of African swine fever virus: myths and facts Food and Agriculture Organization of the United Nations Evolution of African swine fever virus genes related to evasion of host immune response Frequent ectopic recombination of virulence factor genes in telomeric chromosome clusters of P-falciparum African swine fever virus: a review Phylogeographic analysis of African swine fever virus Molecular characterization of African swine fever virus, China Genetic Information Research Institute Human enterovirus 71 protein interaction network prompts antiviral drug repositioning Dendroscope: an interactive viewer for large phylogenetic trees MAFFT multiple sequence alignment software version 7: improvements in performance and usability The intracellular proteome of African swine fever virus Clustal W and clustal X version 2.0 Simple sequence repeat variations expedite phage divergence: mechanisms of indels and gene mutations RDP: detection of recombination amongst aligned sequences Comprehensive phylogenetic reconstructions of African swine fever virus: proposal for a new classification and molecular dating of the virus Homologous RNA recombination in brome mosaic virus: AU-rich sequences decrease the accuracy of crossovers Genetic characterization of African swine fever virus isolates from soft ticks at the wildlife/domestic interface in Mozambique and identification of a novel genotype R: A Language and Environment for Statistical Computing. The suids include domestic pigs and wild boars, and were reported as the natural hosts of the virus (Sanchez-Cordon et al., 2018; Costard et al., 2013) .


id: cord-306948-wkisfz1m
author: Han, Mingyuan
title: Engineering the PRRS virus genome: Updates and perspectives
date: 2014-12-05
extension: .txt
mime: text/plain
words: 9532
sentence: 287
flesch: 32
cache: cache/cord-306948-wkisfz1m.txt
txt: txt/cord-306948-wkisfz1m.txt
summary:
  The coding sequences in the viral genome are flanked by the 5 0 and 3 0 un-translated regions (UTRs) involved in translation, replication, and transcription (see review in Snijder et al., 2013) . The fusion of the common 5 0 sequence (leader TRS) to the different 3 0 -body segments of sg mRNAs is mediated by discontinuous transcription which is a common strategy of nidoviruses (Sawicki et al., 2007; Snijder et al., 2013; Sola et al., 2011) .


id: cord-350467-18bvwxci
author: Clark, K.J
date: 1998-10-01
extension: .txt
mime: text/plain
words: 3420
sentence: 127
flesch: 40
cache: cache/cord-350467-18bvwxci.txt
txt: txt/cord-350467-18bvwxci.txt
title:
  In vitro studies on the use of clay, clay minerals and charcoal to adsorb bovine rotavirus and bovine coronavirus

summary:
  The suspended samples of clay bound virus or clay/virus complex retained from the adsorption and desorption experiments were used for infectivity testing. Percent of adsorbed virus, desorbed virus, and infectivity of clay bound virus were calculated.


id: cord-323845-s78t5qxj
author: Soliman, H.
date: 2006-05-31
extension: .txt
mime: text/plain
words: 3912
sentence: 136
flesch: 43
cache: cache/cord-323845-s78t5qxj.txt
txt: txt/cord-323845-s78t5qxj.txt
title:
  Reverse transcription loop-mediated isothermal amplification (RT-LAMP) for rapid detection of viral hemorrhagic septicaemia virus (VHS)

summary:
  The specificity of the VHS-LAMP primers and conditions to VHS virus was confirmed by its aptitude to amplify only RNA from VHS virus serotypes, with no amplification of IHNVor non-infected fish (Fig. 5) . Agarose gel highlighting the specificity of the RT-LAMP primers to VHS virus RNA.


id: cord-333366-j3yh5v1g
author: Zhao, Dongmin
title: Peptide inhibitors of tembusu virus infection derived from the envelope protein
date: 2020-05-07
extension: .txt
mime: text/plain
words: 5082
sentence: 212
flesch: 49
cache: cache/cord-333366-j3yh5v1g.txt
txt: txt/cord-333366-j3yh5v1g.txt
summary:
  In this study, the peptide TP1, derived from DII of the TMUV E protein, and peptide TP2, corresponding to a sequence in the stem region of the TMUV E protein, were highly effective in inhibiting TMUV infection, indicating that TP1 and TP2 are potential candidates for TMUV treatment. The amounts of TMUV E protein in the cell lysates were detected by western blotting as described previously .


id: cord-324324-8ybfiz8f
author: Decaro, Nicola
title: Novel human coronavirus (SARS-CoV-2): A lesson from animal coronaviruses
date: 2020-04-14
extension: .txt
mime: text/plain
words: 14950
sentence: 415
flesch: 34
cache: cache/cord-324324-8ybfiz8f.txt
txt: txt/cord-324324-8ybfiz8f.txt
summary:
  After 2002-2003 SARS epidemic, the renovated interest in HCoVs allowed the discovery of two additional viruses, the alphacoronavirus HCoV-NL63 and the betacoronavirus HCoV-HKU1, derived from bats and rodents, respectively (Tao et al., 2017) . NL63 (Tao et al., 2017) .


