# bib

id: cord-014505-8nc8uep2
author: Vahora, Jennifer
title: Evaluation of REDCap as a Tool for Outbreak Data Management, Illinois, 2013-2014
date: 2015-02-26
extension: .txt
mime: text/plain
words: 528
sentence: 20
flesch: 40
cache: cache/cord-014505-8nc8uep2.txt
txt: txt/cord-014505-8nc8uep2.txt
summary:
  Prior to adopting this web-based application, an evaluation was conducted to assess how REDCap may facilitate outbreak data management. REDCap's document upload functionality would have facilitated storage and access of lab reports for foodborne illness, MERS CoV, and NDM outbreaks.


id: cord-279681-ezu1j0tc
author: Wang, Lin-Fa
title: From Hendra to Wuhan: what has been learned in responding to emerging zoonotic viruses
date: 2020-02-11
extension: .txt
mime: text/plain
words: 1286
sentence: 55
flesch: 53
cache: cache/cord-279681-ezu1j0tc.txt
txt: txt/cord-279681-ezu1j0tc.txt
summary:
  Third, a One Health approach 11 in EZV outbreak responses and control is vital. Second, clinicians and scientists have a crucial role in responding to such EZV outbreaks.


id: cord-006035-9y504uyf
author: Vashishtha, Vipin M.
title: Correspondence
date: 2015-01-20
extension: .txt
mime: text/plain
words: 1224
sentence: 58
flesch: 40
cache: cache/cord-006035-9y504uyf.txt
txt: txt/cord-006035-9y504uyf.txt
summary:
  State officials believe that outbreak investigation is the responsibility of the Central Government. Similarly, in Muzaffarpur outbreaks, one group claimed it to be caused by heat stroke, and another hinted towards a toxin contained in the litchi, a locally grown fruit


id: cord-291238-myjyw8ei
author: Longtin, Jean
title: Rhinovirus Outbreaks in Long-term Care Facilities, Ontario, Canada
date: 2010-09-17
extension: .txt
mime: text/plain
words: 1639
sentence: 67
flesch: 43
cache: cache/cord-291238-myjyw8ei.txt
txt: txt/cord-291238-myjyw8ei.txt
summary:
  These fi ndings are in accordance with the increasing knowledge that HRV outbreaks cause severe and fatal disease. Moreover, because multiple serotypes of HRV exist, retrospective serologic testing cannot be used to evaluate the prevalence of HRV disease (5) .


id: cord-135784-ad5avzd6
author: Gharavi, Erfaneh
date: 2020-05-01
extension: .txt
mime: text/plain
words: 2498
sentence: 96
flesch: 52
cache: cache/cord-135784-ad5avzd6.txt
txt: txt/cord-135784-ad5avzd6.txt
title:
  Early Outbreak Detection for Proactive Crisis Management Using Twitter Data: COVID-19 a Case Study in the US

summary:
  In this paper, we explore Twitter data right before and during COVID-19 pandemic across the United States at the state level, for the most common symptoms of COVID-19 including cough and fever. To offer a framework for outbreak early detection, the result of analysis on Twitter data are compared to the formal dataset provided by John Hopkins University which is openly available to the public for educational and academic research purposes 3 .


id: cord-286844-kxhp58my
author: Hansen, S.
date: 2007-04-30
extension: .txt
mime: text/plain
words: 2304
sentence: 93
flesch: 42
cache: cache/cord-286844-kxhp58my.txt
txt: txt/cord-286844-kxhp58my.txt
title:
  Closure of medical departments during nosocomial outbreaks: data from a systematic analysis of the literature

summary:
  key: cord-286844-kxhp58my authors: Hansen, S.; Stamm-Balderjahn, S.; Zuschneid, I.; Behnke, M.; Rüden, H.; Vonberg, R.-P.; Gastmeier, P. title: Closure of medical departments during nosocomial outbreaks: data from a systematic analysis of the literature date: 2007-04-30 journal: Journal of Hospital Infection DOI: 10.1016/j.jhin.2006.12.018 sha: doc_id: 286844 cord_uid: kxhp58my Summary A total closure of an affected medical department is one of the most expensive infection control measures during investigation of a nosocomial outbreak. A systematic evaluation of nosocomial outbreaks can be a valuable tool for education of staff in the absence of an outbreak, but may be even more helpful for potentially cost-intensive decisions in the acute outbreak setting on the ward.


id: cord-029880-mhmvc0kq
author: Sy, Charlle
title: Policy Development for Pandemic Response Using System Dynamics: a Case Study on COVID-19
date: 2020-07-29
extension: .txt
mime: text/plain
words: 2588
sentence: 105
flesch: 37
cache: cache/cord-029880-mhmvc0kq.txt
txt: txt/cord-029880-mhmvc0kq.txt
summary:
  Furthermore, despite its unpredictability, there is evidence that suggests externalities such as fear-driven behavioral changes could potentially be the largest contributor to the economic costs of disease outbreaks. Mathematical and statistical models have been used to gain a better understanding of disease outbreaks and aid in emergency preparedness and response decision-making.


id: cord-016404-gyilma0h
author: Shaffer, Loren
date: 2007
extension: .txt
mime: text/plain
words: 2916
sentence: 121
flesch: 37
cache: cache/cord-016404-gyilma0h.txt
txt: txt/cord-016404-gyilma0h.txt
title:
  Early Outbreak Detection Using an Automated Data Feed of Test Orders from a Veterinary Diagnostic Laboratory

summary:
  The results of this study demonstrated the stability and timely availability of test order data for companion animals and how those data might be used in a prospective surveillance to detect disease outbreaks. We investigated the feasibility of using veterinary laboratory test orders in a prospective system to detect outbreaks of disease earlier compared to traditional reporting methods.


id: cord-280285-mwuix1tv
author: Inkster, T.
date: 2017-05-06
extension: .txt
mime: text/plain
words: 3343
sentence: 164
flesch: 47
cache: cache/cord-280285-mwuix1tv.txt
txt: txt/cord-280285-mwuix1tv.txt
title:
  Consecutive yearly outbreaks of respiratory syncytial virus in a haemato-oncology ward and efficacy of infection control measures

summary:
  During a large outbreak of RSV in a German haematology unit, 20% of RSV patients had recurrent positive tests even after two consecutive negative PCR tests. The implementation of broad precautions applicable to the entire unit is recommended during RSV outbreaks in preference to those focusing only on specific patients [1] .


id: cord-003932-25dcnext
author: Corpus, Carla
title: Prevention of respiratory outbreaks in the rehabilitation setting
date: 2019-10-09
extension: .txt
mime: text/plain
words: 3472
sentence: 131
flesch: 34
cache: cache/cord-003932-25dcnext.txt
txt: txt/cord-003932-25dcnext.txt
summary:
  8 Rehabilitation settings are environments conducive to nosocomial RV transmission due to the nature of the patient population, which is being mobilised daily in common spaces. disease: respiratory infection outbreaks in institutions and public hospitals Universal mask usage for reduction of respiratory viral infections after stem cell transplant: a prospective trial Advancing infection prevention and antimicrobial stewardship through improvement science Working with symptoms of a respiratory infection: staff who care for high-risk individuals Transmission of influenza: implications for control in health care settings Respiratory virus infections after marrow transplant: the Fred Hutchinson cancer research center experience Acknowledgements We would like to thank all staff at St. John's Rehabilitation Centre for their engagement in the development of these practice changes as well as the support from Infection Prevention & Control, Occupational Health & Safety, Human Resources, Unit Managers and the Senior Leadership Team.


id: cord-271862-jk37ej4c
author: Qian, Hua
title: Indoor transmission of SARS-CoV-2
date: 2020-04-07
extension: .txt
mime: text/plain
words: 3819
sentence: 211
flesch: 58
cache: cache/cord-271862-jk37ej4c.txt
txt: txt/cord-271862-jk37ej4c.txt
summary:
  Home outbreaks were the dominant category (254 of 318 outbreaks; 79.9%), followed by transport (108; 34.0%; note that many outbreaks involved more than one venue category). Because home outbreaks dominated, the changes in the temporal profile of the number of cases ( Figure 2A ) closely follows that of the home outbreaks ( Figure 2B ).


id: cord-003507-22ylifqo
author: Kelly, J. Daniel
date: 2019-03-07
extension: .txt
mime: text/plain
words: 4483
sentence: 163
flesch: 44
cache: cache/cord-003507-22ylifqo.txt
txt: txt/cord-003507-22ylifqo.txt
title:
  Projections of Ebola outbreak size and duration with and without vaccine use in Équateur, Democratic Republic of Congo, as of May 27, 2018

summary:
  List of 21 prior Ebola outbreaks from 1976 to 2016 by time period, country, confirmed/probable reported and time series case count, outbreak inclusion into the regression and stochastic models. We modeled Ebola virus transmission using a stochastic branching process model that included reproduction numbers from past Ebola outbreaks and a particle filtering method to generate a probabilistic projection of the outbreak size and duration conditioned on its reported trajectory to date; modeled using high (62%), low (44%), and zero (0%) estimates of vaccination coverage (after deployment).


id: cord-277765-koa8ao10
author: Stoddard, M.
date: 2020-11-07
extension: .txt
mime: text/plain
words: 4783
sentence: 192
flesch: 48
cache: cache/cord-277765-koa8ao10.txt
txt: txt/cord-277765-koa8ao10.txt
title:
  COVID-19 isolation and containment strategies for ships: Lessons from the USS Theodore Roosevelt outbreak

summary:
  key: cord-277765-koa8ao10 authors: Stoddard, M.; Johnson, K.; White, D.; Nolan, R.; Hochberg, N.; Chakravarty, A. title: COVID-19 isolation and containment strategies for ships: Lessons from the USS Theodore Roosevelt outbreak date: 2020-11-07 journal: nan DOI: 10.1101/2020.11.05.20226712 sha: doc_id: 277765 cord_uid: koa8ao10 The control of shipborne disease outbreaks represents a vexing but entirely predictable challenge at the start of any pandemic. The challenge of managing shipborne disease outbreaks has been evident throughout history: the concept of quarantine itself dates back to restrictions placed on sailors in the era of the Black Death; in 1918, troopships were instrumental in spreading the influenza pandemic (Baraniuk, 2020); and in recent years, the cruise ship industry (COVID-19 pandemic on cruise ships, 2020; El Damanhoury and Cullinane, 2019; Hines, 2020) and the .


id: cord-103286-k1po7bzb
author: Jean, K.
date: 2020-07-11
extension: .txt
mime: text/plain
words: 5337
sentence: 241
flesch: 44
cache: cache/cord-103286-k1po7bzb.txt
txt: txt/cord-103286-k1po7bzb.txt
title:
  Assessing the impact of preventive mass vaccination campaigns on yellow fever outbreaks in Africa : a population-level self-controlled case-series study

summary:
  key: cord-103286-k1po7bzb authors: Jean, K.; Raad, H.; Gaythorpe, K. A. M.; Hamlet, A.; Mueller, J. E.; Hogan, D.; Mengistu, T.; Whitaker, H. J.; Hocine, M. N. title: Assessing the impact of preventive mass vaccination campaigns on yellow fever outbreaks in Africa : a population-level self-controlled case-series study date: 2020-07-11 journal: nan DOI: 10.1101/2020.07.09.20147355 sha: doc_id: 103286 cord_uid: k1po7bzb Introduction: The Eliminate Yellow fever Epidemics (EYE) strategy was launched in 2017 in response to the resurgence of yellow fever in Africa and the Americas. Methods: We used the self-controlled case series (SCCS) method to assess the association between the occurrence of yellow fever outbreaks and the implementation of PMVCs at the province level in the African endemic region.


id: cord-023510-gd4phncm
author: Chuo, Hsin-You
title: Theme Park Visitors’ Responses to the SARS Outbreak in Taiwan
date: 2007-05-02
extension: .txt
mime: text/plain
words: 5266
sentence: 186
flesch: 42
cache: cache/cord-023510-gd4phncm.txt
txt: txt/cord-023510-gd4phncm.txt
summary:
  Most SARS cases have occurred in Mainland China, Hong Kong, Taiwan, and Canada. Mainland China reported the largest number of SARS infections (5,327) and deaths (348), followed by Hong Kong (1,755; 298) and Taiwan (671; 84) (CDC, 2003; WHO, 2003c) .


id: cord-016109-vbzy11hc
author: Damjanovic, V.
title: Outbreaks of Infection in the ICU: What’s up at the Beginning of the Twenty-First Century?
date: 2011-08-10
extension: .txt
mime: text/plain
words: 5497
sentence: 269
flesch: 45
cache: cache/cord-016109-vbzy11hc.txt
txt: txt/cord-016109-vbzy11hc.txt
summary:
  Two reports described ICU outbreaks caused by Hansenula anomala, an opportunistic yeast first reported from a Liverpool, UK, NICU in 1986 In conclusion, new trends as well as old confirm what we indicated in the previous edition of this book, which is that to control and prevent ICU outbreaks, surveillance cultures and SDD should be integrated in routine infection-control measures.


id: cord-255704-cg3j4jac
author: Gelber, Shari E.
title: Hospital-acquired viral pathogens in the neonatal intensive care unit
date: 2002-10-31
extension: .txt
mime: text/plain
words: 5555
sentence: 233
flesch: 40
cache: cache/cord-255704-cg3j4jac.txt
txt: txt/cord-255704-cg3j4jac.txt
summary:
  A multinursery outbreak in Wisconsin Vertical transmission of hepatitis A resulting in an outbreak in a neonatal intensive care unit Hepatitis A outbreak in a neonatal intensive care unit: Risk factors for transmission and evidence of prolonged viral excretion among preterm infants Studies on the maternal-infant transmission of the viruses which cause acute hepatitis Report of the Committee on Infectious Diseases Profile of enterovirus disease in the first two weeks of life Epidemiology of neonatal enterovirus infection Nosocomial infection with ECHO virus type 31 in a neonatal intensive care unit An outbreak due to echovirus type 30 in a neonatal unit in France in 1997: usefulness of PCR diagnosis Usefulness of nested PCR and sequence analysis in a nosocomial outbreak of neonatal enterovirus infection Severe neonatal echovirus 17 infection during a nursery outbreak A new-born baby outbreak of echovirus type 33 infection A community and intensive care nursery outbreak of coxsackievirus B5 meningitis Coxsackie B virus epidemiology and neonatal infection in Belgium Fatal Coxsackie A9 virus infection during an outbreak in a neonatal unit Nosocomial respirator3, syncytial virus infections in an intensive care nursery: Rapid diagnosis by direct immunofluorescence Nosocomial respiratory svncvtial ~irus infections: The costeffectiveness and cost-benefit of infection control Prevention of respiratory syncytial virus infections: Indications for the use of palivizumab and update on the use of RSV-IGIV The use of palivizumab monoclonal antibody to control an outbreak of respirator syncytial ~irus infection in a special care baby unit Outbreaks of influenza A virus infection in neonatal intensive care units Outbreak of influenza in a neonatal intensive care unit An outbreak of influenza A in a neonatal intensive care unit Influenza A virus outbreak in a neonatal intensive care unit Hong Kong influenza in a neonatal unit Epidemiology and prevention of pediatric viral respiratory, infections in health-care institutions Adenovirus wpe 8 conjunctivitis outbreak in a neonatal intensive care unit An epidemic of adenovirus 7a infection in a neonatal nursery: Course, morbidity, and management Description of an adenovirus type 8 outbreak in hospitalized neonates born prematurely Neonatal adenovirus infection: Four patients and review of the literature Outbreak of parainfluenza virus type 3 in an intermediate care neonatal nursery Outbreak of parainfluenza ~'irus type 3 in a neonatal nurseu Parainfluenza ~33e 3 viral outbreak in a neonatal nursery Neonatal nosocomial respiratory infection with coronavirns: A prospective study in a neonatal intensive care unit Nosocomial infections due to human coronaviruses in the newborn Coronavirus-related nosocomial viral respiratory infections in a neonatal and paediatric intensive care unit: A prospective study Antibody to Varicella-Zoster virus in parturient women and their offspring during the first year of life Outbreak and control of varicella in a neonatal intensive care unit Outbreak of varicelia in a newborn intensive care nursery Transplacental immunity to varicella-zoster virus in extremely low birthweight infants Antibody to varicella zoster virus in low-birth-weight newborn infants Varicella exposure in a neonatal intensive care unit: Emergency management and control measures Persistence of immunity to varicella-zoster virus after vaccination of healthcare workers Varicella disease after introduction of varicella vaccine in the United States Natural history of neonatal herpes simplex virus infections in the acyclovir era Transmission of herpes-simplex virus type 1 in a nursery for the newborn. Low gestational age and birth weight, incomplete transfer of maternal antibody, and atypical clinical presentations put these patients at increased risk of complications from viral infections.


id: cord-001219-517gka4h
author: Timpka, Toomas
date: 2014-03-07
extension: .txt
mime: text/plain
words: 5809
sentence: 204
flesch: 32
cache: cache/cord-001219-517gka4h.txt
txt: txt/cord-001219-517gka4h.txt
title:
  Intentions to Perform Non-Pharmaceutical Protective Behaviors during Influenza Outbreaks in Sweden: A Cross-Sectional Study following a Mass Vaccination Campaign

summary:
  We administered a cross-sectional telephone survey to a representative sample (n = 443) of the Swedish adult population to examine whether self-reported intentions to improve personal hygiene and increase social distancing during influenza outbreaks could be explained by trust in official information, self-reported health (SF-8), sociodemographic factors, and determinants postulated in protection motivation theory, namely threat appraisal and coping appraisal. Protective behavior associated with influenza outbreaks has also been investigated with regard to general estimates of health status [15] , but few studies have used validated measures of self-rated health as a means for the sub categorization.


id: cord-016819-6r4qf63o
author: Radosavljevic, Vladan
title: A New Method of Differentiation Between a Biological Attack and Other Epidemics
date: 2012-08-31
extension: .txt
mime: text/plain
words: 5918
sentence: 262
flesch: 41
cache: cache/cord-016819-6r4qf63o.txt
txt: txt/cord-016819-6r4qf63o.txt
summary:
  People who are accidentally included in natural outbreaks (as a source or reservoir of infection) and look like perpetrators at fi rst sight, are always highly afraid and cooperative. In natural outbreaks usually there is no motive, but if we fi nd them, motive(s) are commonplace and simple.


id: cord-312103-lakwurn0
author: Mondor, Luke
title: Timeliness of Nongovernmental versus Governmental Global Outbreak Communications
date: 2012-07-17
extension: .txt
mime: text/plain
words: 1493
sentence: 51
flesch: 33
cache: cache/cord-312103-lakwurn0.txt
txt: txt/cord-312103-lakwurn0.txt
summary:
  It is possible that enhancements in nongovernmental outbreak reporting systems also contributed to improvements in governmental outbreak reporting timeliness over the study period, but we were unable to test this assumption with the current data. Emerg Infect Dis DOI: 10.3201/eid1807.120249 sha: doc_id: 312103 cord_uid: lakwurn0 To compare the timeliness of nongovernmental and governmental communications of infectious disease outbreaks and evaluate trends for each over time, we investigated the time elapsed from the beginning of an outbreak to public reporting of the event.


id: cord-306332-ug6pare2
author: Chen, Ze-Liang
date: 2020-05-05
extension: .txt
mime: text/plain
words: 2030
sentence: 85
flesch: 47
cache: cache/cord-306332-ug6pare2.txt
txt: txt/cord-306332-ug6pare2.txt
title:
  From severe acute respiratory syndrome-associated coronavirus to 2019 novel coronavirus outbreak: similarities in the early epidemics and prediction of future trends

summary:
  Global trends in emerging infectious diseases The challenge of emerging and re-emerging infectious diseases Pneumonia of unknown etiology in Wuhan, China: potential for international spread via commercial air travel The continuing 2019-nCoV epidemic threat of novel coronaviruses to global health -the latest 2019 novel coronavirus outbreak in Wuhan Preliminary estimation of the basic reproduction number of novel coronavirus (2019-nCoV) in China, from 2019 to 2020: a data-driven analysis in the early phase of the outbreak Bats are natural reservoirs of SARS-like coronaviruses RNA based mNGS approach identifies a novel human coronavirus from two individual pneumonia cases in 2019 Wuhan outbreak Return of the coronavirus: nCoV Chinese spring festival editorial Transmission and epidemiological characteristics of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infected pneumonia (COVID-19): preliminary evidence obtained in comparison with 2003-SARS Infection control and SARS transmission among healthcare workers Risks to healthcare workers with emerging diseases: lessons from MERS-CoV, Ebola, SARS, and avian flu Epidemiological analysis on SARS clustered cases in Guangdong province (in Chinese) However, as we had participated in the epidemiological investigations of early SARS cases in 2003, we had collected important data about the early stages of the outbreak.


id: cord-021230-x6re8787
author: Bdeir, Fadl
title: Emerging coordination and knowledge transfer process during disease outbreak
date: 2012-05-07
extension: .txt
mime: text/plain
words: 6759
sentence: 294
flesch: 38
cache: cache/cord-021230-x6re8787.txt
txt: txt/cord-021230-x6re8787.txt
summary:
  This is the main reason for referring to such coordination systems as 'dynamic' since self-organising is inherited from adaptability, resilience, and flexibility. It can be defined as when individuals or organisations establish communication networks (CNs) outside the standard coordination structure to 'get things done' (Baker, 1981; Han, 1983) .


id: cord-276254-q04hqra2
author: Paul, Kishor Kumar
date: 2020-06-02
extension: .txt
mime: text/plain
words: 3830
sentence: 140
flesch: 42
cache: cache/cord-276254-q04hqra2.txt
txt: txt/cord-276254-q04hqra2.txt
title:
  Comparing insights from clinic-based versus community-based outbreak investigations: a case study of chikungunya in Bangladesh

summary:
  Inference from community cases plus controls from same household J o u r n a l P r e -p r o o f Incorporating controls from the households where cases reside allowed us to assess additional potential risk factors for being a case. The epidemic curve was constructed using symptom onset date of chikungunya cases.


id: cord-018646-fqy82sm6
author: Huremović, Damir
title: Brief History of Pandemics (Pandemics Throughout History)
date: 2019-05-16
extension: .txt
mime: text/plain
words: 6865
sentence: 288
flesch: 53
cache: cache/cord-018646-fqy82sm6.txt
txt: txt/cord-018646-fqy82sm6.txt
summary:
  Described in detail by Procopius, John of Ephesus, and Evagrius, the Justinian epidemic is the earliest clearly documented example of the actual (bubonic) plague outbreak [16] . Long-term effects of in utero influenza exposure in the Post-1940 U.S. population America's forgotten pandemic: the influenza of 1918 The spread, treatment, and prevention of HIV-1: evolution of a global pandemic Estimates of global, regional, and national incidence, prevalence, and mortality of HIV, 1980-2015: the global burden of disease study 2015 Academy of consultation-Liaison psychiatry, HIV Psychiatry Bibliography Meta-analysis of the relationship between HIV infection and risk for depressive disorders Cognitive behavioural therapy for adherence and depression in patients with HIV: a three-arm randomised controlled trial The last major outbreak of smallpox (Yugoslavia, 1972): the importance of historical reminders Shining light on dark winter Evaluating public health responses to reintroduced smallpox via dynamic, socially structured, and spatially distributed metapopulation models Extracting key information from historical data to quantify the transmission dynamics of smallpox Responding to global infectious disease outbreaks: lessons from SARS on the role of risk perception, communication and management Summary of probable SARS cases with onset of illness from 1 Was SARS a mental health catastrophe?


id: cord-266480-u8o4eitu
author: Colubri, Andrés
title: Preventing outbreaks through interactive, experiential real-life simulations
date: 2020-09-02
extension: .txt
mime: text/plain
words: 3169
sentence: 141
flesch: 41
cache: cache/cord-266480-u8o4eitu.txt
txt: txt/cord-266480-u8o4eitu.txt
summary:
  This data reflects the spread of the virtual pathogen among the participants with a granularity that is nearly impossible to replicate in the real world--and it can be used like real outbreak data for epidemiological modeling and visualization. OO simulations at SMA.


id: cord-004006-tfp2idq2
author: Hale, Alison C.
date: 2019-11-28
extension: .txt
mime: text/plain
words: 8152
sentence: 294
flesch: 42
cache: cache/cord-004006-tfp2idq2.txt
txt: txt/cord-004006-tfp2idq2.txt
title:
  A real-time spatio-temporal syndromic surveillance system with application to small companion animals

summary:
  In this paper we describe the first real-time syndromic surveillance system that conducts integrated spatio-temporal analysis of data from a national network of veterinary premises for the early detection of disease outbreaks in small animals. Prospective space-time scan statistics have also been used in syndromic surveillance systems for the early detection of disease outbreaks 39, 42 .


id: cord-288187-84oj3xtp
author: Khan, Ali S.
title: Forensic public health: epidemiological and microbiological investigations for biosecurity
date: 2019-12-06
extension: .txt
mime: text/plain
words: 8427
sentence: 317
flesch: 30
cache: cache/cord-288187-84oj3xtp.txt
txt: txt/cord-288187-84oj3xtp.txt
summary:
  Novel pathogens and transmission methods can easily be exploited to cause disease outbreaks. Bioterrorism-related anthrax: the first 10 cases reported in the United States Antimicrobial susceptibility testing: a review of general principles and contemporary practices Anthrax molecular epidemiology and forensics: using the appropriate marker for different evolutionary scales Public health preparedness for biological terrorism in the USA The unacceptable risks of man-made pandemic How Canadian researchers reconstituted an extinct poxvirus for $100,000 using mailorder DNA A Dictionary of Epidemiology Genome-editing technologies for gene and cell therapy Phylogenetic analysis of human influenza A/H3N2 viruses isolated in 2015 in Germany indicates significant genetic divergence from vaccine strains Gene therapy returns to centre stage Construction of an infectious horsepox virus vaccine from chemically synthesized DNA fragments Host and viral traits predict zoonotic spillover from mammals Electrophoretic typing Parity among the randomly amplified polymorphic DNA method, multilocus enzyme electrophoresis, and Southern blot hybridization with the moderately repetitive DNA probe Ca 3 for fingerprinting Candida albicans Monitoring of ebola virus makona evolution through establishment of advanced genomic capacity in liberia Bacillus anthracis comparative genome analysis in support of the Amerithrax investigation Emerging infectious diseases Methods for subtyping and molecular comparison of human viral genomes Alloenzyme electrophoresis Gain eof-function research: ethical analysis Laboratory-guided detection of disease outbreaks: three generations of surveillance systems Microbial Threats to Health: Emergence, Detection and Response Mail-order CRISPR kits allow absolutely anyone to hack DNA The ins and outs of DNA fingerprinting of infectious fungi Laboratory procedures for the epidemiological analysis of microorganisms PulseNet: the molecular subtyping network for foodborne bacterial disease surveillance, United States How to select and interpret molecular strain typing methods for epidemiological studies of bacterial infections: a review for healthcare epidemiologists Overview and significance of molecular methods: what role for molecular epidemiology? Genetic characterization of six parasitic protozoa: parity between random primer DNA typing and multilocus enzyme electrophoresis A large community outbreak of salmonellosis caused by intentional contamination of restaurant salad bars Tracing isolates of bacterial species by multilocus variable number of tandem repeat analysis (MLVA)


id: cord-298870-22lf1cp5
author: Timen, Aura
title: Control Measures Used during Lymphogranuloma Venereum Outbreak, Europe
date: 2008-04-17
extension: .txt
mime: text/plain
words: 3447
sentence: 154
flesch: 42
cache: cache/cord-298870-22lf1cp5.txt
txt: txt/cord-298870-22lf1cp5.txt
summary:
  In the early days of the outbreak, the potential for international spread was recognized because patients reported having had sexual contacts in other countries such as Belgium, the United Kingdom, and France (8) . Revision of the International Health Regulations Lymphogranuloma venereum Preliminary report of an outbreak of lymphogranuloma venereum in homosexual men in the Netherlands, with implications for other countries in western Europe Resurgence of lymphogranuloma venereum in Western Europe: an outbreak of Chlamydia trachomatis serovar l2 proctitis in the Netherlands among men who have sex with men Increasing rates of sexual transmitted diseases in homosexual men in Western Europe and the United States: why? Canadian LGV working group.


id: cord-022002-6edzmj7n
author: Mitruka, Kiren
title: Cruise Ship Travel
date: 2009-05-15
extension: .txt
mime: text/plain
words: 9689
sentence: 420
flesch: 46
cache: cache/cord-022002-6edzmj7n.txt
txt: txt/cord-022002-6edzmj7n.txt
summary:
  asp?section=transportation&obj=cruise.htm&cssNav=browsecyb Infectious diseases on cruise ships Cruise ships: high-risk passengers and the global spread of new influenza viruses Outbreaks of acute gastroenteritis on cruise ships and on land: identification of a predominant circulating strain of norovirus-United States Norovirus transmission on cruise ship Outbreak of Legionnaires' disease among cruise ship passengers exposed to a contaminated whirlpool spa Outbreaks of gastrointestinal diseases on cruise ships: lessons from three decades of progress International Convention for the Safety of Life at Sea (SOLAS) Available from: www.imo.org./home.asp?flash=false The contribution of the North American cruise industry to the US economy in Business Research and Economic Advisors for International Council of Cruise Lines (US) The safety of cruise ship passengers and crew members is of paramount importance to cruise lines.


id: cord-011129-btaxvmsr
author: Di Paola, Nicholas
title: Viral genomics in Ebola virus research
date: 2020-05-04
extension: .txt
mime: text/plain
words: 9445
sentence: 304
flesch: 28
cache: cache/cord-011129-btaxvmsr.txt
txt: txt/cord-011129-btaxvmsr.txt
summary:
  identification of transmission routes using pathogen deep-sequence data The pathogenesis of Ebola virus disease Filovirus pathogenesis and immune evasion: insights from Ebola virus and Marburg virus Characterization of host immune responses in Ebola virus infections Tissue-based class control: the other side of tolerance Uveal involvement in Marburg virus disease Spermatogene Übertragung des Persistence and genetic stability of Ebola virus during the outbreak in Kikwit, Democratic Republic of the Congo Marburg-virus disease in Kenya Ebola virus transmission caused by persistently infected survivors of the 2014-2016 outbreak in West Africa Resurgence of Ebola virus disease in Guinea linked to a survivor with virus persistence in seminal fluid for more than 500 days New evidence of long-lasting persistence of Ebola virus genetic material in semen of survivors Ebola virus persistence in semen of male survivors Active Ebola virus replication and heterogeneous evolutionary rates in EVD survivors Post-Ebola syndrome Sequelae of Ebola virus disease: the emergency within the emergency Identification and pathological characterization of persistent asymptomatic Ebola virus infection in rhesus monkeys Ebola virus disease complicated by late-onset encephalitis and polyarthritis Late Ebola virus relapse causing meningoencephalitis: a case report An update on ocular complications of Ebola virus disease Persistence of Ebola virus in ocular fluid during convalescence Ocular immune privilege and transplantation Ebola RNA persistence in semen of Ebola virus disease survivors -final report Clinical, virologic, and immunologic follow-up of convalescent Ebola hemorrhagic fever patients and their household contacts, Kikwit, Democratic Republic of the Congo A longitudinal study of Ebola sequelae in Liberia Persistence and sexual transmission of filoviruses Tissue and cellular tropism, pathology and pathogenesis of Ebola and Marburg viruses Persistent Marburg virus infection in the testes of nonhuman primate survivors A case of human Lassa virus infection with robust acute T-cell activation and long-term virus-specific T-cell responses Possible sexual transmission of Crimean-Congo hemorrhagic fever Lassa fever: epidemiology, clinical features, and social consequences Persistent Crimean-Congo hemorrhagic fever virus infection in the testes and within granulomas of non-human primates with latent tuberculosis Persistence of Ebola virus after the end of widespread transmission in Liberia: an outbreak report Persistent infection with Ebola virus under conditions of partial immunity Ebola virus persistence in breast milk after no reported illness: a likely source of virus transmission from mother to child Immune-mediated systemic vasculitis as the proposed cause of sudden-onset sensorineural hearing loss following Lassa virus exposure in cynomolgus macaques Persistence of Lassa virus associated with severe systemic arteritis in convalescing guinea pigs (Cavia porcellus) High prevalence of both humoral and cellular immunity to Zaire ebolavirus among rural populations in Gabon Prevalence of infection among asymptomatic and paucisymptomatic contact persons exposed to Ebola virus in Guinea: a retrospective, cross-sectional observational study Asymptomatic infection and unrecognised Ebola virus disease in Ebola-affected households in Sierra Leone: a cross-sectional study using a new non-invasive assay for antibodies to Ebola virus Human asymptomatic Ebola infection and strong inflammatory response Risk factors associated with Ebola and Marburg viruses seroprevalence in blood donors in the Republic of Congo Risk factors for Zaire ebolavirusspecific IgG in rural Gabonese populations Unique human immune signature of Ebola virus disease in Guinea Reverse genetics demonstrates that proteolytic processing of the Ebola virus glycoprotein is not essential for replication in cell culture Recovery of infectious Ebola virus from complementary DNA: RNA editing of the GP gene and viral cytotoxicity Use of reverse genetics to inform Ebola outbreak responses Therapeutic strategies to target the Ebola virus life cycle Effects of life history and ecology on virus evolutionary potential Role of antibodies in protection against Ebola virus in nonhuman primates immunized with three vaccine platforms Immune parameters correlate with protection against Ebola virus infection in rodents and nonhuman primates Properties of replication-competent vesicular stomatitis virus vectors expressing glycoproteins of filoviruses and arenaviruses Identification of the Ebola virus glycoprotein as the main viral determinant of vascular cell cytotoxicity and injury Efficacy and effectiveness of an rVSV-vectored vaccine in preventing Ebola virus disease: final results from the Guinea ring vaccination, open-label, cluster-randomised trial (Ebola Ça Suffit!) Here, we describe how genomics has been historically used to investigate Ebola virus disease outbreaks and how new technologies allow for rapid, large-scale data generation at the point of care.


id: cord-004586-i8tacj63
date: 2007-10-05
extension: .txt
mime: text/plain
words: 9355
sentence: 376
flesch: 18
cache: cache/cord-004586-i8tacj63.txt
txt: txt/cord-004586-i8tacj63.txt
title:
  Empfehlung zur Prävention nosokomialer Infektionen bei neonatologischen Intensivpflegepatienten mit einem Geburtsgewicht unter 1500 g: Mitteilung der Kommission für Krankenhaushygiene und Infektionsprävention beim Robert Koch-Institut

summary:
  Patienten mit Glycopeptidresistenten Enterokokken (GRE) / Vancomycinresistenten Enterokokken (VRE) Use of DNA fingerprinting in decision making for considering closure of neonatal intensive care units because of Pseudomonas aeruginosa bloodstream infections Pseudomonas aeruginosa infections in a neonatal intensive care unit Enterobacter cloacae and Pseudomonas aeruginosa polymicrobial bloodstream infections traced to extrinsic contamination of a dextrose multidose vial Outbreak of Pseudomonas putida bacteraemia in a neonatal intensive care unit Sepsis in a newborn due to Pseudomonas aeruginosa from a contaminated tub bath Ecology of Pseudomonas aeruginosa in the intensive care unit and the evolving role of water outlets as a reservoir of the organism Pseudomonas aeruginosa in a neonatal intensive care unit: reservoirs and ecology of the nosocomial pathogen Enteral feeding tubes are a reservoir for nosocomial antibiotic-resistant pathogens Neonatal infections with Pseudomonas aeruginosa associated with a water-bath used to thaw fresh frozen plasma Reservoirs of nosocomial pathogens in neonatal intensive care unit A comparison of the bacteria found on the hands of ‚homemakers' and neonatal intensive care unit nurses Defining pertussis epidemiology: clinical, microbiologic and serologic perspectives Bordetella pertussis infection: pathogenesis, diagnosis, management, and the role of protective immunity Early infantile pertussis; increasingly prevalent and potentially fatal Pertussis: a continuing hazard for healthcare facilities Pertussis: an underappreciated risk for nosocomial outbreaks Nosocomial pertussis outbreak among adult patients and healthcare workers An outbreak of pertussis in a hematology-oncology care unit: implications for adult vaccination policy Azithromycin prophylaxis during a hospitalwide outbreak of a pertussis-like illness Congenital tuberculosis in a neonatal intensive care unit: case report, epidemiological investigation, and management of exposures Congenital tuberculosis in a neonatal intensive care Mycobacterium tuberculosis transmission in a newborn nursery and maternity ward Neonatal exposure to active pulmonary tuberculosis in a health care professional Connatal tuberculosis in an extremely low birth weight infant: case report and management of exposure to tuberculosis in a neonatal intensive care unit Zur Frage des geeigneten Atemschutzes vor luftübertragenen Infektionserregern. bloodstream infections in a nursery associated with contaminated aerosols and air conditioners Successful control of an Acinetobacter baumannii outbreak in a neonatal intensive care unit An outbreak of neonatal infection with Acinetobacter linked to contaminated suction catheters Molecular epidemiological typing of Enterobacter cloacae isolates from a neonatal intensive care unit: three-year prospective study Enterobacter cloacae bloodstream infections in pediatric patients traced to a hospital pharmacy Management of an outbreak of Enterobacter cloacae in a neonatal unit using simple preventive measures Outbreak investigation of nosocomial enterobacter cloacae bacteraemia in a neonatal intensive care unit Multiresistant Klebsiella pneumoniae in a neonatal nursery: the importance of maintenance of infection control policies and procedures in the prevention of outbreaks A simultaneous outbreak on a neonatal unit of two strains of multiply antibiotic resistant Klebsiella pneumoniae controllable only by ward closure Ciprofloxacin treatment in newborns with multidrug-resistant nosocomial Pseudomonas infections Failure of systemic antibiotics to eradicate gram-negative bacilli from the airway of mechanically ventilated very low-birth-weight infants Purulence and gram-negative bacilli in tracheal aspirates of mechanically ventilated very low birth weight infants Nosocomial outbreak of Serratia marcescens in a neonatal intensive care unit Serratia marcescens in the neonatal intensive care unit: re-emphasis of the potentially devastating sequelae Molecular epidemiology of Serratia marcescens outbreaks in two neonatal intensive care units Clustering of Serratia marcescens infections in a neonatal intensive care unit Overview of Nosocomial Infections Caused by Gram-Negative Bacilli Extended spectrum beta lactamase-producing Klebsiella pneumoniae infections: a review of the literature Outbreak of extended-spectrum beta-lactamaseproducing Klebsiella pneumoniae in a neonatal intensive care unit linked to artificial nails Extended spectrum beta-lactamase (ESBL)-induced antibiotics resistance in gram-negative agents: what should be watched in intensive care medicine? Extended-spectrum betalactamase-producing Klebsiella pneumoniae in a neonatal intensive care unit: risk factors for infection and colonization Antimicrobial Resistance and Its Control in Pediatrics The effect of antibiotic rotation on colonization with antibiotic-resistant bacilli in a neonatal intensive care unit Neonatal candidosis: clinical picture, management controversies and consensus, and new therapeutic options Fungal infection in the very low birth weight infant Empirical therapy for neonatal candidemia in very low birth weight infants Risk factors for invasive fungal infection in neonates Endotracheal colonization with Candida enhances risk of systemic candidiasis in very low birth weight neonates Candida tropicalis in a neonatal intensive care unit: epidemiologic and molecular analysis of an outbreak of infection with an uncommon neonatal pathogen Risk factors for pulmonary candidiasis in preterm infants with a birth weight of less than 1250 g Dexamethasone therapy and Candida sepsis in neonates less than 1250 grams Risk factors associated with candidaemia in the neonatal intensive care unit: a case-control study Systemic candidal infections associated with use of peripheral venous catheters in neonates: a 9-year experience Risk factors for candidemia in critically ill infants: a matched case-control study Neonatal candidemia and end-organ damage: a critical appraisal of the literature using meta-analytic techniques Antimykotische Therapie der vaginalen Hefepilz-Kolonisation von Schwangeren zur Verhütung von Kandidamykosen beim Neugeborenen Outbreak of Candida bloodstream infections associated with retrograde medication administration in a neonatal intensive care unit Candida parapsilosis bloodstream infections in neonatal intensive care unit patients: epidemiologic and laboratory confirmation of a common source outbreak Prevention of Candida colonization prevents infection in a neonatal unit Prophylactic oral antifungal agents to prevent systemic candida infection in preterm infants Neonatal candidiasis: prophylaxis and treatment Fluconazole for prophylaxis against candidal rectal colonization in the very low birth weight infant Prophylactic fluconazole is effective in preventing fungal colonization and fungal systemic infections in preterm neonates: a single-center, 6-year, retrospective cohort study Fluconazole prophylaxis against fungal colonization and infection in preterm infants Twice weekly fluconazole prophylaxis for prevention of invasive Candida infection in high-risk infants of < 1000 grams birth weight Fluconazole prophylaxis prevents invasive fungal infection in high-risk, very low birth weight infants Impact of fluconazole prophylaxis on incidence and outcome of invasive candidiasis in a neonatal intensive care unit Reducing Candida infections during neonatal intensive care: management choices, infection control, and fluconazole prophylaxis Emergence of fluconazole resistance in a Candida parapsilosis strain that caused infections in a neonatal intensive care unit Eradication of methicillin-resistant Staphylococcus aureus from a neonatal intensive care unit by active surveillance and aggressive infection control measures Methicillin-resistant Staphylococcus aureus in neonatal intensive care unit Microbiologic surveillance using nasal cultures alone is sufficient for detection of methicillin-resistant Staphylococcus aureus isolates in neonates


id: cord-290264-pv7ijdnx
author: Perakslis, Eric
title: A Primer on Biodefense Data Science for Pandemic Preparedness
date: 2020-04-10
extension: .txt
mime: text/plain
words: 2350
sentence: 109
flesch: 53
cache: cache/cord-290264-pv7ijdnx.txt
txt: txt/cord-290264-pv7ijdnx.txt
summary:
  The coronavirus outbreak is sweeping the globe with outbreaks reported on every continent except Antarctica as of March 2020. The coronavirus outbreak is sweeping the globe with outbreaks reported on every continent except Antarctica as of March 2020.


id: cord-274332-vuupgg7i
author: Robinson, Esther R
title: Genomics and outbreak investigation: from sequence to consequence
date: 2013-04-29
extension: .txt
mime: text/plain
words: 4550
sentence: 156
flesch: 28
cache: cache/cord-274332-vuupgg7i.txt
txt: txt/cord-274332-vuupgg7i.txt
summary:
  Such outbreaks can range in size from a few individuals, for instance in a family outbreak or an outbreak on a hospital ward, to epidemics that rage across countries or continents. Investigation of a suspected outbreak has two aims: termination of the cluster of disease and prevention of similar occurrences by understanding how such outbreaks originate.


id: cord-266526-8csl9md0
author: Li, Shuai
date: 2020-10-24
extension: .txt
mime: text/plain
words: 3891
sentence: 137
flesch: 40
cache: cache/cord-266526-8csl9md0.txt
txt: txt/cord-266526-8csl9md0.txt
title:
  Integrated environment-occupant-pathogen information modeling to assess and communicate room-level outbreak risks of infectious diseases

summary:
  Three add-in functions were developed to help users visualize the interior layout of the building 441 and color-coded rooms with their corresponding risk levels, as well as search specific room-442 related disease outbreak risk information. With the new streams of risk information, customizable interventions can be 582 designed.


id: cord-275646-4hpfw9jk
author: Chen, Simiao
date: 2020-09-20
extension: .txt
mime: text/plain
words: 4838
sentence: 180
flesch: 41
cache: cache/cord-275646-4hpfw9jk.txt
txt: txt/cord-275646-4hpfw9jk.txt
title:
  Buying time for an effective epidemic response: The impact of a public holiday for outbreak control on COVID-19 epidemic spread

summary:
  COVID-19 has posed major challenges for epidemic control because its routes of transmission are not fully understood, and prevention and screening, diagnosis, and treatment approaches still need to be developed and tested. The outbreak-control holiday did not immediately reduce the confirmed infections following the start of the holiday (as shown in Fig. 1(a) ) because the COVID-19 incubation period is relatively long and because the holiday started during the early stage of epidemic control.


id: cord-265025-xu8bc2eg
author: Yu, Pengbo
date: 2013-08-15
extension: .txt
mime: text/plain
words: 3319
sentence: 136
flesch: 45
cache: cache/cord-265025-xu8bc2eg.txt
txt: txt/cord-265025-xu8bc2eg.txt
title:
  Outbreak of acute respiratory disease caused by human adenovirus type 7 in a military training camp in Shaanxi, China

summary:
  Therefore, surveillance for HAdV genome types in China should be strengthened. In 1971, the US army started a vaccination program against HAdV types 4 and 7 (17, 19) that was ceased in 1996-1999 (20) .


id: cord-017634-zhmnfd1w
author: Straif-Bourgeois, Susanne
title: Infectious Disease Epidemiology
date: 2005
extension: .txt
mime: text/plain
words: 12380
sentence: 583
flesch: 43
cache: cache/cord-017634-zhmnfd1w.txt
txt: txt/cord-017634-zhmnfd1w.txt
summary:
  Outbreaks or epidemics are defined as the number of disease cases above what is normally expected in the area for a given time period. Even among those who have overt disease there are several disease stages that may not be included in a surveillance system: some have symptoms but do not seek medical attention some do get medical attention but do not get diagnosed or get misdiagnosed some get diagnosed but do not get reported Cases reported Cases diagnosed but not reported Cases who seek medical attention but were not diagnosed Cases who were symptomatic but did not seek medical attention Cases who were not symptomatic Infectious disease cases play different roles in the epidemiology of an infectious disease; some individuals are the indicators (most symptomatic), some are the reservoir of microorganisms (usually asymptomatic, not very sick), some are amplifiers (responsible for most of the transmission), some are the victims (those who develop severe long term complications).


id: cord-262623-lmf2h6oc
author: Light, R. Bruce
date: 2009-01-31
extension: .txt
mime: text/plain
words: 7820
sentence: 277
flesch: 39
cache: cache/cord-262623-lmf2h6oc.txt
txt: txt/cord-262623-lmf2h6oc.txt
title:
  Plagues in the ICU: A Brief History of Community-Acquired Epidemic and Endemic Transmissible Infections Leading to Intensive Care Admission

summary:
  Over the ensuing weeks several more cases of severe respiratory syndromes began to appear in the region, also undiagnosed. Such superantigens have since been implicated in a number of other disease syndromes, among them the streptococcal toxic shock syndrome (see below).


id: cord-309497-3v0asfa7
author: Asner, Sandra
date: 2012-02-21
extension: .txt
mime: text/plain
words: 1800
sentence: 83
flesch: 50
cache: cache/cord-309497-3v0asfa7.txt
txt: txt/cord-309497-3v0asfa7.txt
title:
  Respiratory viral infections in institutions from late stage of the first and second waves of pandemic influenza A (H1N1) 2009, Ontario, Canada

summary:
  Respiratory outbreaks are common in healthcare and community institutions such as long-term care facilities (LTCFs) and schools. was detected in the majority of respiratory outbreaks in LTCFs, where the vast majority of residents were elderly.


id: cord-026416-h0w5jsyd
author: Cheshmehzangi, Ali
title: Introduction: The City During Outbreak Events
date: 2020-06-09
extension: .txt
mime: text/plain
words: 6134
sentence: 222
flesch: 45
cache: cache/cord-026416-h0w5jsyd.txt
txt: txt/cord-026416-h0w5jsyd.txt
summary:
  It also proves how frequent we face outbreak events, and how important it is for us to study various methods of tackling the outbreak impacts on our cities and communities. Through many global examples of outbreak events, we verify that (urban) resilience should be strongly backed up by regional management and national strategies.


id: cord-307990-skrye40w
author: Hai, Le Thanh
title: Fatal Respiratory Infections Associated with Rhinovirus Outbreak, Vietnam
date: 2012-11-17
extension: .txt
mime: text/plain
words: 1693
sentence: 74
flesch: 45
cache: cache/cord-307990-skrye40w.txt
txt: txt/cord-307990-skrye40w.txt
summary:
  All hospitalized children and 26/43 children from outbreak orphanages tested positive for rhinovirus versus 9/40 control children (p = 0.0005). All hospitalized children and 26/43 children from outbreak orphanages tested positive for rhinovirus versus 9/40 control children (p = 0.0005).


id: cord-285760-y37ji92k
author: Connell, Anna R.
date: 2020-09-18
extension: .txt
mime: text/plain
words: 13114
sentence: 363
flesch: 26
cache: cache/cord-285760-y37ji92k.txt
txt: txt/cord-285760-y37ji92k.txt
title:
  Mumps Outbreaks in Vaccinated Populations—Is It Time to Re-assess the Clinical Efficacy of Vaccines?

summary:
  In contrast, other studies appear to contradict, these findings, showing no link between mumps protection and time elapsed following administration of mumps vaccine (138, 148, 149, 184, 185) . I. Incidence and severity of mumps in vaccinated and control groups Preparation of mumps vaccines and immunization of monkeys against experimental mumps infection European Centre for Disease Prevention and Control.


id: cord-018364-b06084r1
author: LaBrunda, Michelle
title: The Emerging Threat of Ebola
date: 2019-06-07
extension: .txt
mime: text/plain
words: 13506
sentence: 710
flesch: 55
cache: cache/cord-018364-b06084r1.txt
txt: txt/cord-018364-b06084r1.txt
summary:
  Ebola hemorrhagic fever in Kikwit, Democratic Republic of the Congo: clinical observations in 103 patients Interim guidance for healthcare workers providing care in West African countries affected by the Ebola outbreak: limiting heat burden while wearing personal protective equipment (PPE) Viral bioterrorism: learning the lesson of Ebola virus in West Africa CDC announces active post-arrival monitoring for travelers from impacted countries Enhanced Ebola screening to start at five U.S. airports and new tracking program for all people entering U.S. from Ebola-affected countries History of quarantine Enhanced Ebola screening to start at five U.S. airports and new tracking program for all people entering U.S. from Ebola-affected countries History of quarantine Protecting borders: the road to zero Severe meningoencephalitis in a case of Ebola virus disease: a case report Possible sexual transmission of Ebola virus -Liberia Persistence of Ebola virus in various body fluids during convalescence: evidence and implications for disease transmission and control The world's ten largest megacities Ebola virus-related encephalitis Survey of Ebola viruses in frugivorous and insectivorous bats in Guinea, Cameroon, and the Democratic Republic of the Congo Transmissibility and pathogenicity of Ebola virus: a systematic review and meta-analysis of household secondary attack rate and asymptomatic infection Ebola RNA persistence in semen of Ebola virus disease survivors -final report Demographia world urban areas: 14th annual edition Epidemiology and risk factors for Ebola virus disease in Sierra Leone -23 Ebola in Nigeria and Senegal: stable -for the moment (n.d.) Retrieved December Infection prevention and control measures for Ebola virus disease Transmission dynamics of Ebola virus disease and intervention effectiveness in Sierra Leone Use of viremia to evaluate the baseline case fatality ratio of Ebola virus disease and inform treatment studies: a retrospective cohort study Air trafic by the numbers Ebola haemorrhagic fever Variability in intrahousehold transmission of Ebola virus, and estimation of the household secondary attack rate The discovery of Bombali virus adds further support for bats as hosts of ebolaviruses Confronting the threat of bioterrorism: realities, challenges, and defensive strategies Cultural context of Ebola in northern Ugands Clinical presentation, biochemical, and haematological parameters and their association with outcome in patients with Ebola virus disease: an observational cohort study Infection Prevention and Control Recommendations for Hospitalized Patients Under Investigation (PUIs) for Ebola Virus Disease (EVD) in U Interim Guidance for Management of Survivors of Ebola Virus Disease Late Ebola virus relapse causing meningoencephalitis: a case report Disability among Ebola survivors and their close contacts in Sierra Leone: a retrospective case-controlled cohort study Monitoring of prognostic laboratory markers in Ebola virus disease Lethal experimential infection of rhesus monkeys with Ebola-Zaire (Mayinga) virus by the oral and conjunctival route of exposure Experimental inoculation of Egyptian Rousette bats (Rousettus aegyptiacus) with viruses of the ebolavirus and Marburgvirus genera An overview of Ebola virus disease Some airports have a new security routine: taking your temperature The worship of God in African traditional religion a Nigerian perspective The reemergence of Ebola hemorrhagic fever Democreatic Republic of the Congo, 1995, Commission de Lutte Contre les Epidemies a Kikwit Ebola virus disease in health care workers -Sierra Leone Some airports have a new security routine: taking your temperature.


id: cord-278913-u6vihq3u
author: Allam, Zaheer
title: The Rise of Machine Intelligence in the COVID-19 Pandemic and Its Impact on Health Policy
date: 2020-07-24
extension: .txt
mime: text/plain
words: 5401
sentence: 168
flesch: 44
cache: cache/cord-278913-u6vihq3u.txt
txt: txt/cord-278913-u6vihq3u.txt
summary:
  It cemented its authority in the use of modern computing technologies in 2014, where it developed risk assessment models that allowed it to predict the spread of Ebola virus outbreak that struck three West Africa countries (Allen, 2016 ). Such technologies, as noted earlier, are what allowed BlueDot and Metabiota to obtain the correct predictions they made about the outbreak and spread of COVID-19 to different regions.


id: cord-286565-bmcsyfz9
author: Akdeniz, Gulsum
date: 2020-07-15
extension: .txt
mime: text/plain
words: 4223
sentence: 189
flesch: 44
cache: cache/cord-286565-bmcsyfz9.txt
txt: txt/cord-286565-bmcsyfz9.txt
title:
  A Survey of Attitudes, Anxiety Status, and Protective Behaviors of the University Students During the COVID-19 Outbreak in Turkey

summary:
  A Study on Immediate Mental Health Status and Psychoneuroimmunity Prevention Measures of Chinese Workforce The Genetic Links to Anxiety and Depression (GLAD) Study: Online recruitment into the largest recontactable study of depression and anxiety Anxiety sensitivity and emotion regulation as mechanisms of successful CBT outcome for anxietyrelated disorders in a naturalistic treatment setting A Longitudinal Study on the Mental Health of General Population during the COVID-19 Epidemic in China Public responses to the novel 2019 coronavirus (2019-nCoV) in Japan: mental health consequences and target populations The mental health of medical workers in Wuhan, China dealing with the 2019 novel coronavirus Learning to use statistical tests in psychology The use of psychological testing for treatment planning and outcomes assessment: General considerations The 2014 Ebola Outbreak and Mental Health: Current Status and Recommended Response An inventory for measuring clinical anxiety: Psychometric properties Turkish version of the Beck Anxiety Inventory: Psychometric properties Using Multivariate Statistics Isolation, quarantine, social distancing and community containment: pivotal role for old-style public health measures in the novel coronavirus (2019-nCoV) outbreak Google searches for the keywords of wash hands predict the speed of national spread of COVID-19 outbreak among 21 countries Epidemiology, causes, clinical manifestation and diagnosis, prevention and control of coronavirus disease (COVID-19) during the early outbreak period: A scoping review Social reaction toward the 2019 novel coronavirus (COVID-19) The immediate psychological and occupational impact of the 2003 SARS outbreak in a teaching hospital Fear and stigma: the epidemic within the SARS outbreak An outbreak of fear rumours and stigma: Psychosocial support for the Ebola virus disease outbreak in West Africa The Fear of COVID-19 Scale: Development and Initial Validation Television viewing, computer game playing, and Internet use and self-reported time to bed and time out of bed in secondary-school children Internet overuse and excessive daytime sleepiness in adolescents Mobile phone use and stress, sleep disturbances, and symptoms of depression among young adults-a prospective cohort study Sleepy teens: social media use in adolescence is associated with poor sleep quality, anxiety, depression, and low self-esteem The association between social media use and sleep disturbance among young adults A four-wave, cross-lagged model of problematic internet use and mental health among Chinese college students: Disaggregation of within-person and between-person effects Reducing Nursing Student Anxiety in the Clinical Setting: An Integrative Review Type 1 interferons as a potential treatment against COVID-19 TreaTment for emerging viruses: Convalescent plasma and COVID-19 The SARS-CoV-2 vaccine pipeline: an overview Early Assessment of Anxiety and Behavioral Response to Novel Swine-Origin Influenza A(H1N1) Sex-specific clinical characteristics and prognosis of coronavirus disease-19 infection in Wuhan, China: A retrospective study of 168 severe patients Gender Differences in Patients With COVID-19: Focus on Severity and Mortality Characterize health and economic vulnerabilities of workers to control the emergence of COVID-19 in an industrial zone in Vietnam Mental Health Strategies to Combat the Psychological Impact of COVID-19 Beyond Paranoia and Panic As a matter of fact, a study by Filder Smith and Do Freedman also stated that social distances would reduce transmission, as such outbreak diseases require a certain intimacy of people (15) .


id: cord-293221-gf9wy4a9
author: Idowu, Abiodun Benjamin
date: 2020-08-31
extension: .txt
mime: text/plain
words: 4437
sentence: 222
flesch: 56
cache: cache/cord-293221-gf9wy4a9.txt
txt: txt/cord-293221-gf9wy4a9.txt
title:
  Ebola virus disease in the eyes of a rural, agrarian community in Western Nigeria: a mixed method study

summary:
  Results of a qualitative study A time for fear: local, national and international responses to a large EVD outbreak in Uganda Cultural contexts of Ebola in northern Uganda Modelling the role of public health education in Ebola virus disease outbreaks in Sudan The Liberia Ministry of Health. In 2014; the deadliest, most widespread (affected ten countries), EVD outbreak that lasted approximately 2 years occurred making it a global emergency


id: cord-313693-qmkrn7pr
author: Wong, Bonnie C. K.
title: Possible Role of Aerosol Transmission in a Hospital Outbreak of Influenza
date: 2010-11-15
extension: .txt
mime: text/plain
words: 4204
sentence: 184
flesch: 42
cache: cache/cord-313693-qmkrn7pr.txt
txt: txt/cord-313693-qmkrn7pr.txt
summary:
  Pandemic (H1N1) Infection prevention and control in health care for confirmed or suspected cases of pandemic (H1N1) 2009 and influenza-like illnesses Interim guidance on infection control measures for 2009 H1N1 influenza in healthcare settings, including protection of healthcare personnel Physical interventions to interrupt or reduce the spread of respiratory viruses: systematic review Surgical mask vs N95 respirator Aerosol Transmission of Influenza • CID 2010:51 (15 November) • 1183 for preventing influenza among health care workers: a randomized trial Novel H1N1 influenza and respiratory protection for health care workers Transmission of influenza A in human beings Evidence of airborne transmission of the severe acute respiratory syndrome virus Temporal-spatial analysis of severe acute respiratory syndrome among hospital inpatients Detection of airborne severe acute respiratory syndrome (SARS) coronavirus and environmental contamination in SARS outbreak units Role of ventilation in airborne transmission of infectious agents in the built environment-a multidisciplinary systematic review Review of aerosol transmission of influenza A virus Aerosol transmission of influenza A virus: a review of new studies Outcomes of adults hospitalized with severe influenza Factors associated with early hospital discharge of adult influenza patients A major outbreak of severe acute respiratory syndrome in Hong Kong Seasonality of influenza A(H3N2) virus: a Hong Kong perspective Lack of cross-immune reactivity against influenza H5N1 from seasonal influenza vaccine in humans Fluent 6.2 user's guide Removal of exhaled particles by ventilation and deposition in a multibed airborne infection isolation room How far droplets can move in indoor environments-revisiting Wells evaporation-falling curve of droplets Exhaled air dispersion distances during noninvasive ventilation via different respironics face masks Noninvasive positive-pressure ventilation: an experimental model to assess air and particle dispersion Exhaled air dispersion during oxygen delivery via a simple oxygen mask The guinea pig as a transmission model for human influenza viruses Transmission of influenza virus via aerosols and fomites in the guinea pig model Transmission and pathogenesis of swine-origin 2009 A(H1N1) influenza viruses in ferrets and mice Measurement of airborne influenza virus in a hospital emergency department Influenza virus in human exhaled breath: an observational study Investigation of a nosocomial outbreak of severe acute respiratory syndrome (SARS) in Toronto, Canada Possible SARS coronavirus transmission during cardiopulmonary resuscitation Why did outbreaks of severe acute respiratory syndrome occur in some hospital wards but not in others? Cross-sectional and longitudinal factors predicting influenza vaccination in Hong Kong Chinese elderly aged 65 and above Willingness of Hong Kong healthcare workers to accept pre-pandemic influenza vaccination at different WHO alert levels: two questionnaire surveys Influenza virus transmission is dependent on relative humidity and temperature Factors involved in the aerosol transmission of infection and control of ventilation in healthcare premises Under natural conditions, influenza virus is transmitted predominantly via droplets and direct contact [13] .


id: cord-298941-xf2ukinp
author: Al-Abdallat, Mohammad Mousa
date: 2014-05-14
extension: .txt
mime: text/plain
words: 4829
sentence: 198
flesch: 38
cache: cache/cord-298941-xf2ukinp.txt
txt: txt/cord-298941-xf2ukinp.txt
title:
  Hospital-Associated Outbreak of Middle East Respiratory Syndrome Coronavirus: A Serologic, Epidemiologic, and Clinical Description

summary:
  Sera from the 2 fatal cases (designated outbreak subjects 01 and 12) having positive rRT-PCR tests were also tested by the 3 described serology tests. The recombinant btHKU5.2 nucleocapsid proteinbased ELISA was developed by the CDC to detect the presence of antibodies that cross-react with the HKU5.2 N protein in serum samples from possible MERS cases.


id: cord-019057-3j2fl358
author: Afolabi, Michael Olusegun
title: Pandemic Influenza: A Comparative Ethical Approach
date: 2018-08-28
extension: .txt
mime: text/plain
words: 13976
sentence: 675
flesch: 46
cache: cache/cord-019057-3j2fl358.txt
txt: txt/cord-019057-3j2fl358.txt
summary:
  In a manner of speaking, it seems that PHDs such as pandemic influenza outbreaks have evolved to become recurring features of the human experience. The importance of this last remark will become clearer against the backdrop of the social and global features of pandemic influenza outbreaks, a. theme addressed in the next section of this chapter.


id: cord-332658-548402bb
author: Brownstein, John S
date: 2008-07-08
extension: .txt
mime: text/plain
words: 3109
sentence: 121
flesch: 33
cache: cache/cord-332658-548402bb.txt
txt: txt/cord-332658-548402bb.txt
title:
  Surveillance Sans Frontières: Internet-Based Emerging Infectious Disease Intelligence and the HealthMap Project

summary:
  The system characterizes disease outbreak reports by means of a series of text mining algorithms. However, the myriad diverse sources of infectious disease information across the Web are not structured or organized; public health officials, nongovernmental organizations, and concerned citizens must routinely search and synthesize a continually growing number of disparate sources in order to use this information.


id: cord-104128-0gyk9cwx
author: Morand, Serge
title: The accelerated infectious disease risk in the Anthropocene: more outbreaks and wider global spread
date: 2020-04-20
extension: .txt
mime: text/plain
words: 7039
sentence: 197
flesch: 31
cache: cache/cord-104128-0gyk9cwx.txt
txt: txt/cord-104128-0gyk9cwx.txt
summary:
  Here, we report on another risk: the accelerated infectious disease risk associated with the number and geographic spread of human infectious disease outbreaks. Using the most complete, reliable, and up-to-date database on human infectious disease outbreaks (GIDEON), we show that the number of disease outbreaks, the number of diseases involved in these outbreaks, and the number of countries affected have increased during the entire Anthropocene.


id: cord-295761-ze2hnddp
author: Georgiou, Harris V
title: COVID-19 outbreak in Greece has passed its rising inflection point and stepping into its peak
date: 2020-04-20
extension: .txt
mime: text/plain
words: 10300
sentence: 338
flesch: 46
cache: cache/cord-295761-ze2hnddp.txt
txt: txt/cord-295761-ze2hnddp.txt
summary:
  These are usually based on Sequential Monte Carlo (3, 4) , Markov Chain Monte Carlo (MCMC) or Markov Chain quasi-Monte Carlo (MCQMC) (5-7), Hidden Markov Models (HMM) (8) (9) (10) (11) , etc, each posing other assumptions, advantages and drawbacks -most commonly the availability or not of a significant amount of epidemic data upon which they are to be trained. This is perhaps the main advantage over other approaches that require a statistically significant pool of epidemic data as ground truth from the beginning, e.g., in order to estimate posterior probabilities, etc.


id: cord-286029-rafcdzhm
author: Bogaards, Johannes Antonie
title: The potential of targeted antibody prophylaxis in SARS outbreak control: A mathematic analysis()
date: 2006-05-05
extension: .txt
mime: text/plain
words: 5580
sentence: 226
flesch: 40
cache: cache/cord-286029-rafcdzhm.txt
txt: txt/cord-286029-rafcdzhm.txt
summary:
  We therefore investigated the robustness of control through admission interval reduction and patient isolation procedures in the containment of SARS transmission over a range of basic reproduction numbers. Reduction of the admission interval is insufficient to contain SARS outbreaks with R 0 ¼ 3 at c ¼ 0:20. key: cord-286029-rafcdzhm authors: Bogaards, Johannes Antonie; Putter, Hein; Jan Weverling, Gerrit; ter Meulen, Jan; Goudsmit, Jaap title: The potential of targeted antibody prophylaxis in SARS outbreak control: A mathematic analysis() date: 2006-05-05 journal: Travel Med Infect Dis DOI: 10.1016/j.tmaid.2006.01.007 sha: doc_id: 286029 cord_uid: rafcdzhm BACKGROUND: Severe acute respiratory syndrome (SARS) coronavirus-like viruses continue to circulate in animal reservoirs.


id: cord-312319-daiikgth
author: van Velsen, Lex
date: 2014-01-31
extension: .txt
mime: text/plain
words: 4971
sentence: 224
flesch: 46
cache: cache/cord-312319-daiikgth.txt
txt: txt/cord-312319-daiikgth.txt
title:
  Public knowledge and preventive behavior during a large-scale Salmonella outbreak: results from an online survey in the Netherlands

summary:
  We included the following independent variables in the initial models: the demographics age, having children, education, income, and sex (based on [18, 19] ), as well as the factors perceived severity of a Salmonella infection, perceived severity of the Salmonella outbreak, knowledge about Salmonella infections, interest in health information, and perceived health (based on [18] ), as well as the application of measures to prevent a Salmonella infection, and increased carefulness with preparing food (following [25] ). These scores were .85 for perceived severity of Salmonella, .84 for perceived severity of the 2012 outbreak, .77 for carefulness with salmon preparation during the outbreak, .89 for carefulness with general food preparation during the outbreak, .80 for interest in health information, and .76 for perceived health.


id: cord-321537-ceehbhcb
author: Eksin, C.
title: Reacting to outbreaks at neighboring localities
date: 2020-04-29
extension: .txt
mime: text/plain
words: 3535
sentence: 166
flesch: 49
cache: cache/cord-321537-ceehbhcb.txt
txt: txt/cord-321537-ceehbhcb.txt
summary:
  https://doi.org/10.1101/2020.04.24.20078808 doi: medRxiv preprint whether the level of preparedness, and thus, reduction in outbreak size at neighboring localities can make up for the increased outbreak size at the origin, we looked at the total outbreak size as a function of strength of response to local disease prevalence. Early detection of disease outbreaks at their location of origin provide a chance for local containment and time to prepare in other locations.


id: cord-351017-yntcwq9t
author: Li, Xuelian
title: COVID-19, insurer board utility, and capital regulation
date: 2020-06-18
extension: .txt
mime: text/plain
words: 2243
sentence: 103
flesch: 47
cache: cache/cord-351017-yntcwq9t.txt
txt: txt/cord-351017-yntcwq9t.txt
summary:
  key: cord-351017-yntcwq9t authors: Li, Xuelian; Lin, Panpan; Lin, Jyh-Horng title: COVID-19, insurer board utility, and capital regulation date: 2020-06-18 journal: The result thereby contributes to insurance stability since insurer capital serves directly for policyholder protection (Insurance Europe, 2014).


id: cord-300301-7amiljnm
author: Clements, Bruce W.
title: Emerging and Reemerging Infectious Disease Threats
date: 2016-03-04
extension: .txt
mime: text/plain
words: 6536
sentence: 307
flesch: 45
cache: cache/cord-300301-7amiljnm.txt
txt: txt/cord-300301-7amiljnm.txt
summary:
  Institute of Medicine Human ebola outbreak resulting from direct exposure to fruit bats in Luebo, Democratic Republic of Congo Monitoring EU emerging infectious disease risk due to climate change Multistate point-prevalence survey of health careassociated infections Bats, emerging virus infections and the rabies paradigm Measles Cases Linked to Disneyland Rise, and Debate Over Vaccinations Intensifies Tracking the roots of a killer Possible role of an animal vector in the SARS outbreak at Amoy Gardens Climate, environmental and socio-economic change: weighing up the balance in vector-borne disease transmission Risk management of febrile respiratory illness in emergency departments West Nile virus in the United States-a historical perspective Fungal infections associated with contaminated methylprednisolone injections The Mosquito Solution Risk factors for human disease emergence. • Discuss the impact of emerging infectious diseases on public health preparedness.


id: cord-313616-81u4nidw
author: Davis, G. S.
date: 2014-04-30
extension: .txt
mime: text/plain
words: 7437
sentence: 224
flesch: 18
cache: cache/cord-313616-81u4nidw.txt
txt: txt/cord-313616-81u4nidw.txt
title:
  Spatial and temporal analyses to investigate infectious disease transmission within healthcare settings

summary:
  in an Italian general intensive care unit An outbreak of mupirocin-resistant Staphylococcus aureus on a dermatology ward associated with an environmental reservoir Nosocomial outbreak of gastroenteritis due to Salmonella senftenberg Use of interrepeat PCR fingerprinting to investigate an Acinetobacter baumannii outbreak in an intensive care unit Epidemiology and clinical characteristics of parainfluenza virus 3 outbreak in a haematooncology unit Low frequency of endemic patient-to-patient transmission of antibioticresistant Gram-negative bacilli in a pediatric intensive care unit Origin and transmission of methicillin-resistant Staphylococcus aureus in an endemic situation: differences between geriatric and intensive-care patients The role of interventional molecular epidemiology in controlling clonal clusters of multidrug resistant Pseudomonas aeruginosa in critically ill cancer patients Nosocomial transmission in simultaneous outbreaks of hepatitis C and B virus infections in a hemodialysis center Investigation and control of an outbreak of imipenem-resistant Acinetobacter baumannii infection in a pediatric intensive care unit Nosocomial acquisition of Clostridium difficile infection A cluster of nosocomial Klebsiella oxytoca bloodstream infections in a university hospital Nosocomial outbreak of staphylococcal scalded skin syndrome in neonates: epidemiological investigation and control Outbreak of nosocomial urinary tract infections due to Pseudomonas aeruginosa in a paediatric surgical unit associated with tap-water contamination Invasive aspergillosis e clusters and sources Nosocomial legionellosis associated with aspiration of nasogastric feedings diluted in tap water Outbreak of pseudobacteremia due to multidrug-susceptible Enterococcus faecium Frequency and diversity of molecular epidemiology of methicillin-resistant Staphylococcus aureus (MRSA) isolates from patients of a South West German teaching hospital A nosocomial outbreak of Candida parapsilosis in southern Sweden verified by genotyping Hospital transmission of multidrug-resistant Mycobacterium tuberculosis in Rosario Molecular epidemiology of a hepatitis C virus outbreak in a haemodialysis unit An outbreak of group A streptococcal infection among health care workers Spread of methicillin-resistant Staphylococcus aureus in a hospital after exposure to a health care worker with chronic sinusitis Molecular epidemiology of endemic Clostridium difficile infection Norovirus in the hospital setting: virus introduction and spread within the hospital environment An outbreak of methicillinresistant Staphylococcus aureus infection in patients of a pediatric intensive care unit and high carriage rate among health care workers An investigation of the spread of gentamicin resistance in a district general hospital Epidemiology and control of an outbreak of vancomycin-resistant enterococci in the intensive care units Outbreak of communityacquired methicillin-resistant Staphylococcus aureus skin infections among health care workers in a cancer center Outbreak of extendedspectrum beta-lactamase-producing Klebsiella oxytoca infections associated with contaminated handwashing sinks Successful control of a hospital-wide vancomycin-resistant Enterococcus faecium outbreak in France Cluster of cases of invasive aspergillosis in a transplant intensive care unit: evidence of person-to-person airborne transmission Tightly clustered outbreak of group A streptococcal disease at a long-term care facility A hospital epidemic of vancomycin-resistant enterococcus: risk factors and control An outbreak of acute gastroenteritis in a geriatric long-term-care facility: combined application of epidemiological and molecular diagnostic methods A bronchofiberoscopy-associated outbreak of multidrug-resistant Acinetobacter baumannii in an intensive care unit in Beijing, China Nosocomial infection by gentamicin-resistant Streptococcus faecalis: an epidemiologic study Changing pattern of antibiotic resistance in methicillin-resistant Staphylococcus aureus from German hospitals Modelling the impact of antibiotic use and infection control practices on the incidence of hospital-acquired methicillin-resistant Staphylococcus aureus: a time-series analysis Quasiexperimental study of the effects of antibiotic use, gastric acid-suppressive agents, and infection control practices on the incidence of Clostridium difficile-associated diarrhea in hospitalized patients Temporal effects of infection control practices and the use of antibiotics on the incidence of MRSA Temporal effects of antibiotic use and hand rub consumption on the incidence of MRSA and Clostridium difficile A time-series analysis of Clostridium difficile and its seasonal association with influenza Detecting related cases of bloodstream infections using time-interval distribution modelling Analysis of hospital infection surveillance data Others examined annual trends, were case studies or review papers, or focused on non-healthcare settings.


id: cord-298678-hjxph9jm
author: Petrović, T.
title: Viral Contamination of Food
date: 2016-02-05
extension: .txt
mime: text/plain
words: 10130
sentence: 348
flesch: 43
cache: cache/cord-298678-hjxph9jm.txt
txt: txt/cord-298678-hjxph9jm.txt
summary:
  A lack of appropriate detection methods for confirmation of viruses as the etiological agent in food is also the reason for underreporting of foodborne virus outbreaks (Baert et al., 2009) . The existing knowledge gaps and the major future expectations in the detection and surveillance of foodborne viruses are mentioned. , and over 4700 persons in Japan contracted foodborne gastroenteritis due to AstV (Oishi et al., 1994) .


id: cord-351834-9pclxek0
author: Cohen, Liza Miriam
title: A descriptive study of acute outbreaks of respiratory disease in Norwegian fattening pig herds
date: 2020-06-24
extension: .txt
mime: text/plain
words: 6847
sentence: 334
flesch: 45
cache: cache/cord-351834-9pclxek0.txt
txt: txt/cord-351834-9pclxek0.txt
summary:
  Regulation on swine and poultry production Annual statistical report The successful eradication of Mycoplasma hyopneumoniae from Norwegian pig herds -10 years later. The main objective of this study was to investigate clinical outbreaks of acute respiratory disease in Norwegian fattening pig herds, using a group of non-outbreak herds to compare diagnostic procedures.


id: cord-354345-p4ld0tun
author: Bonadonna, Lucia
title: A Review and Update on Waterborne Viral Diseases Associated with Swimming Pools
date: 2019-01-09
extension: .txt
mime: text/plain
words: 4796
sentence: 248
flesch: 47
cache: cache/cord-354345-p4ld0tun.txt
txt: txt/cord-354345-p4ld0tun.txt
summary:
  A community outbreak of echovirus infection associated with an outdoor swimming pool An outbreak of aseptic meningitis due to Echovirus 30 associated with attending school and swimming in pools Investigation into a school enterovirus outbreak using PCR detection and serotype identification based on the 5' non-coding region An outbreak of viral meningitis associated with a public swimming pond Surveillance for waterborne-disease outbreaks associated with recreational water-United States Hollos, I. An outbreak of hepatitis A due to a thermal spa An outbreak of hepatitis A associated with swimming in a public pool An outbreak of hepatitis A associated with a spa pool An outbreak of Norwalk gastroenteritis associated with swimming in a pool and secondary person-to-person transmission Wading pool water contaminated with both noroviruses and astroviruses as the source of a gastroenteritis outbreak Outbreak of norovirus illness associated with a swimming pool Surveillance for waterborne disease and outbreaks associated with recreational water use and other aquatic facility-associated health events-United States Enteric Viruses in Wading Pools Enteroviral Syndromes in Toronto Relationship of viruses and indicator bacteria in water and wastewater of Israel Occurrence of enteroviruses in community swimming pools Enterovirus contamination of swimming pool water; correlation with bacteriological indicators Analysis of enterovirus and adenovirus presence in swimming pools in Cyprus from First detection of papillomaviruses and polyomaviruses in swimming pool waters: Unrecognized recreational water-related pathogens? Detection of oncogenic viruses in water environments by a Luminex-based multiplex platform for high throughput screening of infectious agents Author Contributions: L.B. and G.L.R. conceived and wrote the paper, and approved the submitted version. No acceptable microbial risk has thus far been established for swimming pool water.


id: cord-345727-bcxkycjh
author: Karimata, Yosuke
date: 2018-09-15
extension: .txt
mime: text/plain
words: 3381
sentence: 168
flesch: 40
cache: cache/cord-345727-bcxkycjh.txt
txt: txt/cord-345727-bcxkycjh.txt
title:
  Clinical Features of Human Metapneumovirus Pneumonia in Non-Immunocompromised Patients: An Investigation of Three Long-Term Care Facility Outbreaks

summary:
  Patients with hMPV infection were identified during 3 independent LTCF outbreaks in Okinawa, a subtropical region of Japan. During the outbreaks, 105 patients with hMPV infections (30 confirmed cases and 75 probable cases) were identified.


id: cord-353596-8iqjugcx
author: Bédubourg, Gabriel
date: 2017-07-17
extension: .txt
mime: text/plain
words: 5605
sentence: 255
flesch: 49
cache: cache/cord-353596-8iqjugcx.txt
txt: txt/cord-353596-8iqjugcx.txt
title:
  Evaluation and comparison of statistical methods for early temporal detection of outbreaks: A simulation-based study

summary:
  MMWR Morbidity and mortality weekly report Statistical Challenges Facing Early Outbreak Detection in Biosurveillance Statistical methods for the prospective detection of infectious disease outbreaks: a review Automated biosurveillance data from England and Wales A Statistical Algorithm for the Early Detection of Outbreaks of Infectious Disease An evaluation and comparison of three commonly used statistical models for automatic detection of outbreaks in epidemiological data of communicable diseases Assessing surveillance using sensitivity, specificity and timeliness Comparing aberration detection methods with simulated data Comparing syndromic surveillance detection methods: EARS' versus a CUSUM-based methodology Comparison of various statistical methods for detecting disease outbreaks Statistical algorithms for early detection of the annual influenza peak season in Hong Kong using sentinel surveillance data A simulation model for assessing aberration detection methods used in public health surveillance for systems with limited baselines Evaluation of a method for detecting aberrations in public health surveillance data Comparing early outbreak detection algorithms based on their optimized parameter values A simulation study comparing aberration detection algorithms for syndromic surveillance. One advantage of a simulation study for outbreak detection methods benchmarking is the a priori knowledge of the occurrence of outbreaks, which enables the developpment of a real gold standard.


id: cord-319647-c4qnwfm9
author: Le Guyader, Françoise S
title: Transmission of viruses through shellfish: when specific ligands come into play
date: 2011-11-25
extension: .txt
mime: text/plain
words: 4048
sentence: 155
flesch: 43
cache: cache/cord-319647-c4qnwfm9.txt
txt: txt/cord-319647-c4qnwfm9.txt
summary:
  Over the past 10 years, NoV sequence analyses of outbreak strains collected from around the world show that GII.4 viruses have accounted for 70% of all human cases [20 ] . One characteristic of shellfish-related outbreaks is their frequent association with multiple virus strains observed both in infected patients and in the involved shellfish.


id: cord-289305-mfjyjjer
author: Lee, Min Hye
date: 2020-03-10
extension: .txt
mime: text/plain
words: 7552
sentence: 391
flesch: 46
cache: cache/cord-289305-mfjyjjer.txt
txt: txt/cord-289305-mfjyjjer.txt
title:
  A systematic review on the causes of the transmission and control measures of outbreaks in long-term care facilities: Back to basics of infection control

summary:
  Three of them were long-lasting outbreaks with multiple clusters for more than 6 months, which suggested that an accurate identification of how pathogens spread was a fundamental step in outbreak control. Forming a local support network between acute hospitals and LTCFs at a regional level would be a potential way to close the gaps and to enhance outbreak control practices in LTCFs without adequate capacity [74] .


id: cord-317450-tp2ckb6r
author: Robillard, R.
date: 2020-06-30
extension: .txt
mime: text/plain
words: 4905
sentence: 200
flesch: 44
cache: cache/cord-317450-tp2ckb6r.txt
txt: txt/cord-317450-tp2ckb6r.txt
title:
  Social, Financial and Psychological Stress during an Emerging Pandemic: Observations from a Population Web-Based Survey in the acute phase of the COVID-19 pandemic

summary:
  Factors hypothesized a priori to be associated with stress changes were: pre-outbreak stress level, time elapsed since the pandemic declaration by the WHO, age, sex, education level, total family income, employment status, working with the general public, political views, having underage children, having travelled abroad in the past 60 days, index reflective of the number and severity of potential COVID-19 symptoms, the Dimensional Obsessive-Compulsive Scale (DOCS) contamination subscale, Big5 personality subscales, Brief Resilient Coping Scale (BRCS), having a mental disorder, alcohol and drugs use, having a physical condition at risk for COVID-19, sleep duration, quality of family relationships, and amount of time spent outdoors, interacting with other people, following the news on COVID-19, and engaging in physical and artistic activities. Perceived threats and concerns, occupational, financial and social impacts, as well as psychological stress changes relative to retrospective pre-outbreak estimates are reported.


id: cord-331060-b3z1zb4t
author: Cruickshank, Marilyn
title: COVID‐19: Lessons to be learnt from a once‐in‐a‐century global pandemic
date: 2020-06-04
extension: .txt
mime: text/plain
words: 2293
sentence: 88
flesch: 49
cache: cache/cord-331060-b3z1zb4t.txt
txt: txt/cord-331060-b3z1zb4t.txt
summary:
  A better understanding of, and resolution to, the barriers to recognition of nurse leaders in events like these, in particular those in infection prevention and control, is also required given that outbreaks of infectious diseases are here to stay and the fundamental role that nurses play in outbreak responses now and into the future. The outbreaks of SARS-CoV-1, MERS-CoV, Ebola and H1N1, and the lessons learned from each have been noteworthy: importance of good hygiene (hands and surroundings), testing when possible, isolation of those infected, personal protection equipment for health care workers and others involved in the care of the infected, expurgated search for treatments, and vaccines.


id: cord-355713-zupocnuf
author: Li, Junxiong
title: Changing Grocery Shopping Behaviours Among Chinese Consumers At The Outset Of The COVID‐19 Outbreak
date: 2020-06-12
extension: .txt
mime: text/plain
words: 4059
sentence: 129
flesch: 43
cache: cache/cord-355713-zupocnuf.txt
txt: txt/cord-355713-zupocnuf.txt
summary:
  For this purpose, the theory of planned behaviour first posited by Ajzen (1991) is adopted to explore planned changes to consumer food shopping behaviours at the early stages of the COVID-19 outbreak in China. In contrast, there was a surge in online shopping, with the percentage of consumers buying food and groceries online increasing from 11 per cent before the outbreak to 38 per cent, with online food shopping becoming the most popular channel during the outbreak.


id: cord-291382-vo9bemg1
author: Ryan, Jeffrey R.
title: Case Studies
date: 2016-03-25
extension: .txt
mime: text/plain
words: 7066
sentence: 331
flesch: 53
cache: cache/cord-291382-vo9bemg1.txt
txt: txt/cord-291382-vo9bemg1.txt
summary:
  In addition, each case study presented herein shows how confounding these outbreaks can be to public health officials and how fear, panic, and social disruption may ensue. The unhygienic conditions and poor working conditions within Surat were commonly identified by public health officials as the causes for regular epidemic outbreaks within the city of malaria, gastroenteritis, pneumonia, and diarrhea.


id: cord-320454-dhfl92et
author: Srivastava, S.
title: Healthcare-associated infections in neonatal units: lessons from contrasting worlds
date: 2007-03-12
extension: .txt
mime: text/plain
words: 7392
sentence: 348
flesch: 36
cache: cache/cord-320454-dhfl92et.txt
txt: txt/cord-320454-dhfl92et.txt
summary:
  It is interesting to note that the CDC includes infections acquired from the maternal genital tract in their surveillance of nosocomial neonatal infection. For this reason, neonatal infections are often classified as early onset (usually 0e7 days after birth) and late onset (>7 days after birth).


id: cord-324230-nu0pn2q8
author: Ardabili, S. F.
title: COVID-19 Outbreak Prediction with Machine Learning
date: 2020-04-22
extension: .txt
mime: text/plain
words: 7339
sentence: 357
flesch: 49
cache: cache/cord-324230-nu0pn2q8.txt
txt: txt/cord-324230-nu0pn2q8.txt
summary:
  Access to accurate outbreak prediction models is essential to obtain insights into the likely spread and consequences of infectious diseases. Governments and other legislative bodies rely on insights from prediction models to suggest new policies and to assess the effectiveness of the enforced policies [1] .


id: cord-321098-j3glby40
author: Bodrud-Doza, Md.
date: 2020-06-26
extension: .txt
mime: text/plain
words: 8966
sentence: 328
flesch: 44
cache: cache/cord-321098-j3glby40.txt
txt: txt/cord-321098-j3glby40.txt
title:
  Psychosocial and Socio-Economic Crisis in Bangladesh Due to COVID-19 Pandemic: A Perception-Based Assessment

summary:
  However, a surge of COVID-19 outbreaks in all inhabitable continents, with 84,187 deaths alone in the USA, indicates that the infection had passed the tipping point (1, 6) . The DGHS, on the other hand, is the responsible body for the coordination of testing and sample collections of COVID-19 patients (10) .


id: cord-298372-4pw1y404
author: Koch, Lionel
title: Natural outbreaks and bioterrorism: How to deal with the two sides of the same coin?
date: 2020-08-18
extension: .txt
mime: text/plain
words: 6210
sentence: 211
flesch: 34
cache: cache/cord-298372-4pw1y404.txt
txt: txt/cord-298372-4pw1y404.txt
summary:
  Over the past ten years, epidemiological and mathematical modelling data were essential for risk characterisation and management during infectious disease outbreaks [92] but ironically, the rising power of AI systems will not erase the role of human experts [93] . The effect of control strategies to reduce social mixing on outcomes of the COVID-19 epidemic in Wuhan, China: a modelling study To what extent does evidence support decision making during infectious disease outbreaks?


id: cord-354763-odzrco6q
author: Drake, John M.
date: 2006-12-20
extension: .txt
mime: text/plain
words: 5746
sentence: 230
flesch: 41
cache: cache/cord-354763-odzrco6q.txt
txt: txt/cord-354763-odzrco6q.txt
title:
  Societal Learning in Epidemics: Intervention Effectiveness during the 2003 SARS Outbreak in Singapore

summary:
  Societal learning models were fit to the reciprocal of the mean of observed lags between onset of symptoms and removal c An alternative is to compare the observed outbreak size with the theoretical distribution of outbreak sizes for outbreaks initialized at I 0


id: cord-336845-7ofgekoj
author: Donthu, Naveen
title: Effects of COVID-19 on Business and Research
date: 2020-06-09
extension: .txt
mime: text/plain
words: 5229
sentence: 237
flesch: 50
cache: cache/cord-336845-7ofgekoj.txt
txt: txt/cord-336845-7ofgekoj.txt
summary:
  There has been a long history of fear of pandemic outbreaks. We should also make an effort to learn from the consequences of pandemic outbreaks to prepare our societies for if-and, more likely, when-this happens again.


id: cord-322541-yzum868k
author: Moon, Suerie
date: 2015-11-23
extension: .txt
mime: text/plain
words: 11745
sentence: 467
flesch: 36
cache: cache/cord-322541-yzum868k.txt
txt: txt/cord-322541-yzum868k.txt
title:
  Will Ebola change the game? Ten essential reforms before the next pandemic. The report of the Harvard-LSHTM Independent Panel on the Global Response to Ebola

summary:
  That month, both Guinea and Liberia confi rmed Ebola outbreaks to WHO. Fourth, fi eld staff often reinvented strategies for community mobilisation and contact tracing because relevant lessons from previous Ebola outbreaks in Uganda and the Democratic Republic of Congo were not eff ectively transferred.


id: cord-340194-ibli36rq
author: To, Kelvin K.W.
title: Ebola virus disease: a highly fatal infectious disease reemerging in West Africa
date: 2014-11-29
extension: .txt
mime: text/plain
words: 8875
sentence: 409
flesch: 47
cache: cache/cord-340194-ibli36rq.txt
txt: txt/cord-340194-ibli36rq.txt
summary:
  Are bats spreading Ebola across sub-Saharan Africa? Transmission of Ebola hemorrhagic fever: a study of risk factors in family members Assessment of the risk of Ebola virus transmission from bodily fluids and fomites Persistence and genetic stability of Ebola virus during the outbreak in Kikwit, Democratic Republic of the Congo The survival of filoviruses in liquids, on solid substrates and in a dynamic aerosol Ebola virus: from discovery to vaccine A case of Ebola virus infection Russian scientist dies after Ebola lab accident Viral haemorrhagic fevers in healthcare settings Discovery of swine as a host for the Reston ebolavirus Ebola virus antibody prevalence in dogs and human risk Multiple Ebola virus transmission events and rapid decline of central African wildlife Interspecies transmission and emergence of novel viruses: lessons from bats and birds Bats as a continuing source of emerging infections in humans Fruit bats as reservoirs of Ebola virus Human Ebola outbreak resulting from direct exposure to fruit bats in Luebo, Democratic Republic of Congo Ebola virus antibodies in fruit bats Reston Ebolavirus antibodies in bats, the Philippines Serological evidence of ebolavirus infection in bats, China Coexistence of different genotypes in the same bat and serological characterization of Rousettus bat coronavirus HKU9 belonging to a novel Betacoronavirus subgroup Recent transmission of a novel alphacoronavirus, bat coronavirus HKU10, from Leschenault's rousettes to pomona leaf-nosed bats: first evidence of interspecies transmission of coronavirus between bats of different suborders Identification and complete genome analysis of three novel paramyxoviruses, Tuhoko virus 1, 2 and 3, in fruit bats from China Reston virus in domestic pigs in China Serological evidence of Ebola virus infection in Indonesian orangutans Current perspectives on the phylogeny of Filoviridae Characterization of filoviruses based on differences in structure and antigenicity of the virion glycoprotein A new Ebola virus nonstructural glycoprotein expressed through RNA editing Mutational analysis of the putative fusion domain of Ebola virus glycoprotein A new player in the puzzle of filovirus entry Ebola virus enters host cells by macropinocytosis and clathrin-mediated endocytosis Small molecule inhibitors reveal Niemann-Pick C1 is essential for Ebola virus infection Structural rearrangement of ebola virus VP40 begets multiple functions in the virus life cycle Recovery of infectious Ebola virus from complementary DNA: RNA editing of the GP gene and viral cytotoxicity Identification of the Ebola virus glycoprotein as the main viral determinant of vascular cell cytotoxicity and injury Ebola virus glycoprotein: proteolytic processing, acylation, cell tropism, and detection of neutralizing antibodies Antigenic subversion: a novel mechanism of host immune evasion by Ebola virus Distinct cellular interactions of secreted and transmembrane Ebola virus glycoproteins Evidence against Ebola virus sGP binding to human neutrophils by a specific receptor Effects of Ebola virus glycoproteins on endothelial cell activation and barrier function sGP serves as a structural protein in Ebola virus infection Molecular Basis for ebola virus VP35 Suppression of human dendritic cell maturation Ebola virus VP24 targets a unique NLS binding site on Karyopherin alpha 5 to Selectively compete with Nuclear Import of Phosphorylated STAT1 How Ebola and Marburg viruses battle the immune system Human fatal zaire ebola virus infection is associated with an aberrant innate immunity and with massive lymphocyte apoptosis Ebola haemorrhagic fever Analysis of human peripheral blood samples from fatal and nonfatal cases of Ebola (Sudan) hemorrhagic fever: cellular responses, virus load, and nitric oxide levels Pathogenesis of the viral hemorrhagic fevers Mechanisms underlying coagulation abnormalities in ebola hemorrhagic fever: overexpression of tissue factor in primate monocytes/ macrophages is a key event Host response dynamics following lethal infection of rhesus macaques with Zaire ebolavirus Transcriptional correlates of disease outcome in anticoagulant-treated non-human primates infected with ebolavirus Ebola hemorrhagic Fever: novel biomarker correlates of clinical outcome Human asymptomatic Ebola infection and strong inflammatory response Distinct patterns of IFITM-mediated restriction of filoviruses, SARS coronavirus, and influenza A virus Defective humoral responses and extensive intravascular apoptosis are associated with fatal outcome in Ebola virusinfected patients Persistent immune responses after Ebola virus infection Protective efficacy of neutralizing monoclonal antibodies in a nonhuman primate model of Ebola hemorrhagic fever Delayed treatment of Ebola virus infection with plant-derived monoclonal antibodies provides protection in rhesus macaques Successful treatment of ebola virus-infected cynomolgus macaques with monoclonal antibodies Reversion of advanced Ebola virus disease in nonhuman primates with ZMapp Therapeutic intervention of Ebola virus infection in rhesus macaques with the MB-003 monoclonal antibody cocktail Immune parameters correlate with protection against ebola virus infection in rodents and nonhuman primates Antibodies are necessary for rVSV/ZEBOV-GPmediated protection against lethal Ebola virus challenge in nonhuman primates Role of natural killer cells in innate protection against lethal ebola virus infection Induction of humoral and CD8þ T cell responses are required for protection against lethal Ebola virus infection Surfactant protein B gene polymorphism is associated with severe influenza A functional variation in CD55 increases the severity of 2009 pandemic H1N1 influenza A virus infection Host genetic diversity enables Ebola hemorrhagic fever pathogenesis and resistance Late ophthalmologic manifestations in survivors of the 1995 Ebola virus epidemic in Kikwit, Democratic Republic of the Congo What Obstetrician-Gynecologists should Know about ebola: a Perspective from the centers for disease control and prevention Rapid diagnosis of Ebola hemorrhagic fever by reverse transcription-PCR in an outbreak setting and assessment of patient viral load as a predictor of outcome Detection of Ebola virus in oral fluid specimens during outbreaks of Ebola virus hemorrhagic fever in the Republic of Congo UN Mission for Ebola Emergency Response (UNMEER) Limitations of the indirect immunofluorescence slide test for antibody screening in Africa Transmission dynamics and control of Ebola virus disease outbreak in Nigeria World Health Organization.


id: cord-021571-7kbq0v9w
author: Heath, Joan A.
title: Infections Acquired in the Nursery: Epidemiology and Control
date: 2009-05-19
extension: .txt
mime: text/plain
words: 21253
sentence: 665
flesch: 30
cache: cache/cord-021571-7kbq0v9w.txt
txt: txt/cord-021571-7kbq0v9w.txt
summary:
  Because control over birth weight-the most significant predictor of nosocomial infection risk-is limited, proper NICU customs, environment, and procedures (e.g., hand hygiene, antimicrobial usage, catheter-related practices, skin and cord care, visitation policies, unit design, and staffing) can reduce the risk for infection in the NICU. This chapter describes the epidemiology, etiology, and clinical characteristics of neonatal nosocomial infections as well as the methods required for effective infection prevention and control.


id: cord-017731-xzfo5jjq
author: Todd, Ewen C. D.
title: Foodborne Disease in the Middle East
date: 2016-11-25
extension: .txt
mime: text/plain
words: 25397
sentence: 908
flesch: 48
cache: cache/cord-017731-xzfo5jjq.txt
txt: txt/cord-017731-xzfo5jjq.txt
summary:
  key: cord-017731-xzfo5jjq authors: Todd, Ewen C. D. title: Foodborne Disease in the Middle East date: 2016-11-25 journal: Water, Energy & Food Sustainability in the Middle East DOI: 10.1007/978-3-319-48920-9_17 sha: doc_id: 17731 cord_uid: xzfo5jjq Food safety is a concern worldwide and according to the World Health Organization, developing countries are probably more at risk of foodborne illness because many of these, including those in the Middle East, have limited disease surveillance and prevention and control strategies. Research has been focused on microbial contamination of locally-sold foodstuffs and manager and employee knowledge of food safety and hygienic conditions in food preparation establishments.


id: cord-348840-s8wjg4ar
author: Cobrado, L.
title: High-touch surfaces: microbial neighbours at hand
date: 2017-06-25
extension: .txt
mime: text/plain
words: 5843
sentence: 188
flesch: 17
cache: cache/cord-348840-s8wjg4ar.txt
txt: txt/cord-348840-s8wjg4ar.txt
summary:
  Microbial pathogens most frequently involved in the contamination of hospital environmental surfaces are (methicillinresistant) Staphylococcus aureus (MRSA), vancomycinresistant enterococci (VRE), Clostridium difficile, multidrug resistant Gramme-negative bacilli (such as Pseudomonas, Acinetobacter and Enterobacteriaceae), Norovirus, Coronavirus and Candida species [6] [7] [8] [9] [10] . The aim of this manuscript is to review the role of hightouch surfaces in healthcare-associated infections, from the aetiology to strategies for surface cleaning and addressing preventive trends.


id: cord-334108-4ey725dv
author: Seymour, I.J.
title: Foodborne viruses and fresh produce
date: 2008-07-07
extension: .txt
mime: text/plain
words: 10246
sentence: 453
flesch: 46
cache: cache/cord-334108-4ey725dv.txt
txt: txt/cord-334108-4ey725dv.txt
summary:
  Salinity and pH do not appear to have a signi®cant direct effect on virus survival under conditions normally found in natural waters, but may have indirect effects by modifying interaction of viruses with particulates. Effect of chlorine treatment on infectivity of hepatitis A virus An outbreak of calicivirus associated with consumption of frozen raspberries Long-term survival of human rotavirus in raw and treated river water Role of infected food handler in hotel outbreak of Norwalk-like viral gastroenteritis: implications for control Frozen raspberries and hepatitis A A multifocal outbreak of hepatitis A traced to commercially distributed lettuce High levels of microbial contamination of vegetables irrigated with wastewater by the drip method Chemical disinfection of non-porous inanimate surfaces experimentally contaminated with four human pathogenic viruses Viruses, Parasites, Pathogens and HACCP Viruses, Parasites, Pathogens and HACCP Foodborne spread of hepatitis A: recent studies on virus survival, transfer and inactivation Acid stability of hepatitis A virus Review of sources of enteroviruses in the environment Small round structured viruses in environmental water samples Attachment of Escherichia coli O157:


id: cord-279255-v861kk0i
author: Dhama, Kuldeep
title: Coronavirus Disease 2019–COVID-19
date: 2020-06-24
extension: .txt
mime: text/plain
words: 23944
sentence: 827
flesch: 36
cache: cache/cord-279255-v861kk0i.txt
txt: txt/cord-279255-v861kk0i.txt
summary:
  Overlapping and discrete aspects of the pathology and pathogenesis of the emerging human pathogenic coronaviruses SARS-CoV, MERS-CoV, and 2019-nCoV Fusion mechanism of 2019-nCoV and fusion inhibitors targeting HR1 domain in spike protein Animal models for SARS and MERS coronaviruses Recent advances in the vaccine development against Middle East respiratory syndromecoronavirus Virology: SARS virus infection of cats and ferrets A live attenuated severe acute respiratory syndrome coronavirus is immunogenic and efficacious in golden Syrian hamsters Animal models and vaccines for SARS-CoV infection Infection with MERS-CoV causes lethal pneumonia in the common marmoset Vaccines for the prevention against the threat of MERS-CoV Molecular basis of coronavirus virulence and vaccine development Mice transgenic for human angiotensin-converting enzyme 2 provide a model for SARS coronavirus infection Genetically engineering a susceptible mouse model for MERS-CoV-induced acute respiratory distress syndrome Prospects for a MERS-CoV spike vaccine A mouse model for MERS coronavirus-induced acute respiratory distress syndrome Replicative capacity of MERS coronavirus in livestock cell lines Entry of human coronavirus NL63 into the cell China's response to a novel coronavirus stands in stark contrast to the 2002 SARS outbreak response Novel coronavirus is putting the whole world on alert Early epidemiological analysis of the coronavirus disease 2019 outbreak based on crowdsourced data: a population-level observational study Estimation of the transmission risk of the 2019-nCoV and its implication for public health interventions The mental health of medical workers in Wuhan, China dealing with the 2019 novel coronavirus The progress of 2019 novel coronavirus (2019-nCoV) event in China Nowcasting and forecasting the potential domestic and international spread of the 2019-nCoV outbreak originating in Wuhan, China: a modelling study Response to the emerging novel coronavirus outbreak Potential for global spread of a novel coronavirus from China Novel coronavirus, poor quarantine, and the risk of pandemic Novel Coronavirus outbreak in Wuhan, China, 2020: intense surveillance is vital for preventing sustained transmission in new locations Risk for transportation of 2019 novel coronavirus disease from Wuhan to other cities in China Infections without borders: a new coronavirus in Wuhan, China An interactive web-based dashboard to track COVID-19 in real time Limiting spread of COVID-19 from cruise ships-lessons to be learnt from Japan Clinical characteristics and intrauterine vertical transmission potential of COVID-19 infection in nine pregnant women: a retrospective review of medical records A case of 2019 novel coronavirus in a pregnant woman with preterm delivery Clinical features and obstetric and neonatal outcomes of pregnant patients with COVID-19 in Wuhan, China: a retrospective, single-centre, descriptive study A pregnant woman with COVID-19 in Central America Latin American Network of Coronavirus Disease 2019-COVID-19 Research (LANCOVID-19). CEPI to fund three programmes to develop vaccines against the novel coronavirus, nCoV-2019 Moderna announces funding award from CEPI to accelerate development of messenger RNA (mRNA) vaccine against novel coronavirus Novel inhibitors of severe acute respiratory syndrome coronavirus entry that act by three distinct mechanisms Treatment with interferon-␣2b and ribavirin improves outcome in MERS-CoV-infected rhesus macaques Middle East respiratory syndrome coronavirus (MERS-CoV): challenges in identifying its source and controlling its spread COVID-19, an emerging coronavirus infection: advances and prospects in designing and developing vaccines, immunotherapeutics, and therapeutics Potential antiviral therapeutics for 2019 novel coronavirus A novel coronavirus outbreak of global health concern Coronavirusesdrug discovery and therapeutic options Treatment with lopinavir/ritonavir or interferon-␤1b improves outcome of MERS-CoV infection in a nonhuman primate model of common Marmoset Treatment of Middle East respiratory syndrome with a combination of lopinavir-ritonavir and interferon-␤1b (MIRACLE trial): study protocol for a randomized controlled trial Clinical management of severe acute respiratory infection when novel coronavirus (nCoV) infection is suspected Clinical characteristics and therapeutic procedure for four cases with 2019 novel coronavirus pneumonia receiving combined Chinese and Western medicine treatment Remdesivir and chloroquine effectively inhibit the recently emerged novel coronavirus (2019-nCoV) in vitro Broad-spectrum antiviral GS-5734 inhibits both epidemic and zoonotic coronaviruses Chloroquine is a potent inhibitor of SARS coronavirus infection and spread Breakthrough: chloroquine phosphate has shown apparent efficacy in treatment of COVID-19 associated pneumonia in clinical studies Towards a solution to MERS: protective human monoclonal antibodies targeting different domains and functions of the MERS-coronavirus spike glycoprotein Characterization of novel monoclonal antibodies against MERScoronavirus spike protein Crossneutralization of SARS coronavirus-specific antibodies against bat SARS-like coronaviruses New coronavirus threat galvanizes scientists Potent binding of 2019 novel coronavirus spike protein by a SARS coronavirus-specific human monoclonal antibody Cell-based antiviral screening against coronaviruses: developing virus-specific and broad-spectrum inhibitors Passive immunotherapy with dromedary immune serum in an experimental animal model for Middle East respiratory syndrome coronavirus infection Potential interventions for novel coronavirus in China: a systemic review Human transbodies that interfere with the functions of Ebola virus VP35 protein in genome replication and transcription and innate immune antagonism Inhibitors of RAS might be a good choice for the therapy of COVID-19 pneumonia Screening of an FDA-approved compound library identifies four small-molecule inhibitors of Middle East respiratory syndrome coronavirus replication in cell culture


id: cord-022147-istz1iql
title: Procedures to Investigate Waterborne Illness
date: 2016-07-13
extension: .txt
mime: text/plain
words: 38236
sentence: 1644
flesch: 47
cache: cache/cord-022147-istz1iql.txt
txt: txt/cord-022147-istz1iql.txt
summary:
  Collecting clinical samples and water samples • Conducting an on-site investigation at the facility alleged to be responsible to determine the mode of contamination or process failure, e.g., low disinfectant level • Characterizing the etiologic agents by laboratory analysis using various typing schemes. Instruct the ill person to hold all clinical specimens and water samples until the health agency evaluates the epidemiological evidence and arranges, if necessary, to collect them.


id: cord-023767-rcv4pl0d
author: O’Ryan, Miguel L.
title: Microorganisms Responsible for Neonatal Diarrhea
date: 2009-05-19
extension: .txt
mime: text/plain
words: 45719
sentence: 1499
flesch: 29
cache: cache/cord-023767-rcv4pl0d.txt
txt: txt/cord-023767-rcv4pl0d.txt
summary:
  Several studies have suggested that EAEC is also a common cause of infant diarrhea in industrialized c~u n t Rotavirus particles have not been found in human milk or c o l o~t r u m .~~~~~~~~ Exposure of a newborn to rotavirus can result in asymptomatic infection or cause mild or severe gastro-Outbreaks with high attack rates as measured by rotavirus excretion have been described but the extent of symptomatic infection Severe rotavirus infection is seldom reported during the newborn period1203 but the extent of underreporting of severe disease, especially in the less developed areas of the world, has not been evaluated.


id: cord-276758-k2imddzr
author: Siegel, Jane D.
date: 2007-12-07
extension: .txt
mime: text/plain
words: 46244
sentence: 1735
flesch: 27
cache: cache/cord-276758-k2imddzr.txt
txt: txt/cord-276758-k2imddzr.txt
title:
  2007 Guideline for Isolation Precautions: Preventing Transmission of Infectious Agents in Health Care Settings

summary:
  Infection transmission risks are present in all hospital settings. 480, 481 Opportunites exist to conduct research in home care related to infection transmission risks.


# ent

id: cord-004586-i8tacj63
sid: 1
eid: 3
type: PERSON
entity:
  nosokomialer infektionen bei neonatologischen intensivpflegepatienten mit einem geburtsgewicht unter


id: cord-004586-i8tacj63
sid: 40
eid: 1
type: ORG
entity:
  aufgrund der erhöhten permeabilität und verletzlichkeit der haut nur so viel wie unbedingt nötig manipuliert werden (z. b. antisepsis vor invasiven prozeduren


id: cord-004586-i8tacj63
sid: 54
eid: 3
type: PRODUCT
entity:
  mutagenität und der klinisch relevanten gefahr von überempfindlichkeitsreaktionen nicht zur hautdesinfektion empfohlen


id: cord-004586-i8tacj63
sid: 55
eid: 6
type: PERSON
entity:
  haut-und schleimhautantiseptikum mit breiterem wirkungsspektrum als chlorhexidin und guter lokaler verträglichkeit


id: cord-004586-i8tacj63
sid: 61
eid: 2
type: ORG
entity:
  ® bietet klinikapotheken octenidin als grundsubstanz zur eigenen herstellung einer gebrauchsfertigen lösung


id: cord-004586-i8tacj63
sid: 74
eid: 2
type: PERSON
entity:
  insbesondere bei einer rötung des nabelrings ist nach entnahme eines abstrichs zur erregerdiagnostik ein antiseptikum indiziert


id: cord-004586-i8tacj63
sid: 121
eid: 2
type: ORG
entity:
  insertionsstelle von peripheren arterienkathetern aus infektiologischer sicht kann nicht gegeben werden


id: cord-004586-i8tacj63
sid: 188
eid: 1
type: ORG
entity:
  stehen die nachteile der schlechteren beurteilbarkeit der einführtiefe des nabelgefäßkatheters gegenüber.


id: cord-004586-i8tacj63
sid: 237
eid: 2
type: ORG
entity:
  der glycopeptide könnte durch den gezielten und restriktiven einsatz von vancomycin reduziert werden


id: cord-004586-i8tacj63
sid: 241
eid: 4
type: GPE
entity:
  können durch eine persistierende besiedlung der atemwege oder von dauerhaft eingesetzten hilfsmitteln


id: cord-004586-i8tacj63
sid: 282
eid: 2
type: ORG
entity:
  müssen mit desinfizierten händen und mit sterilisiertem oder mit einem umfassend viruzid wirksamen mittel desinfizierten instrumentarium


id: cord-004586-i8tacj63
sid: 302
eid: 4
type: ORG
entity:
  dvv) und der desinfektionsmittelkommission der deutschen gesellschaft für hygiene und mikrobiologie (dghm


id: cord-004586-i8tacj63
sid: 324
eid: 7
type: ORG
entity:
  der vaginalen hefepilz-kolonisation von schwangeren zur verhütung von kandidamykosen beim neugeborenen outbreak


id: cord-298372-4pw1y404
sid: 209
eid: 6
type: ORG
entity:
  events -sciencedirect phd institut de recherche biomedicale des armees departement de microbiologie et


id: cord-276758-k2imddzr
sid: 1391
eid: 1
type: ORG
entity:
  www.aana.com/news.aspx?ucnavmenu_tsmenutargetid5171& ucnavmenu_tsmenutargettype54&ucnavmenu_tsmenuid56& id51613


